Pregenerated sensors for OLFR658 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070421Ensembl transcript IDs: ENSMUST00000089296.3, ENSMUST00000210641.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATATAGTCAGGGGAAGCTaGGTGAGCTTTCCAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: TEGVLALWFLQSSHPIFHIVRGS*VSFPEM Trigger: CATTTCTGGAAAGCTCACCCAGCTTCCCCTGACTAT...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATTTGCATCACAGGGGTTaGACACCCTGTAGTGACATA | + |
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Preference number: 2 (lower is better) Translates to: TEGVLALWFLQSSHPIFHLHHRG*TPCSDI Trigger: TATGTCACTACAGGGTGTCCAACCCCTGTGATGCAA...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATCTGCAGTCGATAAATTaGGTTAAAATCCTCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: TEGVLALWFLQSSHPIFHLQSIN*VKILKL Trigger: AAGCTTGAGGATTTTAACTCAATTTATCGACTGCAG...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATATATCCAGTGTCTTTTaGACAGTTTTGGATCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TEGVLALWFLQSSHPIFHISSVF*TVLDLG Trigger: ACCAAGATCCAAAACTGTTCAAAAGACACTGGATAT...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGAATAGTCAGGGGAAGCTaGGTGAGCTTTCCAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: SFIHFSLCSVSETWPSHRIVRGS*VSFPEM Trigger: CATTTCTGGAAAGCTCACCCAGCTTCCCCTGACTAT...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATTCTTTTGAACAGTTTTaGATCTTGGTAATAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TEGVLALWFLQSSHPIFHSFEQF*ILVIVS Trigger: GGAGACTATTACCAAGATCCAAAACTGTTCAAAAGA...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACGGTGTCCTGGCCCTCTaGTTCTTACAATCTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNGVLAL*FLQSSH Trigger: GTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACC...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACTTGCATCACAGGGGTTaGACACCCTGTAGTGACATA | + |
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Preference number: 2 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNLHHRG*TPCSDI Trigger: TATGTCACTACAGGGTGTCCAACCCCTGTGATGCAA...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACATATCCAGTGTCTTTTaGACAGTTTTGGATCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNISSVF*TVLDLG Trigger: ACCAAGATCCAAAACTGTTCAAAAGACACTGGATAT...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACCTTAGGGATATAAGTTaGAATTTAGTTGCATCACAG | + |
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Preference number: 2 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNLRDIS*NLVASQ Trigger: CTGTGATGCAACTAAATTGCAACTTATATCCCTAAG...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATATCTTTAAGCCTGCCTaGAAGGAAATGGGACAGTTA | + |
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Preference number: 3 (lower is better) Translates to: TEGVLALWFLQSSHPIFHIFKPA*KEMGQL Trigger: TAACTGTCCCATTTCCTTCAAGGCAGGCTTAAAGAT...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR TCA 72 bp | GGTTGGACACCCTGTAGTGACATATCCAGTGTCTTTTaGACAGTTTTGGATCTTGGTAATAGTCTCCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GWTPCSDISSVF*TVLDLGNSLQH Trigger: GTGCTGGAGACTATTACCAAGATCCAAAACTGTTCAAAAGACACTGGATATGTCACTACAGGGTGTCCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CAA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGGGAAGAAAGAAGTATTaGAAAAACAGGGGCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: ELALILDCMIFKPALKEMGRKKY*KNRGFV Trigger: TACAAAGCCCCTGTTTTTCAAATACTTCTTTCTTCC...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR CCA 72 bp | ACAAAGTACTATTTAACAGAAGGTGTCCTGGCCCTCTaGTTCTTACAATCTTCCCACCCAATTTTCCATTAT | + |
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Preference number: 3 (lower is better) Translates to: TKYYLTEGVLAL*FLQSSHPIFHY Trigger: ATAATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGTTAAATAGTACTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR TCA 72 bp | GCCTTGAAGGAAATGGGACAGTTAATTGTTCTGCTGTaGAATAATTATAACAGTGTCTTGGATAGAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALKEMGQLIVLL*NNYNSVLDREA Trigger: GGCTTCTCTATCCAAGACACTGTTATAATTATTTCACAGCAGAACAATTAACTGTCCCATTTCCTTCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACCATATCCAGTGTCTTTaGAACAGTTTTGGATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNHIQCL*NSFGSW Trigger: CCAAGATCCAAAACTGTTCAAAAGACACTGGATATG...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR GCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATCCCCATCATAGCCACTaGATACATGGAACAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TEGVLALWFLQSSHPIFHPHHSH*IHGTER Trigger: CCTTTCTGTTCCATGTATGCAGTGGCTATGATGGGG...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGCGCCCCTCAGGAAGGTaGCTAACCCAATCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ELALILDCMIFKPALKEMRPSGR*LTQSWQ Trigger: TTGCCAAGATTGGGTTAGCCACCTTCCTGAGGGGCG...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR TCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGACTGCTGATGATAAGCTaGCCACTGCCCTCAGAATCA | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHRLLMIS*PLPSES Trigger: TGATTCTGAGGGCAGTGGTCAGCTTATCATCAGCAG...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATCTGAAAGAATCCTTATaGCACAGTCTCGTATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TEGVLALWFLQSSHPIFHLKESL*HSLVSV Trigger: AACAGATACGAGACTGTGTCATAAGGATTCTTTCAG...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR TCA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGAAATGGCATTCACCTTaGCATTGCCACAGGACAACT | + |
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Preference number: 4 (lower is better) Translates to: ELALILDCMIFKPALKEMKWHSP*HCHRTT Trigger: AGTTGTCCTGTGGCAATGTCAAGGTGAATGCCATTT...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR GCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACGATGGAGGTATTGTGTaGCCCCCAAAGCGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNDGGIV*PPKRWE Trigger: TTCCCACCGCTTTGGGGGGCACACAATACCTCCATC...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR TCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGAAAATGGCATTCACCTTaGCATTGCCACAGGACAACT | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHRKWHSP*HCHRTT Trigger: AGTTGTCCTGTGGCAATGTCAAGGTGAATGCCATTT...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGACAGAACAAAGGAAGCTaGGGTCAGATCTGTGCTATT | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHRQNKGS*GQICAI Trigger: AATAGCACAGATCTGACCCCAGCTTCCTTTGTTCTG...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR GCA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGTATGGTTTATTATATTaGCTCGACAGTAGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ELALILDCMIFKPALKEMYGLLY*LDSRVG Trigger: GCCTACCCTACTGTCGAGGCAATATAATAAACCATA...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR GCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACCCCCATCATAGCCACTaGATACATGGAACAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNPHHSH*IHGTER Trigger: CCTTTCTGTTCCATGTATGCAGTGGCTATGATGGGG...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGCTAAAAAGTAGTACATaGGTCTGTGTAAGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: ELALILDCMIFKPALKEMLKSST*VCVRNP Trigger: AGGATTCCTTACACAGACCCATGTACTACTTTTTAG...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGAGAAGGAAAAGAAGGCTaGGCTATAGGAGAAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHREGKEG*AIGENN Trigger: ATTGTTTTCTCCTATAGCCCAGCCTTCTTTTCCTTC...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR TCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGACAAATCCAATTTCTTTaGGATGAAACCAGAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHRQIQFL*DETRRC Trigger: GCATCTTCTGGTTTCATCTCAAAGAAATTGGATTTG...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACCAGAACAAAGGAAGCTaGGGTCAGATCTGTGCTATT | + |
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Preference number: 4 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNQNKGS*GQICAI Trigger: AATAGCACAGATCTGACCCCAGCTTCCTTTGTTCTG...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | AGCTTTATCCATTTTTCATTGTGTTCTGTCAGTGAAACCTGGCCATCCCATAGACTAAAAAGTAGTACATaGGTCTGTGTAAGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SFIHFSLCSVSETWPSHRLKSST*VCVRNP Trigger: AGGATTCCTTACACAGACCCATGTACTACTTTTTAG...TCTATGGGATGGCCAGGTTTCACTGACAGAACACAATGAAAAATGGATAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR GCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACTATGGTTTATTATATTaGCTCGACAGTAGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNYGLLY*LDSRVG Trigger: GCCTACCCTACTGTCGAGGCAATATAATAAACCATA...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CCA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACGAAGGAAAAGAAGGCTaGGCTATAGGAGAAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNEGKEG*AIGENN Trigger: ATTGTTTTCTCCTATAGCCCAGCCTTCTTTTCCTTC...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATAAGATGCACAGGGTTTaGGGGATTGTACTAGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TEGVLALWFLQSSHPIFHKMHRV*GIVLEH Trigger: GTGCTCTAGTACAATCCCCAAAACCCTGTGCATCTT...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CAA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGGCATTCACCTTGACATaGCCACAGGACAACTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ELALILDCMIFKPALKEMAFTLT*PQDNLA Trigger: AGCCAAGTTGTCCTGTGGCAATGTCAAGGTGAATGC...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGTGTCCTGGCCCTCTGGTTCTTACAATCTTCCCACCCAATTTTCCATCTGTTAGAGAAAGCATaGCTAAAAAGTAGTACATGG | + |
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Preference number: 5 (lower is better) Translates to: TEGVLALWFLQSSHPIFHLLEKA*LKSSTW Trigger: CCATGTACTACTTTTTAGCAATGCTTTCTCTAACAG...ATGGAAAATTGGGTGGGAAGATTGTAAGAACCAGAGGGCCAGGACACCTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CAA 90 bp | GAATTAGCTCTCATTCTGGACTGCATGATCTTTAAGCCTGCCTTGAAGGAAATGCTGTTAGAGAAAGCATaGCTAAAAAGTAGTACATGG | + |
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Preference number: 5 (lower is better) Translates to: ELALILDCMIFKPALKEMLLEKA*LKSSTW Trigger: CCATGTACTACTTTTTAGCAATGCTTTCTCTAACAG...CATTTCCTTCAAGGCAGGCTTAAAGATCATGCAGTCCAGAATGAGAGCTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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| CDS-3UTR CAA 90 bp | ACTCTTAGGGTTTCATATGTTCAGCTTCCTTGTGTCTACAAAGTACTATTTAACAAGATGCACAGGGTTTaGGGGATTGTACTAGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TLRVSYVQLPCVYKVLFNKMHRV*GIVLEH Trigger: GTGCTCTAGTACAATCCCCAAAACCCTGTGCATCTT...GTTAAATAGTACTTTGTAGACACAAGGAAGCTGAACATATGAAACCCTAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089296.3 ENSMUST00000210641.2 |
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