Pregenerated sensors for OLFR635 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094520Ensembl transcript IDs: ENSMUST00000098185.2, ENSMUST00000209473.4
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCACCTTCCCAGCCAGAGGAGAGGTGGCCGCCTGGGAAGGCTTTaGCCGCCAGAGCATGTGAATGAGCCATCTTGTATCCCATGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RHLPSQRRGGRLGRL*PPEHVNEPSCIPCP Trigger: GGGACATGGGATACAAGATGGCTCATTCACATGCTCTGGCGGTCAAAGCCTTCCCAGGCGGCCACCTCTCCTCTGGCTGGGAAGGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR GCA 90 bp | TGTCATCAATTGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGGAAACCCAGGGCAAAGAAGCAGGAATGAGT | + |
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Preference number: 1 (lower is better) Translates to: CHQLEERPLGIANFI*PSTGETQGKEAGMS Trigger: ACTCATTCCTGCTTCTTTGCCCTGGGTTTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCAATTGATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTaGTGGCTGACTAGGCCATCTTTTGATACATATACAGCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGHIKFACPMGLSFQ*WLTRPSFDTYTARV Trigger: GACTCTAGCTGTATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTATATGCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CCA 90 bp | ATTACACCAGACTTCTCACCAGAGACTATGAAAGCCAGAAGATCCTaGACAGATGTTACACAGACCCTAAGAGAACACAAATGCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: ITPDFSPETMKARRS*TDVTQTLREHKCQL Trigger: GAGCTGGCATTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTCTGGTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR TCA 90 bp | CCTGTAAACGTTAATACTAGAAAGCTTGAGACAGGAACAAGAAAGTaGCATCAGTGTTCTTCTGTTACTGCCAAGAGCATTGCTGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: PVNVNTRKLETGTRK*HQCSSVTAKSIAEW Trigger: CCACTCAGCAATGCTCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTTGTTCCTGTCTCAAGCTTTCTAGTATTAACGTTTACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR TCA 90 bp | AAGAAAGTGACATCAGTGTTCTTCTGTTACTGCCAAGAGCATTGCTaGGTGGATACTTCTGGGAAGAAATCACAGTTTACAAGAAATCAG | + |
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Preference number: 1 (lower is better) Translates to: KKVTSVFFCYCQEHC*VDTSGKKSQFTRNQ Trigger: CTGATTTCTTGTAAACTGTGATTTCTTCCCAGAAGTATCCACTCAGCAATGCTCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR TCA 90 bp | AGGATATACCTTCTTCTCAGTGCCACATGGTACTTCCTCAAAAATTaGCCATATAAATGGTCACAAATTAGGCCTCCACAGATACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: RIYLLLSATWYFLKN*PYKWSQIRPPQIQN Trigger: ATTTTGTATCTGTGGAGGCCTAATTTGTGACCATTTATATGGTCAATTTTTGAGGAAGTACCATGTGGCACTGAGAAGAAGGTATATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CCA 90 bp | GAAATTGAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGTTCATaGATTGGCAGGATTAATATAGTAAAAATGGCTATCCTGCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: EIEEDLRRWKDLPCS*IGRINIVKMAILLK Trigger: TTTCAGCAGGATAGCCATTTTTACTATATTAATCCTGCCAATCCATGAACATGGGAGATCTTTCCATCTTCTGAGATCTTCTTCAATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTACGGACTACAGAAGCAACACAGCTCCTGGGACAGACTCCACTTCGCACGATCAAAAATTCAGATaGCAGCAGATTCTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ESTDYRSNTAPGTDSTSHDQKFR*QQILAR Trigger: CCTTGCCAGAATCTGCTGTCATCTGAATTTTTGATC...GTGCGAAGTGGAGTCTGTCCCAGGAGCTGTGTTGCTTCTGTAGTCCGTACTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTACGGACTACAGAAGCAACACAGCTCCTGGGACAGACTCCACTTCGCACACCCAATTCATTCTCTaGAGCCACAATTACTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ESTDYRSNTAPGTDSTSHTQFIL*SHNYSD Trigger: ATCAGAGTAATTGTGGCTTCAGAGAATGAATTGGGT...GTGCGAAGTGGAGTCTGTCCCAGGAGCTGTGTTGCTTCTGTAGTCCGTACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | CTCACCAGAGACTATGAAAGCCAGAAGATCCTGGACAGATGTTACACAGACCCTCCACAATGGAGAAGCTaGAGAAAGTACCCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LTRDYESQKILDRCYTDPPQWRS*RKYPRS Trigger: GCTCCTTGGGTACTTTCTCCAGCTTCTCCATTGTGG...AGGGTCTGTGTAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCTCTGGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTATGCCAAGAGCATTGCTaGGTGGATACTTCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GHLLIHIQLESRAPGYWLCQEHC*VDTSGK Trigger: CTTCCCAGAAGTATCCACTCAGCAATGCTCTTGGCA...TAACCAGTACCCCGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTACGGACTACAGAAGCAACACAGCTCCTGGGACAGACTCCACTTCGCACAAGCCAATATTCACATaGGAACTGAACAACACTCTA | + |
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Preference number: 2 (lower is better) Translates to: ESTDYRSNTAPGTDSTSHKPIFT*ELNNTL Trigger: TAGAGTGTTGTTCAGTTCCCATGTGAATATTGGCTT...GTGCGAAGTGGAGTCTGTCCCAGGAGCTGTGTTGCTTCTGTAGTCCGTACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | CTCACCAGAGACTATGAAAGCCAGAAGATCCTGGACAGATGTTACACAGACCCTAGGACCCAATTTTGTTaGTTACAGGAAACCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: LTRDYESQKILDRCYTDPRTQFC*LQETHL Trigger: GAGGTGGGTTTCCTGTAAGCAACAAAATTGGGTCCT...AGGGTCTGTGTAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCTCTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | ATAAATGGAGAGAAACTCGAAGCAATCCCACTAAAACCAGGGACTAGACAAGGCACACAGGGCCCACAATaGAGAAGCTGGAGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: INGEKLEAIPLKPGTRQGTQGPQ*RSWRKY Trigger: GTACTTTCTCCAGCTTCTCCATTGTGGGCCCTGTGT...GCCTTGTCTAGTCCCTGGTTTTAGTGGGATTGCTTCGAGTTTCTCTCCATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 90 bp | AGACATAGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTaGCTTACAGGAAACCCACCTCAGGGAAAAGGTCAGACACTACCT | + |
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Preference number: 2 (lower is better) Translates to: RHRLIDWLHKQDPIL*LTGNPPQGKGQTLP Trigger: AGGTAGTGTCTGACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTGCTTACAGGAAACCCACCTCAGGGAAAAGGTCAGACACTACCTCAGAGCCACCAACAGATTGTaGAAGGATTTTTACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: FCCLQETHLREKVRHYLRATNRL*KDFYQS Trigger: GGATTGGTAAAAATCCTTTCACAATCTGTTGGTGGC...TCTGAGGTAGTGTCTGACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGATGTTACACAGACCCTAAGAGAACACAAATGCCAGCTCAGGCTACTATAATGGTACTGGTAGAGTaGCAGACAGGTAGATCAATG | + |
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Preference number: 2 (lower is better) Translates to: DRCYTDPKRTQMPAQATIMVLVE*QTGRSM Trigger: CATTGATCTACCTGTCTGTCACTCTACCAGTACCAT...TATAGTAGCCTGAGCTGGCATTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAACTCATAGCCCTGAGTaGCTCCAAAAAGAAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: GHLLIHIQLESRAPGYWLTHSPE*LQKETR Trigger: TCTAGTTTCTTTTTGGAGGCACTCAGGGCTATGAGT...TAACCAGTACCCCGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAAATCTTCCAAGCAAATaGTCCGAAGAAACAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GHLLIHIQLESRAPGYWLNLPSK*SEETSW Trigger: CCAGCTTGTTTCTTCGGACCATTTGCTTGGAAGATT...TAACCAGTACCCCGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGATGTTACACAGACCCTAAGAGAACACAAATGCCAGCTCAGGCTACTATATTGATGACCCAGAAATaGATCCATACACCTATGGTC | + |
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Preference number: 2 (lower is better) Translates to: DRCYTDPKRTQMPAQATILMTQK*IHTPMV Trigger: GACCATAGGTGTATGGATTCATTTCTGGGTCATCAA...TATAGTAGCCTGAGCTGGCATTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTGCTTACAGGAAACCCACCTCAGGGAAAAGGTCAGACACTACCTCAGAAAGAGCATTGCTGAGTaGATACTTCTGGGAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: FCCLQETHLREKVRHYLRKSIAE*ILLGRN Trigger: ATTTCTTCCCAGAAGTATCCACTCAGCAATGCTCTT...TCTGAGGTAGTGTCTGACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAATAAAAGAACCTCTGGTGGAATCACCATGCCTGACATTAAGCTGTACCTCTTCCATTGCTGGTaGGATTGCAAGCTTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: LNNKRTSGGITMPDIKLYLFHCW*DCKLVQ Trigger: TTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAG...GTACAGCTTAATGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAATAAAAGAACCTCTGGTGGAATCACCATGCCTGACATTAAGCTGTACGATGACAGCAGATTCTaGCAAGGATGTGGAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LNNKRTSGGITMPDIKLYDDSRF*QGCGER Trigger: TCTTTCTCCACATCCTTGCCAGAATCTGCTGTCATC...GTACAGCTTAATGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACTGGTGCTGGCACAACTaGCGGTTATCATGTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNWCWHN*RLSCRR Trigger: TCTTCTACATGATAACCGCCAGTTGTGCCAGCACCA...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTGCTTACAGGAAACCCACCTCAGGGAAAAGGTCAGACACTACCTCAGAGAAGATCTCAGAAGATaGAAAGATCTCCCATGTTCA | + |
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Preference number: 2 (lower is better) Translates to: FCCLQETHLREKVRHYLREDLRR*KDLPCS Trigger: TGAACATGGGAGATCTTTCCATCTTCTGAGATCTTC...TCTGAGGTAGTGTCTGACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGATGTTACACAGACCCTAAGAGAACACAAATGCCAGCTCAGGCTACTATACATAGACTAATAGACTaGCTACACAAACAGGACCCA | + |
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Preference number: 2 (lower is better) Translates to: DRCYTDPKRTQMPAQATIHRLID*LHKQDP Trigger: TGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCTATG...TATAGTAGCCTGAGCTGGCATTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 90 bp | AAAAGACATAGACTAATAGACTGGCTACACAAACAGGACCCAATTTaGTTGCTTACAGGAAACCCACCTCAGGGAAAAGGTCAGACACTA | + |
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Preference number: 2 (lower is better) Translates to: KRHRLIDWLHKQDPI*LLTGNPPQGKGQTL Trigger: TAGTGTCTGACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCTATGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACGTTTTAGTTAATTCCTaGGACCTAGGTTGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNVLVNS*DLGWPA Trigger: TGCAGGCCAACCTAGGTCTCAGGAATTAACTAAAAC...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGATAGTATATATAAGTaGCCCCAAAAATTCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GHLLIHIQLESRAPGYWLDSIYK*PQKFHQ Trigger: CTGGTGGAATTTTTGGGGTCACTTATATATACTATC...TAACCAGTACCCCGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | CTCACCAGAGACTATGAAAGCCAGAAGATCCTGGACAGATGTTACACAGACCCTAAATACAGAAGTGGATaGTCACAGTCATCTATAAGA | + |
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Preference number: 2 (lower is better) Translates to: LTRDYESQKILDRCYTDPKYRSG*SQSSIR Trigger: TCTTATAGATGACTGTGAGCATCCACTTCTGTATTT...AGGGTCTGTGTAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCTCTGGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 90 bp | AATGGTGCTGGCACAACTGGCGGTTATCATGTAGAAGAATGTGAATaGATCCTTTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: NGAGTTGGYHVEECE*ILSYLLVQSSSLSG Trigger: TCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAAAGGATCAATTCACATTCTTCTACATGATAACCGCCAGTTGTGCCAGCACCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACATTGCAAACTTTATATaGCCCAGTACAGGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNIANFI*PSTGET Trigger: GGTTTCCCCTGTACTGGGGCATATAAAGTTTGCAAT...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATGGATACTAACCGAAGTTGAACTCTTACTGAGATaGATAGGTTTTGATCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: DRFWKQKPNRDTWILTEVELLLR*IGFDPR Trigger: TCTGGGATCAAAACCTATTCATCTCAGTAAGAGTTC...AACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCGGTGGAACAATAATATaGACTAACCAGAACCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPGGTII*TNQNPQ Trigger: CTGGGGGTTCTGGTTAGTTCATATTATTGTTCCACC...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACTATGGTACAGTTACATaGTGGAGTACTACTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNYGTVT*WSTTQL Trigger: TAGCTGAGTAGTACTCCATCATGTAACTGTACCATA...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATGGATACTAACCGAAGTTACTAGAAAACCTGGATaGAATGGACAACTTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: DRFWKQKPNRDTWILTEVTRKPG*NGQLPR Trigger: TCTAGGAAGTTGTCCATTTCATCCAGGTTTTCTAGT...AACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAAGTTTGGAGCTAAGGTGAAAGGATGGATTATCCAGAGACTACCTCATAGACCTAGGTTGGCCTaGATTTTACTTTCTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: ETKFGAKVKGWIIQRLPHRPRLA*ILLSLF Trigger: AAAAAGAGAAAGTAAAATGCAGGCCAACCTAGGTCT...ATGAGGTAGTCTCTGGATAATCCATCCTTTCACCTTAGCTCCAAACTTTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGAGACAGGAACAAGAAAGTGACATCAGTGTTCTTCTGTTACTGCCAAGAAATCTCAAAGGCAAGTaGTTAGAGAATAGCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: SLRQEQESDISVLLLLPRNLKGK*LENSKP Trigger: AGGTTTGCTATTCTCTAACCACTTGCCTTTGAGATT...TCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTTGTTCCTGTCTCAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATGGATACTAACCGAAGTTAAGCTCAAGTCTAAGTaGATCAAAGACCTCCACATA | + |
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Preference number: 2 (lower is better) Translates to: DRFWKQKPNRDTWILTEVKLKSK*IKDLHI Trigger: TATGTGGAGGTCTTTGATCCACTTAGACTTGAGCTT...AACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR TCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACGAAGAAGTCAAAATATaGCTATTTGCTGGCGATATG | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNEEVKI*LFAGDM Trigger: CATATCGCCAGCAAATAGTCATATTTTGACTTCTTC...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCTTTTTCAACAAATGGTaGTGGCACAACTGGCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPFFNKW*WHNWRL Trigger: TAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAAA...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GACATAACAACAGAACCTGAGGAAATCCAAAATATCATCAGATCCTACTACAAAACACTCTTCCATTGCTaGTGGGATTGCAAGCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: DITTEPEEIQNIIRSYYKTLFHC*WDCKLV Trigger: TACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGT...TTTGTAGTAGGATCTGATGATATTTTGGATTTCCTCAGGTTCTGTTGTTATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR GCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACTCCACATCCTTGGTATaGCAATTTTATGGAAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: RLIDWLHKQDPILLLTGNSTSLV*QFYGSN Trigger: ATTACTTCCATAAAATTGGCATACCAAGGATGTGGA...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATGGATACTAACCGAAGTTTGGATACAGAAATTATaGTACAGTTACATGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: DRFWKQKPNRDTWILTEVWIQKL*YSYMME Trigger: CTCCATCATGTAACTGTACCATAATTTCTGTATCCA...AACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGATCAGGAATTCAAGGCCCATTCCTAAACATAATAATAGCAATATACACATTCTGGCAAGGATGTaGAGAAAGAGGAACACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GKIRNSRPIPKHNNSNIHILARM*RKRNTL Trigger: AAGAGTGTTCCTCTTTCTCCACATCCTTGCCAGAAT...GTGTATATTGCTATTATTATGTTTAGGAATGGGCCTTGAATTCCTGATCTTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR TCA 90 bp | GACATAACAACAGAACCTGAGGAAATCCAAAATATCATCAGATCCTACTACAAAACAGGAACAAGAAAGTaGCATCAGTGTTCTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DITTEPEEIQNIIRSYYKTGTRK*HQCSSV Trigger: AACAGAAGAACACTGATGTCACTTTCTTGTTCCTGT...TTTGTAGTAGGATCTGATGATATTTTGGATTTCCTCAGGTTCTGTTGTTATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CCA 90 bp | GACATAACAACAGAACCTGAGGAAATCCAAAATATCATCAGATCCTACTACAAACTGAGTGGATACTTCTaGGAAGAAATCACAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: DITTEPEEIQNIIRSYYKLSGYF*EEITVY Trigger: GTAAACTGTGATTTCTTCCCAGAAGTATCCACTCAG...TTTGTAGTAGGATCTGATGATATTTTGGATTTCCTCAGGTTCTGTTGTTATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGATCAGGAATTCAAGGCCCATTCCTAAACATAATAATAGCAATATACACAAAGCTTCAAAGATATaGGCACAGGGGAAAAATTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKIRNSRPIPKHNNSNIHKASKI*AQGKNS Trigger: GGAATTTTTCCCCTGTGCCCATATCTTTGAAGCTTT...GTGTATATTGCTATTATTATGTTTAGGAATGGGCCTTGAATTCCTGATCTTTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR TCA 90 bp | GACATAACAACAGAACCTGAGGAAATCCAAAATATCATCAGATCCTACTACAAAGGGAACAAATACCCATaGAAGTATTTCAGAGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: DITTEPEEIQNIIRSYYKGNKYP*KYFRDK Trigger: TTTGTCTCTGAAATACTTTCATGGGTATTTGTTCCC...TTTGTAGTAGGATCTGATGATATTTTGGATTTCCTCAGGTTCTGTTGTTATGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCAAGAGTTTAAGAAGCTaGACTCCAGAAACTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPKSLRS*TPETQI Trigger: TATTTGAGTTTCTGGAGTCCAGCTTCTTAAACTCTT...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | CCCAGCCAGAGGAGAGGTGGCCGCCTGGGAAGGCTTTaGCCGCCAGAGCATGTGAATGAGCCATCTTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: PSQRRGGRLGRL*PPEHVNEPSCI Trigger: GATACAAGATGGCTCATTCACATGCTCTGGCGGTCAAAGCCTTCCCAGGCGGCCACCTCTCCTCTGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | TGCCTCCTGGGTCCCTCAGAGACTAGTCTGCACAGGTaGGAGTACGGACTACAGAAGCAACACAGCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLLGPSETSLHR*EYGLQKQHSSW Trigger: CCAGGAGCTGTGTTGCTTCTGTAGTCCGTACTCTCACCTGTGCAGACTAGTCTCTGAGGGACCCAGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCGCTAGCTCCTCCATTGGGAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLAPPLGAL Trigger: CAGGGCTCCCAATGGAGGAGCTAGCGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR GCA 72 bp | AACCATCTTGCCTCCTGGGTCCCTCAGAGACTAGTCTaGACAGGTGAGAGTACGGACTACAGAAGCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: NHLASWVPQRLV*TGESTDYRSNT Trigger: TGTGTTGCTTCTGTAGTCCGTACTCTCACCTGTGCAGACTAGTCTCTGAGGGACCCAGGAGGCAAGATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR GCA 72 bp | TTGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGGAAACCCAGGGCAAAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LEERPLGIANFI*PSTGETQGKEA Trigger: TGCTTCTTTGCCCTGGGTTTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR GCA 72 bp | GAGGCTATGCTCGTTCCTGGCAAATACAGAAGTGGATaGTCACAGTCATCTATAAGATGGAACACAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAMLVPGKYRSG*SQSSIRWNTGP Trigger: GGGCCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGAACGAGCATAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR GCA 72 bp | TGGCAAGGATGTGGAGAAAGAGGAACACTCTTCCATTaGTGGTGGGATTGCAAGCTTGTACAACCACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WQGCGERGTLFH*WWDCKLVQPLW Trigger: CCAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGTTCCTCTTTCTCCACATCCTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | TGTTTCAGTTCTTCATCTTCAACCAGGAGGCAGGTCTaGTCGGCAGATATCTTTGCACCTTCCCTGCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFSSSSSTRRQV*SADIFAPSLQE Trigger: CTCTTGCAGGGAAGGTGCAAAGATATCTGCCGATCAGACCTGCCTCCTGGTTGAAGATGAAGAACTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR GCA 72 bp | GGAGAAAGAGGAACACTCTTCCATTGCTGGTGGGATTaGAAGCTTGTACAACCACTCTGGAAATCAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GERGTLFHCWWD*KLVQPLWKSVW Trigger: CCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGTTCCTCTTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTaGAAATCAGTCTGGTGGTTCCTCAGAAAATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCWWDCKLVQPL*KSVWWFLRKLD Trigger: GTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CAAGGATGTGGAGAAAGAGGAACACTCTTCCATTGCTaGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGCGERGTLFHC*WDCKLVQPLWK Trigger: TTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGTTCCTCTTTCTCCACATCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | GAAGGTGTCTGCAACCCTATAGGTGGAACAATAATATaGACTAACCAGAACCCCCAGATCTCGTGTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EGVCNPIGGTII*TNQNPQISCLA Trigger: AGCTAGACACGAGATCTGGGGGTTCTGGTTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGACACCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | TTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCTaGCTAGGCCATCTTTTGATACATATACAGCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHVQWASLSSDG*LGHLLIHIQLE Trigger: CTCTAGCTGTATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAGATGTTACACAGACCCTAAGAGAACACAAATGCCAGCTCAGGCTACTATATTCCTGAGACCTAGGTaGGCCTGCATTTTACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRCYTDPKRTQMPAQATIFLRPR*ACILLS Trigger: AGAAAGTAAAATGCAGGCCAACCTAGGTCTCAGGAA...TATAGTAGCCTGAGCTGGCATTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | CGGAATCCAAGAACACATCAAAATGACCATCAATCATaGCTAAGTAGACTTCATCCCAGGGATGCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RNPRTHQNDHQS*LSRLHPRDAGM Trigger: CATCCCTGCATCCCTGGGATGAAGTCTACTTAGTCATGATTGATGGTCATTTTGATGTGTTCTTGGATTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | GACTTCTCACCAGAGACTATGAAAGCCAGAAGATCCTaGACAGATGTTACACAGACCCTAAGAGAACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: DFSPETMKARRS*TDVTQTLREHK Trigger: TTTGTGTTCTCTTAGGGTCTGTGTAACATCTGTCCAGGATCTTCTGGCTTTCATAGTCTCTGGTGAGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | TGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTaGTTCCTCAGAAAATTGGACATAGTACTACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CKLVQPLWKSVW*FLRKLDIVLPE Trigger: TTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | GATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTaGTGGTTCCTCAGAAAATTGGACATAGTACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: DCKLVQPLWKSV*WFLRKLDIVLP Trigger: TGGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | GACTTCAACACCTCACTCTCACCAATGGACAGATTCTaGAAACAGAAACCAAACAGAGACACATGGATACTA | + |
|
Preference number: 3 (lower is better) Translates to: DFNTSLSPMDRF*KQKPNRDTWIL Trigger: TAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTCCATTGGTGAGAGTGAGGTGTTGAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | CTTCTTCTCAGTGCCACATGGTACTTCCTCAAAAATTaGCCATATAAATGGTCACAAATTAGGCCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLSATWYFLKN*PYKWSQIRPPQ Trigger: CTGTGGAGGCCTAATTTGTGACCATTTATATGGTCAATTTTTGAGGAAGTACCATGTGGCACTGAGAAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | ATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTaGTGGCTGACTAGGCCATCTTTTGATACATATACA | + |
|
Preference number: 3 (lower is better) Translates to: IKFACPMGLSFQ*WLTRPSFDTYT Trigger: TGTATATGTATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CTGTTACTGCCAAGAGCATTGCTGAGTGGATACTTCTaGGAAGAAATCACAGTTTACAAGAAATCAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPRALLSGYF*EEITVYKKSVW Trigger: CCATACTGATTTCTTGTAAACTGTGATTTCTTCCCAGAAGTATCCACTCAGCAATGCTCTTGGCAGTAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CAGTGTTCTTCTGTTACTGCCAAGAGCATTGCTGAGTaGATACTTCTGGGAAGAAATCACAGTTTACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QCSSVTAKSIAE*ILLGRNHSLQE Trigger: TTCTTGTAAACTGTGATTTCTTCCCAGAAGTATCCACTCAGCAATGCTCTTGGCAGTAACAGAAGAACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CCTTTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTaGATCAAAGACCTCCACATAAAAGCAGAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLSPCTKLKSK*IKDLHIKAETL Trigger: CAGTGTCTCTGCTTTTATGTGGAGGTCTTTGATCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGATCAGGAATTCAAGGCCCATTCCTAAACATAATAATAGCAATATACACTTACTGCCAAGAGCATaGCTGAGTGGATACTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GKIRNSRPIPKHNNSNIHLLPRA*LSGYFW Trigger: CCAGAAGTATCCACTCAGCAATGCTCTTGGCAGTAA...GTGTATATTGCTATTATTATGTTTAGGAATGGGCCTTGAATTCCTGATCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCAACAATAAAAGAACCTCTGGTGGAATCACCATGCCTGACATTAAGCTGTACTGGGAACTCATAAAATaGCAAAGATTCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNNKRTSGGITMPDIKLYWELIK*QRFCKA Trigger: TGCCTTACAGAATCTTTGCAATTTTATGAGTTCCCA...GTACAGCTTAATGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | ATGAAAGTATTTCAGAGACAAAGTTTGGAGCTAAGGTaGAAGGATGGATTATCCAGAGACTACCTCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MKVFQRQSLELR*KDGLSRDYLIW Trigger: CCAGATGAGGTAGTCTCTGGATAATCCATCCTTTCACCTTAGCTCCAAACTTTGTCTCTGAAATACTTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | AGTTCAAAGAATCAACCAAATGCGGAGCTGGTTCTTTaGGAAAATAAACAAGGTAGACAAACCCTTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSKNQPNAELVL*ENKQGRQTLSQ Trigger: CTGGCTAAGGGTTTGTCTACCTTGTTTATTTTCTCAAAGAACCAGCTCCGCATTTGGTTGATTCTTTGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | CAGAGTAAAAGACTGGAAAACAATCTTCCAAGCAAATaGTCCGAAGAAACAAGCTGGAGTAGCCATTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSKRLENNLPSK*SEETSWSSHSN Trigger: ATTAGAATGGCTACTCCAGCTTGTTTCTTCGGACCATTTGCTTGGAAGATTGTTTTCCAGTCTTTTACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | GTTAATACTAGAAAGCTTGAGACAGGAACAAGAAAGTaGCATCAGTGTTCTTCTGTTACTGCCAAGAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VNTRKLETGTRK*HQCSSVTAKSI Trigger: AATGCTCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTTGTTCCTGTCTCAAGCTTTCTAGTATTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | TGGGCATATATGCAGAATAAGTTCCAACTGGTAATATaGACACATGCTCCACTATGTTCATCACAGCCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: WAYMQNKFQLVI*THAPLCSSQPY Trigger: ATAAGGCTGTGATGAACATAGTGGAGCATGTGTTCATATTACCAGTTGGAACTTATTCTGCATATATGCCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | TCTCTGAAGAAAGAAATTGAAGAAGATCTCAGAAGATaGAAAGATCTCCCATGTTCATGGATTGGCAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SLKKEIEEDLRR*KDLPCSWIGRI Trigger: AATCCTGCCAATCCATGAACATGGGAGATCTTTCCATCTTCTGAGATCTTCTTCAATTTCTTTCTTCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | TACAACGTTGGAGATAGAAACCATAGGAAAGAAATCTaGAACTATAGATGTGAGCGTCAGCAACAGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: YNVGDRNHRKEI*NYRCERQQQNT Trigger: TGTATTCTGTTGCTGACGCTCACATCTATAGTTCCAGATTTCTTTCCTATGGTTTCTATCTCCAACGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | ATGACTATTTGCTGGCGATATGATAGTATATATAAGTaGCCCCAAAAATTCCACCAGAGAACTCCTAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: MTICWRYDSIYK*PQKFHQRTPKP Trigger: AGGTTTAGGAGTTCTCTGGTGGAATTTTTGGGGTCACTTATATATACTATCATATCGCCAGCAAATAGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | CAGAACAACAATGGCTTGTGCTGTAAGATCAAGAATTaGCAAATGGGAACTCATAAAATTGCAAAGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QNNNGLCCKIKN*QMGTHKIAKIL Trigger: CAGAATCTTTGCAATTTTATGAGTTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGTTGTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | ACAATGGCTTGTGCTGTAAGATCAAGAATTGACAAATaGGAACTCATAAAATTGCAAAGATTCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TMACAVRSRIDK*ELIKLQRFCKA Trigger: TGCCTTACAGAATCTTTGCAATTTTATGAGTTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CCA 72 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATaGATACTAACCGAAGTTATGAAACAAATGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: DRFWKQKPNRDT*ILTEVMKQMDL Trigger: TAAATCCATTTGTTTCATAACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR TCA 72 bp | AATGCATTCCCCATCAAAATTCCAATACTTCTTCACTaGGTTAGAATGGGCTATTTGCAAATTCATTTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: NAFPIKIPILLH*VRMGYLQIHFE Trigger: TTCGAAATGAATTTGCAAATAGCCCATTCTAACTCAGTGAAGAAGTATTGGAATTTTGATGGGGAATGCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CAA 72 bp | GAGGAACACTCTTCCATTGCTGGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGGTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEHSSIAGGIAS*YNHSGNQSGGS Trigger: GGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| 3UTR CAA 72 bp | CTGGCAAGGATGTGGAGAAAGAGGAACACTCTTCCATaGCTGGTGGGATTGCAAGCTTGTACAACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LARMWRKRNTLP*LVGLQACTTTL Trigger: CAGAGTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGAGTGTTCCTCTTTCTCCACATCCTTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| CDS-3UTR TCA 90 bp | ATAAATGGAGAGAAACTCGAAGCAATCCCACTAAAACCAGGGACTAGACAAGGCTGCTTGGCAAAGCGGTaGGTCATAGACACACCAACC | + |
|
Preference number: 4 (lower is better) Translates to: INGEKLEAIPLKPGTRQGCLAKR*VIDTPT Trigger: GGTTGGTGTGTCTATGACTCACCGCTTTGCCAAGCA...GCCTTGTCTAGTCCCTGGTTTTAGTGGGATTGCTTCGAGTTTCTCTCCATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| CDS-3UTR TCA 90 bp | AGCTTGAGACAGGAACAAGAAAGTGACATCAGTGTTCTTCTGTTACTGCCAAGATGGTGGTGTTTCCCATaGTGGAGATGGTGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRQEQESDISVLLLLPRWWCFP*WRWCRG Trigger: GCCTCTACACCATCTCCATCATGGGAAACACCACCA...TCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTTGTTCCTGTCTCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTTTTGATACATATACAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGAACAGATGATTCCATaGAAGAGAACCCATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLLIHIQLESRAPGYWLEQMIP*KRTHGG Trigger: TCCTCCATGGGTTCTCTTTCATGGAATCATCTGTTC...TAACCAGTACCCCGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| CDS-3UTR TCA 90 bp | AGCTTGAGACAGGAACAAGAAAGTGACATCAGTGTTCTTCTGTTACTGCCAAGAGGTAGATATTGGCCATaGGAACATGGACCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRQEQESDISVLLLLPRGRYWP*EHGPVE Trigger: CTCCACTGGTCCATGTTCTCATGGCCAATATCTACC...TCTTGGCAGTAACAGAAGAACACTGATGTCACTTTCTTGTTCCTGTCTCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
||
| CDS-3UTR GCA 90 bp | CTCAACAATAAAAGAACCTCTGGTGGAATCACCATGCCTGACATTAAGCTGTACCAGTGCACCTTTCTCTaGAAGAGGAGGCGAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LNNKRTSGGITMPDIKLYQCTFL*KRRRVI Trigger: AATTACTCGCCTCCTCTTGCAGAGAAAGGTGCACTG...GTACAGCTTAATGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCGAAAGAAGGTGGGAATaGCAGAAGGGCAGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPERRWE*QKGRRL Trigger: CAAGCGCCTGCCCTTCTGCCATTCCCACCTTCTTTC...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | GAGACAAAGTTTGGAGCTAAGGTGAAAGGATGGATTATCCAGAGACTACCTCATGTCGTTCAGTCCAAGTaGCTGTGTTCAAGACACTCT | + |
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Preference number: 4 (lower is better) Translates to: ETKFGAKVKGWIIQRLPHVVQSK*LCSRHS Trigger: AGAGTGTCTTGAACACAGCCACTTGGACTGAACGAC...ATGAGGTAGTCTCTGGATAATCCATCCTTTCACCTTAGCTCCAAACTTTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTTGTTGCTTACAGGAAACGAGAACATGGACCAGTaGAGAGGCATGCTTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RLIDWLHKQDPILLLTGNENMDQ*RGMLGK Trigger: TTTGCCAAGCATGCCTCTCCACTGGTCCATGTTCTC...GTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 72 bp | AGACTAATAGACTGGCTACACAAACAGGACCCAATTTaGTTGCTTACAGGAAACCCACCTCAGGGAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RLIDWLHKQDPI*LLTGNPPQGKG Trigger: ACCTTTTCCCTGAGGTGGGTTTCCTGTAAGCAACAAAATTGGGTCCTGTTTGTGTAGCCAGTCTATTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 72 bp | AGTGACATCAGTGTTCTTCTGTTACTGCCAAGAGCATaGCTGAGTGGATACTTCTGGGAAGAAATCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SDISVLLLLPRA*LSGYFWEEITV Trigger: AACTGTGATTTCTTCCCAGAAGTATCCACTCAGCAATGCTCTTGGCAGTAACAGAAGAACACTGATGTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 72 bp | GCATATGTAGCAGAAGGTGACCTAGTCTGTCATCAATaGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATA | + |
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Preference number: 4 (lower is better) Translates to: AYVAEGDLVCHQ*EERPLGIANFI Trigger: TATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCAATTGATGACAGACTAGGTCACCTTCTGCTACATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAATaGGACATAGTACTACCAGAATATCCAGCAATACCT | + |
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Preference number: 4 (lower is better) Translates to: PLWKSVWWFLRK*DIVLPEYPAIP Trigger: AGGTATTGCTGGATATTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTaGCAGATCCCTTTAGCTCCTTGGGTACTTTCGCTA | + |
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Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIG*QIPLAPWVLSL Trigger: TAGCGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR GCA 90 bp | GACATAACAACAGAACCTGAGGAAATCCAAAATATCATCAGATCCTACTACAAATTGAACCAAAGGAGCTaGATGACTGTAGGGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DITTEPEEIQNIIRSYYKLNQRS*MTVGSV Trigger: CACACTCCCTACAGTCATGCAGCTCCTTTGGTTCAA...TTTGTAGTAGGATCTGATGATATTTTGGATTTCCTCAGGTTCTGTTGTTATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR GCA 90 bp | GACAGATTCTGGAAACAGAAACCAAACAGAGACACATGGATACTAACCGAAGTTACTCTTCAGGATAAGTaGATAGGAGAGTACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: DRFWKQKPNRDTWILTEVTLQDK*IGEYNE Trigger: CTCATTGTACTCTCCTATGCACTTATCCTGAAGAGT...AACTTCGGTTAGTATCCATGTGTCTCTGTTTGGTTTCTGTTTCCAGAATCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGATCAGGAATTCAAGGCCCATTCCTAAACATAATAATAGCAATATACACGATATCCTCAAATCCTaGGATGCCGGTGAGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: GKIRNSRPIPKHNNSNIHDILKS*DAGEDE Trigger: TTCATCCTCACCGGCATCCCAGGATTTGAGGATATC...GTGTATATTGCTATTATTATGTTTAGGAATGGGCCTTGAATTCCTGATCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | TTCCAACTCACATCAGTCAGAATGTCTAAGATCAAAAATTCAGATGACAGCAGAATGGAGATCCAGAGATaGATATCCTCAAATCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FQLTSVRMSKIKNSDDSRMEIQR*ISSNPG Trigger: CCCAGGATTTGAGGATATCCATCTCTGGATCTCCAT...TCTGCTGTCATCTGAATTTTTGATCTTAGACATTCTGACTGATGTGAGTTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCGGCAGAATAAGGGAATaGAGATCCAGAGATGGATAT | + |
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Preference number: 4 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPGRIRE*RSRDGY Trigger: ATATCCATCTCTGGATCTCCATTCCCTTATTCTGCC...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS-3UTR CCA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCAGAAAGGATCATGAGTaGTGTTTGTTACTTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPRKDHE*CLLLLT Trigger: TGTCAGAAGTAACAAACACCACTCATGATCCTTTCT...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS TCA 90 bp | GGACATAGAGAACCAGAACAGCCAGCATGTGGGACAGACAGTTGTTaGGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTGTTCAAGACAC | + |
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Preference number: 5 (lower is better) Translates to: GHREPEQPACGTDSC*EPGVVQSKWLCSRH Trigger: GTGTCTTGAACACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTGGCTGTTCTGGTTCTCTATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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| CDS-3UTR CAA 90 bp | AAGTGGATGCTCACAGTCATCTATAAGATGGAACACAGGGCCCACAATGGAGAAAATCCGTACCAGCTGTaGACTCTGATGTCAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: KWMLTVIYKMEHRAHNGENPYQL*TLMSAQ Trigger: CTGCGCTGACATCAGAGTCAACAGCTGGTACGGATT...TTCTCCATTGTGGGCCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS GCA 90 bp | TCGTTCAGTCCAAGTGGCTGTGTTCAAGACACTCTTCAGGATAAGTaGATAGGAGAGTACAATGAGCAGAGGGTCCAATACAATAATGAG | + |
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Preference number: 5 (lower is better) Translates to: SFSPSGCVQDTLQDK*IGEYNEQRVQYNNE Trigger: CTCATTATTGTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAGAGTGTCTTGAACACAGCCACTTGGACTGAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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| CDS-3UTR CAA 90 bp | AAGTATTCCATGATAAAACCAAATTCACACAATATCGTTCCACAAATCCAGCCCGAGGCGAGTAATTCCTaGACGGATCTGCTTTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KYSMIKPNSHNIVPQIQPEASNS*TDLLCL Trigger: AAGACAAAGCAGATCCGTCAAGGAATTACTCGCCTC...GGGCTGGATTTGTGGAACGATATTGTGTGAATTTGGTTTTATCATGGAATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209473.4 |
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| CDS TCA 72 bp | GAACCAGAACAGCCAGCATGTGGGACAGACAGTTGTTaGGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: EPEQPACGTDSC*EPGVVQSKWLC Trigger: ACACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTGGCTGTTCTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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| CDS CAA 72 bp | AGAACCAGAACAGCCAGCATGTGGGACAGACAGTTGTaGAGAGCCCGGAGTCGTTCAGTCCAAGTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTRTASMWDRQL*RARSRSVQVAV Trigger: CACAGCCACTTGGACTGAACGACTCCGGGCTCTCAACAACTGTCTGTCCCACATGCTGGCTGTTCTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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| CDS CCA 72 bp | GGGAATGGAGATCCAGAGATGGATATCCTCAAATCCTaGGATGCCGGTGAGGATGAAGTAGAAAGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: GNGDPEMDILKS*DAGEDEVERIM Trigger: CATGATCCTTTCTACTTCATCCTCACCGGCATCCCAGGATTTGAGGATATCCATCTCTGGATCTCCATTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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| CDS GCA 72 bp | CCAAGTGGCTGTGTTCAAGACACTCTTCAGGATAAGTaGATAGGAGAGTACAATGAGCAGAGGGTCCAATAC | + |
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Preference number: 6 (lower is better) Translates to: PSGCVQDTLQDK*IGEYNEQRVQY Trigger: GTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAGAGTGTCTTGAACACAGCCACTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098185.2 ENSMUST00000209473.4 |
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