Pregenerated sensors for OLFR65 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000110259Ensembl transcript IDs: ENSMUST00000106864.5, ENSMUST00000214300.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTATATTCAAGATAGTTTTCTAGAACCATTAGCCAGCTGCATATaGGCAAAATTACATTTAGGAGGCCCAGTGTATGGAGAACACATG | + |
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Preference number: 1 (lower is better) Translates to: HYIQDSFLEPLASCI*AKLHLGGPVYGEHM Trigger: CATGTGTTCTCCATACACTGGGCCTCCTAAATGTAATTTTGCTCATATGCAGCTGGCTAATGGTTCTAGAAAACTATCTTGAATATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGATGGAGAACACATGGTaGATGATGGGCTTTGACCCA | + |
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Preference number: 2 (lower is better) Translates to: WLWLSNYPSILCPVSLLMMENTW*MMGFDP Trigger: TGGGTCAAAGCCCATCATTCACCATGTGTTCTCCAT...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGCAGGATGCCAGGCTCTaGAATTCTGTGTTTCAGATC | + |
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Preference number: 2 (lower is better) Translates to: WLWLSNYPSILCPVSLLMQDARL*NSVFQI Trigger: GATCTGAAACACAGAATTCCAGAGCCTGGCATCCTG...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAGAAAGAACACATGGTGAATaGTGGGCTTTGACCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: WIICTGSLRGHNTCLGKERTHGE*WALTQT Trigger: TGTTTGGGTCAAAGCCCATCATTCACCATGTGTTCT...TTCTTTCCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGTCCAGTAATAACCCTTaGCTATGTTTTTCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: IFWIICTGSLRGHNTCLGSSNNP*LCFSHP Trigger: GGGATGGGAAAAACATAGTCAAGGGTTATTACTGGA...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAATTAGCCAGCTGCATATaGGCAAAATTACATTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KLSRLFSWTQFSKINHPQLASCI*AKLHLG Trigger: TCCTAAATGTAATTTTGCTCATATGCAGCTGGCTAA...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAACTAAAGTATTTTGCATaGGTACTTCTTCCTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: KLSRLFSWTQFSKINHPQLKYFA*VLLPAT Trigger: TGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAG...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAGAACTAAAGTATTTTGCATaGGTACTTCTTCCTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: WIICTGSLRGHNTCLGKELKYFA*VLLPAT Trigger: TGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAG...TTCTTTCCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR CCA 72 bp | TTCCCATCCCAGACATATGACCAGGATGCCAGGCTCTaGAATTCTGTGTTTCAGATCTCCCATCTAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: FPSQTYDQDARL*NSVFQISHLVL Trigger: TAGCACTAGATGGGAGATCTGAAACACAGAATTCCAGAGCCTGGCATCCTGGTCATATGTCTGGGATGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR TCA 72 bp | ATAACCCTTGACTATGTTTTTCCCATCCCAGACATATaGCCAGGATGCCAGGCTCTGGAATTCTGTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: ITLDYVFPIPDI*PGCQALEFCVS Trigger: TGAAACACAGAATTCCAGAGCCTGGCATCCTGGTCATATGTCTGGGATGGGAAAAACATAGTCAAGGGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGCTAGTGCTAACTATCTaGTTCTCCAAACAGGACTTT | + |
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Preference number: 3 (lower is better) Translates to: WLWLSNYPSILCPVSLLMLVLTI*FSKQDF Trigger: AAAGTCCTGTTTGGAGAACAAGATAGTTAGCACTAG...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGCATATATGTGTGTACTaGTTGAGTGTCATAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: WLWLSNYPSILCPVSLLMHICVY*LSVISS Trigger: TGAGCTTATGACACTCAACAAGTACACACATATATG...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR TCA 72 bp | CAAGATAGTTTTCTAGAACCATTAGCCAGCTGCATATaGGCAAAATTACATTTAGGAGGCCCAGTGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: QDSFLEPLASCI*AKLHLGGPVYG Trigger: TCCATACACTGGGCCTCCTAAATGTAATTTTGCTCATATGCAGCTGGCTAATGGTTCTAGAAAACTATCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR GCA 72 bp | GTCTCTACTAAAGTATTTTGCATGGGTACTTCTTCCTaGAACACTGTCACTATATTTACATTCCAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VSTKVFCMGTSS*NTVTIFTFQEQ Trigger: CTGCTCCTGGAATGTAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGCATATATGTGTGTACTaGTTGAGTGTCATAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: IFWIICTGSLRGHNTCLGHICVY*LSVISS Trigger: TGAGCTTATGACACTCAACAAGTACACACATATATG...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGAACGGTCATAGGCCATaGCAAGCAAGACCCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMNGHRP*QARPPT Trigger: AGTCGGGGGTCTTGCTTGCCATGGCCTATGACCGTT...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGGCCTGTGAGCAGGAATaGGGAAGAGGAAATGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMACEQE*GRGNVE Trigger: CTCAACATTTCCTCTTCCCCATTCCTGCTCACAGGC...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAAGACCTGGGAAGCCTGTaGGCAGGAATGGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQDLGSL*AGMGKR Trigger: CCTCTTCCCCATTCCTGCTCACAGGCTTCCCAGGTC...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TCTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTGACCTGGGAAGCCTGTaGGCAGGAATGGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: STKVFCMGTSSCNTVTIFDLGSL*AGMGKR Trigger: CCTCTTCCCCATTCCTGCTCACAGGCTTCCCAGGTC...AAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAGAAGGGAGGGAGATCAGGTaGTGGGCTTTCTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: WIICTGSLRGHNTCLGKEGREIR*WAFSRP Trigger: AGGTCTGGAGAAAGCCCATCACCTGATCTCCCTCCC...TTCTTTCCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGGTGATGTGGACGACATaGGGAACATTCTTTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMVMWTT*GTFFPN Trigger: GTTTGGAAAGAATGTTCCTCATGTCGTCCACATCAC...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TCTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTGGGAGGGAGATCAGGTaGTGGGCTTTCTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: STKVFCMGTSSCNTVTIFGREIR*WAFSRP Trigger: AGGTCTGGAGAAAGCCCATCACCTGATCTCCCTCCC...AAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGTGGCCAATTTCCCTGTaGTTTAACCATAGTACACTC | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMWPISL*FNHSTL Trigger: GAGTGTACTATGGTTAAATCACAGGGAAATTGGCCA...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGCGTAGGAGAAGAAGATaGTCAGGAAATCTAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMRRRRR*SGNLAR Trigger: TCTTGCTAGATTTCCTGATCATCTTCTTCTCCTACG...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCTGGCTGAGTAATTATCCTAGCATTTTATGTCCGGTGAGTCTGCTCATGTTCTTTCCAAACCTGTaGATAAACGTCAGACCAACC | + |
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Preference number: 4 (lower is better) Translates to: WLWLSNYPSILCPVSLLMFFPNL*INVRPT Trigger: GGTTGGTCTGACGTTTATTCACAGGTTTGGAAAGAA...CATGAGCAGACTCACCGGACATAAAATGCTAGGATAATTACTCAGCCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAAAACGGTCATAGGCCATaGCAAGCAAGACCCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQNGHRP*QARPPT Trigger: AGTCGGGGGTCTTGCTTGCCATGGCCTATGACCGTT...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAATCAGCACTGTGGGCATaGTGGTCAATGTTACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQSALWA*WSMLRQ Trigger: TTGGCGTAACATTGACCACCATGCCCACAGTGCTGA...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGTCAGCACTGTGGGCATaGTGGTCAATGTTACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGSALWA*WSMLRQ Trigger: TTGGCGTAACATTGACCACCATGCCCACAGTGCTGA...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAAGATTATTGGCATGATTaGCAGACCAGCCCTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQDYWHD*QTSPHH Trigger: GTGATGAGGGCTGGTCTGTCAATCATGCCAATAATC...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGTCAGACCAACCACAGTaGCATAGAAGACCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGSDQPQ*HRRPRC Trigger: GCATCTTGGTCTTCTATGTCACTGTGGTTGGTCTGA...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAGAATCAGACCAACCACAGTaGCATAGAAGACCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: WIICTGSLRGHNTCLGKESDQPQ*HRRPRC Trigger: GCATCTTGGTCTTCTATGTCACTGTGGTTGGTCTGA...TTCTTTCCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAGACGTAGCTCATTGTaGTGTGGACGACATGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGRRSSL*CGRHEE Trigger: TTCCTCATGTCGTCCACATCACAATGAGCTACGTCT...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | TCTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTGCCTGTGAGCAGGAATaGGGAAGAGGAAATGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: STKVFCMGTSSCNTVTIFACEQE*GRGNVE Trigger: CTCAACATTTCCTCTTCCCCATTCCTGCTCACAGGC...AAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGGTACACTCAGCACTGTaGGCATGGTGGTCAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGVHSAL*AWWSML Trigger: TAACATTGACCACCATGCCCACAGTGCTGAGTGTAC...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAAGTACACTCAGCACTGTaGGCATGGTGGTCAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQVHSAL*AWWSML Trigger: TAACATTGACCACCATGCCCACAGTGCTGAGTGTAC...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAATGTAGACAGAAAGCATaGGAGAGTACATGGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: KLSRLFSWTQFSKINHPQCRQKA*ESTWER Trigger: TCGCTCCCATGTACTCTCCCATGCTTTCTGTCTACA...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGTGTAGACAGAAAGCATaGGAGAGTACATGGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGCRQKA*ESTWER Trigger: TCGCTCCCATGTACTCTCCCATGCTTTCTGTCTACA...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | CTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTAGATTATTGGCATGATTaGCAGACCAGCCCTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: LLKYFAWVLLPATLSLYLDYWHD*QTSPHH Trigger: GTGATGAGGGCTGGTCTGTCAATCATGCCAATAATC...TAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAGAAGTGATGTGGACGACATaGGGAACATTCTTTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: WIICTGSLRGHNTCLGKEVMWTT*GTFFPN Trigger: GTTTGGAAAGAATGTTCCTCATGTCGTCCACATCAC...TTCTTTCCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | CTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTAAGACGTAGCTCATTGTaGTGTGGACGACATGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLKYFAWVLLPATLSLYLRRSSL*CGRHEE Trigger: TTCCTCATGTCGTCCACATCACAATGAGCTACGTCT...TAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | AAATTACATTTAGGAGGCCCAGTGTATGGAGAACACATGGTGAATGATGGGCTTCTAAGAAATAATACATaGGCTCATGGAGGTTATGGT | + |
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Preference number: 4 (lower is better) Translates to: KLHLGGPVYGEHMVNDGLLRNNT*AHGGYG Trigger: ACCATAACCTCCATGAGCCCATGTATTATTTCTTAG...AAGCCCATCATTCACCATGTGTTCTCCATACACTGGGCCTCCTAAATGTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAGATGCAACAGATGTaGGAGACACATGTGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: IFWIICTGSLRGHNTCLGKMQQM*ETHVLR Trigger: TCTCAACACATGTGTCTCCCACATCTGTTGCATCTT...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | TCTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTCGTAGGAGAAGAAGATaGTCAGGAAATCTAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: STKVFCMGTSSCNTVTIFRRRRR*SGNLAR Trigger: TCTTGCTAGATTTCCTGATCATCTTCTTCTCCTACG...AAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR TCA 90 bp | CTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTATTCTTTCCAAACCTGTaGATAAACGTCAGACCAACC | + |
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Preference number: 4 (lower is better) Translates to: LLKYFAWVLLPATLSLYLFFPNL*INVRPT Trigger: GGTTGGTCTGACGTTTATTCACAGGTTTGGAAAGAA...TAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | CTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTAGGCTCATGGAGGTTATaGTCATCCTTAATGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLKYFAWVLLPATLSLYLGSWRL*SSLMRK Trigger: TTTCCTCATTAAGGATGACCATAACCTCCATGAGCC...TAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | TCTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTGGCTCATGGAGGTTATaGTCATCCTTAATGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: STKVFCMGTSSCNTVTIFGSWRL*SSLMRK Trigger: TTTCCTCATTAAGGATGACCATAACCTCCATGAGCC...AAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CCA 90 bp | CTACTAAAGTATTTTGCATGGGTACTTCTTCCTGCAACACTGTCACTATATTTAAAGATGCAACAGATGTaGGAGACACATGTGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLKYFAWVLLPATLSLYLKMQQM*ETHVLR Trigger: TCTCAACACATGTGTCTCCCACATCTGTTGCATCTT...TAAATATAGTGACAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CAA 90 bp | ATCTTTTGGATTATATGTACTGGTTCTTTAAGAGGCCATAATACCTGTTTGGGGAAAAGGAGGGTGCCGTaGCCAAGTAATATGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: IFWIICTGSLRGHNTCLGKRRVP*PSNMEI Trigger: TATCTCCATATTACTTGGCAACGGCACCCTCCTTTT...CCCCAAACAGGTATTATGGCCTCTTAAAGAACCAGTACATATAATCCAAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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| CDS-3UTR CAA 90 bp | AAACTGAGCAGACTTTTCTCATGGACACAATTTTCCAAGATCAATCATCCTCAAAAAAGGAGGGTGCCGTaGCCAAGTAATATGGAGATA | + |
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Preference number: 5 (lower is better) Translates to: KLSRLFSWTQFSKINHPQKRRVP*PSNMEI Trigger: TATCTCCATATTACTTGGCAACGGCACCCTCCTTTT...TTGAGGATGATTGATCTTGGAAAATTGTGTCCATGAGAAAAGTCTGCTCAGTTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106864.5 ENSMUST00000214300.2 |
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