Pregenerated sensors for OLFR638 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094063Ensembl transcript IDs: ENSMUST00000209757.3, ENSMUST00000218325.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCAGCGCAGACCAGGTaGATCATATCCTGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLHILVIHNFMAVIFMLESAQTR*IISWWR Trigger: CCTCCACCAGGATATGATTCACCTGGTCTGCGCTGA...CTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTAGGTACATGGGCTCGTaGAGAGATGGCTCTGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CSTPHPCYTQFYGSNIHARYMGS*RDGSVR Trigger: CCGCACAGAGCCATCTCTCCACGAGCCCATGTACCT...AGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR TCA 90 bp | GCAAATGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGGCTCTGTGCGGATaGCAGTTAGGATGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ANVPLHILVIHNFMAVIFMALCG*QLGWWC Trigger: ACACCACCATCCTAACTGTCATCCGCACAGAGCCAT...GAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTTGAACCAGAGGACCTaGATGACTGTAGGGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CSTPHPCYTQFYGSNIHALNQRT*MTVGSV Trigger: CACACTCCCTACAGTCATGCAGGTCCTCTGGTTCAA...AGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR TCA 90 bp | TGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTGATAGATATTGGCCATaGGAACATGGACCAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CSTPHPCYTQFYGSNIHADRYWP*EHGPVE Trigger: CTCCACTGGTCCATGTTCTCATGGCCAATATCTATC...AGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR TCA 90 bp | CTATTAAGCAAATGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAGGCGAGTAATTCCTTaGCGGATCTGCTTGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LLSKCSTPHPCYTQFYGSRRVIP*RICLVF Trigger: AAAGACCAAGCAGATCCGTCAAGGAATTACTCGCCT...ACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACATTTGCTTAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTGAGGAAGAATACCTGTaGAAAGCAGGCCTCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: CSTPHPCYTQFYGSNIHAEEEYL*KAGLKA Trigger: AGCTTTGAGGCCTGCTTTGCACAGGTATTCTTCCTC...AGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CCA 90 bp | CACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCCATGGTCGTTCAGTCCAAGTaGCTGTGTTCAGGACACTTT | + |
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Preference number: 4 (lower is better) Translates to: HILVIHNFMAVIFMLESMVVQSK*LCSGHF Trigger: AAAGTGTCCTGAACACAGCCACTTGGACTGAACGAC...CATGGACTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTGAGAACATGGACCAGTaGAGAAGCATGCTTCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CSTPHPCYTQFYGSNIHAENMDQ*RSMLRK Trigger: TTTGCGAAGCATGCTTCTCCACTGGTCCATGTTCTC...AGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR TCA 90 bp | GCAAATGTTCCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCGAACAGATGATTCCATaGATGAGAACCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ANVPLHILVIHNFMAVIFEQMIP*MRTHGG Trigger: TCCTCCATGGGTTCTCATTCATGGAATCATCTGTTC...GAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGGAACATTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CCA 90 bp | CACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCCATGATGAATGAGAACCCATaGAGGAAGAATACCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HILVIHNFMAVIFMLESMMNENP*RKNTCA Trigger: TGCACAGGTATTCTTCCTCCATGGGTTCTCATTCAT...CATGGACTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR GCA 90 bp | CCACTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGACTTTTCAGGATAAGTaGATAGGAGAGTACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: PLHILVIHNFMAVIFMLETFQDK*IGEYNE Trigger: CTCATTGTACTCTCCTATGCACTTATCCTGAAAAGT...CTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS TCA 90 bp | GGACATAGAGAACCAGAACAGCTAGCATGTGGGACAGACAGTTGTTaGGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTGTTCAGGACAC | + |
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Preference number: 5 (lower is better) Translates to: GHREPEQLACGTDSC*EPGVVQSKWLCSGH Trigger: GTGTCCTGAACACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTAGCTGTTCTGGTTCTCTATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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| CDS GCA 90 bp | TCGTTCAGTCCAAGTGGCTGTGTTCAGGACACTTTTCAGGATAAGTaGATAGGAGAGTACAATGAGCAGAGGGTCCAATACAATAATGAG | + |
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Preference number: 5 (lower is better) Translates to: SFSPSGCVQDTFQDK*IGEYNEQRVQYNNE Trigger: CTCATTATTGTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAAAGTGTCCTGAACACAGCCACTTGGACTGAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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| CDS-3UTR CAA 90 bp | CACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCCATGATGTGGGACAGACAGTaGTTGAGAGCCCGGAGTCGT | + |
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Preference number: 5 (lower is better) Translates to: HILVIHNFMAVIFMLESMMWDRQ*LRARSR Trigger: ACGACTCCGGGCTCTCAACAACTGTCTGTCCCACAT...CATGGACTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CAA 90 bp | CTCCACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCCAATCCGTACCATCTGTaGACTCTGATGTCAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: LHILVIHNFMAVIFMLESNPYHL*TLMSAQ Trigger: CTGCGCTGACATCAGAGTCAACAGATGGTACGGATT...GGACTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS-3UTR CAA 90 bp | CACATCCTTGTTATACACAATTTTATGGCAGTAATATTCATGCTTGAGTCCATGGAGGCGAGTAATTCCTaGACGGATCTGCTTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HILVIHNFMAVIFMLESMEASNS*TDLLGL Trigger: AAGACCAAGCAGATCCGTCAAGGAATTACTCGCCTC...CATGGACTCAAGCATGAATATTACTGCCATAAAATTGTGTATAACAAGGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218325.2 |
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| CDS TCA 72 bp | GAACCAGAACAGCTAGCATGTGGGACAGACAGTTGTTaGGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: EPEQLACGTDSC*EPGVVQSKWLC Trigger: ACACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTAGCTGTTCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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| CDS CAA 72 bp | AGAACCAGAACAGCTAGCATGTGGGACAGACAGTTGTaGAGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTRTASMWDRQL*RARSRSVQVAV Trigger: CACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTAGCTGTTCTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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| CDS GCA 72 bp | TCAAAGCTGATTTCCCGAATGTTGAACCAGAGGACCTaGATGACTGTAGGGAGTGTGGTGAGAGTTAGACCC | + |
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Preference number: 6 (lower is better) Translates to: SKLISRMLNQRT*MTVGSVVRVRP Trigger: GGGTCTAACTCTCACCACACTCCCTACAGTCATGCAGGTCCTCTGGTTCAACATTCGGGAAATCAGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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| CDS GCA 72 bp | CCAAGTGGCTGTGTTCAGGACACTTTTCAGGATAAGTaGATAGGAGAGTACAATGAGCAGAGGGTCCAATAC | + |
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Preference number: 6 (lower is better) Translates to: PSGCVQDTFQDK*IGEYNEQRVQY Trigger: GTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAAAGTGTCCTGAACACAGCCACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209757.3 ENSMUST00000218325.2 |
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