Pregenerated sensors for OLFR632 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073938Ensembl transcript IDs: ENSMUST00000098189.4, ENSMUST00000214711.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCTCTGTGTTGCCGCCACCTATGGCAGGAAGAAACTTCTCTCTTaGGGGCAGAGAGATGCAATGGCCTACAGATCTAGCCGTAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ALCVAATYGRKKLLS*GQRDAMAYRSSRKF Trigger: GAACTTACGGCTAGATCTGTAGGCCATTGCATCTCTCTGCCCTCAAGAGAGAAGTTTCTTCCTGCCATAGGTGGCGGCAACACAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 90 bp | TCTCTCCACTTTGACCTGTTGAGCTCTCTGTGTTGCCGCCACCTATaGCAGGAAGAAACTTCTCTCTTGAGGGCAGAGAGATGCAATGGC | + |
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Preference number: 1 (lower is better) Translates to: SLHFDLLSSLCCRHL*QEETSLLRAERCNG Trigger: GCCATTGCATCTCTCTGCCCTCAAGAGAGAAGTTTCTTCCTGCCATAGGTGGCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR GCA 90 bp | CCAGTCTCTTATTCTCTCCACTTTGACCTGTTGAGCTCTCTGTGTTaGCGCCACCTATGGCAGGAAGAAACTTCTCTCTTGAGGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: PVSYSLHFDLLSSLC*RHLWQEETSLLRAE Trigger: CTCTGCCCTCAAGAGAGAAGTTTCTTCCTGCCATAGGTGGCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAGAGAATAAGAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 90 bp | AATGATATACCAAAGCCAAAGGATGGTACCCTAAGCTGTGTGTACTaGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: NDIPKPKDGTLSCVY*TAYKGAMQANRSTA Trigger: GGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTACACACAGCTTAGGGTACCATCCTTTGGCTTTGGTATATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 90 bp | TGCAGGCAAACAGAAGCACAGCCTGTATTTGAGAGCCACTGGTCTTaGATTTATGAGCAAGTGACTTTGGACACTAGGCCAGAGTATGAA | + |
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Preference number: 1 (lower is better) Translates to: CRQTEAQPVFESHWS*IYEQVTLDTRPEYE Trigger: TTCATACTCTGGCCTAGTGTCCAAAGTCACTTGCTCATAAATTCAAGACCAGTGGCTCTCAAATACAGGCTGTGCTTCTGTTTGCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 90 bp | ATTCCTCTTTCCAGGTTAACAGTCCTATTGATGTTGCTATTGTTCTaGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: IPLSRLTVLLMLLLF*SCQHSHFKERLNQR Trigger: TCTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAACCTGGAAAGAGGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 90 bp | TGCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTaGACCAGAGAATTTCTATTCTCAACGATTTTCAAGGCATCTGAG | + |
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Preference number: 1 (lower is better) Translates to: CYCSGLVNTVISRRD*TREFLFSTIFKASE Trigger: CTCAGATGCCTTGAAAATCGTTGAGAATAGAAATTCTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTAGAAAGGGTTTCAGTGTaGGAGGGGTGGCATGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVERVSV*EGWHES Trigger: ACTTTCATGCCACCCCTCTCACACTGAAACCCTTTC...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTTGCTCTTCGTCTGTCTaGTCCCCCATCCCTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: YWTAYKGAMQANRSTACICSSSV*SPIPED Trigger: ATCTTCAGGGATGGGGGAGCAGACAGACGAAGAGCA...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTATTATTCTCTCCACTTTaGCCTGTTGAGCTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVLFSPL*PVELSV Trigger: CACAGAGAGCTCAACAGGTCAAAGTGGAGAGAATAA...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGTGTTGCCGCCACCTATaGCAGGAAGAAACTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: AIVLVLSTQSFQGETEPECCRHL*QEETSL Trigger: GAGAGAAGTTTCTTCCTGCCATAGGTGGCGGCAACA...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 90 bp | TACCTAAGAATTATGCCTCTTTCCGCCTCCACTGTTAGCCCGCAGTaGTTGGGAGAAGGGATGTCATTTTTGTATGTAGTATTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: YLRIMPLSASTVSPQ*LGEGMSFLYVVLLL Trigger: GAGCAGCAATACTACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGCGGAAAGAGGCATAATTCTTAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTTGAGCTGGTCTTGAATTTATaGGCAAGTGACTTTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: GQLIKGQCRQTEAQPVFELVLNL*ASDFGH Trigger: GTGTCCAAAGTCACTTGCTCATAAATTCAAGACCAG...CTCAAATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAGGGGTGGGTCCTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATTGGCAGTTTTAAGCTGTaGGTTAGCGGAGATGTGATA | + |
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Preference number: 2 (lower is better) Translates to: CVGVGPLGNSSFQVNSPIGSFKL*VSGDVI Trigger: TATCACATCTCCGCTAACTCACAGCTTAAAACTGCC...AATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAGGACCCACCCCTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTATGTCCAAAGGGAATATaGGGAGGATTGATCACTAGT | + |
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Preference number: 2 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVCPKGI*GGLITS Trigger: ACTAGTGATCAATCCTCCCCATATTCCCTTTGGACA...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTTGAGAAGGCAGAAATCTGTTaGAGAAAGGGTTTCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GQLIKGQCRQTEAQPVFEKAEIC*RKGFSV Trigger: CACACTGAAACCCTTTCTCCAACAGATTTCTGCCTT...CTCAAATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTTATCTCATTCAGGGCTaGACTCCAGTCTCTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: YWTAYKGAMQANRSTACIYLIQG*TPVSYS Trigger: AGAATAAGAGACTGGAGTTCAGCCCTGAATGAGATA...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 90 bp | GGGTGGGTCCTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATaGATGTTGCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GWVLLEIPLSRLTVL*MLLLFWSCQHSHFK Trigger: CTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAGGACCCACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTAGAATATGGGGAGGATTaGTCACTAGTGAAAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVEYGED*SLVKML Trigger: TAACATTTTCACTAGTGATCAATCCTCCCCATATTC...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACAAGTAAGGGGGTTCATCTTGGGGAAAGCTACTTCTTCTCCCAGAAGTATTTAGCCCGCAGTTGTTaGGAGAAGGGATGTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: ITSKGVHLGESYFFSQKYLARSC*EKGCHF Trigger: AAAATGACATCCCTTCTCCCAACAACTGCGGGCTAA...ATACTTCTGGGAGAAGAAGTAGCTTTCCCCAAGATGAACCCCCTTACTTGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGATTTCTGAGAGACCATaGTGTCCTATTGGAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: AIVLVLSTQSFQGETEPEISERP*CPIGNH Trigger: GTGGTTTCCAATAGGACACCATGGTCTCTCAGAAAT...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGCTGCTGAAAGGACTCTaGAAAGAATCTTTGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: AIVLVLSTQSFQGETEPELLKGL*KESLTH Trigger: ATGAGTCAAAGATTCTTTTCAGAGTCCTTTCAGCAG...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCACAATTACCTATAGTTCTAGCTCCAGGGAATTAGATCCATCTTTTGACAAGAAACTTCTCTCTTaGGGGCAGAGAGATGCAATG | + |
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Preference number: 2 (lower is better) Translates to: WLTITYSSSSRELDPSFDKKLLS*GQRDAM Trigger: CATTGCATCTCTCTGCCCTCAAGAGAGAAGTTTCTT...GTCAAAAGATGGATCTAATTCCCTGGAGCTAGAACTATAGGTAATTGTGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACAAGTAAGGGGGTTCATCTTGGGGAAAGCTACTTCTTCTCCCAGAAGTATCTAATTCCAAGGAGCTaGAGAAACAGTGATCCACTT | + |
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Preference number: 2 (lower is better) Translates to: ITSKGVHLGESYFFSQKYLIPRS*RNSDPL Trigger: AAGTGGATCACTGTTTCTTCAGCTCCTTGGAATTAG...ATACTTCTGGGAGAAGAAGTAGCTTTCCCCAAGATGAACCCCCTTACTTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | CTATTGGAAACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTGCTAATTAGATCCATCTTTTaGCCTCCATGGGCTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLETTWLLSERKSVICLLIRSIF*PPWAPS Trigger: TGAAGGAGCCCATGGAGGTCAAAAGATGGATCTAAT...TAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGGGGTGGGTCCTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATTACTTTATGGACTTTCTaGCAGCCAAAAGAAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: CVGVGPLGNSSFQVNSPITLWTF*QPKESR Trigger: TCTACTTTCTTTTGGCTGCCAGAAAGTCCATAAAGT...AATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAGGACCCACCCCTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACAAGTAAGGGGGTTCATCTTGGGGAAAGCTACTTCTTCTCCCAGAAGTATATGAATAAAAAGAAGTaGACCTGGGGATGGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: ITSKGVHLGESYFFSQKYMNKKK*TWGWMR Trigger: TCTCATCCATCCCCAGGTTCACTTCTTTTTATTCAT...ATACTTCTGGGAGAAGAAGTAGCTTTCCCCAAGATGAACCCCCTTACTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 90 bp | ATTATGGAGATTTCTGAGAGACCATGGTGTCCTATTGGAAACCACTaGGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTGCTACTATA | + |
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Preference number: 2 (lower is better) Translates to: IMEISERPWCPIGNH*VIVREEICHLPATI Trigger: TATAGTAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAGGACACCATGGTCTCTCAGAAATCTCCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 90 bp | TTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATTGATGTTGCTATaGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LEIPLSRLTVLLMLL*FWSCQHSHFKERLN Trigger: GTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAACCTGGAAAGAGGAATTTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACAAGTAAGGGGGTTCATCTTGGGGAAAGCTACTTCTTCTCCCAGAAGTATAGAGAGCAAAGGTTGTaGAAAAACAGTCACTTATAC | + |
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Preference number: 2 (lower is better) Translates to: ITSKGVHLGESYFFSQKYREQRL*KNSHLY Trigger: GTATAAGTGACTGTTTTTGCACAACCTTTGCTCTCT...ATACTTCTGGGAGAAGAAGTAGCTTTCCCCAAGATGAACCCCCTTACTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCACAATTACCTATAGTTCTAGCTCCAGGGAATTAGATCCATCTTTTGACCATAAAATGAGTATGTaGCAGAAAGGCAGAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: WLTITYSSSSRELDPSFDHKMSM*QKGRNL Trigger: CAGATTTCTGCCTTTCTGTCACATACTCATTTTATG...GTCAAAAGATGGATCTAATTCCCTGGAGCTAGAACTATAGGTAATTGTGAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCACAATTACCTATAGTTCTAGCTCCAGGGAATTAGATCCATCTTTTGACTGTGTGCATACATTGTaGAAACTACTCAGCTTATAC | + |
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Preference number: 2 (lower is better) Translates to: WLTITYSSSSRELDPSFDCVHTL*KLLSLY Trigger: GTATAAGCTGAGTAGTTTTCACAATGTATGCACACA...GTCAAAAGATGGATCTAATTCCCTGGAGCTAGAACTATAGGTAATTGTGAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR TCA 90 bp | CACGTGTGTGCATACATTGTGAAAACTACTCAGCTTATACCTAAGAATTATGCCTCTGAAAAGAATCTTTaGCTCATCCCTCAACTTTAC | + |
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Preference number: 2 (lower is better) Translates to: HVCAYIVKTTQLIPKNYASEKNL*LIPQLY Trigger: GTAAAGTTGAGGGATGAGTCAAAGATTCTTTTCAGA...GGCATAATTCTTAGGTATAAGCTGAGTAGTTTTCACAATGTATGCACACACGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 90 bp | CCTATTGGAAACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTaGCCTGCTACTATAAATAGACAATATTCTACCCAAAACAGAATC | + |
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Preference number: 2 (lower is better) Translates to: PIGNHLVIVREEICH*PATINRQYSTQNRI Trigger: GATTCTGTTTTGGGTAGAATATTGTCTATTTATAGTAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 72 bp | GTTGCCGCCACCTATGGCAGGAAGAAACTTCTCTCTTaGGGGCAGAGAGATGCAATGGCCTACAGATCTAGC | + |
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Preference number: 3 (lower is better) Translates to: VAATYGRKKLLS*GQRDAMAYRSS Trigger: GCTAGATCTGTAGGCCATTGCATCTCTCTGCCCTCAAGAGAGAAGTTTCTTCCTGCCATAGGTGGCGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 72 bp | TCAGGGCTGAACTCCAGTCTCTTATTCTCTCCACTTTaGCCTGTTGAGCTCTCTGTGTTGCCGCCACCTATG | + |
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Preference number: 3 (lower is better) Translates to: SGLNSSLLFSPL*PVELSVLPPPM Trigger: CATAGGTGGCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAGAGAATAAGAGACTGGAGTTCAGCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTCTCCACTTTGACCTGTaGAGCTCTCTGTGTTGCCGC | + |
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Preference number: 3 (lower is better) Translates to: YWTAYKGAMQANRSTACILHFDL*SSLCCR Trigger: GCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAG...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTATTAATCCTCAGCCTCTaGCTCTTCGTCTGTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVLILSL*LFVCLL Trigger: GAGCAGACAGACGAAGAGCAAGAGGCTGAGGATTAA...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 72 bp | CCAAAGCCAAAGGATGGTACCCTAAGCTGTGTGTACTaGACAGCTTATAAAGGGGCAATGCAGGCAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: PKPKDGTLSCVY*TAYKGAMQANR Trigger: TCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTACACACAGCTTAGGGTACCATCCTTTGGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | CACGTGTGTGCATACATTGTGAAAACTACTCAGCTTATACCTAAGAATTATGCCGTTGAGCTCTCTGTGTaGCCGCCACCTATGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HVCAYIVKTTQLIPKNYAVELSV*PPPMAG Trigger: TCCTGCCATAGGTGGCGGCAACACAGAGAGCTCAAC...GGCATAATTCTTAGGTATAAGCTGAGTAGTTTTCACAATGTATGCACACACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | GGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTTGAGAAAGGCAGAAATCTGTaGGAGAAAGGGTTTCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: GQLIKGQCRQTEAQPVFEKGRNL*EKGFQC Trigger: ACACTGAAACCCTTTCTCCAACAGATTTCTGCCTTT...CTCAAATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | CTATTGGAAACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTGCTAACTGTTAGCCCGCAGTaGTTGGGAGAAGGGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: LLETTWLLSERKSVICLLTVSPQ*LGEGMS Trigger: TGACATCCCTTCTCCCAACAACTGCGGGCTAACAGT...TAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 72 bp | AGTGGACCTGGGTTTGATTTCTTAACACCCACACGATaGCTCACAATTACCTATAGTTCTAGCTCCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SGPGFDFLTPTR*LTITYSSSSRE Trigger: TTCCCTGGAGCTAGAACTATAGGTAATTGTGAGCCATCGTGTGGGTGTTAAGAAATCAAACCCAGGTCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGTATGAGCAAGTGACTTaGGACACTAGGCCAGAGTAT | + |
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Preference number: 3 (lower is better) Translates to: AIVLVLSTQSFQGETEPEYEQVT*DTRPEY Trigger: ATACTCTGGCCTAGTGTCCAAAGTCACTTGCTCATA...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTAGGGGTGGGTCCTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATTGAAACCACTTGGTTATaGTCAGAGAGGAAATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: CVGVGPLGNSSFQVNSPIETTWL*SERKSV Trigger: GACAGATTTCCTCTCTGACAATAACCAAGTGGTTTC...AATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAGGACCCACCCCTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTGGAATATGGGGAGGATaGATCACTAGTGAAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: YWTAYKGAMQANRSTACIGIWGG*ITSENV Trigger: AACATTTTCACTAGTGATCAATCCTCCCCATATTCC...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGCCTATTGGAAACCACTaGGTTATTGTCAGAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AIVLVLSTQSFQGETEPEPIGNH*VIVREE Trigger: TTCCTCTCTGACAATAACCAAGTGGTTTCCAATAGG...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 72 bp | TTTCTGAGAGACCATGGTGTCCTATTGGAAACCACTTaGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: FLRDHGVLLETT*LLSERKSVICL Trigger: CAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAGGACACCATGGTCTCTCAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CCA 72 bp | TCCAGGTTAACAGTCCTATTGATGTTGCTATTGTTCTaGTCTTGTCAACACAGTCATTTCAAGGAGAGACTG | + |
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Preference number: 3 (lower is better) Translates to: SRLTVLLMLLLF*SCQHSHFKERL Trigger: CAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR-3UTR CAA 90 bp | ATAACAAGTAAGGGGGTTCATCTTGGGGAAAGCTACTTCTTCTCCCAGAAGTATGCTATTGTTCTGGTCTaGTCAACACAGTCATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: ITSKGVHLGESYFFSQKYAIVLV*STQSFQ Trigger: TTGAAATGACTGTGTTGACAAGACCAGAACAATAGC...ATACTTCTGGGAGAAGAAGTAGCTTTCCCCAAGATGAACCCCCTTACTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 72 bp | ATAAGTTTCCCTTCCATGTCAGGAACATCTCACCCATaGTCATGTAAGAAACTATTATTAAACTGGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: ISFPSMSGTSHP*SCKKLLLNWGH Trigger: GTGGCCCCAGTTTAATAATAGTTTCTTACATGATCATGGGTGAGATGTTCCTGACATGGAAGGGAAACTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 72 bp | ACTATAAGTTCAGTCACTTCTCTGCTGAAAGGACTCTaGAAAGAATCTTTGACTCATCCCTCAACTTTACCA | + |
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Preference number: 3 (lower is better) Translates to: TISSVTSLLKGL*KESLTHPSTLP Trigger: TGGTAAAGTTGAGGGATGAGTCAAAGATTCTTTTCAGAGTCCTTTCAGCAGAGAAGTGACTGAACTTATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR TCA 72 bp | TCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTaGACCAGAGAATTTCTATTCTCAACGATTTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: SGLVNTVISRRD*TREFLFSTIFK Trigger: CTTGAAAATCGTTGAGAATAGAAATTCTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR CCA 90 bp | TCTTATTCTCTCCACTTTGACCTGTTGAGCTCTCTGTGTTGCCGCCACCTATGGCCCCTGCAGAGGCAATaGCCAGCACTGTGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SYSLHFDLLSSLCCRHLWPLQRQ*PALCGG Trigger: TCCTCCGCACAGTGCTGGCCATTGCCTCTGCAGGGG...CCATAGGTGGCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAGAGAATAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGCCACACGGGGCCCAGTaGGCACAGATGCATAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AIVLVLSTQSFQGETEPEPHGAQ*AQMHSA Trigger: TGCGCTATGCATCTGTGCTCACTGGGCCCCGTGTGG...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR GCA 90 bp | TGTGTAGGGGTGGGTCCTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATTGCATACCCAGCACCGTaGCTATCAATGCCACACGGG | + |
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Preference number: 4 (lower is better) Translates to: CVGVGPLGNSSFQVNSPIAYPAP*LSMPHG Trigger: CCCGTGTGGCATTGATAGGCACGGTGCTGGGTATGC...AATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAGGACCCACCCCTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR CCA 90 bp | TCTTATTCTCTCCACTTTGACCTGTTGAGCTCTCTGTGTTGCCGCCACCTATGGAGCCCATTCCAGACCTaGGAAGCCGGTGAGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SYSLHFDLLSSLCCRHLWSPFQT*EAGEQK Trigger: TTTTTGCTCACCGGCTTCCCAGGTCTGGAATGGGCT...CCATAGGTGGCGGCAACACAGAGAGCTCAACAGGTCAAAGTGGAGAGAATAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTGATGTGCACCAGGGGTaGGGTGTGCTGTCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: YWTAYKGAMQANRSTACIDVHQG*GVLSKS Trigger: AGATTTGGACAGCACACCTCACCCCTGGTGCACATC...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | GCCTCCACTGTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTTGTATGTACCAGTGAAATCACCTTaGCAATGGCCCTGCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: ASTVSPQLLGEGMSFLYVPVKSP*QWPCGS Trigger: AGATCCGCAGGGCCATTGTCAAGGTGATTTCACTGG...TACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTGCACTGCTGATTCCATaGAGGAGAAAGAGTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YWTAYKGAMQANRSTACIALLIP*RRKSGG Trigger: TCCTCCACTCTTTCTCCTTCATGGAATCAGCAGTGC...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | GCTATTGTTCTGGTCTTGTCAACACAGTCATTTCAAGGAGAGACTGAACCAGAGCGTAGGAGAGCAGGATaGAGAGGACATCTGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: AIVLVLSTQSFQGETEPERRRAG*RGHLNP Trigger: TGGGTTCAGATGTCCTCTTCATCCTGCTCTCCTACG...CTCTGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR GCA 90 bp | CACGTGTGTGCATACATTGTGAAAACTACTCAGCTTATACCTAAGAATTATGCCCTTGAGCCTCTCCCCTaGAGAGGCAATGGCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: HVCAYIVKTTQLIPKNYALEPLP*RGNGQH Trigger: GTGCTGGCCATTGCCTCTGCAGGGGAGAGGCTCAAG...GGCATAATTCTTAGGTATAAGCTGAGTAGTTTTCACAATGTATGCACACACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR GCA 90 bp | CTATTGGAAACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTGCTAAAAGAGTGGAGGAAGTaGTGCTGGAGCACACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLETTWLLSERKSVICLLKEWRK*CWSTQG Trigger: GCCCTGTGTGCTCCAGCAGCACTTCCTCCACTCTTT...TAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR GCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTAAAGCACAGACACTGTaGCCATTAGGATGTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: YWTAYKGAMQANRSTACIKAQTL*PLGCAP Trigger: TGGTGCACATCCTAATGGGCACAGTGTCTGTGCTTT...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | ATGCCTCTTTCCGCCTCCACTGTTAGCCCGCAGTTGTaGGGAGAAGGGATGTCATTTTTGTATGTAGTATTG | + |
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Preference number: 4 (lower is better) Translates to: MPLSASTVSPQL*GEGMSFLYVVL Trigger: CAATACTACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAACAGTGGAGGCGGAAAGAGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR TCA 90 bp | TACTGGACAGCTTATAAAGGGGCAATGCAGGCAAACAGAAGCACAGCCTGTATTCATAAATATGGGCAGTaGAATCCAATGATGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YWTAYKGAMQANRSTACIHKYGQ*NPMMSP Trigger: TGGGCTCATCATTGGATTTCACTGCCCATATTTATG...AATACAGGCTGTGCTTCTGTTTGCCTGCATTGCCCCTTTATAAGCTGTCCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR GCA 90 bp | CTATTGGAAACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTTGCCTGCTATGCTGTCCAAATCTGTaGACAATGGACAGGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLETTWLLSERKSVICLLCCPNL*TMDRPR Trigger: TCTGGGCCTGTCCATTGTGCACAGATTTGGACAGCA...TAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTTTCCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | GTTAGCCCGCAGTTGTTGGGAGAAGGGATGTCATTTTaGTATGTAGTATTGCTGCTCATAAGTTTCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSPQLLGEGMSF*YVVLLLISFPS Trigger: GGAAGGGAAACTTATGAGCAGCAATACTACATACAAAAATGACATCCCTTCTCCCAACAACTGCGGGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGTTGTGCAAAAACAGTCACTTATACATTTCAGAAGTCAGCGTATACATAAGTACAGCCAGGATGTaGGAGACGCACGTGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QRLCKNSHLYISEVSVYISTARM*ETHVLR Trigger: CCTCAACACGTGCGTCTCCCACATCCTGGCTGTACT...TATGTATACGCTGACTTCTGAAATGTATAAGTGACTGTTTTTGCACAACCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGTTGTGCAAAAACAGTCACTTATACATTTCAGAAGTCAGCGTATACATACAAATCTGTGCACAATaGACAGGCCCAGAACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QRLCKNSHLYISEVSVYIQICAQ*TGPEQE Trigger: TTCCTGTTCTGGGCCTGTCCATTGTGCACAGATTTG...TATGTATACGCTGACTTCTGAAATGTATAAGTGACTGTTTTTGCACAACCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGTTGTGCAAAAACAGTCACTTATACATTTCAGAAGTCAGCGTATACATAAGGGTTCATCACGGGTaGAAAAAGCACAGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: QRLCKNSHLYISEVSVYIRVHHG*KKHRHC Trigger: ACAGTGTCTGTGCTTTTTCCACCCGTGATGAACCCT...TATGTATACGCTGACTTCTGAAATGTATAAGTGACTGTTTTTGCACAACCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | TTGTTGGGAGAAGGGATGTCATTTTTGTATGTAGTATaGCTGCTCATAAGTTTCCCTTCCATGTCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LLGEGMSFLYVV*LLISFPSMSGT Trigger: TGTTCCTGACATGGAAGGGAAACTTATGAGCAGCAATACTACATACAAAAATGACATCCCTTCTCCCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | GTTAACAGTCCTATTGATGTTGCTATTGTTCTGGTCTaGTCAACACAGTCATTTCAAGGAGAGACTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: VNSPIDVAIVLV*STQSFQGETEP Trigger: TGGTTCAGTCTCTCCTTGAAATGACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | CTCTTGGAAATTCCTCTTTCCAGGTTAACAGTCCTATaGATGTTGCTATTGTTCTGGTCTTGTCAACACAGT | + |
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Preference number: 4 (lower is better) Translates to: LLEIPLSRLTVL*MLLLFWSCQHS Trigger: ACTGTGTTGACAAGACCAGAACAATAGCAACATCAATAGGACTGTTAACCTGGAAAGAGGAATTTCCAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| 3UTR CAA 72 bp | AACCACTTGGTTATTGTCAGAGAGGAAATCTGTCATTaGCCTGCTACTATAAATAGACAATATTCTACCCAA | + |
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Preference number: 4 (lower is better) Translates to: NHLVIVREEICH*PATINRQYSTQ Trigger: TTGGGTAGAATATTGTCTATTTATAGTAGCAGGCAAATGACAGATTTCCTCTCTGACAATAACCAAGTGGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS GCA 90 bp | GGCTGTAATAGCTGCACTCCGCATACCCAGCACCGTGCCTATCAATaGCACACGGGGCCCAGTGAGCACAGATGCATAGCGCAGCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GCNSCTPHTQHRAYQ*HTGPSEHRCIAQRE Trigger: TTCCCGCTGCGCTATGCATCTGTGCTCACTGGGCCCCGTGTGGCATTGATAGGCACGGTGCTGGGTATGCGGAGTGCAGCTATTACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS GCA 90 bp | TTCATCACGGGTGGAAAAAGCACAGACACTGTGCCCATTAGGATGTaGACCAGGGGTGAGGTGTGCTGTCCAAATCTGTGCACAATGGAC | + |
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Preference number: 5 (lower is better) Translates to: FITGGKSTDTVPIRM*TRGEVCCPNLCTMD Trigger: GTCCATTGTGCACAGATTTGGACAGCACACCTCACCCCTGGTGCACATCCTAATGGGCACAGTGTCTGTGCTTTTTCCACCCGTGATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS-3UTR CAA 90 bp | CACGTGTGTGCATACATTGTGAAAACTACTCAGCTTATACCTAAGAATTATGCCGGCCCTGCGGATCTGTaGGGTCTTGATGCTGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: HVCAYIVKTTQLIPKNYAGPADL*GLDAVD Trigger: ATCTACAGCATCAAGACCCAACAGATCCGCAGGGCC...GGCATAATTCTTAGGTATAAGCTGAGTAGTTTTCACAATGTATGCACACACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214711.2 |
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| CDS GCA 72 bp | GCTGATTCCATGAAGGAGAAAGAGTGGAGGAAGTGCTaGTGGAGCACACAGGGCACCAGACCCACCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: ADSMKEKEWRKC*WSTQGTRPTIR Trigger: CCGGATGGTGGGTCTGGTGCCCTGTGTGCTCCAGCAGCACTTCCTCCACTCTTTCTCCTTCATGGAATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS GCA 72 bp | ACCATAACACCCCCAGCACAGAAGGCAGCGTTGACATaGATAAGCCCAGGTCTGTCACGGCCAAGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TITPPAQKAALT*ISPGLSRPRWP Trigger: TGGCCATCTTGGCCGTGACAGACCTGGGCTTATGCATGTCAACGCTGCCTTCTGTGCTGGGGGTGTTATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS GCA 72 bp | CAGGGTTCATCACGGGTGGAAAAAGCACAGACACTGTaGCCATTAGGATGTGCACCAGGGGTGAGGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGSSRVEKAQTL*PLGCAPGVRCA Trigger: AGCACACCTCACCCCTGGTGCACATCCTAATGGGCACAGTGTCTGTGCTTTTTCCACCCGTGATGAACCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS GCA 72 bp | GGTGGAAAAAGCACAGACACTGTGCCCATTAGGATGTaGACCAGGGGTGAGGTGTGCTGTCCAAATCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GGKSTDTVPIRM*TRGEVCCPNLC Trigger: GCACAGATTTGGACAGCACACCTCACCCCTGGTGCACATCCTAATGGGCACAGTGTCTGTGCTTTTTCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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| CDS TCA 72 bp | CATGATGGCTACAAAATACCCCATAAATATGGGCAGTaGAATCCAATGATGAGCCCATTCCAGACCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HDGYKIPHKYGQ*NPMMSPFQTWE Trigger: TTCCCAGGTCTGGAATGGGCTCATCATTGGATTTCACTGCCCATATTTATGGGGTATTTTGTAGCCATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098189.4 ENSMUST00000214711.2 |
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