Pregenerated sensors for OLFR66 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058200Ensembl transcript IDs: ENSMUST00000079117.2, ENSMUST00000216303.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCCTGTGAGACTATGACAGTGCCTGGCAAATACAGAAGTGGATaGTCACAGTCATCTATTAGATGGAACACAGGGTCCCCAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMTVPGKYRSG*SQSSIRWNTGSPMK Trigger: CTTCATTGGGGACCCTGTGTTCCATCTAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGTCATAGTCTCACAGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR TCA 90 bp | CCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTaGCAAGACCCTGATATAGCTGTCTCCTGTGAGACTATGACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PTMCFLWLHMPTRFC*QDPDIAVSCETMTV Trigger: CACTGTCATAGTCTCACAGGAGACAGCTATATCAGGGTCTTGTCAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTGAACCCACCAGATTCTaGTGGAGACTTTCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLEPTRF*WRLSES Trigger: TGACTCTGAAAGTCTCCATCAGAATCTGGTGGGTTC...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR TCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGCTTTGCCATCTAATCTaGGGCAGAGGATCAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: HESYHVFSLVAYANKILLLCHLI*GRGSRS Trigger: ACTCCTTGATCCTCTGCCTCAGATTAGATGGCAAAG...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCGAGGATCAAGGAGTTTaGTATGAGATTCCATCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KRSAALLEEQQYKLTSTPEDQGV*YEIPSC Trigger: ACAAGATGGAATCTCATAGCAAACTCCTTGATCCTC...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCTTTACTGATGGACCTTaGGAATTAGAGAGTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: KRSAALLEEQQYKLTSTPFTDGP*ELESDC Trigger: ACAGTCACTCTCTAATTCCCAAGGTCCATCAGTAAA...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR TCA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCAAAGTCTCACCACAATaGCTGCCTAAACATAAGATC | + |
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Preference number: 2 (lower is better) Translates to: GLNHQSKKTHDGTCISSCKVSPQ*LPKHKI Trigger: GATCTTATGTTTAGGCAGTCATTGTGGTGAGACTTT...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGGGTCTGCAGCCCTATTaGAGGAACAACAATATAAAC | + |
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Preference number: 2 (lower is better) Translates to: HESYHVFSLVAYANKILLGLQPY*RNNNIN Trigger: GTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACC...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTTCCTATATTCCTTTCTaGAAGAAAGGTTGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLSYIPF*KKGWEG Trigger: TCCTTCCCAACCTTTCTTTCAGAAAGGAATATAGGA...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCGACAACTCAGGAACATaGAGAGCAGGAGAATTAGTC | + |
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Preference number: 2 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIDNSGT*RAGELV Trigger: GACTAATTCTCCTGCTCTCCATGTTCCTGAGTTGTC...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCAGAATGAGGGCTTGTTaGGAGGAGAGAAAATTGATT | + |
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Preference number: 2 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIRMRAC*EERKLI Trigger: AATCAATTTTCTCTCCTCCCAACAAGCCCTCATTCT...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CAA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCAGGAGACAGATTATCTaGCTTGGTTTAGCTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GLNHQSKKTHDGTCISSCRRQII*LGLAFL Trigger: GAGGAAAGCTAAACCAAGCAAGATAATCTGTCTCCT...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR TCA 72 bp | AATCTCAGAAACTATGCCCGGAAAGTCTCACCACAATaGCTGCCTAAACATAAGATCTACAAGGAAAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: NLRNYARKVSPQ*LPKHKIYKERS Trigger: ACTCCTTTCCTTGTAGATCTTATGTTTAGGCAGTCATTGTGGTGAGACTTTCCGGGCATAGTTTCTGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CAA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGTTTCTTCATTGTTCTTaGCCATCTAATCTGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: HESYHVFSLVAYANKILLFLHCS*PSNLRQ Trigger: CTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAA...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCATAAAGAATGAGGGCTaGTTGGGAGGAGAGAAAATT | + |
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Preference number: 3 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIIKNEG*LGGEKI Trigger: AATTTTCTCTCCTCCCAACAAGCCCTCATTCTTTAT...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR GCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCGAGCAGTGCTCCCAGTaGCATCTTCATCACCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KRSAALLEEQQYKLTSTPEQCSQ*HLHHPG Trigger: TCCAGGGTGATGAAGATGGCACTGGGAGCACTGCTC...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCGGACACCCAGCACTGTaGGCATCGTGGTTAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KRSAALLEEQQYKLTSTPGHPAL*ASWLVS Trigger: TGACACTAACCACGATGCCCACAGTGCTGGGTGTCC...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCACCAAAAGAGAGGCATaGTTGGGGGCACGATGGACA | + |
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Preference number: 4 (lower is better) Translates to: KRSAALLEEQQYKLTSTPTKREA*LGARWT Trigger: TGTCCATCGTGCCCCCAATCATGCCTCTCTTTTGGT...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCGCACTGTGGGCATCGTaGTTAGTGTCATCCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GLNHQSKKTHDGTCISSCALWAS*LVSSQG Trigger: ACCTTGGGATGACACTAACCACGATGCCCACAGTGC...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGTCTGCAGCCCTATTGGAGGAACAACAATATAAACTAACCAGTACCCCCTGCTTTCCAAACCTGTaGATGAAGGTCAGGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: KRSAALLEEQQYKLTSTPCFPNL*MKVRPI Trigger: GATTGGCCTGACCTTCATTCACAGGTTTGGAAAGCA...GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGTGTGCAATCTCCCTCTaGTTTAGCACCAGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: HESYHVFSLVAYANKILLCAISL*FSTRTP Trigger: GGGTGTCCTGGTGCTAAACCAGAGGGAGATTGCACA...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR GCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGCCCAAGGTCCATACTTaGCAGCACAGCCAAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: HESYHVFSLVAYANKILLPKVHT*QHSQEV Trigger: TACTTCTTGGCTGTGCTGGCAAGTATGGACCTTGGG...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR TCA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCGACACAGCTAATGTGTaGAACACAGGTGTTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GLNHQSKKTHDGTCISSCDTANV*NTGVER Trigger: TCTCTCAACACCTGTGTTTCACACATTAGCTGTGTC...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR TCA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTTTCCAAACCTGTGAATaGAGGTCAGGCCAATCACAG | + |
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Preference number: 4 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLFQTCE*RSGQSQ Trigger: CTGTGATTGGCCTGACCTTCATTCACAGGTTTGGAA...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR GCA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTAAATCCTCTGAGCAGTaGTCCCAGTGCCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLKSSEQ*SQCHLH Trigger: ATGAAGATGGCACTGGGAGCACTGCTCAGAGGATTT...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| 3UTR CAA 72 bp | AAAGTACTCAAGGAGCTAAAGAGGTCTGCAGCCCTATaGGAGGAACAACAATATAAACTAACCAGTACCCCC | + |
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Preference number: 4 (lower is better) Translates to: KVLKELKRSAAL*EEQQYKLTSTP Trigger: GGGGGTACTGGTTAGTTTATATTGTTGTTCCTCCAATAGGGCTGCAGACCTCTTTAGCTCCTTGAGTACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCGAAAGAACATGGGAATaGCAGTATGGGAACCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GLNHQSKKTHDGTCISSCERTWE*QYGNQK Trigger: CTTTTGGTTCCCATACTGCCATTCCCATGTTCTTTC...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGAAGTCCTACTGTGTTTaGACAGTAGACGGAGAACAC | + |
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Preference number: 4 (lower is better) Translates to: HESYHVFSLVAYANKILLKSYCV*TVDGEH Trigger: GTGTTCTCCGTCTACTGTCCAAACACAGTAGGACTT...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR GCA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTTGTAATGCAGTGGTGTaGAGATGGCAACAAATCGAT | + |
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Preference number: 4 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLCNAVV*RWQQID Trigger: ATCGATTTGTTGCCATCTGCACACCACTGCATTACA...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR GCA 90 bp | GGACTAAACCACCAATCAAAGAAAACACATGATGGGACTTGCATCTCTAGCTGCAGTAATGTCAGCACATaGCAGTTTCATGACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLNHQSKKTHDGTCISSCSNVST*QFHDIL Trigger: CAAGATGTCATGAAACTGGCATGTGCTGACATTACT...GCAGCTAGAGATGCAAGTCCCATCATGTGTTTTCTTTGATTGGTGGTTTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCAAAGAGAGGCATGATTaGGGGCACGATGGACACAAA | + |
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Preference number: 4 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIKERHD*GHDGHK Trigger: TTTGTGTCCATCGTGCCCCCAATCATGCCTCTCTTT...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCATCGATCATAAGACATaGCAAGCAAGACCCCCGATT | + |
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Preference number: 4 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIIDHKT*QARPPI Trigger: AATCGGGGGTCTTGCTTGCCATGTCTTATGATCGAT...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | CACGAGTCCTACCATGTGTTTTCTTTGGTTGCATATGCCAACAAGATTTTGCTGGATGGGGTTCATAAATaGAGGAAAGAGAAAGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: HESYHVFSLVAYANKILLDGVHK*RKEKVD Trigger: GTCTACTTTCTCTTTCCTCCATTTATGAACCCCATC...CAGCAAAATCTTGTTGGCATATGCAACCAAAGAAAACACATGGTAGGACTCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CCA 90 bp | ATAGTCAACCTATTTCTTCATTGTTCTTTGCCATCTAATCTGAGGCAGAGGATCAGAGTTGTAATGCAGTaGTGTGCAGATGGCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: IVNLFLHCSLPSNLRQRIRVVMQ*CADGNK Trigger: TTTGTTGCCATCTGCACACCACTGCATTACAACTCT...GATCCTCTGCCTCAGATTAGATGGCAAAGAACAATGAAGAAATAGGTTGACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS GCA 90 bp | GAGAGGCATGATTGGGGGCACGATGGACACAAATCCTCTGAGCAGTaGTCCCAGTGCCATCTTCATCACCCTGGAATTGGTAAGGATAGA | + |
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Preference number: 5 (lower is better) Translates to: ERHDWGHDGHKSSEQ*SQCHLHHPGIGKDR Trigger: TCTATCCTTACCAATTCCAGGGTGATGAAGATGGCACTGGGAGCACTGCTCAGAGGATTTGTGTCCATCGTGCCCCCAATCATGCCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079117.2 ENSMUST00000216303.2 |
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| CDS GCA 90 bp | GATTGGGGGCACGATGGACACAAATCCTCTGAGCAGTGCTCCCAGTaGCATCTTCATCACCCTGGAATTGGTAAGGATAGAGTTGTAATG | + |
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Preference number: 5 (lower is better) Translates to: DWGHDGHKSSEQCSQ*HLHHPGIGKDRVVM Trigger: CATTACAACTCTATCCTTACCAATTCCAGGGTGATGAAGATGGCACTGGGAGCACTGCTCAGAGGATTTGTGTCCATCGTGCCCCCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079117.2 ENSMUST00000216303.2 |
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| CDS-3UTR CAA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTTCCCAAGGTCCATACTaGCCAGCACAGCCAAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLSQGPY*PAQPRS Trigger: ACTTCTTGGCTGTGCTGGCAAGTATGGACCTTGGGA...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS-3UTR CAA 90 bp | TTGCCATCTAATCTGAGGCAGAGGATCAAGGAGTTTGCTATGAGATTCCATCTTAATGAAACAGGCCCCTaGTGCAATCTCCCTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LPSNLRQRIKEFAMRFHLNETGP*CNLPLV Trigger: AACCAGAGGGAGATTGCACAAGGGGCCTGTTTCATT...AAGATGGAATCTCATAGCAAACTCCTTGATCCTCTGCCTCAGATTAGATGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216303.2 |
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| CDS GCA 72 bp | GATTGGGGGCACGATGGACACAAATCCTCTGAGCAGTaGTCCCAGTGCCATCTTCATCACCCTGGAATTGGT | + |
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Preference number: 6 (lower is better) Translates to: DWGHDGHKSSEQ*SQCHLHHPGIG Trigger: ACCAATTCCAGGGTGATGAAGATGGCACTGGGAGCACTGCTCAGAGGATTTGTGTCCATCGTGCCCCCAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079117.2 ENSMUST00000216303.2 |
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