Pregenerated sensors for OLFR655 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051182Ensembl transcript IDs: ENSMUST00000057385.5, ENSMUST00000215538.2, ENSMUST00000216750.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGACACTCCAGAAGAGAGAGTCAGATCTCATTACGGATGGTTATaGGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEERVRSHYGWL*ATMWLLGFELLTFG Trigger: TCCAAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCCGTAATGAGATCTGACTCTCTCTTCTGGAGTGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR CCA 90 bp | TCCATAATATCCACAGTTTATCAGGAGACATTACTAGATCTTGGGTaGTTGTCAAAGGTCTCAGATAGCCTCGTCATTTATCAAGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: SIISTVYQETLLDLG*LSKVSDSLVIYQVD Trigger: ATCAACTTGATAAATGACGAGGCTATCTGAGACCTTTGACAACCACCCAAGATCTAGTAATGTCTCCTGATAAACTGTGGATATTATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAGACATGACATTTGAGACCACTCTTTTGTaGTCCTATACTTTCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: SQVLLPTEPSHQPLDMTFETTLL*SYTFHN Trigger: ATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTC...AAATGTCATGTCTAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCACAGGAGTATCTTGAATTGTTACTCTAGACAGTGTGACTTAGTTTGCGACATTACTAGATCTTaGGTGGTTGTCAAAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PSHRSILNCYSRQCDLVCDITRS*VVVKGL Trigger: GAGACCTTTGACAACCACCCAAGATCTAGTAATGTC...GCAAACTAAGTCACACTGTCTAGAGTAACAATTCAAGATACTCCTGTGAGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR CAA 90 bp | ATAATATCCACAGTTTATCAGGAGACATTACTAGATCTTGGGTGGTaGTCAAAGGTCTCAGATAGCCTCGTCATTTATCAAGTTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: IISTVYQETLLDLGW*SKVSDSLVIYQVDG Trigger: CCCATCAACTTGATAAATGACGAGGCTATCTGAGACCTTTGACAACCACCCAAGATCTAGTAATGTCTCCTGATAAACTGTGGATATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTCACAGGAGTATCTTGAATTGTTACTCTAGACAGTGTGACTTAGTTTGCATCCTGACTATACATTaGATACATACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: PSHRSILNCYSRQCDLVCILTIH*IHTHTH Trigger: GTGTGTGTGTGTATGTATGCAATGTATAGTCAGGAT...GCAAACTAAGTCACACTGTCTAGAGTAACAATTCAAGATACTCCTGTGAGAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTATCACTAGATCTTGGGTGGTaGTCAAAGGTCTCAGATAGC | + |
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Preference number: 3 (lower is better) Translates to: GETTLLWSYTFHNIHSLSLDLGW*SKVSDS Trigger: GCTATCTGAGACCTTTGACAACCACCCAAGATCTAG...TGATAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR CCA 72 bp | TCCACAGTTTATCAGGAGACATTACTAGATCTTGGGTaGTTGTCAAAGGTCTCAGATAGCCTCGTCATTTAT | + |
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Preference number: 3 (lower is better) Translates to: STVYQETLLDLG*LSKVSDSLVIY Trigger: ATAAATGACGAGGCTATCTGAGACCTTTGACAACCACCCAAGATCTAGTAATGTCTCCTGATAAACTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR TCA 72 bp | AGTCACAATGAGCTGAGTAATTACTCTTCAGTTTCCTaGGCGGTTATCATAAAGAAGGATCCAGTGAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: SHNELSNYSSVS*AVIIKKDPVRN Trigger: GTTTCTCACTGGATCCTTCTTTATGATAACCGCTCAGGAAACTGAAGAGTAATTACTCAGCTCATTGTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAGACATGACATTTGAGAGCCACAAGTGTTaGGATTCTAAGCCGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: SQVLLPTEPSHQPLDMTFESHKC*DSKPGT Trigger: AGTGCCCGGCTTAGAATCCCAACACTTGTGGCTCTC...AAATGTCATGTCTAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAGACATGACATTTCCACACTCTGCAGGATaGAGACATACGAGAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: SQVLLPTEPSHQPLDMTFPHSAG*RHTRNQ Trigger: TTGGTTTCTCGTATGTCTTCATCCTGCAGAGTGTGG...AAATGTCATGTCTAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | AGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAGACATGACATTTAGAATAACAAAGAGGTaGGCTGAGCATGTATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SQVLLPTEPSHQPLDMTFRITKR*AEHVLR Trigger: CCTCAATACATGCTCAGCCCACCTCTTTGTTATTCT...AAATGTCATGTCTAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR TCA 90 bp | GGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTATCAGGCCGATGCGGTGGGTaGTGGATGAAAACAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GETTLLWSYTFHNIHSLSGRCGG*WMKTVQ Trigger: CTGCACTGTTTTCATCCATCACCCACCGCATCGGCC...TGATAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | TGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTATGGTGGCCGATGCGGTaGGTGATGGATGAAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: WGETTLLWSYTFHNIHSLWWPMR*VMDENS Trigger: ACTGTTTTCATCCATCACCCACCGCATCGGCCACCA...TAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR TCA 90 bp | CCCTCTCACAGGAGTATCTTGAATTGTTACTCTAGACAGTGTGACTTAGTTTGCCCACACTCTGCAGGATaGAGACATACGAGAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: PSHRSILNCYSRQCDLVCPHSAG*RHTRNQ Trigger: TTGGTTTCTCGTATGTCTTCATCCTGCAGAGTGTGG...GCAAACTAAGTCACACTGTCTAGAGTAACAATTCAAGATACTCCTGTGAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | AATCCTGACTATACATTGCATACATACACACACACACACACACACACACACATTGAGAGCCACAAGTGTTaGGATTCTAAGCCGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: NPDYTLHTYTHTHTHTHIESHKC*DSKPGT Trigger: AGTGCCCGGCTTAGAATCCCAACACTTGTGGCTCTC...AATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGCAATGTATAGTCAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | AAATGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTAATGTGAGCATGAGGTaGAATATGGTGGCCGATGCG | + |
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Preference number: 4 (lower is better) Translates to: KWGETTLLWSYTFHNIHSNVSMR*NMVADA Trigger: CGCATCGGCCACCATATTCCACCTCATGCTCACATT...ACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR GCA 90 bp | AGGTCTCAGATAGCCTCGTCATTTATCAAGTTGATGGGTTATTACAGCTATTCAAGGCGTACCACACTCTaGAGGATGAAGACATACGAG | + |
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Preference number: 4 (lower is better) Translates to: RSQIASSFIKLMGYYSYSRRTTL*RMKTYE Trigger: CTCGTATGTCTTCATCCTGCAGAGTGTGGTACGCCT...TGAATAGCTGTAATAACCCATCAACTTGATAAATGACGAGGCTATCTGAGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR GCA 90 bp | AATCCTGACTATACATTGCATACATACACACACACACACACACACACACACATTAGGCGTACCACACTCTaGAGGATGAAGACATACGAG | + |
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Preference number: 4 (lower is better) Translates to: NPDYTLHTYTHTHTHTHIRRTTL*RMKTYE Trigger: CTCGTATGTCTTCATCCTGCAGAGTGTGGTACGCCT...AATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGCAATGTATAGTCAGGATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | GCCTCGTCATTTATCAAGTTGATGGGTTATTACAGCTATTCACATCGTATAAAGTGGTGGCCGATGCGGTaGGTGATGGATGAAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: ASSFIKLMGYYSYSHRIKWWPMR*VMDENS Trigger: ACTGTTTTCATCCATCACCCACCGCATCGGCCACCA...CTTTATACGATGTGAATAGCTGTAATAACCCATCAACTTGATAAATGACGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR TCA 90 bp | TGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTAAGATACATTGGTGTGTaGAGTGTGGGCTCTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: WGETTLLWSYTFHNIHSLRYIGV*SVGSVI Trigger: TATCACAGAGCCCACACTTCACACACCAATGTATCT...TAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | AATCCTGACTATACATTGCATACATACACACACACACACACACACACACACATTATCTGCACAAGCATTTaGCCACTCTGTCCCGTATCT | + |
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Preference number: 4 (lower is better) Translates to: NPDYTLHTYTHTHTHTHIICTSI*PLCPVS Trigger: AGATACGGGACAGAGTGGCCAAATGCTTGTGCAGAT...AATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGCAATGTATAGTCAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | TTGTCAAAGGTCTCAGATAGCCTCGTCATTTATCAAGTTGATGGGTTATTACAGATCTGCACAAGCATTTaGCCACTCTGTCCCGTATCT | + |
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Preference number: 4 (lower is better) Translates to: LSKVSDSLVIYQVDGLLQICTSI*PLCPVS Trigger: AGATACGGGACAGAGTGGCCAAATGCTTGTGCAGAT...CTGTAATAACCCATCAACTTGATAAATGACGAGGCTATCTGAGACCTTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR TCA 90 bp | TTGTCAAAGGTCTCAGATAGCCTCGTCATTTATCAAGTTGATGGGTTATTACAGAGATACATTGGTGTGTaGAGTGTGGGCTCTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: LSKVSDSLVIYQVDGLLQRYIGV*SVGSVI Trigger: TATCACAGAGCCCACACTTCACACACCAATGTATCT...CTGTAATAACCCATCAACTTGATAAATGACGAGGCTATCTGAGACCTTTGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | GGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTATCAGAGCATAGAAGTGAATaGAACAGAGAGCCACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GETTLLWSYTFHNIHSLSEHRSE*NREPQV Trigger: CACTTGTGGCTCTCTGTTCCATTCACTTCTATGCTC...TGATAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| 3UTR CAA 72 bp | ACAGTTTATCAGGAGACATTACTAGATCTTGGGTGGTaGTCAAAGGTCTCAGATAGCCTCGTCATTTATCAA | + |
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Preference number: 4 (lower is better) Translates to: TVYQETLLDLGW*SKVSDSLVIYQ Trigger: TTGATAAATGACGAGGCTATCTGAGACCTTTGACAACCACCCAAGATCTAGTAATGTCTCCTGATAAACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CCA 90 bp | GCCTCGTCATTTATCAAGTTGATGGGTTATTACAGCTATTCACATCGTATAAAGAGAATAACAAAGAGGTaGGCTGAGCATGTATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASSFIKLMGYYSYSHRIKRITKR*AEHVLR Trigger: CCTCAATACATGCTCAGCCCACCTCTTTGTTATTCT...CTTTATACGATGTGAATAGCTGTAATAACCCATCAACTTGATAAATGACGAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS TCA 90 bp | AGGTCAGCCACCATCAGCAGGGCCAGGAGCAGATACATTGGTGTGTaGAGTGTGGGCTCTGTGATAACCAAGAAGAGGATAGCACCATTG | + |
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Preference number: 5 (lower is better) Translates to: RSATISRARSRYIGV*SVGSVITKKRIAPL Trigger: CAATGGTGCTATCCTCTTCTTGGTTATCACAGAGCCCACACTTCACACACCAATGTATCTGCTCCTGGCCCTGCTGATGGTGGCTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CCA 90 bp | AGAGATGAGGTCAGCCACCATCAGCAGGGCCAGGAGCAGATACATTaGTGTGTGAAGTGTGGGCTCTGTGATAACCAAGAAGAGGATAGC | + |
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Preference number: 5 (lower is better) Translates to: RDEVSHHQQGQEQIH*CVKCGLCDNQEEDS Trigger: GCTATCCTCTTCTTGGTTATCACAGAGCCCACACTTCACACACCAATGTATCTGCTCCTGGCCCTGCTGATGGTGGCTGACCTCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCTAGACATGACATTTAAGAGGCACAGGACCTaGGGCACAAGAGCTAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SQVLLPTEPSHQPLDMTFKRHRT*GTRARV Trigger: TACTCTAGCTCTTGTGCCCAAGGTCCTGTGCCTCTT...AAATGTCATGTCTAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS GCA 90 bp | AGGGCTTTGAAGGTGGCATCTCGAGAGTTGAGGCGTACCACACTCTaGAGGATGAAGACATACGAGAAACCAATTAGAAGCAGATCGAGT | + |
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Preference number: 5 (lower is better) Translates to: RALKVASRELRRTTL*RMKTYEKPIRSRSS Trigger: ACTCGATCTGCTTCTAATTGGTTTCTCGTATGTCTTCATCCTGCAGAGTGTGGTACGCCTCAACTCTCGAGATGCCACCTTCAAAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CCA 90 bp | ATGGCCAAGAGCATAGAAGTGAATGGAACAGAGAGCCACAAGTGTTaGGATTCTAAGCCGGGCACTCCCAAAAGAGTGAAAGTCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: MAKSIEVNGTESHKC*DSKPGTPKRVKVMK Trigger: TTTCATGACTTTCACTCTTTTGGGAGTGCCCGGCTTAGAATCCCAACACTTGTGGCTCTCTGTTCCATTCACTTCTATGCTCTTGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTCACAGGAGTATCTTGAATTGTTACTCTAGACAGTGTGACTTAGTTTGCCCAGGAGCAGATACATaGGTGTGTGAAGTGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PSHRSILNCYSRQCDLVCPGADT*VCEVWA Trigger: AGCCCACACTTCACACACCAATGTATCTGCTCCTGG...GCAAACTAAGTCACACTGTCTAGAGTAACAATTCAAGATACTCCTGTGAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | AAATGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTCCAGGAGCAGATACATaGGTGTGTGAAGTGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: KWGETTLLWSYTFHNIHSPGADT*VCEVWA Trigger: AGCCCACACTTCACACACCAATGTATCTGCTCCTGG...ACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTAATAAGGATGACACCCTaGGCAAGTGCCACCAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: WGETTLLWSYTFHNIHSLIRMTP*ASATSP Trigger: AGGACTGGTGGCACTTGCCAAGGGTGTCATCCTTAT...TAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTCACAGGAGTATCTTGAATTGTTACTCTAGACAGTGTGACTTAGTTTGCCATGTATTGAGGGCTTaGAAGGTGGCATCTCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PSHRSILNCYSRQCDLVCHVLRA*KVASRE Trigger: CTCTCGAGATGCCACCTTCAAAGCCCTCAATACATG...GCAAACTAAGTCACACTGTCTAGAGTAACAATTCAAGATACTCCTGTGAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | CTGACTATACATTGCATACATACACACACACACACACACACACACACATTATCAAAGAGGCACAGGACCTaGGGCACAAGAGCTAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LTIHCIHTHTHTHTHTLSKRHRT*GTRARV Trigger: TACTCTAGCTCTTGTGCCCAAGGTCCTGTGCCTCTT...TGATAATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGCAATGTATAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS-3UTR CAA 90 bp | TGGGGTGAGACCACTCTTTTGTGGTCCTATACTTTCCATAATATCCACAGTTTACATGTATTGAGGGCTTaGAAGGTGGCATCTCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: WGETTLLWSYTFHNIHSLHVLRA*KVASRE Trigger: CTCTCGAGATGCCACCTTCAAAGCCCTCAATACATG...TAAACTGTGGATATTATGGAAAGTATAGGACCACAAAAGAGTGGTCTCACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CAA 72 bp | AGTAGAAGAGGCATGGGCAGGATAAGGATGACACCCTaGGCAAGTGCCACCAGTCCTAGGCGTCCAACTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRRGMGRIRMTP*ASATSPRRPTR Trigger: TCTAGTTGGACGCCTAGGACTGGTGGCACTTGCCAAGGGTGTCATCCTTATCCTGCCCATGCCTCTTCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CCA 72 bp | GTCAGCCACCATCAGCAGGGCCAGGAGCAGATACATTaGTGTGTGAAGTGTGGGCTCTGTGATAACCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VSHHQQGQEQIH*CVKCGLCDNQE Trigger: TTCTTGGTTATCACAGAGCCCACACTTCACACACCAATGTATCTGCTCCTGGCCCTGCTGATGGTGGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS TCA 72 bp | ACCATCAGCAGGGCCAGGAGCAGATACATTGGTGTGTaGAGTGTGGGCTCTGTGATAACCAAGAAGAGGATA | + |
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Preference number: 6 (lower is better) Translates to: TISRARSRYIGV*SVGSVITKKRI Trigger: TATCCTCTTCTTGGTTATCACAGAGCCCACACTTCACACACCAATGTATCTGCTCCTGGCCCTGCTGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CAA 72 bp | CATGTATTGAGGGCTTTGAAGGTGGCATCTCGAGAGTaGAGGCGTACCACACTCTGCAGGATGAAGACATAC | + |
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Preference number: 6 (lower is better) Translates to: HVLRALKVASRE*RRTTLCRMKTY Trigger: GTATGTCTTCATCCTGCAGAGTGTGGTACGCCTCAACTCTCGAGATGCCACCTTCAAAGCCCTCAATACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CAA 72 bp | ATAACAAAGAGGTGGGCTGAGCATGTATTGAGGGCTTaGAAGGTGGCATCTCGAGAGTTGAGGCGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: ITKRWAEHVLRA*KVASRELRRTT Trigger: TGTGGTACGCCTCAACTCTCGAGATGCCACCTTCAAAGCCCTCAATACATGCTCAGCCCACCTCTTTGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS GCA 72 bp | AAGGTGGCATCTCGAGAGTTGAGGCGTACCACACTCTaGAGGATGAAGACATACGAGAAACCAATTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: KVASRELRRTTL*RMKTYEKPIRS Trigger: GCTTCTAATTGGTTTCTCGTATGTCTTCATCCTGCAGAGTGTGGTACGCCTCAACTCTCGAGATGCCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS TCA 72 bp | AGGTGGAATATGGTGGCCGATGCGGTGGGTGATGGATaGAAACAGTGCAGGTACATAAGTGATGAGAATAAC | + |
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Preference number: 6 (lower is better) Translates to: RWNMVADAVGDG*KQCRYISDENN Trigger: GTTATTCTCATCACTTATGTACCTGCACTGTTTTCATCCATCACCCACCGCATCGGCCACCATATTCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CAA 72 bp | GTGGGCTCTGTGATAACCAAGAAGAGGATAGCACCATaGCCAATGAGGATGGCCAAGAGCATAGAAGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VGSVITKKRIAP*PMRMAKSIEVN Trigger: ATTCACTTCTATGCTCTTGGCCATCCTCATTGGCAATGGTGCTATCCTCTTCTTGGTTATCACAGAGCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CCA 72 bp | GCAAGATCACGAAGAGCCCATAAATCCGATTTGGTCTaGTGTTACTACAGGCCATTTTTACCACAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: ARSRRAHKSDLV*CYYRPFLPQPY Trigger: ATATGGCTGTGGTAAAAATGGCCTGTAGTAACACCAGACCAAATCGGATTTATGGGCTCTTCGTGATCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CCA 72 bp | TACAAGCAAGATCACGAAGAGCCCATAAATCCGATTTaGTCTGGTGTTACTACAGGCCATTTTTACCACAGC | + |
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Preference number: 6 (lower is better) Translates to: YKQDHEEPINPI*SGVTTGHFYHS Trigger: GCTGTGGTAAAAATGGCCTGTAGTAACACCAGACCAAATCGGATTTATGGGCTCTTCGTGATCTTGCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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| CDS CAA 72 bp | CTACAAGCAAGATCACGAAGAGCCCATAAATCCGATTaGGTCTGGTGTTACTACAGGCCATTTTTACCACAG | + |
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Preference number: 6 (lower is better) Translates to: LQARSRRAHKSD*VWCYYRPFLPQ Trigger: CTGTGGTAAAAATGGCCTGTAGTAACACCAGACCAAATCGGATTTATGGGCTCTTCGTGATCTTGCTTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057385.5 ENSMUST00000215538.2 ENSMUST00000216750.2 |
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