RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR639 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066263

Ensembl transcript IDs: ENSMUST00000106862.3, ENSMUST00000215653.2

Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGATaGCGCGTGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGC +
Preference number: 1 (lower is better)
Translates to: RAAAAVEYRHLEPRG*RVCYKGHGWRSDPS
Trigger: GCTTGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACACGCGTCATCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp AAGGGGTCACGCAAAGCAGCTGAGGCTCGGCACTGTGAGAGGCCATaGAAGGCCATTGGTGAAGGTGCAGCCTCAGTTTCAATTGAAGGC +
Preference number: 1 (lower is better)
Translates to: KGSRKAAEARHCERP*KAIGEGAASVSIEG
Trigger: GCCTTCAATTGAAACTGAGGCTGCACCTTCACCAATGGCCTTCCATGGCCTCTCACAGTGCCGAGCCTCAGCTGCTTTGCGTGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 90 bp GTCTCTTGTAAGACTATGCCAGGGCCTAGCACACACAGAAGTGGATaGTCACAGTCAGCTATTGAATGGACCACAGGGCCCCCAATGGAG +
Preference number: 1 (lower is better)
Translates to: VSCKTMPGPSTHRSG*SQSAIEWTTGPPME
Trigger: CTCCATTGGGGGCCCTGTGGTCCATTCAATAGCTGACTGTGAGCATCCACTTCTGTGTGTGCTAGGCCCTGGCATAGTCTTACAAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp AGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCCTGCTGCAGTaGGACTTGGTAATATGTAAGGGTCACCCAGGTGGTACTGGTTTT +
Preference number: 1 (lower is better)
Translates to: RGCVPEMAKVVLLLQ*DLVICKGHPGGTGF
Trigger: AAAACCAGTACCACCTGGGTGACCCTTACATATTACCAAGTCCCACTGCAGCAGGAGTACAACCTTGGCCATCTCTGGAACACAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 90 bp GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCTCACAATATGTTCTCACT +
Preference number: 1 (lower is better)
Translates to: EIPSQMDGPGGHHPE*GNPITKELSQYVLT
Trigger: AGTGAGAACATATTGTGAGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp CCAGTCAGAATGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTaGCAAGGATGTGAAGAAAGAGGAATGCTCCTCCATTATTGGTGG +
Preference number: 1 (lower is better)
Translates to: PVRMAKMKNSGDSRC*QGCEERGMLLHYWW
Trigger: CCACCAATAATGGAGGAGCATTCCTCTTTCTTCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTCATCTTAGCCATTCTGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp TGCTCCACTATGTTCATAGCCGCCTTATTTATAATAACCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA +
Preference number: 1 (lower is better)
Translates to: CSTMFIAALFIITRS*KEPRCPSTEEWIQK
Trigger: TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGTTATTATAAATAAGGCGGCTATGAACATAGTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 90 bp TCATTCTACCCTCCTCTTTCATTCCTCCAAACTCTCCTATATACCTaGCTTACTCGCTTTCAAATTCATGGGCTCTTTGAAAATAGCACA +
Preference number: 1 (lower is better)
Translates to: SFYPPLSFLQTLLYT*LTRFQIHGLFENST
Trigger: TGTGCTATTTTCAAAGAGCCCATGAATTTGAAAGCGAGTAAGTCAGGTATATAGGAGAGTTTGGAGGAATGAAAGAGGAGGGTAGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp GAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATaGATCGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: EIKEDLRRWKDLPCS*IGRINIVKMAILPK
Trigger: TTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGCCGATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp ATTCAGTCTATGGACATTCCAGAGTCTTTAAGAACACATAAAAACTaGATGTGGAAAGTATTGCATGGTGGGTTGGATGAAGAATCATTT +
Preference number: 1 (lower is better)
Translates to: IQSMDIPESLRTHKN*MWKVLHGGLDEESF
Trigger: AAATGATTCTTCATCCAACCCACCATGCAATACTTTCCACATCCAGTTTTTATGTGTTCTTAAAGACTCTGGAATGTCCATAGACTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 90 bp TCTATGGACATTCCAGAGTCTTTAAGAACACATAAAAACTGGATGTaGAAAGTATTGCATGGTGGGTTGGATGAAGAATCATTTCATTTT +
Preference number: 1 (lower is better)
Translates to: SMDIPESLRTHKNWM*KVLHGGLDEESFHF
Trigger: AAAATGAAATGATTCTTCATCCAACCCACCATGCAATACTTTCCACATCCAGTTTTTATGTGTTCTTAAAGACTCTGGAATGTCCATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAGAGATTGGGGAGGCCCGTTGGACTTaGAAACTTTATATGCCCCAG +
Preference number: 2 (lower is better)
Translates to: SARQKTPSIRQKDHQEIGEARWT*KLYMPQ
Trigger: CTGGGGCATATAAAGTTTGCAAGTCCAACGGGCCTC...CCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp CATCTAGTGATTGCCATATCCAGAGATCCATCCCATGATCTGCTTCCAAACGCTTCTCTTGTAAGACTATaGCAGGGCCTAGCACACACA +
Preference number: 2 (lower is better)
Translates to: HLVIAISRDPSHDLLPNASLVRL*QGLAHT
Trigger: TGTGTGTGCTAGGCCCTGGCATAGTCTTACAAGAGA...AGCGTTTGGAAGCAGATCATGGGATGGATCTCTGGATATGGCAATCACTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTTCAGGTGACAGCAGATaGTGGCAAGGATGTGAAGAA +
Preference number: 2 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTSGDSR*WQGCEE
Trigger: TTCTTCACATCCTTGCCAGCATCTGCTGTCACCTGA...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTACAGAATATGATGCCTaGGCAGCTGAGGCTCTTCAT +
Preference number: 2 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTTEYDA*AAEALH
Trigger: ATGAAGAGCCTCAGCTGCGCAGGCATCATATTCTGT...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 90 bp GTGAAGAAAGAGGAATGCTCCTCCATTATTGGTGGGATTGCAAGCTaGTACAACCACTCTGAAAATCAGTCTGGCGGTTCCTCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VKKEECSSIIGGIAS*YNHSENQSGGSSEN
Trigger: ATTTTCTGAGGAACCGCCAGACTGATTTTCAGAGTGGTTGTACAAGCTTGCAATCCCACCAATAATGGAGGAGCATTCCTCTTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAGAGATTGGGTGGCAGAGAAGCACCTaGACAAATGTTCAACATCCT +
Preference number: 2 (lower is better)
Translates to: SARQKTPSIRQKDHQEIGWQRST*TNVQHP
Trigger: AGGATGTTGAACATTTGTTCAGGTGCTTCTCTGCCA...CCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 90 bp CTATATGTGGAACAACAATATGAACTAAGCAGTATCCCGGAGCTCTaGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT +
Preference number: 2 (lower is better)
Translates to: LYVEQQYELSSIPEL*SLAAYVSKDGLVGH
Trigger: ATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGATACTGCTTAGTTCATATTGTTGTTCCACATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp TTAACATATCTGATTAAAGAAGAAATGTTGGACAGAAGGTACTCTACCCAACTCCTAGTCGGCCATCACTaGAAAGAGAGGCCCGTTGGA +
Preference number: 2 (lower is better)
Translates to: LTYLIKEEMLDRRYSTQLLVGHH*KERPVG
Trigger: TCCAACGGGCCTCTCTTTGCAGTGATGGCCGACTAG...GAGTTGGGTAGAGTACCTTCTGTCCAACATTTCTTCTTTAATCAGATATGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CCA 90 bp ATAGCTAAACCACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCGGTGACAGCAGATGCTaGCAAGGATGTGAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: IAKPQKDPTKIENFRPISGDSRC*QGCEER
Trigger: TCTTTCTTCACATCCTTGCCAGCATCTGCTGTCACC...GGATATTGGTCTGAAGTTCTCTATCTTTGTGGGGTCTTTTTGTGGTTTAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 90 bp ATCCATCCTGACCAAGTAGGTTTCATCCCAGGGATGCAGGGATGGTaGAAAATACGGAAATCCATCAACGTAATCCAGTATATAAACAAA +
Preference number: 2 (lower is better)
Translates to: IHPDQVGFIPGMQGW*KIRKSINVIQYINK
Trigger: TTTGTTTATATACTGGATTACGTTGATGGATTTCCGTATTTTCAACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp ATGCCCGACCTAAAGCTGTACTACAGAGCAATTGTGATTAAAACTGCATGGTACTCAGAATGGCTAAGATaGAAAATTCAGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: MPDLKLYYRAIVIKTAWYSEWLR*KIQVTA
Trigger: TGCTGTCACCTGAATTTTTCATCTTAGCCATTCTGA...GTACCATGCAGTTTTAATCACAATTGCTCTGTAGTACAGCTTTAGGTCGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp ATAGCTAAACCACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCCATCAAAGCAAATGGTaGGAAGCTGTAAGCAATCCC +
Preference number: 2 (lower is better)
Translates to: IAKPQKDPTKIENFRPISHQSKW*EAVSNP
Trigger: GGGATTGCTTACAGCTTCTCACCATTTGCTTTGATG...GGATATTGGTCTGAAGTTCTCTATCTTTGTGGGGTCTTTTTGTGGTTTAGCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp GAAGATATGGGTATAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTTTAAACTCAAGAGAATaGAGACCAAAGTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: EDMGIGEKFLNRTAMACALNSRE*RPKCGH
Trigger: GTGTCCACACTTTGGTCTTCATTCTCTTGAGTTTAA...AGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTATACCCATATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CCA 90 bp TTAACATATCTGATTAAAGAAGAAATGTTGGACAGAAGGTACTCTACCCAACTCCAGCAATCCCTCTTCTaGGCATATATCCAGAAGATG +
Preference number: 2 (lower is better)
Translates to: LTYLIKEEMLDRRYSTQLQQSLF*AYIQKM
Trigger: CATCTTCTGGATATATGCCCAGAAGAGGGATTGCTG...GAGTTGGGTAGAGTACCTTCTGTCCAACATTTCTTCTTTAATCAGATATGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR GCA 90 bp GAAGATATGGGTATAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTACACTAGCAAGATTTTaGTTAAAGGACCCAGATATA +
Preference number: 2 (lower is better)
Translates to: EDMGIGEKFLNRTAMACATLARF*LKDPDI
Trigger: TATATCTGGGTCCTTTAAGCAAAATCTTGCTAGTGT...AGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTATACCCATATCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp TATTTTCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCTCACAGTTAAGAAAGAGACTGTAAGGCTCAGTTaGAATCATTCAGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: YFLLKEETVLVELTVKKETVRLS*NHSVYG
Trigger: TCCATAGACTGAATGATTTCAACTGAGCCTTACAGT...CTCTTTCTTAACTGTGAGCTCCACTAAAACAGTTTCTTCCTTCAAGAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR TCA 90 bp TATTTTCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCTCACAGTTAAGAAAGAGAGTGAAAGATCTGTATaGCAAGATCTTCATGTCTCT +
Preference number: 2 (lower is better)
Translates to: YFLLKEETVLVELTVKKESERSV*QDLHVS
Trigger: AGAGACATGAAGATCTTGTCATACAGATCTTTCACT...CTCTTTCTTAACTGTGAGCTCCACTAAAACAGTTTCTTCCTTCAAGAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CCA 90 bp TATTTTCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCTCACAGTTAAGAAAGAGACCATGAATATCTGGTaGCAAACAGAAAAGTACACT +
Preference number: 2 (lower is better)
Translates to: YFLLKEETVLVELTVKKETMNIW*QTEKYT
Trigger: AGTGTACTTTTCTGTTTGCCACCAGATATTCATGGT...CTCTTTCTTAACTGTGAGCTCCACTAAAACAGTTTCTTCCTTCAAGAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 72 bp GCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGATaGCGCGTGTGCTACAAAGGGCATGGCTGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: AAVEYRHLEPRG*RVCYKGHGWRS
Trigger: ACTTCTCCAGCCATGCCCTTTGTAGCACACGCGTCATCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp AAGACTATGCCAGGGCCTAGCACACACAGAAGTGGATaGTCACAGTCAGCTATTGAATGGACCACAGGGCCC +
Preference number: 3 (lower is better)
Translates to: KTMPGPSTHRSG*SQSAIEWTTGP
Trigger: GGGCCCTGTGGTCCATTCAATAGCTGACTGTGAGCATCCACTTCTGTGTGTGCTAGGCCCTGGCATAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp TACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTaGAGGAGCCCAGAAGATAGTGAGTTGGATCCCAGA +
Preference number: 3 (lower is better)
Translates to: YKGHGWRSDPSP*RSPEDSELDPR
Trigger: TCTGGGATCCAACTCACTATCTTCTGGGCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCCATGCCCTTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp TGCAAAGAGAGGCCCGTTGGACTTGCAAACTTTATATaGCCCAGTACAGGGGAACACCAGGGCCAAAAAGGG +
Preference number: 3 (lower is better)
Translates to: CKERPVGLANFI*PSTGEHQGQKG
Trigger: CCCTTTTTGGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAACGGGCCTCTCTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp AGTCGGCCATCACTGCAAAGAGAGGCCCGTTGGACTTaGAAACTTTATATGCCCCAGTACAGGGGAACACCA +
Preference number: 3 (lower is better)
Translates to: SRPSLQREARWT*KLYMPQYRGTP
Trigger: TGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAACGGGCCTCTCTTTGCAGTGATGGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp GTTCCAGAGATGGCCAAGGTTGTACTCCTGCTGCAGTaGGACTTGGTAATATGTAAGGGTCACCCAGGTGGT +
Preference number: 3 (lower is better)
Translates to: VPEMAKVVLLLQ*DLVICKGHPGG
Trigger: ACCACCTGGGTGACCCTTACATATTACCAAGTCCCACTGCAGCAGGAGTACAACCTTGGCCATCTCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp GGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCGT +
Preference number: 3 (lower is better)
Translates to: GALVSSCICIKR*PSRPSLQREAR
Trigger: ACGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp ACCCAAGCCCTTGGAGGAGCCCAGAAGATAGTGAGTTaGATCCCAGACATTGGACGGTTGGAGATTGACTTT +
Preference number: 3 (lower is better)
Translates to: TQALGGAQKIVS*IPDIGRLEIDF
Trigger: AAAGTCAATCTCCAACCGTCCAATGTCTGGGATCCAACTCACTATCTTCTGGGCTCCTCCAAGGGCTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp ACACACAGAAGTGGATGCTCACAGTCAGCTATTGAATaGACCACAGGGCCCCCAATGGAGGAACTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: THRSGCSQSAIE*TTGPPMEELEK
Trigger: TTTCTCTAGTTCCTCCATTGGGGGCCCTGTGGTCCATTCAATAGCTGACTGTGAGCATCCACTTCTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 72 bp AGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCTCACAATAT +
Preference number: 3 (lower is better)
Translates to: SQMDGPGGHHPE*GNPITKELSQY
Trigger: ATATTGTGAGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CAA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTGGTGGGATTGCAAGCTaGTACAACCACTCTGAAAAT +
Preference number: 3 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTGGIAS*YNHSEN
Trigger: ATTTTCAGAGTGGTTGTACAAGCTTGCAATCCCACC...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp GCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTaGAAAGAGAGGCCCGTTGGACTTGCAAACTTTATA +
Preference number: 3 (lower is better)
Translates to: AYVSKDGLVGHH*KERPVGLANFI
Trigger: TATAAAGTTTGCAAGTCCAACGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp ATGTTCATAGCCGCCTTATTTATAATAACCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: MFIAALFIITRS*KEPRCPSTEEW
Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGTTATTATAAATAAGGCGGCTATGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp GACACCGTCAATAAGACAAAAAGACCACCAAGAGATTaGGAAAGGATCTTTACCTATCCCAAATCGGACAGG +
Preference number: 3 (lower is better)
Translates to: DTVNKTKRPPRD*ERIFTYPKSDR
Trigger: CCTGTCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CAA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTTACTGTAAGGCTCAGTaGAAATCATTCAGTCTATGG +
Preference number: 3 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTYCKAQ*KSFSLW
Trigger: CCATAGACTGAATGATTTCAACTGAGCCTTACAGTA...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CAA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTAAATTCATGGGCTCTTaGAAAATAGCACAGGATAGC +
Preference number: 3 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTKFMGS*KIAQDS
Trigger: GCTATCCTGTGCTATTTTCAAAGAGCCCATGAATTT...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp GGTGCTGGCACAACTGGCTGTTATCATGTAGAAGATTaGGAATTGATCCATTACTATCTCCTTGTACTAAGG +
Preference number: 3 (lower is better)
Translates to: GAGTTGCYHVED*ELIHYYLLVLR
Trigger: CCTTAGTACAAGGAGATAGTAATGGATCAATTCGCAATCTTCTACATGATAACAGCCAGTTGTGCCAGCACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CAA 90 bp ATGCCCGACCTAAAGCTGTACTACAGAGCAATTGTGATTAAAACTGCATGGTACCACACCTATGGTCACTaGATTTTTGACAAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: MPDLKLYYRAIVIKTAWYHTYGH*IFDKEA
Trigger: AGCTTCCTTGTCAAAAATCAAGTGACCATAGGTGTG...GTACCATGCAGTTTTAATCACAATTGCTCTGTAGTACAGCTTTAGGTCGGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 72 bp CCTCCTCTTTCATTCCTCCAAACTCTCCTATATACCTaGCTTACTCGCTTTCAAATTCATGGGCTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: PPLSFLQTLLYT*LTRFQIHGLFE
Trigger: TTCAAAGAGCCCATGAATTTGAAAGCGAGTAAGTCAGGTATATAGGAGAGTTTGGAGGAATGAAAGAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp GAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATaGATCGGCAGGATCAATATAGTAAAAATGGCTATC +
Preference number: 3 (lower is better)
Translates to: EDLRRWKDLPCS*IGRINIVKMAI
Trigger: GATAGCCATTTTTACTATATTGATCCTGCCGATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp CAAACGCTGACACTATTGCATACACTAGCAAGATTTTaGTTAAAGGACCCAGATATAGCTGTCTCTTGTAAG +
Preference number: 3 (lower is better)
Translates to: QTLTLLHTLARF*LKDPDIAVSCK
Trigger: CTTACAAGAGACAGCTATATCTGGGTCCTTTAAGCAAAATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp TTATTTATAATAACCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGGAATGGATACAGAAAATGTGG +
Preference number: 3 (lower is better)
Translates to: LFIITRSWKEPR*PSTEEWIQKMW
Trigger: CCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGTTATTATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp TTTATTAAACCACGGGCAGAAAGAATAAGAAACAATTaGACCTGTGTTGATGGAGTTGAGAGAAGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: FIKPRAERIRNN*TCVDGVERRCQ
Trigger: CTGACACCTTCTCTCAACTCCATCAACACAGGTCCAATTGTTTCTTATTCTTTCTGCCCGTGGTTTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp CCATTACTATCTCCTTGTACTAAGGTCAAATCTAAGTaGATTAAGGAACTCCACATAAAACCAGAGACACTG +
Preference number: 3 (lower is better)
Translates to: PLLSPCTKVKSK*IKELHIKPETL
Trigger: CAGTGTCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAGATAGTAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR-3UTR CAA 90 bp ATAGCTAAACCACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCTCAAGGGGATACAAATaGGAAAAGAGGAAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: IAKPQKDPTKIENFRPISSRGYK*EKRKSK
Trigger: TTTTGACTTCCTCTTTTCCAATTTGTATCCCCTTGA...GGATATTGGTCTGAAGTTCTCTATCTTTGTGGGGTCTTTTTGTGGTTTAGCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR TCA 72 bp AAACTGGATGTGGAAAGTATTGCATGGTGGGTTGGATaGAGAATCATTTCATTTTGTACAAAGTGTCCTCAT +
Preference number: 3 (lower is better)
Translates to: KLDVESIAWWVG*RIISFCTKCPH
Trigger: ATGAGGACACTTTGTACAAAATGAAATGATTCTTCATCCAACCCACCATGCAATACTTTCCACATCCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR GCA 72 bp ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATaGTCATGGATCGGCAGGATCAATATAGTAAAAATG +
Preference number: 3 (lower is better)
Translates to: IKEDLRRWKDLP*SWIGRINIVKM
Trigger: CATTTTTACTATATTGATCCTGCCGATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CCA 72 bp ATAAAAACTGGATGTGGAAAGTATTGCATGGTGGGTTaGATGAAGAATCATTTCATTTTGTACAAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: IKTGCGKYCMVG*MKNHFILYKVS
Trigger: GGACACTTTGTACAAAATGAAATGATTCTTCATCCAACCCACCATGCAATACTTTCCACATCCAGTTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 72 bp GAGATGGCCAAGGTTGTACTCCTGCTGCAGTGGGACTaGGTAATATGTAAGGGTCACCCAGGTGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: EMAKVVLLLQWD*VICKGHPGGTG
Trigger: ACCAGTACCACCTGGGTGACCCTTACATATTACCAAGTCCCACTGCAGCAGGAGTACAACCTTGGCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR TCA 90 bp CATCTAGTGATTGCCATATCCAGAGATCCATCCCATGATCTGCTTCCAAACGCTAGACTCCCACCTCGGTaGTGGCCAGCATGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HLVIAISRDPSHDLLPNARLPPR*WPAWRG
Trigger: TCCTCTCCATGCTGGCCATCACCGAGGTGGGAGTCT...AGCGTTTGGAAGCAGATCATGGGATGGATCTCTGGATATGGCAATCACTAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CCA 90 bp GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACAGTCCAGCCCAAAAGTaGCCAGGACAATGGCCAACC +
Preference number: 4 (lower is better)
Translates to: EPRCPSTEEWIQKMWYIYSPAQK*PGQWPT
Trigger: GGTTGGCCATTGTCCTGGCCACTTTTGGGCTGGACT...GTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CCA 90 bp GTGTTTTCTGAAAGCACAAAGAGGCTGTGTTCCAGAGATGGCCAAGGTTGTACTCTGGTGATGCATGCTTaGCAACACGATGCATCACAG +
Preference number: 4 (lower is better)
Translates to: VFSESTKRLCSRDGQGCTLVMHA*QHDASQ
Trigger: CTGTGATGCATCGTGTTGCCAAGCATGCATCACCAG...AGTACAACCTTGGCCATCTCTGGAACACAGCCTCTTTGTGCTTTCAGAAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CCA 90 bp TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAGAGATTGGGAGGTACATTGGCTCATaGAGAGCTGACTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SARQKTPSIRQKDHQEIGRYIGS*RADSCC
Trigger: GCAGCAAGAGTCAGCTCTCCATGAGCCAATGTACCT...CCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR TCA 90 bp CAGTATCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCATAAGAGACCACAATaGGTAATGAGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QYPGALVSSCICIKRWPSHKRPQ*VMSPAQ
Trigger: TTGGGCTGGACTCATTACTCATTGTGGTCTCTTATG...ACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR GCA 90 bp CAGTATCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCCTCCAGTCCTGGAATaGCAGTTAGGAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: QYPGALVSSCICIKRWPSPPVLE*QLGRLI
Trigger: TATCAATCTTCCTAACTGGCATTCCAGGACTGGAGG...ACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR GCA 90 bp TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAGAGATTGGGTGCTTGGCAACACGATaGATCACAGACACACCAATC +
Preference number: 4 (lower is better)
Translates to: SARQKTPSIRQKDHQEIGCLATR*ITDTPI
Trigger: GATTGGTGTGTCTGTGATGCATCGTGTTGCCAAGCA...CCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR TCA 90 bp CATCTAGTGATTGCCATATCCAGAGATCCATCCCATGATCTGCTTCCAAACGCTATGCCAGAGAAAGTGTaGATGAAGAACATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HLVIAISRDPSHDLLPNAMPEKV*MKNICA
Trigger: GGCACAAATGTTCTTCATTCACACTTTCTCTGGCAT...AGCGTTTGGAAGCAGATCATGGGATGGATCTCTGGATATGGCAATCACTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 72 bp GACCAAGTAGGTTTCATCCCAGGGATGCAGGGATGGTaGAAAATACGGAAATCCATCAACGTAATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DQVGFIPGMQGW*KIRKSINVIQY
Trigger: ATACTGGATTACGTTGATGGATTTCCGTATTTTCAACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 72 bp TGGTGCTGGCACAACTGGCTGTTATCATGTAGAAGATaGCGAATTGATCCATTACTATCTCCTTGTACTAAG +
Preference number: 4 (lower is better)
Translates to: WCWHNWLLSCRR*RIDPLLSPCTK
Trigger: CTTAGTACAAGGAGATAGTAATGGATCAATTCGCAATCTTCTACATGATAACAGCCAGTTGTGCCAGCACCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR TCA 90 bp TTAACATATCTGATTAAAGAAGAAATGTTGGACAGAAGGTACTCTACCCAACTCTTGGAAGTGGGGCCATaGGTGCAACACTCTTTAGTG +
Preference number: 4 (lower is better)
Translates to: LTYLIKEEMLDRRYSTQLLEVGP*VQHSLV
Trigger: CACTAAAGAGTGTTGCACTCATGGCCCCACTTCCAA...GAGTTGGGTAGAGTACCTTCTGTCCAACATTTCTTCTTTAATCAGATATGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR TCA 90 bp GAAGATATGGGTATAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTTCACTGTGTAAAGAATaGGCCCATAAGAGACCACAA +
Preference number: 4 (lower is better)
Translates to: EDMGIGEKFLNRTAMACASLCKE*AHKRPQ
Trigger: TTGTGGTCTCTTATGGGCTCATTCTTTACACAGTGA...AGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTATACCCATATCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR GCA 90 bp CAAACGCTGACACTATTGCATACACTAGCAAGATTTTGCTTAAAGGACCCAGATAGAGCTGACTCTTGCTaGACTGCTATCATAATTAGG +
Preference number: 4 (lower is better)
Translates to: QTLTLLHTLARFCLKDPDRADSC*TAIIIR
Trigger: CCTAATTATGATAGCAGTGCAGCAAGAGTCAGCTCT...ATCTGGGTCCTTTAAGCAAAATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CCA 90 bp TTAACATATCTGATTAAAGAAGAAATGTTGGACAGAAGGTACTCTACCCAACTCGAGGCAGAGTTAGAATaGCTGTATAGCGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LTYLIKEEMLDRRYSTQLEAELE*LYSAED
Trigger: ATCCTCTGCGCTATACAGCCATTCTAACTCTGCCTC...GAGTTGGGTAGAGTACCTTCTGTCCAACATTTCTTCTTTAATCAGATATGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
3UTR CAA 72 bp CAGCTGAGGCTCTTCATATTTTACTGTAAGGCTCAGTaGAAATCATTCAGTCTATGGACATTCCAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLRLFIFYCKAQ*KSFSLWTFQSL
Trigger: AAGACTCTGGAATGTCCATAGACTGAATGATTTCAACTGAGCCTTACAGTAAAATATGAAGAGCCTCAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR GCA 90 bp TATTTTCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCTCACAGTTAAGAAAGAGAATGAAGAACATTTGTaGCAAACAGCCATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: YFLLKEETVLVELTVKKENEEHL*QTAIKV
Trigger: GACTTTGATGGCTGTTTGGCACAAATGTTCTTCATT...CTCTTTCTTAACTGTGAGCTCCACTAAAACAGTTTCTTCCTTCAAGAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CAA 90 bp CATCTAGTGATTGCCATATCCAGAGATCCATCCCATGATCTGCTTCCAAACGCTTGTGACACACATGTGTaGAGGGTCTTCTTCCGACCC +
Preference number: 5 (lower is better)
Translates to: HLVIAISRDPSHDLLPNACDTHV*RVFFRP
Trigger: GGGTCGGAAGAAGACCCTCAACACATGTGTGTCACA...AGCGTTTGGAAGCAGATCATGGGATGGATCTCTGGATATGGCAATCACTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CAA 90 bp CAAACGCTGACACTATTGCATACACTAGCAAGATTTTGCTTAAAGGACCCAGATACTGGTGATGCATGCTaGGCAACACGATGCATCACA +
Preference number: 5 (lower is better)
Translates to: QTLTLLHTLARFCLKDPDTGDAC*ATRCIT
Trigger: TGTGATGCATCGTGTTGCCAAGCATGCATCACCAGT...ATCTGGGTCCTTTAAGCAAAATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CAA 90 bp TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAGAGATTGGGTGCCAGTTAGGAAGATaGATAGGAGGTCAAGACTTT +
Preference number: 5 (lower is better)
Translates to: SARQKTPSIRQKDHQEIGCQLGR*IGGQDF
Trigger: AAAGTCTTGACCTCCTATCAATCTTCCTAACTGGCA...CCCAATCTCTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS-3UTR CAA 90 bp ATAGCTAAACCACAAAAAGACCCCACAAAGATAGAGAACTTCAGACCAATATCCATCATAATTAGGCTGTaGCCCACAATGGCAACAATG +
Preference number: 5 (lower is better)
Translates to: IAKPQKDPTKIENFRPISIIIRL*PTMATM
Trigger: CATTGTTGCCATTGTGGGCAACAGCCTAATTATGAT...GGATATTGGTCTGAAGTTCTCTATCTTTGTGGGGTCTTTTTGTGGTTTAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215653.2
CDS TCA 72 bp CAGATAGATGCTCGACATAAGTGTGTGGACCACTGGTaGTGCATGCTTGGCAACACGATGCATCACAGACAC +
Preference number: 6 (lower is better)
Translates to: QIDARHKCVDHW*CMLGNTMHHRH
Trigger: GTGTCTGTGATGCATCGTGTTGCCAAGCATGCATCACCAGTGGTCCACACACTTATGTCGAGCATCTATCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS GCA 72 bp ATGCTCGACATAAGTGTGTGGACCACTGGTGATGCATaGTTGGCAACACGATGCATCACAGACACACCAATC +
Preference number: 6 (lower is better)
Translates to: MLDISVWTTGDA*LATRCITDTPI
Trigger: GATTGGTGTGTCTGTGATGCATCGTGTTGCCAAGCATGCATCACCAGTGGTCCACACACTTATGTCGAGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS CAA 72 bp CTCGACATAAGTGTGTGGACCACTGGTGATGCATGCTaGGCAACACGATGCATCACAGACACACCAATCATA +
Preference number: 6 (lower is better)
Translates to: LDISVWTTGDAC*ATRCITDTPII
Trigger: TATGATTGGTGTGTCTGTGATGCATCGTGTTGCCAAGCATGCATCACCAGTGGTCCACACACTTATGTCGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS CCA 72 bp CCCTTCTTGCACGAGAACAAGTTGGCAATTCCCTGTTaGATTGGACGGGTTTTCACACTGTATATGATAGGA +
Preference number: 6 (lower is better)
Translates to: PFLHENKLAIPC*IGRVFTLYMIG
Trigger: TCCTATCATATACAGTGTGAAAACCCGTCCAATCCAACAGGGAATTGCCAACTTGTTCTCGTGCAAGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS CAA 72 bp TCCCTTCTTGCACGAGAACAAGTTGGCAATTCCCTGTaGGATTGGACGGGTTTTCACACTGTATATGATAGG +
Preference number: 6 (lower is better)
Translates to: SLLAREQVGNSL*DWTGFHTVYDR
Trigger: CCTATCATATACAGTGTGAAAACCCGTCCAATCCAACAGGGAATTGCCAACTTGTTCTCGTGCAAGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS CAA 90 bp TCAGATAGATCCCTTCTTGCACGAGAACAAGTTGGCAATTCCCTGTaGGATTGGACGGGTTTTCACACTGTATATGATAGGATTGAGCAC +
Preference number: 6 (lower is better)
Translates to: SDRSLLAREQVGNSL*DWTGFHTVYDRIEH
Trigger: GTGCTCAATCCTATCATATACAGTGTGAAAACCCGTCCAATCCAACAGGGAATTGCCAACTTGTTCTCGTGCAAGAAGGGATCTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2
CDS CCA 72 bp CTTGCACGAGAACAAGTTGGCAATTCCCTGTTGGATTaGACGGGTTTTCACACTGTATATGATAGGATTGAG +
Preference number: 6 (lower is better)
Translates to: LAREQVGNSLLD*TGFHTVYDRIE
Trigger: CTCAATCCTATCATATACAGTGTGAAAACCCGTCCAATCCAACAGGGAATTGCCAACTTGTTCTCGTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106862.3
ENSMUST00000215653.2