RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR643 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090219, ENSMUSG00000109824

Ensembl transcript IDs: ENSMUST00000074064.5, ENSMUST00000138055.2, ENSMUST00000217217.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACAATCATTGATGCTAAGAGTGGTCCAGGTGCCTCTAATTTCATaGTTCGTGAAAACTGGGTGTGCTGTTCTTGTCATCAGAATCTTG +
Preference number: 1 (lower is better)
Translates to: TQSLMLRVVQVPLIS*FVKTGCAVLVIRIL
Trigger: CAAGATTCTGATGACAAGAACAGCACACCCAGTTTTCACGAAGCATGAAATTAGAGGCACCTGGACCACTCTTAGCATCAATGATTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR GCA 90 bp CAGCCATGTTGGGCCTCCAGTCCTGGAATGCCAGTTAGGAAGATTGATAGGAGGACTTTCATTGTTCTCTaGTCCCATGACACCAACCGT +
Preference number: 2 (lower is better)
Translates to: QPCWASSPGMPVRKIDRRTFIVL*SHDTNR
Trigger: ACGGTTGGTGTCATGGGAGCAGAGAACAATGAAAGT...CCTCCTATCAATCTTCCTAACTGGCATTCCAGGACTGGAGGCCCAACATGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR TCA 90 bp GCAGTTTATGCAGAGATTTATCACACACAATCATTGATGCTAAGAGTGGTCCAGTACTCGCCTCCTCGGTaGTGGCCAGCATGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: AVYAEIYHTQSLMLRVVQYSPPR*WPAWRG
Trigger: TCCTCTCCATGCTGGCCATCACCGAGGAGGCGAGTA...CTGGACCACTCTTAGCATCAATGATTGTGTGTGATAAATCTCTGCATAAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 90 bp CCTGGAATGCCAGTTAGGAAGATTGATAGGAGGTCAAGACTTTCATaGTTCTCTGCTCCCATGACACCAACCGTAGAGATAAGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: PGMPVRKIDRRSRLS*FSAPMTPTVEISFH
Trigger: GTGAAAACTTATCTCTACGGTTGGTGTCATGGGAGCAGAGAACAATGAAAGTCTTGACCTCCTATCAATCTTCCTAACTGGCATTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 90 bp TCATGGAGAGCTGACTCTTGCTGCACTGCTATCATAATTAGGCTGTaGCCCACAATGGCAACAATGTACATGATGAAAAAGGGAATGGAG +
Preference number: 2 (lower is better)
Translates to: SWRADSCCTAIIIRL*PTMATMYMMKKGME
Trigger: CTCCATTCCCTTTTTCATCATGTACATTGTTGCCATTGTGGGCAACAGCCTAATTATGATAGCAGTGCAGCAAGAGTCAGCTCTCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR GCA 90 bp GTTCTACAAAAGGCTGATCAAATGTCTCTGAAAGAGATGGTTCGCTTTGCGAAGCCTCCAGTCCTGGAATaGCAGTTAGGAAGATTGATA +
Preference number: 2 (lower is better)
Translates to: VLQKADQMSLKEMVRFAKPPVLE*QLGRLI
Trigger: TATCAATCTTCCTAACTGGCATTCCAGGACTGGAGG...CTTCGCAAAGCGAACCATCTCTTTCAGAGACATTTGATCAGCCTTTTGTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR TCA 90 bp GCAGTTTATGCAGAGATTTATCACACACAATCATTGATGCTAAGAGTGGTCCAGTTCACCTCAGTTTTCTaGCCAGGAATCTCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: AVYAEIYHTQSLMLRVVQFTSVF*PGISPV
Trigger: AACAGGAGAGATTCCTGGTCAGAAAACTGAGGTGAA...CTGGACCACTCTTAGCATCAATGATTGTGTGTGATAAATCTCTGCATAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 90 bp GTAGGAAACAAAGCAGTTTATGCAGAGATTTATCACACACAATCATaGATGCTAAGAGTGGTCCAGGTGCCTCTAATTTCATGCTTCGTG +
Preference number: 2 (lower is better)
Translates to: VGNKAVYAEIYHTQS*MLRVVQVPLISCFV
Trigger: CACGAAGCATGAAATTAGAGGCACCTGGACCACTCTTAGCATCAATGATTGTGTGTGATAAATCTCTGCATAAACTGCTTTGTTTCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR TCA 90 bp AGAGATAAGTTTTCACCTCAGTTTTCTGACCAGGAATCTCTCCTGTTTCAAAAAACTCCTTCCAGACTCTaGTTTTATCAGTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: RDKFSPQFSDQESLLFQKTPSRL*FYQSSV
Trigger: TACAGAAGACTGATAAAATCAGAGTCTGGAAGGAGT...TTTTTGAAACAGGAGAGATTCCTGGTCAGAAAACTGAGGTGAAAACTTATCTCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR GCA 72 bp AGGAACAGGTACATTGGCTCATGGAGAGCTGACTCTTaGTGCACTGCTATCATAATTAGGCTGTTGCCCACA +
Preference number: 3 (lower is better)
Translates to: RNRYIGSWRADS*CTAIIIRLLPT
Trigger: TGTGGGCAACAGCCTAATTATGATAGCAGTGCAGCAAGAGTCAGCTCTCCATGAGCCAATGTACCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR GCA 72 bp AACAGGTACATTGGCTCATGGAGAGCTGACTCTTGCTaGACTGCTATCATAATTAGGCTGTTGCCCACAATG +
Preference number: 3 (lower is better)
Translates to: NRYIGSWRADSC*TAIIIRLLPTM
Trigger: CATTGTGGGCAACAGCCTAATTATGATAGCAGTGCAGCAAGAGTCAGCTCTCCATGAGCCAATGTACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR GCA 72 bp AATGTCTCTGAAAGAGATGGTTCGCTTTGCGAAGCATaGTTCTCCACTGGTCCATGTTCTCATGGCCAATAT +
Preference number: 3 (lower is better)
Translates to: NVSERDGSLCEA*FSTGPCSHGQY
Trigger: ATATTGGCCATGAGAACATGGACCAGTGGAGAAGCATGCTTCGCAAAGCGAACCATCTCTTTCAGAGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR GCA 72 bp TTGATGCTAAGAGTGGTCCAGGTGCCTCTAATTTCATaGTTCGTGAAAACTGGGTGTGCTGTTCTTGTCATC +
Preference number: 3 (lower is better)
Translates to: LMLRVVQVPLIS*FVKTGCAVLVI
Trigger: GATGACAAGAACAGCACACCCAGTTTTCACGAAGCATGAAATTAGAGGCACCTGGACCACTCTTAGCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR CAA 90 bp GTTCTACAAAAGGCTGATCAAATGTCTCTGAAAGAGATGGTTCGCTTTGCGAAGAGGTCAAGACTTTCATaGTTCTCTGCTCCCATGACA +
Preference number: 3 (lower is better)
Translates to: VLQKADQMSLKEMVRFAKRSRLS*FSAPMT
Trigger: TGTCATGGGAGCAGAGAACAATGAAAGTCTTGACCT...CTTCGCAAAGCGAACCATCTCTTTCAGAGACATTTGATCAGCCTTTTGTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR TCA 72 bp TCTTTTCTGTTCTACAAAAGGCTGATCAAATGTCTCTaGAAGAGATGGTTCGCTTTGCGAAGCATGCTTCTC +
Preference number: 3 (lower is better)
Translates to: SFLFYKRLIKCL*KRWFALRSMLL
Trigger: GAGAAGCATGCTTCGCAAAGCGAACCATCTCTTTCAGAGACATTTGATCAGCCTTTTGTAGAACAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR-3UTR CAA 90 bp AAAGCAGTTTATGCAGAGATTTATCACACACAATCATTGATGCTAAGAGTGGTCATCATAATTAGGCTGTaGCCCACAATGGCAACAATG +
Preference number: 3 (lower is better)
Translates to: KAVYAEIYHTQSLMLRVVIIIRL*PTMATM
Trigger: CATTGTTGCCATTGTGGGCAACAGCCTAATTATGAT...GACCACTCTTAGCATCAATGATTGTGTGTGATAAATCTCTGCATAAACTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CCA 72 bp TCATCAGAATCTTGTTACCAAAATAGTAGCTTTCATTaGATGATATCACTGTTGTTCCCTTATAATGTCCTC +
Preference number: 3 (lower is better)
Translates to: SSESCYQNSSFH*MISLLFPYNVL
Trigger: GAGGACATTATAAGGGAACAACAGTGATATCATCCAATGAAAGCTACTATTTTGGTAACAAGATTCTGATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 72 bp GTTGGGCCTCCAGTCCTGGAATGCCAGTTAGGAAGATaGATAGGAGGTCAAGACTTTCATTGTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGPPVLECQLGR*IGGQDFHCSLL
Trigger: GAGCAGAGAACAATGAAAGTCTTGACCTCCTATCAATCTTCCTAACTGGCATTCCAGGACTGGAGGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 72 bp CCAGTTAGGAAGATTGATAGGAGGTCAAGACTTTCATaGTTCTCTGCTCCCATGACACCAACCGTAGAGATA +
Preference number: 4 (lower is better)
Translates to: PVRKIDRRSRLS*FSAPMTPTVEI
Trigger: TATCTCTACGGTTGGTGTCATGGGAGCAGAGAACAATGAAAGTCTTGACCTCCTATCAATCTTCCTAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
3UTR CAA 72 bp AAAGCAGTTTATGCAGAGATTTATCACACACAATCATaGATGCTAAGAGTGGTCCAGGTGCCTCTAATTTCA +
Preference number: 4 (lower is better)
Translates to: KAVYAEIYHTQS*MLRVVQVPLIS
Trigger: TGAAATTAGAGGCACCTGGACCACTCTTAGCATCAATGATTGTGTGTGATAAATCTCTGCATAAACTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138055.2
CDS CCA 90 bp GACACCAAGAAGCAGGAACAACCAGTGCTGGGAGGTCTCCATTCCTaGCAGTCCTGTCAAGATGAAGGGAGGCAACCCAGAGCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: DTKKQEQPVLGGLHS*QSCQDEGRQPRAVV
Trigger: CACAACAGCTCTGGGTTGCCTCCCTTCATCTTGACAGGACTGCCAGGAATGGAGACCTCCCAGCACTGGTTGTTCCTGCTTCTTGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS CCA 90 bp TATATTATTAATGGTAATATCCCCACAGGGCAGGCGAATCATGTCTaGATGCAGACAGTAGGCATGGGAAAGCACATTAGCCTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: YIINGNIPTGQANHV*MQTVGMGKHISLAE
Trigger: TTCTGCAAGGCTAATGTGCTTTCCCATGCCTACTGTCTGCATCCAGACATGATTCGCCTGCCCTGTGGGGATATTACCATTAATAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS TCA 72 bp GCTGGGAGGTCTCCATTCCTGGCAGTCCTGTCAAGATaGAGGGAGGCAACCCAGAGCTGTTGTGGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: AGRSPFLAVLSR*REATQSCCGLH
Trigger: GTGAAGCCCACAACAGCTCTGGGTTGCCTCCCTTCATCTTGACAGGACTGCCAGGAATGGAGACCTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS CCA 72 bp AAGCAGGAACAACCAGTGCTGGGAGGTCTCCATTCCTaGCAGTCCTGTCAAGATGAAGGGAGGCAACCCAGA +
Preference number: 6 (lower is better)
Translates to: KQEQPVLGGLHS*QSCQDEGRQPR
Trigger: TCTGGGTTGCCTCCCTTCATCTTGACAGGACTGCCAGGAATGGAGACCTCCCAGCACTGGTTGTTCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS CAA 90 bp GAGGCACAAACAGATAAACAAGTGAGAGCAGGGTGTGCACATACCTaGGGGCATGCCTCCCATAGCGAGCAGCCATGGACACACCTACCA +
Preference number: 6 (lower is better)
Translates to: EAQTDKQVRAGCAHT*GHASHSEQPWTHLP
Trigger: TGGTAGGTGTGTCCATGGCTGCTCGCTATGGGAGGCATGCCCCAAGGTATGTGCACACCCTGCTCTCACTTGTTTATCTGTTTGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS CAA 72 bp ACAGATAAACAAGTGAGAGCAGGGTGTGCACATACCTaGGGGCATGCCTCCCATAGCGAGCAGCCATGGACA +
Preference number: 6 (lower is better)
Translates to: TDKQVRAGCAHT*GHASHSEQPWT
Trigger: TGTCCATGGCTGCTCGCTATGGGAGGCATGCCCCAAGGTATGTGCACACCCTGCTCTCACTTGTTTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS CCA 72 bp AATGGTAATATCCCCACAGGGCAGGCGAATCATGTCTaGATGCAGACAGTAGGCATGGGAAAGCACATTAGC +
Preference number: 6 (lower is better)
Translates to: NGNIPTGQANHV*MQTVGMGKHIS
Trigger: GCTAATGTGCTTTCCCATGCCTACTGTCTGCATCCAGACATGATTCGCCTGCCCTGTGGGGATATTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2
CDS GCA 72 bp GCAACCTCTTCAGAAGGAAAGGTAATGGGAAAATCATaGAGAAACTTCGAAAGAAAACACATACACCCATCC +
Preference number: 6 (lower is better)
Translates to: ATSSEGKVMGKS*RNFERKHIHPS
Trigger: GGATGGGTGTATGTGTTTTCTTTCGAAGTTTCTGCATGATTTTCCCATTACCTTTCCTTCTGAAGAGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074064.5
ENSMUST00000217217.2