Pregenerated sensors for OLFR645 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051340Ensembl transcript IDs: ENSMUST00000057104.7
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGTGGAGGAGTTAGAGAAAGGACTGGAGGAGCTGAAGGGGTTTaGAACCCCATAGGAAGAACAACAATATCAACCAACCAGACCCCC | + |
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Preference number: 1 (lower is better) Translates to: PSGGVRERTGGAEGV*NPIGRTTISTNQTP Trigger: GGGGGTCTGGTTGGTTGATATTGTTGTTCTTCCTATGGGGTTGCAAACCCCTTCAGCTCCTCCAGTCCTTTCTCTAACTCCTCCACTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR CCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTaGGGAGTCAAGCTTAGTGGCAAATTTCCTTACCCGTTAGACCAA | + |
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Preference number: 1 (lower is better) Translates to: IYMSWCIERDQRTTI*GVKLSGKFPYPLDQ Trigger: TTGGTCTAACGGGTAAGGAAATTTGCCACTAAGCTTGACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGAGTTATGACTGTCTCCTaGGAGGCTCTGCCAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ILFPLSPIRGNMRPREIGVMTVS*EALPVP Trigger: AGGCACTGGCAGAGCCTCTCAGGAGACAGTCATAAC...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTAAGGACTGGAGGAGCTaGAGGGGTTTGCAACCCCAT | + |
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Preference number: 2 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSKDWRS*RGLQPH Trigger: ATGGGGTTGCAAACCCCTTCAGCTCCTCCAGTCCTT...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTTCTCCTGAGAGGCTCTaGCAGTGCCTGACAAATACA | + |
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Preference number: 2 (lower is better) Translates to: WVKTQERSDKTFLWTLTCSPERL*QCLTNT Trigger: TGTATTTGTCAGGCACTGGCAGAGCCTCTCAGGAGA...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGAGGTTCTGACCCCAAATaGTGTTGGCAGATACAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ILFPLSPIRGNMRPREIGGSDPK*CWQIQA Trigger: GGCTTGTATCTGCCAACACCATTTGGGGTCAGAACC...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTATGCCAACGTGCCTCTaGCCACCTGCATGTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSMPTCL*PPACWK Trigger: TTTCCAACATGCAGGTGGCCAGAGGCACGTTGGCAT...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR TCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCGTTAAGTTCTGGTTCTaGCCCCAAATGGTGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: IYMSWCIERDQRTTIWGVVKFWF*PQMVLA Trigger: TGCCAACACCATTTGGGGTCAGAACCAGAACTTAAC...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR TCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCAGGGATGTGGTTAACTaGAATGCACGACAAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: IYMSWCIERDQRTTIWGVRDVVN*NARQRG Trigger: TCCCCTTTGTCGTGCATTTCAGTTAACCACATCCCT...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR GCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCGAGAGGCTCTGCCAGTaGCTGACAAATACAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: IYMSWCIERDQRTTIWGVERLCQ*LTNTDV Trigger: TACATCTGTATTTGTCAGGCACTGGCAGAGCCTCTC...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGATGTAGCAATAGGGGATaGGGAACTGGGGGTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: ILFPLSPIRGNMRPREIGCSNRG*GTGGIY Trigger: GTAAATACCCCCAGTTCCCCATCCCCTATTGCTACA...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTCAGAGGACAACAATTTaGGGAGTCAAGCTTAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: WVKTQERSDKTFLWTLTCQRTTI*GVKLSG Trigger: GCCACTAAGCTTGACTCCCCAAATTGTTGTCCTCTG...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR TCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCTATGAAACTTTGGTTTaGAGATGCTCAGCCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: IYMSWCIERDQRTTIWGVYETLV*RCSALL Trigger: AAGAAGGGCTGAGCATCTTCAAACCAAAGTTTCATA...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTAATCTCCCCCTATTCTaGTGCTGTTCATATTTAGTG | + |
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Preference number: 2 (lower is better) Translates to: WVKTQERSDKTFLWTLTCNLPLF*CCSYLV Trigger: CACTAAATATGAACAGCACCAGAATAGGGGGAGATT...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTAAATACAGATGTAGATaGTCACAGCCAACCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSKYRCR*SQPTIG Trigger: TCCAATGGTTGGCTGTGAGCATCTACATCTGTATTT...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTACCAACTTACTGGCCTaGATGTCATATTTAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: WVKTQERSDKTFLWTLTCTNLLA*MSYLKL Trigger: GAGTTTTAAATATGACATGCAGGCCAGTAAGTTGGT...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGATTCTATATGAAACTTTaGTTTGAAGATGCTCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ILFPLSPIRGNMRPREIGFYMKL*FEDAQP Trigger: GGGCTGAGCATCTTCAAACCAAAGTTTCATATAGAA...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR CCA 72 bp | CAGGAAAACAAGAGGTGCCCAGACCCAACAGGGATGTaGTTAACTGAAATGCACGACAAAGGGGAGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: QENKRCPDPTGM*LTEMHDKGEGE Trigger: TTCTCCCTCCCCTTTGTCGTGCATTTCAGTTAACCACATCCCTGTTGGGTCTGGGCACCTCTTGTTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR GCA 72 bp | TTACCAGCAAGTCCCAGATGTCAGGAAAACAAGAGGTaGCCAGACCCAACAGGGATGTGGTTAACTGAAATG | + |
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Preference number: 3 (lower is better) Translates to: LPASPRCQENKR*PDPTGMWLTEM Trigger: CATTTCAGTTAACCACATCCCTGTTGGGTCTGGGCACCTCTTGTTTTCCTGACATCTGGGACTTGCTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR GCA 72 bp | GGAGTTAGAGAAAGGACTGGAGGAGCTGAAGGGGTTTaGAACCCCATAGGAAGAACAACAATATCAACCAAC | + |
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Preference number: 3 (lower is better) Translates to: GVRERTGGAEGV*NPIGRTTISTN Trigger: GTTGGTTGATATTGTTGTTCTTCCTATGGGGTTGCAAACCCCTTCAGCTCCTCCAGTCCTTTCTCTAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR CCA 72 bp | TCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTaGGGAGTCAAGCTTAGTGGCAAATTTCCTTACCCG | + |
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Preference number: 3 (lower is better) Translates to: SWCIERDQRTTI*GVKLSGKFPYP Trigger: CGGGTAAGGAAATTTGCCACTAAGCTTGACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTGATGCCAAGGAGCACTaGCTAACTGAAGCCTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: WVKTQERSDKTFLWTLTCDAKEH*LTEACY Trigger: ATAACAGGCTTCAGTTAGCAAGTGCTCCTTGGCATC...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTCTGGCCACCTGCATGTaGGAAAAATATCCAAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: WVKTQERSDKTFLWTLTCLATCM*EKYPKN Trigger: ATTCTTTGGATATTTTTCCAACATGCAGGTGGCCAG...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR CCA 72 bp | ATTTCCATTTCACTGGGGATGGGTATATACATGTCATaGTGTATAGAGAGAGATCAGAGGACAACAATTTGG | + |
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Preference number: 3 (lower is better) Translates to: ISISLGMGIYMS*CIERDQRTTIW Trigger: CCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATATACCCATCCCCAGTGAAATGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| 3UTR CAA 72 bp | CCAAACCCAGACACTCTTGTGGATGCCAAGGAGCACTaGCTAACTGAAGCCTGTTATGACTGTCTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PNPDTLVDAKEH*LTEACYDCLLR Trigger: TCTCAGGAGACAGTCATAACAGGCTTCAGTTAGCAAGTGCTCCTTGGCATCCACAAGAGTGTCTGGGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTTGGGAGAGGATGTTCTaGGGGTGGCAGAAGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WVKTQERSDKTFLWTLTCWERMF*GWQKGS Trigger: GCTGCCCTTCTGCCACCCTCAGAACATCCTCTCCCA...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGAAGGATATGGACTGCATaGGGCAGGCCAGCCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ILFPLSPIRGNMRPREIGRIWTA*GRPAPK Trigger: CTTTGGGGCTGGCCTGCCTCATGCAGTCCATATCCT...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR GCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGACATGAGGATATGGACTaGATGAGGCAGGCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ILFPLSPIRGNMRPREIGHEDMD*MRQASP Trigger: GGGGCTGGCCTGCCTCATGCAGTCCATATCCTCATG...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR GCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGAGGCTGGTGCAAGCTCTaGTCCTCCTTGATGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILFPLSPIRGNMRPREIGGWCKL*SSLMMR Trigger: CCTCATCATCAAGGAGGAGCAGAGCTTGCACCAGCC...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTGGGACACACATGTGTTaGGTGTCTTCAGACGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSGTHMC*VSSDAP Trigger: AGGAGCGTCTGAAGACACTCAACACATGTGTGTCCC...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCATAAAGCTGGGAACCTaGGAGGCATTGATCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IYMSWCIERDQRTTIWGVIKLGT*EALILK Trigger: CTTCAGGATCAATGCCTCTCAGGTTCCCAGCTTTAT...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR GCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTAGAGATGAGAATGAGTaGAGAGTCCAGGCCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSRDENE*RVQAKG Trigger: ACCTTTGGCCTGGACTCTGCACTCATTCTCATCTCT...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTAAACAGTTGGCAGTGTaGAGAAAGACACACCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: WVKTQERSDKTFLWTLTCKQLAV*RKTHQG Trigger: ACCTTGGTGTGTCTTTCTCCACACTGCCAACTGTTT...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTGGTAGTCAAAACAGTTaGCAGTGTGGAGAAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: WVKTQERSDKTFLWTLTCGSQNS*QCGERH Trigger: GTGTCTTTCTCCACACTGCCAACTGTTTTGACTACC...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTTTGATCACTCGGGCATaGAAGCAAAGGGTAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: WVKTQERSDKTFLWTLTCLITRA*KQRVVK Trigger: TTTGACTACCCTTTGCTTCCATGCCCGAGTGATCAA...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CCA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTAGTGATCAAAGCTCATaGCTAGAAGGATGCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: WVKTQERSDKTFLWTLTCSDQSS*LEGCQT Trigger: AGTCTGGCATCCTTCTAGCCATGAGCTTTGATCACT...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR GCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTTCATGGCTAGAAGGATaGCAGACTCTGTCCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSSWLEG*QTLSKK Trigger: TTTCTTGGACAGAGTCTGGCATCCTTCTAGCCATGA...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTCTGGAAAAACAACAATaGGAACAAAGCTACGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSLEKQQ*EQSYGG Trigger: TCCTCCGTAGCTTTGTTCTCATTGTTGTTTTTCCAG...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CCA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCCATGGCTTCCATTCCTaGAAAGCCTGTAAGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: IYMSWCIERDQRTTIWGVHGFHS*KACKNK Trigger: TTTATTCTTACAGGCTTTCCAGGAATGGAAGCCATG...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR TCA 90 bp | ATTTTGTTTCCACTTTCTCCAATTAGAGGCAACATGAGACCCAGAGAGATAGGATCAAGGAGTTTCCTATaGTGGATATGGCATAGAATA | + |
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Preference number: 4 (lower is better) Translates to: ILFPLSPIRGNMRPREIGSRSFL*WIWHRI Trigger: TATTCTATGCCATATCCATCATAGGAAACTCCTTGA...TCCTATCTCTCTGGGTCTCATGTTGCCTCTAATTGGAGAAAGTGGAAACAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS GCA 90 bp | AACAACAATGAGAACAAAGCTACGGAGGACTGTTCCCAGGCCCATTaGCACAATGCGAGCATTGGTGAGCACCGTGGCATAGCGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: NNNENKATEDCSQAH*HNASIGEHRGIAQW Trigger: CCACTGCGCTATGCCACGGTGCTCACCAATGCTCGCATTGTGGCAATGGGCCTGGGAACAGTCCTCCGTAGCTTTGTTCTCATTGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS TCA 90 bp | GGTGGCAGAAGGGCAGCCTGTGCAAAAGCACTGGAAAAACAACAATaGGAACAAAGCTACGGAGGACTGTTCCCAGGCCCATTGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: GGRRAACAKALEKQQ*EQSYGGLFPGPLPQ Trigger: TTGTGGCAATGGGCCTGGGAACAGTCCTCCGTAGCTTTGTTCTCATTGTTGTTTTTCCAGTGCTTTTGCACAGGCTGCCCTTCTGCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS CCA 90 bp | GAGGATGTTCTGAGGGTGGCAGAAGGGCAGCCTGTGCAAAAGCACTaGAAAAACAACAATGAGAACAAAGCTACGGAGGACTGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EDVLRVAEGQPVQKH*KNNNENKATEDCSQ Trigger: CTGGGAACAGTCCTCCGTAGCTTTGTTCTCATTGTTGTTTTTCCAGTGCTTTTGCACAGGCTGCCCTTCTGCCACCCTCAGAACATCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CAA 90 bp | TGCAAGTTCTTAACCCAGAAGGGATCCTGTTTAAAGGAAATAAGAGGACAAAGTCTGTTCCCAGGCCCATaGCCACAATGCGAGCATTGG | + |
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Preference number: 5 (lower is better) Translates to: CKFLTQKGSCLKEIRGQSLFPGP*PQCEHW Trigger: CCAATGCTCGCATTGTGGCAATGGGCCTGGGAACAG...ACTTTGTCCTCTTATTTCCTTTAAACAGGATCCCTTCTGGGTTAAGAACTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CAA 90 bp | TGGGTTAAGACTCAGGAAAGGTCAGACAAAACATTTCTTTGGACATTGACGTGTTGGGACACACATGTGTaGAGTGTCTTCAGACGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WVKTQERSDKTFLWTLTCWDTHV*SVFRRS Trigger: GGAGCGTCTGAAGACACTCAACACATGTGTGTCCCA...ACACGTCAATGTCCAAAGAAATGTTTTGTCTGACCTTTCCTGAGTCTTAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS-3UTR CAA 90 bp | ATATACATGTCATGGTGTATAGAGAGAGATCAGAGGACAACAATTTGGGGAGTCAAGCAAGCATTAAAGTaGATCACTCGGGCATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IYMSWCIERDQRTTIWGVKQALK*ITRAWK Trigger: CTTCCATGCCCGAGTGATCAACTTTAATGCTTGCTT...GACTCCCCAAATTGTTGTCCTCTGATCTCTCTCTATACACCATGACATGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS CCA 72 bp | AGGGAGAGACAGCCAGGGTTCCATGGCTTCCATTCCTaGAAAGCCTGTAAGAATAAAGCTGGGAACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RERQPGFHGFHS*KACKNKAGNLR Trigger: TCTCAGGTTCCCAGCTTTATTCTTACAGGCTTTCCAGGAATGGAAGCCATGGAACCCTGGCTGTCTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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| CDS GCA 72 bp | AGATCGCAGGATAAGCACATAAGAGATGAGAATGAGTaGAGAGTCCAGGCCAAAGGTGAGCAACACGATGGA | + |
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Preference number: 6 (lower is better) Translates to: RSQDKHIRDENE*RVQAKGEQHDG Trigger: TCCATCGTGTTGCTCACCTTTGGCCTGGACTCTGCACTCATTCTCATCTCTTATGTGCTTATCCTGCGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057104.7 |
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