Pregenerated sensors for OLFR642 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049797Ensembl transcript IDs: ENSMUST00000052660.2, ENSMUST00000214299.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTCTATCAATGTCTGGCCCCCTGTGTCATGTGTATTGTGTTCATaGCTATGGGTGTCAGAAGGTTTCCGTCTCTTCATGGCTTTGACT | + |
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Preference number: 1 (lower is better) Translates to: SSINVWPPVSCVLCS*LWVSEGFRLFMALT Trigger: AGTCAAAGCCATGAAGAGACGGAAACCTTCTGACACCCATAGCCATGAACACAATACACATGACACAGGGGGCCAGACATTGATAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 90 bp | GGGATGTACAATCCCACCTTTGCTCCAGCCTCTATCTATAGATATTaGTTCCACTGGTTGCAAAACTATAGCACTCTCTCCTACCTGATT | + |
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Preference number: 1 (lower is better) Translates to: GMYNPTFAPASIYRY*FHWLQNYSTLSYLI Trigger: AATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGGATTGTACATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 90 bp | AATCCCACCTTTGCTCCAGCCTCTATCTATAGATATTGCTTCCACTaGTTGCAAAACTATAGCACTCTCTCCTACCTGATTCGCTATACT | + |
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Preference number: 1 (lower is better) Translates to: NPTFAPASIYRYCFH*LQNYSTLSYLIRYT Trigger: AGTATAGCGAATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 90 bp | GATATTGCTTCCACTGGTTGCAAAACTATAGCACTCTCTCCTACCTaGTTCGCTATACTCTTCCTGCTACACCTTGAGAACCTTCTATAT | + |
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Preference number: 1 (lower is better) Translates to: DIASTGCKTIALSPT*FAILFLLHLENLLY Trigger: ATATAGAAGGTTCTCAAGGTGTAGCAGGAAGAGTATAGCGAATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 90 bp | GAGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTaGACCATCTTACTAGCCTTTTATCTTCCATTTATTTATTTATTT | + |
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Preference number: 1 (lower is better) Translates to: ELLPRSSGVCATSST*TILLAFYLPFIYLF Trigger: AAATAAATAAATAAATGGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 90 bp | GTATGTTTGAATTTCGCTTTTCTGTTGCTTTGTTTACAGTCAGGGTaGGCATTTAGAGCCAATACAAGTGTATGCTCTCTTGTGTTTAGG | + |
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Preference number: 1 (lower is better) Translates to: VCLNFAFLLLCLQSG*AFRANTSVCSLVFR Trigger: CCTAAACACAAGAGAGCATACACTTGTATTGGCTCTAAATGCTCACCCTGACTGTAAACAAAGCAACAGAAAAGCGAAATTCAAACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 90 bp | AGAGCCAATACAAGTGTATGCTCTCTTGTGTTTAGGTCACTGTCCTaGTACTTGGTCCATATAACTTTAGCTTCTAAAACTTATTTTACC | + |
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Preference number: 1 (lower is better) Translates to: RANTSVCSLVFRSLS*YLVHITLASKTYFT Trigger: GGTAAAATAAGTTTTAGAAGCTAAAGTTATATGGACCAAGTAGCAGGACAGTGACCTAAACACAAGAGAGCATACACTTGTATTGGCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 90 bp | GTACCAGAATTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATaGGCTTTGTTCCTAGTTTTATCAGTCTTTCACAAATTCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: VPEFSNLQPLKLCNV*ALFLVLSVFHKFIY Trigger: GTAGATGAATTTGTGAAAGACTGATAAAACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAATTCTGGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTGTCTCTTCATGGCTTTaGCTCTACAACTTCCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SSYPGHQECVQPPLPEPSVSSWL*LYNFPV Trigger: GACAGGGAAGTTGTAGAGTCAAAGCCATGAAGAGAC...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTGCCAGGAGGCAGGAGTaGGTGGGTTGGGGATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FSNLQPLKLCNVWALFLVARRQE*VGWGSG Trigger: CCCTGATCCCCAACCCACCCACTCCTGCCTCCTGGC...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACCAGGAGTGGGTGGGTTaGGGATCAGGGATGCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNQEWVG*GSGMRE Trigger: CTCCCGCATCCCTGATCCCCAACCCACCCACTCCTG...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 90 bp | AGCAAGGGAAGCTCTCAGAAGCTGATTTTGTCCTACAAAACTCTGTaGGATATGGAGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACC | + |
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Preference number: 2 (lower is better) Translates to: SKGSSQKLILSYKTL*DMELLPRSSGVCAT Trigger: GGTTGCACACACTCCTGATGACCTGGGTAAGAGCTCCATATCCAACAGAGTTTTGTAGGACAAAATCAGCTTCTGAGAGCTTCCCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTGTGTGCAGCCCATTGTaGTTAGTTCTATCAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSYPGHQECVQPPLPEPSVCSPL*LVLSMS Trigger: AGACATTGATAGAACTAAGCACAATGGGCTGCACAC...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 90 bp | CATGTCTGTGCCATGACAAGCAAGGGAAGCTCTCAGAAGCTGATTTaGTCCTACAAAACTCTGTTGGATATGGAGCTCTTACCCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: HVCAMTSKGSSQKLI*SYKTLLDMELLPRS Trigger: TGACCTGGGTAAGAGCTCCATATCCAACAGAGTTTTGTAGGACAAAATCAGCTTCTGAGAGCTTCCCTTGCTTGTCATGGCACAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 90 bp | CTTAGACCATGTCCTGGTCATTTCTCTGTAAAAGTGTGCAGCCCATaGTGCTTAGTTCTATCAATGTCTGGCCCCCTGTGTCATGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LRPCPGHFSVKVCSP*CLVLSMSGPLCHVY Trigger: ATACACATGACACAGGGGGCCAGACATTGATAGAACTAAGCACAATGGGCTGCACACTTTTACAGAGAAATGACCAGGACATGGTCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTAGATATTGCTTCCACTaGTTGCAAAACTATAGCACT | + |
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Preference number: 2 (lower is better) Translates to: SSYPGHQECVQPPLPEPSRYCFH*LQNYST Trigger: AGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCT...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 90 bp | CCCACCTTTGCTCCAGCCTCTATCTATAGATATTGCTTCCACTGGTaGCAAAACTATAGCACTCTCTCCTACCTGATTCGCTATACTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTFAPASIYRYCFHW*QNYSTLSYLIRYTL Trigger: AAGAGTATAGCGAATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 90 bp | AGAGACCGATGTATTCTGTGTTCTGTGGGATGTACAATCCCACCTTaGCTCCAGCCTCTATCTATAGATATTGCTTCCACTGGTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: RDRCILCSVGCTIPP*LQPLSIDIASTGCK Trigger: TTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGGATTGTACATCCCACAGAACACAGAATACATCGGTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTTACTAGCCTTTTATCTTCCTGTTTACAGTCAGGGTaGGCATTTAGAGCCAATACA | + |
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Preference number: 2 (lower is better) Translates to: RSVCNLLYLNHLTSLLSSCLQSG*AFRANT Trigger: TGTATTGGCTCTAAATGCTCACCCTGACTGTAAACA...GGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTGTTCCTTGTTATCCTTaGCATTTTGCATATTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSYPGHQECVQPPLPEPSVPCYP*HFAYLY Trigger: GTACAAATATGCAAAATGCCAAGGATAACAAGGAAC...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACGTCTCTGCTGTAGCTTaGAGAGTGCTCTTTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNVSAVA*RVLFRQ Trigger: CTGCCTAAAGAGCACTCTGCAAGCTACAGCAGAGAC...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACCTTGGTCTCAGTCTCTaGTGTAGCTTGCAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNLGLSL*CSLQSA Trigger: AGCACTCTGCAAGCTACAGCAGAGACTGAGACCAAG...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTTCCCTTAGCTGTGCCTaGGTGATGGCAGTACATATT | + |
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Preference number: 2 (lower is better) Translates to: FSNLQPLKLCNVWALFLVSLSCA*VMAVHI Trigger: AATATGTACTGCCATCACTCAGGCACAGCTAAGGGA...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTTACTAGCCTTTTATCTTCCAGGCTGTATCTTACATaGAACACAAAACACATACTC | + |
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Preference number: 2 (lower is better) Translates to: RSVCNLLYLNHLTSLLSSRLYLT*NTKHIL Trigger: GAGTATGTGTTTTGTGTTGCATGTAAGATACAGCCT...GGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTTACTAGCCTTTTATCTTCCCAACAAGTGTTTCTATaGTATCTCTATCACCTACCT | + |
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Preference number: 2 (lower is better) Translates to: RSVCNLLYLNHLTSLLSSQQVFL*YLYHLP Trigger: AGGTAGGTGATAGAGATAGCATAGAAACACTTGTTG...GGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACGTATTCTGTGTTCTGTaGGATGTACAATCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNVFCVL*DVQSHL Trigger: AAGGTGGGATTGTACATCCCACAGAACACAGAATAC...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACGTGTGTGTATGTGTATaGTCCACAAACTATCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNVCVCV*STNYLD Trigger: ATCAAGATAGTTTGTGGAGCATACACATACACACAC...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR GCA 90 bp | ACTATGGTACCAGAATTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGATTTCGCTTTTCTGTTaGTTTGTTTACAGTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TMVPEFSNLQPLKLCNVWISLFC*FVYSQG Trigger: ACCCTGACTGTAAACAAAGCAACAGAAAAGCGAAAT...CCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAATTCTGGTACCATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTCGTCTCTTCATGGCTTaGACTCTACAACTTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SSYPGHQECVQPPLPEPSRLFMA*TLQLPC Trigger: ACAGGGAAGTTGTAGAGTCAAAGCCATGAAGAGACG...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTGCAGGAGTGGGTGGGTaGGGGATCAGGGATGCGGGA | + |
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Preference number: 3 (lower is better) Translates to: FSNLQPLKLCNVWALFLVAGVGG*GIRDAG Trigger: TCCCGCATCCCTGATCCCCAACCCACCCACTCCTGC...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 72 bp | GGATATGGAGCTCTTACCCAGGTCATCAGGAGTGTGTaGAACCTCCTCTACCTGAACCATCTTACTAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: GYGALTQVIRSV*NLLYLNHLTSL Trigger: AAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCTCCATATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | GAGAGAGGGAGAGAGAGAGAACAGACTCCTGTAGTATaGGTTGAAAGCCAAGGGTTCCTTGTTATCCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ERGREREQTPVV*VESQGFLVILG Trigger: GCCAAGGATAACAAGGAACCCTTGGCTTTCAACTCATACTACAGGAGTCTGTTCTCTCTCTCTCCCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 72 bp | AATGTCTGGCCCCCTGTGTCATGTGTATTGTGTTCATaGCTATGGGTGTCAGAAGGTTTCCGTCTCTTCATG | + |
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Preference number: 3 (lower is better) Translates to: NVWPPVSCVLCS*LWVSEGFRLFM Trigger: CATGAAGAGACGGAAACCTTCTGACACCCATAGCCATGAACACAATACACATGACACAGGGGGCCAGACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 72 bp | CCTGGTCATTTCTCTGTAAAAGTGTGCAGCCCATTGTaGTTAGTTCTATCAATGTCTGGCCCCCTGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PGHFSVKVCSPL*LVLSMSGPLCH Trigger: ATGACACAGGGGGCCAGACATTGATAGAACTAAGCACAATGGGCTGCACACTTTTACAGAGAAATGACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | TATGGGTGTCAGAAGGTTTCCGTCTCTTCATGGCTTTaGCTCTACAACTTCCCTGTCATGTCTCATCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: YGCQKVSVSSWL*LYNFPVMSHLL Trigger: CAAGAGATGAGACATGACAGGGAAGTTGTAGAGTCAAAGCCATGAAGAGACGGAAACCTTCTGACACCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | TCCACTGGTTGCAAAACTATAGCACTCTCTCCTACCTaGTTCGCTATACTCTTCCTGCTACACCTTGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: STGCKTIALSPT*FAILFLLHLEN Trigger: GTTCTCAAGGTGTAGCAGGAAGAGTATAGCGAATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 72 bp | GTTTCTAAGTCAGAGACCGATGTATTCTGTGTTCTGTaGGATGTACAATCCCACCTTTGCTCCAGCCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: VSKSETDVFCVL*DVQSHLCSSLY Trigger: ATAGAGGCTGGAGCAAAGGTGGGATTGTACATCCCACAGAACACAGAATACATCGGTCTCTGACTTAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 72 bp | CCTTCCATTCTCTTTAAAGAAGGGGAGATCTCTCTATaGGTACCAGACACCCCACAGCAGGATTTCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: PSILFKEGEISL*VPDTPQQDFNF Trigger: AAAGTTGAAATCCTGCTGTGGGGTGTCTGGTACCCATAGAGAGATCTCCCCTTCTTTAAAGAGAATGGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | CCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTaGACCATCTTACTAGCCTTTTATCTTCCATTTATT | + |
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Preference number: 3 (lower is better) Translates to: PRSSGVCATSST*TILLAFYLPFI Trigger: AATAAATGGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 72 bp | CTTAGACCATGTCCTGGTCATTTCTCTGTAAAAGTGTaGAGCCCATTGTGCTTAGTTCTATCAATGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LRPCPGHFSVKV*SPLCLVLSMSG Trigger: GCCAGACATTGATAGAACTAAGCACAATGGGCTGCACACTTTTACAGAGAAATGACCAGGACATGGTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR GCA 72 bp | AATCCCACCTTTGCTCCAGCCTCTATCTATAGATATTaGTTCCACTGGTTGCAAAACTATAGCACTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: NPTFAPASIYRY*FHWLQNYSTLS Trigger: GGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTTACTAGCCTTTTATCTTCCAATTTCGCTTTTCTGTaGCTTTGTTTACAGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RSVCNLLYLNHLTSLLSSNFAFL*LCLQSG Trigger: CCCTGACTGTAAACAAAGCAACAGAAAAGCGAAATT...GGAAGATAAAAGGCTAGTAAGATGGTTCAGGTAGAGGAGGTTGCACACACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | ACTATGGTACCAGAATTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGTCATGTCTCATCTCTaGGTCTCAGTCTCTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: TMVPEFSNLQPLKLCNVWVMSHL*VSVSAV Trigger: TACAGCAGAGACTGAGACCAAGAGATGAGACATGAC...CCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAATTCTGGTACCATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | TCCTACCTGATTCGCTATACTCTTCCTGCTACACCTTaGGAACCTTCTATATCTAATAGGATACCCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SYLIRYTLPATP*EPSISNRIPSF Trigger: GAAAGAGGGTATCCTATTAGATATAGAAGGTTCTCAAGGTGTAGCAGGAAGAGTATAGCGAATCAGGTAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 72 bp | TTTGCTCCAGCCTCTATCTATAGATATTGCTTCCACTaGTTGCAAAACTATAGCACTCTCTCCTACCTGATT | + |
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Preference number: 3 (lower is better) Translates to: FAPASIYRYCFH*LQNYSTLSYLI Trigger: AATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | ACTATGGTACCAGAATTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGTCTTGAGTTGCAGATaGTGTCTAGGCTGTATCTTA | + |
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Preference number: 3 (lower is better) Translates to: TMVPEFSNLQPLKLCNVWVLSCR*CLGCIL Trigger: TAAGATACAGCCTAGACACAATCTGCAACTCAAGAC...CCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAATTCTGGTACCATAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACAAAGTGTGCAGCCCATaGTGCTTAGTTCTATCAATG | + |
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Preference number: 3 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNKVCSP*CLVLSM Trigger: CATTGATAGAACTAAGCACAATGGGCTGCACACTTT...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | AATTTCGCTTTTCTGTTGCTTTGTTTACAGTCAGGGTaGGCATTTAGAGCCAATACAAGTGTATGCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: NFAFLLLCLQSG*AFRANTSVCSL Trigger: AAGAGAGCATACACTTGTATTGGCTCTAAATGCTCACCCTGACTGTAAACAAAGCAACAGAAAAGCGAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACATTTCTGTCCAAAGTTaGTGTTTTCTCCATTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNISVQS*CFLHYP Trigger: AGGGTAATGGAGAAAACACAAACTTTGGACAGAAAT...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR TCA 72 bp | AAAGTTTGTGTTTTCTCCATTACCCTCCGTACAATTTaGCTTAGACCATGTCCTGGTCATTTCTCTGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KVCVFSITLRTI*LRPCPGHFSVK Trigger: TTTTACAGAGAAATGACCAGGACATGGTCTAAGTCAAATTGTACGGAGGGTAATGGAGAAAACACAAACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CCA 72 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATaGGCTTTGTTCCTAGTTTTATCAGTCTTTCACAAA | + |
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Preference number: 3 (lower is better) Translates to: FSNLQPLKLCNV*ALFLVLSVFHK Trigger: TTTGTGAAAGACTGATAAAACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTGGCATCAGTAAGCACTaGGGAATAATGCAAAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSYPGHQECVQPPLPEPSGISKH*GIMQRV Trigger: AACCCTTTGCATTATTCCTCAGTGCTTACTGATGCC...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR TCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTAAATCTATGGACCATTaGCACACTAATCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSYPGHQECVQPPLPEPSKSMDH*HTNHGY Trigger: GTACCCATGATTAGTGTGTCAATGGTCCATAGATTT...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR GCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTAGGGCAGCCAGCCAGTaGTCCAGACTCTGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSNLQPLKLCNVWALFLVRAASQ*SRLCIS Trigger: AGAGATGCAGAGTCTGGAGCACTGGCTGGCTGCCCT...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTACCCAGGTCATCAGGAGTGTGTGCAACCTCCTCTACCTGAACCATCTATCGAAGGCAGTCTCTaGGATATGAAAACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSYPGHQECVQPPLPEPSIEGSL*DMKTHR Trigger: TCTATGTGTTTTCATATCCCAGAGACTGCCTTCGAT...AGATGGTTCAGGTAGAGGAGGTTGCACACACTCCTGATGACCTGGGTAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR CCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTCTTCCCTGGAGGCAATaGCCAGCACAGAGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSNLQPLKLCNVWALFLVLPWRQ*PAQSAE Trigger: TTCTGCGCTCTGTGCTGGCCATTGCCTCCAGGGAAG...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | AGTTCTATCAATGTCTGGCCCCCTGTGTCATGTGTATaGTGTTCATGGCTATGGGTGTCAGAAGGTTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSINVWPPVSCV*CSWLWVSEGFR Trigger: ACGGAAACCTTCTGACACCCATAGCCATGAACACAATACACATGACACAGGGGGCCAGACATTGATAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | TGTCCTGGTCATTTCTCTGTAAAAGTGTGCAGCCCATaGTGCTTAGTTCTATCAATGTCTGGCCCCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CPGHFSVKVCSP*CLVLSMSGPLC Trigger: ACACAGGGGGCCAGACATTGATAGAACTAAGCACAATGGGCTGCACACTTTTACAGAGAAATGACCAGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | GCTCCAGCCTCTATCTATAGATATTGCTTCCACTGGTaGCAAAACTATAGCACTCTCTCCTACCTGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: APASIYRYCFHW*QNYSTLSYLIR Trigger: GCGAATCAGGTAGGAGAGAGTGCTATAGTTTTGCAACCAGTGGAAGCAATATCTATAGATAGAGGCTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | AGCTCTCAGAAGCTGATTTTGTCCTACAAAACTCTGTaGGATATGGAGCTCTTACCCAGGTCATCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSQKLILSYKTL*DMELLPRSSGV Trigger: CACTCCTGATGACCTGGGTAAGAGCTCCATATCCAACAGAGTTTTGTAGGACAAAATCAGCTTCTGAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR TCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACACACTCCCAGGTCGTTaGCAGACAGAAGGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNTLPGR*QTEGTR Trigger: TCTTGTCCCTTCTGTCTGTCAACGACCTGGGAGTGT...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR TCA 90 bp | TTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTTGTACACAACGCCCATACATGCTGTTaGTGGTGGTATCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAKGSLLSLAFCIFVHNAHTCC*WWYLHR Trigger: CCTGTGGAGATACCACCATCAACAGCATGTATGGGC...GTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | GGTGAGCATTTAGAGCCAATACAAGTGTATGCTCTCTaGTGTTTAGGTCACTGTCCTGCTACTTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: GEHLEPIQVYAL*CLGHCPATWSI Trigger: TATGGACCAAGTAGCAGGACAGTGACCTAAACACAAGAGAGCATACACTTGTATTGGCTCTAAATGCTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | TGTATTCTGTGTTCTGTGGGATGTACAATCCCACCTTaGCTCCAGCCTCTATCTATAGATATTGCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CILCSVGCTIPP*LQPLSIDIAST Trigger: AGTGGAAGCAATATCTATAGATAGAGGCTGGAGCAAAGGTGGGATTGTACATCCCACAGAACACAGAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR GCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTAGGGATGTGAACTTGTaGACATACTCTGGCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSNLQPLKLCNVWALFLVRDVNL*TYSGAC Trigger: ACATGCGCCAGAGTATGTGCACAAGTTCACATCCCT...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR GCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTCCCAGTAACATCTTGTaGAGTCTCCTACGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSNLQPLKLCNVWALFLVPSNIL*SLLRIS Trigger: GGAGATTCGTAGGAGACTGCACAAGATGTTACTGGG...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR CCA 90 bp | TTTCCGTCTCTTCATGGCTTTGACTCTACAACTTCCCTGTCATGTCTCATCTCTAATAGGATTGAGCATTaGAGGCACAAAGAGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSLHGFDSTTSLSCLISNRIEH*RHKEID Trigger: GTCTATCTCTTTGTGCCTCCAATGCTCAATCCTATT...AGAGATGAGACATGACAGGGAAGTTGTAGAGTCAAAGCCATGAAGAGACGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR TCA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTGCAGTCTCTGGGATATaGAAACACATAGAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSNLQPLKLCNVWALFLVAVSGI*KHIEAS Trigger: GCTTGCTTCTATGTGTTTTCATATCCCAGAGACTGC...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | CCAAGGGTTCCTTGTTATCCTTGGCATTTTGCATATTaGTACACAACTGAGTATAGAGTTGCCTTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRVPCYPWHFAY*YTTEYRVALFP Trigger: GGGAAATAAGGCAACTCTATACTCAGTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | GTTGAAAGCCAAGGGTTCCTTGTTATCCTTGGCATTTaGCATATTTGTACACAACTGAGTATAGAGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VESQGFLVILGI*HICTQLSIELP Trigger: AGGCAACTCTATACTCAGTTGTGTACAAATATGCAAAATGCCAAGGATAACAAGGAACCCTTGGCTTTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | GTATGCTCTCTTGTGTTTAGGTCACTGTCCTGCTACTaGGTCCATATAACTTTAGCTTCTAAAACTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLVFRSLSCY*VHITLASKTYF Trigger: AAAATAAGTTTTAGAAGCTAAAGTTATATGGACCAAGTAGCAGGACAGTGACCTAAACACAAGAGAGCATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| 3UTR CAA 72 bp | AATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTaGTTCCTAGTTTTATCAGTCTTTCACAAATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NLQPLKLCNVWA*FLVLSVFHKFI Trigger: GATGAATTTGTGAAAGACTGATAAAACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR CAA 90 bp | TTTCCGTCTCTTCATGGCTTTGACTCTACAACTTCCCTGTCATGTCTCATCTCTAGCCCATACATGCTGTaGATGGTGGTATCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSLHGFDSTTSLSCLISSPYML*MVVSPQ Trigger: CTGTGGAGATACCACCATCAACAGCATGTATGGGCT...AGAGATGAGACATGACAGGGAAGTTGTAGAGTCAAAGCCATGAAGAGACGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS-3UTR CAA 90 bp | TTTAGCAATCTCCAGCCTCTGAAACTTTGTAATGTATGGGCTTTGTTCCTAGTTGTACCCAGTAACATCTaGTGCAGTCTCCTACGAATC | + |
|
Preference number: 5 (lower is better) Translates to: FSNLQPLKLCNVWALFLVVPSNI*CSLLRI Trigger: GATTCGTAGGAGACTGCACAAGATGTTACTGGGTAC...AACTAGGAACAAAGCCCATACATTACAAAGTTTCAGAGGCTGGAGATTGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214299.2 |
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| CDS TCA 72 bp | TGGGCCAGGCAAGCATCGAAGGCAGTCTCTGGGATATaGAAACACATAGAAGCAAGCACCGTTGGCAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: WARQASKAVSGI*KHIEASTVGNV Trigger: TACATTGCCAACGGTGCTTGCTTCTATGTGTTTTCATATCCCAGAGACTGCCTTCGATGCTTGCCTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052660.2 ENSMUST00000214299.2 |
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| CDS CAA 90 bp | TGGTGCAAACTCTGTTCCTCCTTTATGATGAAGAGAATCAGGGCATaGCCTACTATGGAGATAACATACAGCAGCAGCAGGAGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WCKLCSSFMMKRIRA*PTMEITYSSSRRAA Trigger: GGCTGCCCTCCTGCTGCTGCTGTATGTTATCTCCATAGTAGGCAATGCCCTGATTCTCTTCATCATAAAGGAGGAACAGAGTTTGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052660.2 ENSMUST00000214299.2 |
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| CDS CAA 72 bp | CTCTGTTCCTCCTTTATGATGAAGAGAATCAGGGCATaGCCTACTATGGAGATAACATACAGCAGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCSSFMMKRIRA*PTMEITYSSSR Trigger: CCTGCTGCTGCTGTATGTTATCTCCATAGTAGGCAATGCCCTGATTCTCTTCATCATAAAGGAGGAACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052660.2 ENSMUST00000214299.2 |
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