Pregenerated sensors for OLFR663 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109806Ensembl transcript IDs: ENSMUST00000209914.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | ATTAAACCAAGGTCACTACCCATGACTGCCCATGCCAGGAAGAGCTaGTTAATGCTGTCGATCTTCCTGTCATCACAGGCAAGGCTAGTG | + |
Preference number: 5 (lower is better) Translates to: IKPRSLPMTAHARKS*LMLSIFLSSQARLV Trigger: CACTAGCCTTGCCTGTGATGACAGGAAGATCGACAGCATTAACCAGCTCTTCCTGGCATGGGCAGTCATGGGTAGTGACCTTGGTTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209914.2 |
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CDS CCA 72 bp | AGGTCACTACCCATGACTGCCCATGCCAGGAAGAGCTaGTTAATGCTGTCGATCTTCCTGTCATCACAGGCA | + |
Preference number: 6 (lower is better) Translates to: RSLPMTAHARKS*LMLSIFLSSQA Trigger: TGCCTGTGATGACAGGAAGATCGACAGCATTAACCAGCTCTTCCTGGCATGGGCAGTCATGGGTAGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209914.2 |
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CDS CAA 90 bp | GGCAAGGCTAGTGACCCCCGGGTTAGGACAAAAACAGTGGTTGATTaGATTCCGGGAACAGTAATTTCTCTGAGCAGCCAACACAGGTAC | + |
Preference number: 6 (lower is better) Translates to: GKASDPRVRTKTVVD*IPGTVISLSSQHRY Trigger: GTACCTGTGTTGGCTGCTCAGAGAAATTACTGTTCCCGGAATCAAATCAACCACTGTTTTTGTCCTAACCCGGGGGTCACTAGCCTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209914.2 |
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CDS TCA 72 bp | GGAACAGTAATTTCTCTGAGCAGCCAACACAGGTACTaGCATGGGAGCCACAAAATTTCTGAAGGCCATTAT | + |
Preference number: 6 (lower is better) Translates to: GTVISLSSQHRY*HGSHKISEGHY Trigger: ATAATGGCCTTCAGAAATTTTGTGGCTCCCATGTCAGTACCTGTGTTGGCTGCTCAGAGAAATTACTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209914.2 |