Pregenerated sensors for OLFR64 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063615Ensembl transcript IDs: ENSMUST00000081748.6
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTATGACAACCCAGCCCACCTGAAGCTTTTGCATGTAATGCTTTaGTCTCAGAACATTCTTGGTCTCATTAACACACGTTGGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AYDNPAHLKLLHVML*SQNILGLINTRWLL Trigger: CAAGAGCCAACGTGTGTTAATGAGACCAAGAATGTTCTGAGAGCAAAGCATTACATGCAAAAGCTTCAGGTGGGCTGGGTTGTCATAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR GCA 90 bp | ATCTCAGTCTTCTCTGACCTCTCTTGTGCCTGCTTTCCTCTCACCTaGCTTAAATCCATTATTGTCAGCACCCATGATTTGAAAAACACA | + |
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Preference number: 1 (lower is better) Translates to: ISVFSDLSCACFPLT*LKSIIVSTHDLKNT Trigger: TGTGTTTTTCAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGAGGTCAGAGAAGACTGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR GCA 90 bp | GAAGAATCATTTTTCTGTGGGATTTTGGCCATGTGTAGTTGTCTATaGTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGT | + |
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Preference number: 1 (lower is better) Translates to: EESFFCGILAMCSCL*SGGWSHMPCSHNIG Trigger: ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACTACACATGGCCAAAATCCCACAGAAAAATGATTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR TCA 90 bp | ATGGAGATGGAAGTCATGGTACTTTGTAAGACATCTAGTAGAGGATaGGTCTCTAAGGCCAATGTGATGAGTGCAGAGTTCATAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: MEMEVMVLCKTSSRG*VSKANVMSAEFIEK Trigger: TTTTTCTATGAACTCTGCACTCATCACATTGGCCTTAGAGACTCATCCTCTACTAGATGTCTTACAAAGTACCATGACTTCCATCTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR TCA 90 bp | TTCCTCTCACCTGCCTTAAATCCATTATTGTCAGCACCCATGATTTaGAAAACACAAGTGAATCTCTGTTCCTTCTTTCTATGGCCTATG | + |
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Preference number: 1 (lower is better) Translates to: FLSPALNPLLSAPMI*KTQVNLCSFFLWPM Trigger: CATAGGCCATAGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGAGTCTGGTCTGCAAAGTaGGTTCCAGGACAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRVWSAK*VPGQPE Trigger: CTCTGGCTGTCCTGGAACTCACTTTGCAGACCAGAC...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGATCTTTCTATGGCCTATaGCAACCCAGCCCACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRSFYGL*QPSPPE Trigger: TTCAGGTGGGCTGGGTTGTCATAGGCCATAGAAAGA...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAGAAGAAGACATTGGGAAGCTGCAAGAGGAACATTTTGAAGGAAGGGCTAGCCAGACAGATTTCTaGGTTCAAGGCCAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LREEDIGKLQEEHFEGRASQTDF*VQGQSG Trigger: ACCAGACTGGCCTTGAACTCAGAAATCTGTCTGGCT...AGCCCTTCCTTCAAAATGTTCCTCTTGCAGCTTCCCAATGTCTTCTTCTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGAGCATGCACCCAATTTTaGGACTCACAATTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRACTQF*DSQFLF Trigger: AAAAAGAAATTGTGAGTCTCAAAATTGGGTGCATGC...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTTTGCATGTAATGCTTTaGTCTCAGAACATTCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SCLCSGGWSHMPCSHNIGLHVML*SQNILG Trigger: ACCAAGAATGTTCTGAGAGCAAAGCATTACATGCAA...ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTTGGAGATGGAAGTCATaGTACTTTGTAAGACATCTA | + |
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Preference number: 2 (lower is better) Translates to: SCLCSGGWSHMPCSHNIGWRWKS*YFVRHL Trigger: TAGATGTCTTACAAAGTACCATGACTTCCATCTCCA...ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAATGAACAAGTTTCATaGGGAAACAGGATTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SCLCSGGWSHMPCSHNIGNEQVS*GNRIKL Trigger: AAGCTTAATCCTGTTTCCCCATGAAACTTGTTCATT...ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR CAA 90 bp | TTTCCTCTCACCTGCCTTAAATCCATTATTGTCAGCACCCATGATTaGAAAAACACAAGTGAATCTCTGTTCCTTCTTTCTATGGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: FPLTCLKSIIVSTHD*KNTSESLFLLSMAY Trigger: ATAGGCCATAGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR GCA 90 bp | TATCTACCCAGTAATGTCGCACTCCACTTTTGTAATCTAAGTTACTGTTACCTTTGCTTTCCTCTCACCTaGCTTAAATCCATTATTGTC | + |
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Preference number: 2 (lower is better) Translates to: YLPSNVALHFCNLSYCYLCFPLT*LKSIIV Trigger: GACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCA...AAGGTAACAGTAACTTAGATTACAAAAGTGGAGTGCGACATTACTGGGTAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CCA 90 bp | TATCTACCCAGTAATGTCGCACTCCACTTTTGTAATCTAAGTTACTGTTACCTTCAGGAGATAGTCCATTaGGTTTCAATTCTCATAGTT | + |
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Preference number: 2 (lower is better) Translates to: YLPSNVALHFCNLSYCYLQEIVH*VSILIV Trigger: AACTATGAGAATTGAAACCCAATGGACTATCTCCTG...AAGGTAACAGTAACTTAGATTACAAAAGTGGAGTGCGACATTACTGGGTAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR TCA 72 bp | ATCCCAGCACTTGGTAGGCAGAGCCAGACAGATTTCTaGGTTCAAGGCCAGTCTGGTCTGCAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALGRQSQTDF*VQGQSGLQSEF Trigger: GAACTCACTTTGCAGACCAGACTGGCCTTGAACTCAGAAATCTGTCTGGCTCTGCCTACCAAGTGCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CAA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGAGCCCACCTGAAGCTTTaGCATGTAATGCTTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRAHLKL*HVMLCS Trigger: AGAGCAAAGCATTACATGCAAAAGCTTCAGGTGGGC...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR GCA 72 bp | TTCTCTGACCTCTCTTGTGCCTGCTTTCCTCTCACCTaGCTTAAATCCATTATTGTCAGCACCCATGATTTG | + |
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Preference number: 3 (lower is better) Translates to: FSDLSCACFPLT*LKSIIVSTHDL Trigger: CAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGAGGTCAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR GCA 72 bp | TTTTTCTGTGGGATTTTGGCCATGTGTAGTTGTCTATaGTCTGGTGGATGGTCCCACATGCCATGTTCACAT | + |
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Preference number: 3 (lower is better) Translates to: FFCGILAMCSCL*SGGWSHMPCSH Trigger: ATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACTACACATGGCCAAAATCCCACAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTGTGCCTGCTTTCCTCTCACCTGCCTTAAATCCATTATTGTCAGCACCCTTTGCATGTAATGCTTaGCTCTCAGAACATTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SLVPAFLSPALNPLLSAPFACNA*LSEHSW Trigger: CCAAGAATGTTCTGAGAGCAAAGCATTACATGCAAA...GGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR CCA 72 bp | ATTTTGGCCATGTGTAGTTGTCTATGCTCTGGTGGATaGTCCCACATGCCATGTTCACATAACATAGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: ILAMCSCLCSGG*SHMPCSHNIGR Trigger: TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACTACACATGGCCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTGTGCCTGCTTTCCTCTCACCTGCCTTAAATCCATTATTGTCAGCACCCAGCATGCACCCAATTTaGAGACTCACAATTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLVPAFLSPALNPLLSAPSMHPI*RLTISF Trigger: AAAAGAAATTGTGAGTCTCAAAATTGGGTGCATGCT...GGGTGCTGACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR TCA 72 bp | GAAGTCATGGTACTTTGTAAGACATCTAGTAGAGGATaGGTCTCTAAGGCCAATGTGATGAGTGCAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: EVMVLCKTSSRG*VSKANVMSAEF Trigger: GAACTCTGCACTCATCACATTGGCCTTAGAGACTCATCCTCTACTAGATGTCTTACAAAGTACCATGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CAA 90 bp | TATCTACCCAGTAATGTCGCACTCCACTTTTGTAATCTAAGTTACTGTTACCTTGCTCTCAGAACATTCTaGGTCTCATTAACACACGTT | + |
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Preference number: 3 (lower is better) Translates to: YLPSNVALHFCNLSYCYLALRTF*VSLTHV Trigger: AACGTGTGTTAATGAGACCAAGAATGTTCTGAGAGC...AAGGTAACAGTAACTTAGATTACAAAAGTGGAGTGCGACATTACTGGGTAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR-3UTR CAA 90 bp | TATCTACCCAGTAATGTCGCACTCCACTTTTGTAATCTAAGTTACTGTTACCTTGTCAGCACCCATGATTaGAAAAACACAAGTGAATCT | + |
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Preference number: 3 (lower is better) Translates to: YLPSNVALHFCNLSYCYLVSTHD*KNTSES Trigger: AGATTCACTTGTGTTTTTCAAATCATGGGTGCTGAC...AAGGTAACAGTAACTTAGATTACAAAAGTGGAGTGCGACATTACTGGGTAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR TCA 72 bp | CCTGCCTTAAATCCATTATTGTCAGCACCCATGATTTaGAAAACACAAGTGAATCTCTGTTCCTTCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PALNPLLSAPMI*KTQVNLCSFFL Trigger: TAGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR CCA 72 bp | TGCTCTCAGAACATTCTTGGTCTCATTAACACACGTTaGCTCTTGATACAATTTCTTATCTCTGCTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSQNILGLINTR*LLIQFLISAEK Trigger: TTTTTCAGCAGAGATAAGAAATTGTATCAAGAGCCAACGTGTGTTAATGAGACCAAGAATGTTCTGAGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR TCA 90 bp | TCTGACCTCTCTTGTGCCTGCTTTCCTCTCACCTGCCTTAAATCCATTATTGTCGGCAAGCAAGACACCTaGCTCCACAATGGAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SDLSCACFPLTCLKSIIVGKQDT*LHNGKG Trigger: TCCCTTTCCATTGTGGAGTCAGGTGTCTTGCTTGCC...GACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGAGGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR TCA 90 bp | TCTGACCTCTCTTGTGCCTGCTTTCCTCTCACCTGCCTTAAATCCATTATTGTCTGGAAAGGGAGTGAATaGTGTAGGCCTGTAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SDLSCACFPLTCLKSIIVWKGSE*CRPVRS Trigger: GCTTCTTACAGGCCTACATCATTCACTCCCTTTCCA...GACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGAGGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR TCA 90 bp | AGTTGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTATGGGAACGGCAATATaGGAACCAAAAGAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SCLCSGGWSHMPCSHNIGMGTAI*EPKERQ Trigger: CTGCCTCTCTTTTGGTTCTCATATTGCCGTTCCCAT...ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR TCA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGATTCCAAACCTGTGAATaGATGTCAGGCCAATCACAG | + |
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Preference number: 4 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRFQTCE*MSGQSQ Trigger: CTGTGATTGGCCTGACATTCATTCACAGGTTTGGAA...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR CAA 72 bp | TCTATGGCCTATGACAACCCAGCCCACCTGAAGCTTTaGCATGTAATGCTTTGCTCTCAGAACATTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SMAYDNPAHLKL*HVMLCSQNILG Trigger: ACCAAGAATGTTCTGAGAGCAAAGCATTACATGCAAAAGCTTCAGGTGGGCTGGGTTGTCATAGGCCATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR GCA 90 bp | AGTTGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGAGAAGTGTACCATTaGCCAGAAGCACAGAGATAT | + |
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Preference number: 4 (lower is better) Translates to: SCLCSGGWSHMPCSHNIGREVYH*PEAQRY Trigger: ATATCTCTGTGCTTCTGGGCAATGGTACACTTCTCT...ACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CCA 90 bp | TCTGACCTCTCTTGTGCCTGCTTTCCTCTCACCTGCCTTAAATCCATTATTGTCATCGATCATAAGACATaGCAAGCAAGACACCTGACT | + |
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Preference number: 4 (lower is better) Translates to: SDLSCACFPLTCLKSIIVIDHKT*QARHLT Trigger: AGTCAGGTGTCTTGCTTGCCATGTCTTATGATCGAT...GACAATAATGGATTTAAGGCAGGTGAGAGGAAAGCAGGCACAAGAGAGGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CCA 90 bp | GATGGGTTTGGGGGTATAACCTATATAAAGATTAAGTATGTTGGCAATATCTCAAGCTGCTTCCAGTCCTaGGAAGCCAGTCAGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: DGFGGITYIKIKYVGNISSCFQS*EASQQK Trigger: TTTCTGCTGACTGGCTTCCCAGGACTGGAAGCAGCT...TGAGATATTGCCAACATACTTAATCTTTATATAGGTTATACCCCCAAACCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CCA 90 bp | CATGATTTGAAAAACACAAGTGAATCTCTGTTCCTTCTTTCTATGGCCTATGACAAAGAGAGGCAGGATTaGGGGCACAAGAGACAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HDLKNTSESLFLLSMAYDKERQD*GHKRQK Trigger: TTTTTGTCTCTTGTGCCCCCAATCCTGCCTCTCTTT...GTCATAGGCCATAGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR TCA 90 bp | CATGATTTGAAAAACACAAGTGAATCTCTGTTCCTTCTTTCTATGGCCTATGACTGTCTTATCTCTCTATaGTTCACCCATAAAACAGCC | + |
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Preference number: 4 (lower is better) Translates to: HDLKNTSESLFLLSMAYDCLISL*FTHKTA Trigger: GGCTGTTTTATGGGTGAATCATAGAGAGATAAGACA...GTCATAGGCCATAGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR GCA 90 bp | GAACAAGTTTCATGGGGAAACAGGATTAAGCTTTACAAATGGCTATTGAATCATGGTAATGTCAGCACATaGCAGTTTCATGACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: EQVSWGNRIKLYKWLLNHGNVST*QFHDIL Trigger: CAAGATGTCATGAAACTGGCATGTGCTGACATTACC...ATGATTCAATAGCCATTTGTAAAGCTTAATCCTGTTTCCCCATGAAACTTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| 3UTR CAA 72 bp | ACCTGCCTTAAATCCATTATTGTCAGCACCCATGATTaGAAAAACACAAGTGAATCTCTGTTCCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TCLKSIIVSTHD*KNTSESLFLLS Trigger: AGAAAGAAGGAACAGAGATTCACTTGTGTTTTTCAAATCATGGGTGCTGACAATAATGGATTTAAGGCAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CAA 90 bp | TGTCTATGCTCTGGTGGATGGTCCCACATGCCATGTTCACATAACATAGGTAGAATGGGTTCATGGAGGTaGTGGTCATCCTTGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: CLCSGGWSHMPCSHNIGRMGSWR*WSSLMR Trigger: CCTCATCAAGGATGACCACAACCTCCATGAACCCAT...TCTACCTATGTTATGTGAACATGGCATGTGGGACCATCCACCAGAGCATAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CAA 90 bp | TTAAGAGAAGAAGACATTGGGAAGCTGCAAGAGGAACATTTTGAAGGAAGGGCTAACGCTCCTCTGAATTaGCTTGGTCTTGATGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LREEDIGKLQEEHFEGRANAPLN*LGLDAV Trigger: TACAGCATCAAGACCAAGCAAATTCAGAGGAGCGTT...AGCCCTTCCTTCAAAATGTTCCTCTTGCAGCTTCCCAATGTCTTCTTCTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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| CDS-3UTR CAA 90 bp | TATCTACCCAGTAATGTCGCACTCCACTTTTGTAATCTAAGTTACTGTTACCTTAAAAGAGAGGCAGGATaGGGGGCACAAGAGACAAAA | + |
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Preference number: 5 (lower is better) Translates to: YLPSNVALHFCNLSYCYLKREAG*GAQETK Trigger: TTTTGTCTCTTGTGCCCCCAATCCTGCCTCTCTTTT...AAGGTAACAGTAACTTAGATTACAAAAGTGGAGTGCGACATTACTGGGTAGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081748.6 |
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