Pregenerated sensors for OLFR659 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073922Ensembl transcript IDs: ENSMUST00000098170.2, ENSMUST00000214986.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCATGAACAGAGCAGGTGAGATCTGGCCTTCTGATCAAAACAAATaGAAAGGGCAGAAGCTGGGTGGTATTGAGTCTGGACGCAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GMNRAGEIWPSDQNK*KGQKLGGIESGRSL Trigger: AAGACTGCGTCCAGACTCAATACCACCCAGCTTCTGCCCTTTGCATTTGTTTTGATCAGAAGGCCAGATCTCACCTGCTCTGTTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 90 bp | CCTAATTTGTGTAGGTGTTTGACTAGAGATTTCAGGGCATCTCATTaGCAGCTGCTATCTCCCTTGTCCACCTTATTCCCTGCAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: PNLCRCLTRDFRASH*QLLSPLSTLFPAAS Trigger: TGATGCTGCAGGGAATAAGGTGGACAAGGGAGATAGCAGCTGCCAATGAGATGCCCTGAAATCTCTAGTCAAACACCTACACAAATTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 90 bp | ACTTCCTGTTTGATCTTCAGTGTGGCTGTCGTCACTCCCTGTAACTaGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTTCCTAATTTG | + |
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Preference number: 1 (lower is better) Translates to: TSCLIFSVAVVTPCN*SVHFSTVFLRLPNL Trigger: CAAATTAGGAAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTTACAGGGAGTGACGACAGCCACACTGAAGATCAAACAGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 90 bp | CCTCACTACACAGGAAACAATACTCTTTCTTCCTGTTCATTCTCCTaGATCCTCTCAGGGTATTTTATTTGTTGTTATGACCAAAACCCC | + |
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Preference number: 1 (lower is better) Translates to: PHYTGNNTLSSCSFS*ILSGYFICCYDQNP Trigger: GGGGTTTTGGTCATAACAACAAATAAAATACCCTGAGAGGATCCAGGAGAATGAACAGGAAGAAAGAGTATTGTTTCCTGTGTAGTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR TCA 90 bp | TTTCTAGACAGTCCCACACAGGCAGATTCAGAGACTTTCTTTCAGTaGTTCTGTCAGATGATGATAATATTAAGCACCACATTCTACTTT | + |
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Preference number: 1 (lower is better) Translates to: FLDSPTQADSETFFQ*FCQMMIILSTTFYF Trigger: AAAGTAGAATGTGGTGCTTAATATTATCATCATCTGACAGAATCACTGAAAGAAAGTCTCTGAATCTGCCTGTGTGGGACTGTCTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR GCA 90 bp | AAAGTTATTTCTAACAAGAGTTCTGTTTCTCAATACTTAGAGGTTTaGAAAGAAACTTCTTCATTGCATCCTACAAGTAACCTGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: KVISNKSSVSQYLEV*KETSSLHPTSNLLG Trigger: GCCCAGCAGGTTACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAACAGAACTCTTGTTAGAAATAACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | TTGACTAGAGATTTCAGGGCATCTCATTGGCAGCTGCTATCTCCCTaGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LTRDFRASHWQLLSP*STLFPAASGGLHCV Trigger: AACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATAGCAGCTGCCAATGAGATGCCCTGAAATCTCTAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | TATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCAACCATGTGTTTGCCTaGTCTCCCTCTGCCTTATTC | + |
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Preference number: 2 (lower is better) Translates to: YLPCPPYSLQHQADCTVFNHVFA*SPSALF Trigger: GAATAAGGCAGAGGGAGATCAGGCAAACACATGGTT...GAACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | AATGCAAAGGGCAGAAGCTGGGTGGTATTGAGTCTGGACGCAGTCTaGTCAGACTGTTCAGTGAAGACTCTCTTGTCCTTCCCAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: NAKGRSWVVLSLDAV*SDCSVKTLLSFPGH Trigger: ATGTCCTGGGAAGGACAAGAGAGTCTTCACTGAACAGTCTGACAAGACTGCGTCCAGACTCAATACCACCCAGCTTCTGCCCTTTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | GGCCTTCTGATCAAAACAAATGCAAAGGGCAGAAGCTGGGTGGTATaGAGTCTGGACGCAGTCTTGTCAGACTGTTCAGTGAAGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: GLLIKTNAKGRSWVV*SLDAVLSDCSVKTL Trigger: GAGAGTCTTCACTGAACAGTCTGACAAGACTGCGTCCAGACTCAATACCACCCAGCTTCTGCCCTTTGCATTTGTTTTGATCAGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | TTGAGTCTGGACGCAGTCTTGTCAGACTGTTCAGTGAAGACTCTCTaGTCCTTCCCAGGACATATGCTTCTATGCCTGAGTGGTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: LSLDAVLSDCSVKTL*SFPGHMLLCLSGHL Trigger: CAAATGACCACTCAGGCATAGAAGCATATGTCCTGGGAAGGACAAGAGAGTCTTCACTGAACAGTCTGACAAGACTGCGTCCAGACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR GCA 90 bp | TATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCAAGTGTATGACCATTTaGGGACCAAGAATAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: YLPCPPYSLQHQADCTVFKCMTI*GPRIKH Trigger: GTGTTTTATTCTTGGTCCGCAAATGGTCATACACTT...GAACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | ACAATCAGGAAGCAAAGAGAGGTGACTACTCGCTCCCTGCTAAGTTaGTTTTTAATTAGGTTCAGGATGTTAGGCAATGGAGTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TIRKQREVTTRSLLS*FLIRFRMLGNGVVP Trigger: TGGGACCACTCCATTGCCTAACATCCTGAACCTAATTAAAAACAAACTTAGCAGGGAGCGAGTAGTCACCTCTCTTTGCTTCCTGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CCA 90 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTGCACTGATGATCTGGCTTCCTGTTCATTCTCCTaGATCCTCTCAGGGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: TMPYNWQQRLKFCTDDLASCSFS*ILSGYF Trigger: AAAATACCCTGAGAGGATCCAGGAGAATGAACAGGA...AGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | CATTTTTCCACTGTATTTTTAAGGCTTCCTAATTTGTGTAGGTGTTaGACTAGAGATTTCAGGGCATCTCATTGGCAGCTGCTATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HFSTVFLRLPNLCRC*TRDFRASHWQLLSP Trigger: GGGAGATAGCAGCTGCCAATGAGATGCCCTGAAATCTCTAGTCAAACACCTACACAAATTAGGAAGCCTTAAAAATACAGTGGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTGCACTGATGATCTGGCTGAGTTGAACGCAGTATaGCTTTTAAAGATGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: TMPYNWQQRLKFCTDDLAELNAV*LLKMRF Trigger: GAATCTCATCTTTAAAAGTCATACTGCGTTCAACTC...AGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTGGGGTACTGAGCTGCTaGATTCAGAAAGGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCGVLSC*IQKGSV Trigger: AACAGAACCTTTCTGAATTCAGCAGCTCAGTACCCC...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTAAGGGTCTGGGGTACTaGGCTGCTGAATTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SSVSQYLEVCKETSSLHPKGLGY*AAEFRK Trigger: CTTTCTGAATTCAGCAGCTCAGTACCCCAGACCCTT...AGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAACAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTGGTAAAGATAGGGCATaGACAGAGCAGGTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCGKDRA*TEQVRS Trigger: AGATCTCACCTGCTCTGTTCATGCCCTATCTTTACC...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTTTCAGGGCATCTCATTaGCAGCTGCTATCTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSFRASH*QLLSPL Trigger: CAAGGGAGATAGCAGCTGCCAATGAGATGCCCTGAA...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | AACTGGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTTCCTAATTaGTGTAGGTGTTTGACTAGAGATTTCAGGGCATCTCATTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NWSVHFSTVFLRLPN*CRCLTRDFRASHWQ Trigger: CTGCCAATGAGATGCCCTGAAATCTCTAGTCAAACACCTACACAAATTAGGAAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTCTTGGACACCTGATATaGCTTCCTGACTGCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSLGHLI*LPDCSS Trigger: TGAACTGCAGTCAGGAAGTCATATCAGGTGTCCAAG...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR GCA 90 bp | GTCGTCACTCCCTGTAACTGGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTTTGCATCAACTGCCTTTaGAATATCATTCTGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: VVTPCNWSVHFSTVFLRLCINCL*NIILTS Trigger: AGAAGTCAGAATGATATTGCAAAGGCAGTTGATGCA...AAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTTACAGGGAGTGACGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTGTCTGCAGGGGAATATaGGAGACTAAAGTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSVCRGI*ETKVFT Trigger: TGTGAAGACTTTAGTCTCTCATATTCCCCTGCAGAC...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTTCTGCTGCCACTGTATaGAACATTCTACCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSSAATV*NILPVF Trigger: GAAGACAGGTAGAATGTTGCATACAGTGGCAGCAGA...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 90 bp | AGTTCTGTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATaGCATCCTACAAGTAACCTGCTGGGCAAATTTCAGGACATAACT | + |
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Preference number: 2 (lower is better) Translates to: SSVSQYLEVCKETSS*HPTSNLLGKFQDIT Trigger: AGTTATGTCCTGAAATTTGCCCAGCAGGTTACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAACAGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR GCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTCATTTCTCAGTAGAGTaGATCAACTGCCTTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCHFSVE*INCLCN Trigger: ATTGCAAAGGCAGTTGATGCACTCTACTGAGAAATG...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTTCTCTCTTCTCATTCTaGTGCCACTGTATGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSSLFSF*CHCMQH Trigger: ATGTTGCATACAGTGGCAGCAGAATGAGAAGAGAGA...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTGTGAGAAAGCTGAAGTaGTGGACATGTTATTTATTC | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCVRKLK*WTCYLF Trigger: GAATAAATAACATGTCCATCACTTCAGCTTTCTCAC...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTATTTGTGTAGGTGTTTaGCTAGAGATTTCAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VSQYLEVCKETSSLHPTSICVGV*LEISGH Trigger: ATGCCCTGAAATCTCTAGTCAAACACCTACACAAAT...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTGTAGAGGACGAAAAATaGATAGAAGGCAGAATCATA | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCVEDEK*IEGRII Trigger: TATGATTCTGCCTTCTATTCATTTTTCGTCCTCTAC...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTCTTATGTTGTTGTATTaGGCAGTGTGTAGGATATTG | + |
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Preference number: 2 (lower is better) Translates to: NSTSTCCTDFLISFSCLCLMLLY*AVCRIL Trigger: CAATATCCTACACACTGCCCAATACAACAACATAAG...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | GGCCTTCTGATCAAAACAAATGCAAAGGGCAGAAGCTaGGTGGTATTGAGTCTGGACGCAGTCTTGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: GLLIKTNAKGRS*VVLSLDAVLSD Trigger: GTCTGACAAGACTGCGTCCAGACTCAATACCACCCAGCTTCTGCCCTTTGCATTTGTTTTGATCAGAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | CTATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCAGAAGATTCTGTTTTaGGTTCCTAGGTCCCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: LSPLSTLFPAASGGLHCVQKILF*VPRSQY Trigger: ATACTGGGACCTAGGAACCAAAAACAGAATCTTCTG...AACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR GCA 72 bp | AGAGCAGGTGAGATCTGGCCTTCTGATCAAAACAAATaGAAAGGGCAGAAGCTGGGTGGTATTGAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RAGEIWPSDQNK*KGQKLGGIESG Trigger: TCCAGACTCAATACCACCCAGCTTCTGCCCTTTGCATTTGTTTTGATCAGAAGGCCAGATCTCACCTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | TGTAGGTGTTTGACTAGAGATTTCAGGGCATCTCATTaGCAGCTGCTATCTCCCTTGTCCACCTTATTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CRCLTRDFRASH*QLLSPLSTLFP Trigger: AGGGAATAAGGTGGACAAGGGAGATAGCAGCTGCCAATGAGATGCCCTGAAATCTCTAGTCAAACACCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR TCA 72 bp | CTCTCTTGTCCTTCCCAGGACATATGCTTCTATGCCTaGGTGGTCATTTGCAAGGCTGAAGTTAAGTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: LSCPSQDICFYA*VVICKAEVKSK Trigger: TTTTGACTTAACTTCAGCCTTGCAAATGACCACTCAGGCATAGAAGCATATGTCCTGGGAAGGACAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR GCA 72 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTaGACTGATGATCTGGCTGTCTTCCATCCTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: TMPYNWQQRLKF*TDDLAVFHPQI Trigger: AATCTGAGGATGGAAGACAGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | TTGATCTTCAGTGTGGCTGTCGTCACTCCCTGTAACTaGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LIFSVAVVTPCN*SVHFSTVFLRL Trigger: AAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTTACAGGGAGTGACGACAGCCACACTGAAGATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTTTGGACCCTGTTTCTATTTTCCCTCTGACAAAGTTATTTCTAACAAGATTTCAGGGCATCTCATaGGCAGCTGCTATCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RLLDPVSIFPLTKLFLTRFQGIS*AAAISL Trigger: AAGGGAGATAGCAGCTGCCAATGAGATGCCCTGAAA...TCTTGTTAGAAATAACTTTGTCAGAGGGAAAATAGAAACAGGGTCCAAAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR GCA 72 bp | AACAAAATGGAGTGTTTCAAGTCTCTCTTCTCATTCTaGTGCCACTGTATGCAACATTCTACCTGTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: NKMECFKSLFSF*CHCMQHSTCLP Trigger: TGGAAGACAGGTAGAATGTTGCATACAGTGGCAGCAGAATGAGAAGAGAGACTTGAAACACTCCATTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | AAGGCTGAAGTTAAGTCAAAATACTGGTCCCACCAATaGGTGATTCTTTTTGTCATAAGGTCAAGGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: KAEVKSKYWSHQ*VILFVIRSRLC Trigger: ACAGAGCCTTGACCTTATGACAAAAAGAATCACCCATTGGTGGGACCAGTATTTTGACTTAACTTCAGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | GTGGTCATTTGCAAGGCTGAAGTTAAGTCAAAATACTaGTCCCACCAATGGGTGATTCTTTTTGTCATAAGG | + |
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Preference number: 3 (lower is better) Translates to: VVICKAEVKSKY*SHQWVILFVIR Trigger: CCTTATGACAAAAAGAATCACCCATTGGTGGGACCAGTATTTTGACTTAACTTCAGCCTTGCAAATGACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CCA 72 bp | AGAAATAATGTCCACAGTATGAGGCAGCTAGTTATATaGACACTCACAATCAGGAAGCAAAGAGAGGTGACT | + |
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Preference number: 3 (lower is better) Translates to: RNNVHSMRQLVI*TLTIRKQREVT Trigger: AGTCACCTCTCTTTGCTTCCTGATTGTGAGTGTCCATATAACTAGCTGCCTCATACTGTGGACATTATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTATACCAACTTCCTGTTaGATCTTCAGTGTGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VSQYLEVCKETSSLHPTSIPTSC*IFSVAV Trigger: GACAGCCACACTGAAGATCAAACAGGAAGTTGGTAT...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR TCA 72 bp | CTTCTAAACAACATCAGGACAAACCATGTGTTTGCCTaGTCTCCCTCTGCCTTATTCTTCTCTTCTAATAAA | + |
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Preference number: 3 (lower is better) Translates to: LLNNIRTNHVFA*SPSALFFSSNK Trigger: TTTATTAGAAGAGAAGAATAAGGCAGAGGGAGATCAGGCAAACACATGGTTTGTCCTGATGTTGTTTAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR GCA 72 bp | TTGATTCTAATGTTCACAACACACCTTTCTAAACTATaGCTTACAACTGGCAACAAAGGCTCAAGTTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LILMFTTHLSKL*LTTGNKGSSFA Trigger: TGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGTTTAGAAAGGTGTGTTGTGAACATTAGAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTTTGGACCCTGTTTCTATTTTCCCTCTGACAAAGTTATTTCTAACAAGACTCTCCTCCACATATTaGTTCATGGAAATTTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RLLDPVSIFPLTKLFLTRLSSTY*FMEICT Trigger: AGTACAAATTTCCATGAACAAATATGTGGAGGAGAG...TCTTGTTAGAAATAACTTTGTCAGAGGGAAAATAGAAACAGGGTCCAAAAGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTAAAGTGTATGACCATTaGCGGACCAAGAATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VSQYLEVCKETSSLHPTSKVYDH*RTKNKT Trigger: TGTTTTATTCTTGGTCCGCAAATGGTCATACACTTT...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCTGTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTTTAAGGCTTCCTAATTaGTGTAGGTGTTTGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVSQYLEVCKETSSLHPLRLPN*CRCLTR Trigger: TCTAGTCAAACACCTACACAAATTAGGAAGCCTTAA...AGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAACAGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR TCA 72 bp | ATTAAGCACCACATTCTACTTTGTAAAGGTTTCCACTaGACTATTCACTGGCTTATTTTCCAAGTATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IKHHILLCKGFH*TIHWLIFQVFL Trigger: CAGAAATACTTGGAAAATAAGCCAGTGAATAGTTCAGTGGAAACCTTTACAAAGTAGAATGTGGTGCTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | CTATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCTGCTGAAGATAAGCTaGCCACTGCTTTCAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: LSPLSTLFPAASGGLHCVLLKIS*PLLSGS Trigger: TGATCCTGAAAGCAGTGGTCAGCTTATCTTCAGCAG...AACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | GGCAGAAGCTGGGTGGTATTGAGTCTGGACGCAGTCTaGTCAGACTGTTCAGTGAAGACTCTCTTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GRSWVVLSLDAV*SDCSVKTLLSF Trigger: GAAGGACAAGAGAGTCTTCACTGAACAGTCTGACAAGACTGCGTCCAGACTCAATACCACCCAGCTTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR GCA 90 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTGCACTGATGATCTGGCTGATGGAGGGATGATGTaGCCCCCAAAGCGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TMPYNWQQRLKFCTDDLADGGMM*PPKRWE Trigger: TTCCCACCGCTTTGGGGGGCACATCATCCCTCCATC...AGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | TATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCTGTCTTCAAAGAAGATaGGGTAGAGGAGTCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: YLPCPPYSLQHQADCTVFCLQRR*GRGVHN Trigger: ATTGTGGACTCCTCTACCTCATCTTCTTTGAAGACA...GAACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | GACGCAGTCTTGTCAGACTGTTCAGTGAAGACTCTCTaGTCCTTCCCAGGACATATGCTTCTATGCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DAVLSDCSVKTL*SFPGHMLLCLS Trigger: ACTCAGGCATAGAAGCATATGTCCTGGGAAGGACAAGAGAGTCTTCACTGAACAGTCTGACAAGACTGCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | CTATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTGATGTCCTTAGAACCTaGAAAGATCCTTATGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LSPLSTLFPAASGGLHCVDVLRT*KDPYDT Trigger: TGTGTCATAAGGATCTTTTCAGGTTCTAAGGACATC...AACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CCA 90 bp | TATCTCCCTTGTCCACCTTATTCCCTGCAGCATCAGGCGGACTGCACTGTGTTCGAAACAAAAGAAGGCTaGGCTATAGGAGAAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLPCPPYSLQHQADCTVFETKEG*AIGENN Trigger: ATTGTTTTCTCCTATAGCCCAGCCTTCTTTTGTTTC...GAACACAGTGCAGTCCGCCTGATGCTGCAGGGAATAAGGTGGACAAGGGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR GCA 90 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTGCACTGATGATCTGGCTAAGGAAATCCAGATGTaGATTTCTTCCAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TMPYNWQQRLKFCTDDLAKEIQM*ISSRPG Trigger: CCCAGGCCTGGAAGAAATGCACATCTGGATTTCCTT...AGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | CATCAGTTACAGATACTTACAATACCAACTTCCTGTTaGATCTTCAGTGTGGCTGTCGTCACTCCCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQLQILTIPTSC*IFSVAVVTPCN Trigger: GTTACAGGGAGTGACGACAGCCACACTGAAGATCAAACAGGAAGTTGGTATTGTAAGTATCTGTAACTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | AAGCAAAGAGAGGTGACTACTCGCTCCCTGCTAAGTTaGTTTTTAATTAGGTTCAGGATGTTAGGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQREVTTRSLLS*FLIRFRMLGNG Trigger: TCCATTGCCTAACATCCTGAACCTAATTAAAAACAAACTTAGCAGGGAGCGAGTAGTCACCTCTCTTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR GCA 90 bp | GTCGTCACTCCCTGTAACTGGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTTCTGCAGAAGGGCAGATaGTTTGTGATGAAAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVTPCNWSVHFSTVFLRLLQKGR*FVMKIK Trigger: TTTGATTTTCATCACAAAGCATCTGCCCTTCTGCAG...AAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTTACAGGGAGTGACGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | AGGCTTTTGGACCCTGTTTCTATTTTCCCTCTGACAAAGTTATTTCTAACAAGATCCATTCAGAATAAATaGGACTGGGGTCACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLDPVSIFPLTKLFLTRSIQNK*DWGHLC Trigger: ACAGAGGTGACCCCAGTCTCATTTATTCTGAATGGA...TCTTGTTAGAAATAACTTTGTCAGAGGGAAAATAGAAACAGGGTCCAAAAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | AGGCTTTTGGACCCTGTTTCTATTTTCCCTCTGACAAAGTTATTTCTAACAAGATGGTGTAGGAGACTGTaGTGCACAAGATATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLDPVSIFPLTKLFLTRWCRRL*CTRYQS Trigger: GCTTTGATATCTTGTGCATCACAGTCTCCTACACCA...TCTTGTTAGAAATAACTTTGTCAGAGGGAAAATAGAAACAGGGTCCAAAAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR GCA 90 bp | GTCGTCACTCCCTGTAACTGGAGTGTGCATTTTTCCACTGTATTTTTAAGGCTTGGTGTATTAATATATTaGTTCTGCAGAAGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVTPCNWSVHFSTVFLRLGVLIY*FCRRAD Trigger: ATCTGCCCTTCTGCAGAAGCAATATATTAATACACC...AAGCCTTAAAAATACAGTGGAAAAATGCACACTCCAGTTACAGGGAGTGACGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | ACTGTATTTTTAAGGCTTCCTAATTTGTGTAGGTGTTaGACTAGAGATTTCAGGGCATCTCATTGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVFLRLPNLCRC*TRDFRASHWQL Trigger: CAGCTGCCAATGAGATGCCCTGAAATCTCTAGTCAAACACCTACACAAATTAGGAAGCCTTAAAAATACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTCAAGAAGTAGTACATTaGCCTGTGAAGGCTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQYLEVCKETSSLHPTSQEVVH*PVKAVF Trigger: GAAGACAGCCTTCACAGGTCAATGTACTACTTCTTG...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR TCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTCTGAAAAGATCCTTATaGCACAGTCTCGTATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSTSTCCTDFLISFSCLCLKRSL*HSLVSA Trigger: AGCAGATACGAGACTGTGTCATAAGGATCTTTTCAG...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CCA 90 bp | TTACACACATTTCTCAGTAGAGTGCATCAACTGCCTTTGCAATATCATTCTGACTGGATGAAGAACATCTaGACCAGACAATCAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTFLSRVHQLPLQYHSDWMKNI*TRQSVK Trigger: CTTTACTGATTGTCTGGTCCAGATGTTCTTCATCCA...GTCAGAATGATATTGCAAAGGCAGTTGATGCACTCTACTGAGAAATGTGTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | TCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATaGCATCCTACAAGTAACCTGCTGGGCAAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQYLEVCKETSS*HPTSNLLGKFQ Trigger: CTGAAATTTGCCCAGCAGGTTACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CCA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTCATTTCTTCCAGGCCTaGGATTCCATTCAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSTSTCCTDFLISFSCLCHFFQA*DSIQNK Trigger: TTTATTCTGAATGGAATCCCAGGCCTGGAAGAAATG...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | ATAGATTTTCAGAACTTTCTCAAAGTGTATGACCATTaGCGGACCAAGAATAAAACACATGAGCACATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDFQNFLKVYDH*RTKNKTHEHMG Trigger: ACCCATGTGCTCATGTGTTTTATTCTTGGTCCGCAAATGGTCATACACTTTGAGAAAGTTCTGAAAATCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| 3UTR CAA 72 bp | GTGCATTTTTCCACTGTATTTTTAAGGCTTCCTAATTaGTGTAGGTGTTTGACTAGAGATTTCAGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VHFSTVFLRLPN*CRCLTRDFRAS Trigger: AGATGCCCTGAAATCTCTAGTCAAACACCTACACAAATTAGGAAGCCTTAAAAATACAGTGGAAAAATGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR GCA 90 bp | AGTTCTGTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTTTAATATATTGCTTCTaGAGAAGGGCAGATGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSQYLEVCKETSSLHPLIYCF*RRADAL Trigger: CAAAGCATCTGCCCTTCTGCAGAAGCAATATATTAA...AGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAACAGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CAA 90 bp | ACTATGCCTTACAACTGGCAACAAAGGCTCAAGTTTTGCACTGATGATCTGGCTTGGTGTATTAATATATaGCTTCTGCAGAAGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TMPYNWQQRLKFCTDDLAWCINI*LLQKGR Trigger: TCTGCCCTTCTGCAGAAGCAATATATTAATACACCA...AGCCAGATCATCAGTGCAAAACTTGAGCCTTTGTTGCCAGTTGTAAGGCATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTCAATACTTAGAGGTTTGCAAAGAAACTTCTTCATTGCATCCTACAAGTCCAAGAAGTAGTACATaGACCTGTGAAGGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSQYLEVCKETSSLHPTSPRSST*TCEGCL Trigger: AAGACAGCCTTCACAGGTCAATGTACTACTTCTTGG...ACTTGTAGGATGCAATGAAGAAGTTTCTTTGCAAACCTCTAAGTATTGAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS-3UTR CAA 90 bp | AATTCCACTTCTACATGCTGTACTGACTTCCTTATTTCATTCAGCTGTTTGTGTCATATGCTGTGGGATTaGATGTCCTTAGAACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSTSTCCTDFLISFSCLCHMLWD*MSLEPE Trigger: TTCAGGTTCTAAGGACATCAAATCCCACAGCATATG...ACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGAAGTGGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214986.2 |
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| CDS GCA 72 bp | CACCACAGCTCTCAAGAATGTAGCAAGGCCAGCTTTTaGAATGACAGGATTGGTGAGGATAGTGGAGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HHSSQECSKASF*NDRIGEDSGVV Trigger: CACTACTCCACTATCCTCACCAATCCTGTCATTGCAAAAGCTGGCCTTGCTACATTCTTGAGAGCTGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098170.2 ENSMUST00000214986.2 |
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| CDS TCA 72 bp | AATGTAGAACCAGAAGATACAGAGAGTTTTGGGTATTaGAGCACTGCACATGACAAGGTCTGTAAGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NVEPEDTESFGY*STAHDKVCKGK Trigger: CTTTCCCTTACAGACCTTGTCATGTGCAGTGCTTCAATACCCAAAACTCTCTGTATCTTCTGGTTCTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098170.2 ENSMUST00000214986.2 |
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