Pregenerated sensors for OLFR653 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073926Ensembl transcript IDs: ENSMUST00000098174.3, ENSMUST00000215585.3, ENSMUST00000217466.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTTGGCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTaGCTCACCCACCTGTCGTCTTTAAGTGTTTCAAACCCAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: AWPSLCSHVLPGFSQ*LTHLSSLSVSNPTQ Trigger: CTGGGTTGGGTTTGAAACACTTAAAGACGACAGGTGGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 90 bp | GTTCCAGAACTCAAGGGAAATATGCAGGAAGGAAGGACAGCACCTTaGGGATTCTTGTCACTCTGGATGCAACTAGCAAGAAATTATCTT | + |
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Preference number: 1 (lower is better) Translates to: VPELKGNMQEGRTAP*GFLSLWMQLARNYL Trigger: AAGATAATTTCTTGCTAGTTGCATCCAGAGTGACAAGAATCCTCAAGGTGCTGTCCTTCCTTCCTGCATATTTCCCTTGAGTTCTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 90 bp | AAGAAATTATCTTTGGGTTCCTTTTACACCCAGGAATCTACCTACTaGGGTAAACAAAAGATCACACCAAGTCCACAGTTGCCCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: KKLSLGSFYTQESTY*GKQKITPSPQLPLK Trigger: TTTTAAGGGCAACTGTGGACTTGGTGTGATCTTTTGTTTACCTCAGTAGGTAGATTCCTGGGTGTAAAAGGAACCCAAAGATAATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 90 bp | TACTTTGGTGAAACCACATCATCTTCTCTTTATCCACCTAGGCTGTaGGTTTCTCAAGCCTATTTACCTTTAAACTTGACTGTATACTCA | + |
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Preference number: 1 (lower is better) Translates to: YFGETTSSSLYPPRL*VSQAYLPLNLTVYS Trigger: TGAGTATACAGTCAAGTTTAAAGGTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGGTTTCACCAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 90 bp | CATTCAATAGCTAAATTGACCCTCGGTGTTGTCAAGGCTGGATCTTaGCTCATAATCAATGTAATTTCTTATCTGAATTCACCACATCAC | + |
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Preference number: 1 (lower is better) Translates to: HSIAKLTLGVVKAGS*LIINVISYLNSPHH Trigger: GTGATGTGGTGAATTCAGATAAGAAATTACATTGATTATGAGTCAAGATCCAGCCTTGACAACACCGAGGGTCAATTTAGCTATTGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTCTTCCAGAGCACCTAGGTTCTATTTCCAGATCCCATGTGGCAGCTCACTCCTTGGGAAACTTCTaGTTGGCCTTCCCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TALPEHLGSISRSHVAAHSLGNF*LAFPLQ Trigger: CTGCAGAGGGAAGGCCAAGCAGAAGTTTCCCAAGGA...GTGAGCTGCCACATGGGATCTGGAAATAGAACCTAGGTGCTCTGGAAGAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTACCCACCCACTCCTGCTTCTTGGCCCTGGCATTCCCCTGTACTGGAGCAATGTTGAACTCATCATaGTTAGAAAACCAAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PLPTHSCFLALAFPCTGAMLNSS*LENQEA Trigger: TGCTTCTTGGTTTTCTAAGCATGATGAGTTCAACAT...TGCTCCAGTACAGGGGAATGCCAGGGCCAAGAAGCAGGAGTGGGTGGGTAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACACCCTCTGCAGCCATGTaGTTCCAGGCTTCTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTPSAAM*FQASHS Trigger: ACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGG...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR GCA 90 bp | CCACATCATCTTCTCTTTATCCACCTAGGCTGTGAGTTTCTCAAGCCTATTTACGCTTGGCCTTCCCTCTaGAGCCATGTGCTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PHHLLFIHLGCEFLKPIYAWPSL*SHVLPG Trigger: GCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAGC...GTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | CCACATCATCTTCTCTTTATCCACCTAGGCTGTGAGTTTCTCAAGCCTATTTACCCAGGCTTCTCACAGTaGCTCACCCACCTGTCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PHHLLFIHLGCEFLKPIYPGFSQ*LTHLSS Trigger: AGACGACAGGTGGGTGAGTCACTGTGAGAAGCCTGG...GTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACAGGAAGGACAGCACCTTaGGGATTCTTGTCACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTGRTAP*GFLSLW Trigger: CCAGAGTGACAAGAATCCTCAAGGTGCTGTCCTTCC...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTCCCTCTGCAGCCATGTaGTTCCAGGCTTCTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSPSAAM*FQASHS Trigger: ACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGG...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | CCACATCATCTTCTCTTTATCCACCTAGGCTGTGAGTTTCTCAAGCCTATTTACATGACACTGACTTACTaGGATCAGCAGAAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PHHLLFIHLGCEFLKPIYMTLTY*DQQKQQ Trigger: TTGCTGCTTCTGCTGATCTCAGTAAGTCAGTGTCAT...GTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACATTTGAAGTAATTCCTTaGGAAACTTCTGCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTFEVIP*ETSAWP Trigger: AGGCCAAGCAGAAGTTTCCCAAGGAATTACTTCAAA...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTTTTGAAGTAATTCCTTaGGAAACTTCTGCTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSFEVIP*ETSAWP Trigger: AGGCCAAGCAGAAGTTTCCCAAGGAATTACTTCAAA...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGAATGACACTGACTTACTaGGATCAGCAGAAGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KSTVALKMFLYVELIMLRMTLTY*DQQKQQ Trigger: TTGCTGCTTCTGCTGATCTCAGTAAGTCAGTGTCAT...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGATTCAACATTCCCTCCTaGCCTATTCCTTTTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KSTVALKMFLYVELIMLRFNIPS*PIPFPF Trigger: GAAAGGAAAAGGAATAGGTCAGGAGGGAATGTTGAA...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGACAGAGTAGTATCTTTTaGAGTAATTCCTTGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KSTVALKMFLYVELIMLRQSSIF*SNSLGN Trigger: GTTTCCCAAGGAATTACTTCAAAAGATACTACTCTG...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 72 bp | TCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTaGCTCACCCACCTGTCGTCTTTAAGTGTTTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLCSHVLPGFSQ*LTHLSSLSVSN Trigger: GTTTGAAACACTTAAAGACGACAGGTGGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR CCA 72 bp | GTATCTTTTGAAGTAATTCCTTGGGAAACTTCTGCTTaGCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: VSFEVIPWETSA*PSLCSHVLPGF Trigger: GAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAGCAGAAGTTTCCCAAGGAATTACTTCAAAAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 72 bp | CTCAAGGGAAATATGCAGGAAGGAAGGACAGCACCTTaGGGATTCTTGTCACTCTGGATGCAACTAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: LKGNMQEGRTAP*GFLSLWMQLAR Trigger: TCTTGCTAGTTGCATCCAGAGTGACAAGAATCCTCAAGGTGCTGTCCTTCCTTCCTGCATATTTCCCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR GCA 72 bp | CATCTGGAAATGGGACTAGTGGTTAGGAGTACTGACTaGTCTTCCAGAGCACCTAGGTTCTATTTCCAGATC | + |
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Preference number: 3 (lower is better) Translates to: HLEMGLVVRSTD*SSRAPRFYFQI Trigger: GATCTGGAAATAGAACCTAGGTGCTCTGGAAGAGCAGTCAGTACTCCTAACCACTAGTCCCATTTCCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCCAGAACTCAAGGGAAATATGCAGGAAGGAAGGACAGCACCTTGAGGATAGCAAGAAATTATCTTaGGGTTCCTTTTACACCCAG | + |
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Preference number: 3 (lower is better) Translates to: QFQNSREICRKEGQHLEDSKKLS*GSFYTQ Trigger: CTGGGTGTAAAAGGAACCCAAAGATAATTTCTTGCT...ATCCTCAAGGTGCTGTCCTTCCTTCCTGCATATTTCCCTTGAGTTCTGGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTGGTGAAATTCCTTGGTaGAGCAGACTGAGAAATAGG | + |
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Preference number: 3 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSGEIPW*SRLRNR Trigger: CCTATTTCTCAGTCTGCTCAACCAAGGAATTTCACC...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 72 bp | GTTCTGATAAGCTCATTACTGACAGGTGTATTCAGCTaGCAGTGCCTTTGTCCTTTTCCAGTGTATGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VLISSLLTGVFS*QCLCPFPVYVV Trigger: AACAACATACACTGGAAAAGGACAAAGGCACTGTCAGCTGAATACACCTGTCAGTAATGAGCTTATCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTACACCAAGTCCACAGTaGCCCTTAAAATGTTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSTPSPQ*PLKCFC Trigger: ACAAAAACATTTTAAGGGCAACTGTGGACTTGGTGT...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 72 bp | GAAACCACATCATCTTCTCTTTATCCACCTAGGCTGTaGGTTTCTCAAGCCTATTTACCTTTAAACTTGACT | + |
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Preference number: 3 (lower is better) Translates to: ETTSSSLYPPRL*VSQAYLPLNLT Trigger: AGTCAAGTTTAAAGGTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| 3UTR TCA 72 bp | GCCAAGATGACAAAGTTCATGGTATGTATAGTTTTATaGTACCGCAGTAAACGTTTATGTTCCTTGTTGATA | + |
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Preference number: 3 (lower is better) Translates to: AKMTKFMVCIVL*YRSKRLCSLLI Trigger: TATCAACAAGGAACATAAACGTTTACTGCGGTATCATAAAACTATACATACCATGAACTTTGTCATCTTGGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CTTGGCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTGACTCACCCGGCCAGCAGAACAGCTaGCTCTGTGGCAAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LGLPSAAMCFQASHSDSPGQQNS*LCGKDC Trigger: GCAGTCTTTGCCACAGAGTCAGCTGTTCTGCTGGCC...GGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CTTGGCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTGACTCACCCACAAATGTGGGAGGGTaGAAGGCAGTTTCATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LGLPSAAMCFQASHSDSPTNVGG*KAVSLG Trigger: CCCCAATGAAACTGCCTTCCACCCTCCCACATTTGT...GGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CTTGGCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTGACTCACCCGAACAGCTGACTCTGTaGCAAAGACTGCATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: LGLPSAAMCFQASHSDSPEQLTL*QRLHEQ Trigger: TTGTTCATGCAGTCTTTGCCACAGAGTCAGCTGTTC...GGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCCAGAACTCAAGGGAAATATGCAGGAAGGAAGGACAGCACCTTGAGGATGGCCAGCAGAACAGCTaGCTCTGTGGCAAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: QFQNSREICRKEGQHLEDGQQNS*LCGKDC Trigger: GCAGTCTTTGCCACAGAGTCAGCTGTTCTGCTGGCC...ATCCTCAAGGTGCTGTCCTTCCTTCCTGCATATTTCCCTTGAGTTCTGGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTGACTCACCCACCTAAAGATTTGCAAGTATaGTGTGTACCTGAGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AFPLQPCASRLLTVTHPPKDLQV*CVPEEA Trigger: TGCCTCCTCAGGTACACATCATACTTGCAAATCTTT...AGGTGGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | ACTGCTCTTCCAGAGCACCTAGGTTCTATTTCCAGATCCCATGTGGCAGCTCACCTGAATGCTCGGAACTaGGCATCCTTTGAGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TALPEHLGSISRSHVAAHLNARN*ASFEGS Trigger: ACTGCCCTCAAAGGATGCCCAGTTCCGAGCATTCAG...GTGAGCTGCCACATGGGATCTGGAAATAGAACCTAGGTGCTCTGGAAGAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTCTTCCAGAGCACCTAGGTTCTATTTCCAGATCCCATGTGGCAGCTCACGACCAAAGCGGTGAGTaGAAAATGAAAAGAATGCGG | + |
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Preference number: 4 (lower is better) Translates to: TALPEHLGSISRSHVAAHDQSGE*KMKRMR Trigger: CCGCATTCTTTTCATTTTTCACTCACCGCTTTGGTC...GTGAGCTGCCACATGGGATCTGGAAATAGAACCTAGGTGCTCTGGAAGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGACATAGACTAGGGGGTTaGGAACAGGAGGCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QQKQQTKARNSLAFGICGHRLGG*EQEAQG Trigger: TCCTTGTGCCTCCTGTTCTCAACCCCCTAGTCTATG...TCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTATGGCCAGCAGAACAGCTaGCTCTGTGGCAAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: KQQTKARNSLAFGICGDYGQQNS*LCGKDC Trigger: GCAGTCTTTGCCACAGAGTCAGCTGTTCTGCTGGCC...ATAATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATCATAGACTAGGGGGTTaGGAACAGGAGGCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKQQTKARNSLAFGICGDHRLGG*EQEAQG Trigger: TCCTTGTGCCTCCTGTTCTCAACCCCCTAGTCTATG...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCCAGAACTCAAGGGAAATATGCAGGAAGGAAGGACAGCACCTTGAGGATAGGTACATTGGCTCATaGAGAGCCCTGTCTGTTATA | + |
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Preference number: 4 (lower is better) Translates to: QFQNSREICRKEGQHLEDRYIGS*RALSVI Trigger: TATAACAGACAGGGCTCTCCATGAGCCAATGTACCT...ATCCTCAAGGTGCTGTCCTTCCTTCCTGCATATTTCCCTTGAGTTCTGGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGACAAGAAGAGGTACATTaGCTCATGGAGAGCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QQKQQTKARNSLAFGICGQEEVH*LMESPV Trigger: GACAGGGCTCTCCATGAGCCAATGTACCTCTTCTTG...TCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | GATCAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTCTGAATGCTCGGAACTaGGCATCCTTTGAGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: DQQKQQTKARNSLAFGICLNARN*ASFEGS Trigger: ACTGCCCTCAAAGGATGCCCAGTTCCGAGCATTCAG...ACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACAGGATTTGTTTGGTATTaGTGCCATAGACTAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTGFVWY*CHRLGG Trigger: ACCCCCTAGTCTATGGCATCAATACCAAACAAATCC...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | GATCAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTACAAATGTGGGAGGGTaGAAGGCAGTTTCATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DQQKQQTKARNSLAFGICTNVGG*KAVSLG Trigger: CCCCAATGAAACTGCCTTCCACCCTCCCACATTTGT...ACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACAGAACAGCTGACTCTGTaGCAAAGACTGCATGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTEQLTL*QRLHEQ Trigger: TTGTTCATGCAGTCTTTGCCACAGAGTCAGCTGTTC...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTCAAGAAGAGGTACATTaGCTCATGGAGAGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSQEEVH*LMESPV Trigger: GACAGGGCTCTCCATGAGCCAATGTACCTCTTCTTG...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGCGGTGAGTGAAAAATaGAAAGAATGCGGGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: QQKQQTKARNSLAFGICGAVSEK*KECGDI Trigger: TATATCCCCGCATTCTTTTCATTTTTCACTCACCGC...TCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATGACCAAAGCGGTGAGTaGAAAATGAAAAGAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQQTKARNSLAFGICGDDQSGE*KMKRMR Trigger: CCGCATTCTTTTCATTTTTCACTCACCGCTTTGGTC...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | GATCAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGACCAAAGCGGTGAGTaGAAAATGAAAAGAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DQQKQQTKARNSLAFGICDQSGE*KMKRMR Trigger: CCGCATTCTTTTCATTTTTCACTCACCGCTTTGGTC...ACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | GATCAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGATTTGTTTGGTATTaGTGCCATAGACTAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQQKQQTKARNSLAFGICGFVWY*CHRLGG Trigger: ACCCCCTAGTCTATGGCATCAATACCAAACAAATCC...ACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR GCA 90 bp | GAGTCACTCTCCTTCATACCAATGACACAAAGTACACAGCCTCTGGGTAAGACATCTGAGCCAGAATATTaGCAGCATTTTAGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ESLSFIPMTQSTQPLGKTSEPEY*QHFRQC Trigger: ACATTGCCTAAAATGCTGGCAATATTCTGGCTCAGA...TGTCTTACCCAGAGGCTGTGTACTTTGTGTCATTGGTATGAAGGAGAGTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CCACATCATCTTCTCTTTATCCACCTAGGCTGTGAGTTTCTCAAGCCTATTTACCAAGCAAAACAAATGTaGGAGGGTGGAAGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHHLLFIHLGCEFLKPIYQAKQM*EGGRQF Trigger: AAACTGCCTTCCACCCTCCCACATTTGTTTTGCTTG...GTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CCACATCATCTTCTCTTTATCCACCTAGGCTGTGAGTTTCTCAAGCCTATTTACAGGTACATTGGCTCATaGAGAGCCCTGTCTGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: PHHLLFIHLGCEFLKPIYRYIGS*RALSVI Trigger: TATAACAGACAGGGCTCTCCATGAGCCAATGTACCT...GTAAATAGGCTTGAGAAACTCACAGCCTAGGTGGATAAAGAGAAGATGATGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATGAACAGCTGACTCTGTaGCAAAGACTGCATGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QKQQTKARNSLAFGICGDEQLTL*QRLHEQ Trigger: TTGTTCATGCAGTCTTTGCCACAGAGTCAGCTGTTC...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGCAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGACAATTACAACAGCATTaGGGATGGATGTATAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQKQQTKARNSLAFGICGQLQQH*GWMYSG Trigger: TCCACTATACATCCATCCTCAATGCTGTTGTAATTG...TCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATGCGGTGAGTGAAAAATaGAAAGAATGCGGGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: QKQQTKARNSLAFGICGDAVSEK*KECGDI Trigger: TATATCCCCGCATTCTTTTCATTTTTCACTCACCGC...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATAAAGATTTGCAAGTATaGTGTGTACCTGAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKQQTKARNSLAFGICGDKDLQV*CVPEEA Trigger: TGCCTCCTCAGGTACACATCATACTTGCAAATCTTT...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGACATAGACTAGGGGGTTaGGAACAGGAGGCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSTVALKMFLYVELIMLRHRLGG*EQEAQG Trigger: TCCTTGTGCCTCCTGTTCTCAACCCCCTAGTCTATG...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGACTGAATGCTCGGAACTaGGCATCCTTTGAGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSTVALKMFLYVELIMLRLNARN*ASFEGS Trigger: ACTGCCCTCAAAGGATGCCCAGTTCCGAGCATTCAG...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTGCGGTGAGTGAAAAATaGAAAGAATGCGGGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSAVSEK*KECGDI Trigger: TATATCCCCGCATTCTTTTCATTTTTCACTCACCGC...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTAAAGATTTGCAAGTATaGTGTGTACCTGAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSKDLQV*CVPEEA Trigger: TGCCTCCTCAGGTACACATCATACTTGCAAATCTTT...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGAACAAATGTGGGAGGGTaGAAGGCAGTTTCATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTVALKMFLYVELIMLRTNVGG*KAVSLG Trigger: CCCCAATGAAACTGCCTTCCACCCTCCCACATTTGT...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTATCAAGCAAAACAAATGTaGGAGGGTGGAAGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQQTKARNSLAFGICGDYQAKQM*EGGRQF Trigger: AAACTGCCTTCCACCCTCCCACATTTGTTTTGCTTG...ATAATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTATAGGTACATTGGCTCATaGAGAGCCCTGTCTGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KQQTKARNSLAFGICGDYRYIGS*RALSVI Trigger: TATAACAGACAGGGCTCTCCATGAGCCAATGTACCT...ATAATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CCA 90 bp | AAGTCCACAGTTGCCCTTAAAATGTTTTTGTATGTTGAACTCATCATGCTTAGACAAGAAGAGGTACATTaGCTCATGGAGAGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTVALKMFLYVELIMLRQEEVH*LMESPV Trigger: GACAGGGCTCTCCATGAGCCAATGTACCTCTTCTTG...TCTAAGCATGATGAGTTCAACATACAAAAACATTTTAAGGGCAACTGTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTCAATTACAACAGCATTaGGGATGGATGTATAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSQLQQH*GWMYSG Trigger: TCCACTATACATCCATCCTCAATGCTGTTGTAATTG...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTTCTGAGCCAGAATATTaGCAGCATTTTAGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSSEPEY*QHFRQC Trigger: ACATTGCCTAAAATGCTGGCAATATTCTGGCTCAGA...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTATTCTGAGCCAGAATATTaGCAGCATTTTAGGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQTKARNSLAFGICGDYSEPEY*QHFRQC Trigger: ACATTGCCTAAAATGCTGGCAATATTCTGGCTCAGA...ATAATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS TCA 90 bp | AATGTGGGCTCCACATGTGCTGAATGCTCGGAACTGGGCATCCTTTaGGGGCAGTCGCAGCACGGCCTGCAGAATCAGGATGTAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NVGSTCAECSELGIL*GQSQHGLQNQDVGG Trigger: ACCTCCTACATCCTGATTCTGCAGGCCGTGCTGCGACTGCCCTCAAAGGATGCCCAGTTCCGAGCATTCAGCACATGTGGAGCCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCCCTCTGCAGCCATGTGCTTCCAGGCTTCTCACAGTGACTCACCCACCTTGGAAGGCAGTTTCATaGGGGATAGCAGCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFPLQPCASRLLTVTHPPWKAVS*GIAAES Trigger: GCTCTCTGCTGCTATCCCCAATGAAACTGCCTTCCA...AGGTGGGTGAGTCACTGTGAGAAGCCTGGAAGCACATGGCTGCAGAGGGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS GCA 90 bp | GAGAATGACAAAGGGGAAGACAAAGAGAAGGCCACGAGTCACGCATaGCAGGCCAATCTTTCCAATTACAACAGCATTGAGGATGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ENDKGEDKEKATSHA*QANLSNYNSIEDGC Trigger: ACATCCATCCTCAATGCTGTTGTAATTGGAAAGATTGGCCTGGCATGCGTGACTCGTGGCCTTCTCTTTGTCTTCCCCTTTGTCATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTGGAAGGCAGTTTCATaGGGGATAGCAGCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QKQQTKARNSLAFGICGDWKAVS*GIAAES Trigger: GCTCTCTGCTGCTATCCCCAATGAAACTGCCTTCCA...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATACAAGAAGAGGTACATaGGCTCATGGAGAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QKQQTKARNSLAFGICGDTRRGT*AHGEPC Trigger: ACAGGGCTCTCCATGAGCCAATGTACCTCTTCTTGT...ATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGCAAACTAAAGCCAGGAACTCATTAGCCTTTGGTATATGTGGAGATTATTGGAAGGCAGTTTCATaGGGGATAGCAGCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQQTKARNSLAFGICGDYWKAVS*GIAAES Trigger: GCTCTCTGCTGCTATCCCCAATGAAACTGCCTTCCA...ATAATCTCCACATATACCAAAGGCTAATGAGTTCCTGGCTTTAGTTTGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTTTAAAATTATCTCCAACAGGTAAGGACCAACTCCCCTCACCAAATTCTACAAGAAGAGGTACATaGGCTCATGGAGAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CCLKLSPTGKDQLPSPNSTRRGT*AHGEPC Trigger: ACAGGGCTCTCCATGAGCCAATGTACCTCTTCTTGT...AGAATTTGGTGAGGGGAGTTGGTCCTTACCTGTTGGAGATAATTTTAAACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS CCA 72 bp | ATCCCAGGGATTCCAAGCAAAACAAATGTGGGAGGGTaGAAGGCAGTTTCATTGGGGATAGCAGCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPGIPSKTNVGG*KAVSLGIAAES Trigger: GCTCTCTGCTGCTATCCCCAATGAAACTGCCTTCCACCCTCCCACATTTGTTTTGCTTGGAATCCCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS TCA 72 bp | GAACAGGAGGCACAAGGAGATAAAGATTTGCAAGTATaGTGTGTACCTGAGGAGGCACGTGGTGACCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EQEAQGDKDLQV*CVPEEARGDQS Trigger: GCTTTGGTCACCACGTGCCTCCTCAGGTACACATCATACTTGCAAATCTTTATCTCCTTGTGCCTCCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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| CDS GCA 72 bp | AAAGGGGAAGACAAAGAGAAGGCCACGAGTCACGCATaGCAGGCCAATCTTTCCAATTACAACAGCATTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KGEDKEKATSHA*QANLSNYNSIE Trigger: CTCAATGCTGTTGTAATTGGAAAGATTGGCCTGGCATGCGTGACTCGTGGCCTTCTCTTTGTCTTCCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098174.3 ENSMUST00000215585.3 ENSMUST00000217466.2 |
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