Pregenerated sensors for OLFR624 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045780Ensembl transcript IDs: ENSMUST00000062144.4
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAATGGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTaGTCAACTCCTTCATGCCTTCAAAACCAGTACCACCTGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: QWPPMASHSAKPPLL*STPSCLQNQYHLGD Trigger: GTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TTCAGTCCTGGCCATCAATTGCAACTGAGGCTGCACTTTCACCAATaGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: FSPGHQLQLRLHFHQ*PPMASHSAKPPLLC Trigger: GCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCCATTGGTGAAAGTGCAGCCTCAGTTGCAATTGATGGCCAGGACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | TTCACCAATGGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTaGTCTGCTCAACTCCTTCATGCCTTCAAAACCAGTACCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: FTNGLPWPLTVPSLR*SAQLLHAFKTSTTW Trigger: CCAGGTGGTACTGGTTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCCATTGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | GTAGCACACGCGTCATCCTCTAGGCTCCAGATGCCTGTACTCCACTaGTGCTGCTGCTCTTGGTGGTCATCTCATGGTACTGGCATCTCC | + |
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Preference number: 1 (lower is better) Translates to: VAHASSSRLQMPVLH*CCCSWWSSHGTGIS Trigger: GGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGATGACGCGTGTGCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | ACTGAGGCTGCACTTTCACCAATGGCCTCCCATGGCCTCTCACAGTaGCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCCTTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TEAALSPMASHGLSQ*QASAALLNSFMPSK Trigger: TTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCCATTGGTGAAAGTGCAGCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR TCA 90 bp | CCAAAACACTGCATGACCCCTTCAGTCCTGGCCATCAATTGCAACTaGGGCTGCACTTTCACCAATGGCCTCCCATGGCCTCTCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: PKHCMTPSVLAINCN*GCTFTNGLPWPLTV Trigger: CACTGTGAGAGGCCATGGGAGGCCATTGGTGAAAGTGCAGCCTCAGTTGCAATTGATGGCCAGGACTGAAGGGGTCATGCAGTGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCTCTTGGTaGTCATCTCATGGTACTGGCATCTCCAAAACACTGCATGACCCC | + |
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Preference number: 1 (lower is better) Translates to: SRLQMPVLHCCCCSW*SSHGTGISKTLHDP Trigger: GGGGTCATGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCTCTTaGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTGCATGAC | + |
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Preference number: 1 (lower is better) Translates to: SSRLQMPVLHCCCCS*WSSHGTGISKTLHD Trigger: GTCATGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | GGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTaGTCTCTTATAGAACTCAAGACTACCAGCCCAGAGATGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GGMFFTGLLHLACSA*SLIELKTTSPEMVP Trigger: TGGGACCATCTCTGGGCTGGTAGTCTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | GGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTTGCTCAGCCTaGTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GGMFFTGFLHLACSA*SLIEPKTTSPEMVP Trigger: TGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | AGAAGCCATGGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RSHGGMFFTGFLHLA*SACSLIEPKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCCATGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | CTGGAACTCAAGCAGGTCAGAAAGCAAGAACTGATGCAGAAGCCATaGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LELKQVRKQELMQKP*RDVLYWLSSPGLLS Trigger: GCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCTGACCTGCTTGAGTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR TCA 90 bp | AAAGGAAGTCAGGCCTGGAACTCAAGCAGGTCAGAAAGCAAGAACTaGTGCAGAAGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: KGSQAWNSSRSESKN*CRSHGGMFFTGLLH Trigger: GTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCTGACCTGCTTGAGTTCCAGGCCTGACTTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR TCA 90 bp | AAAGGAAGTCAGGCCTGGAACTCAAGCAGGTCAGAAAGCAAGAACTaGTGCAGAAGCCATGGAGGGATGTTCTTTACTGGCTTTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: KGSQAWNSSRSESKN*CRSHGGMFFTGFLH Trigger: GTGAAGAAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCTGACCTGCTTGAGTTCCAGGCCTGACTTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | AAGTTGGGGAGGAAAGGATTTATTCAGCTTACACTTCCATACTGCTaGTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KLGRKGFIQLTLPYC*SSPKEVRPGTQAGQ Trigger: CTGACCTGCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | AGCAAGTTGGGGAGGAAAGGATTTATTCAGCTTACACTTCCATACTaGTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SKLGRKGFIQLTLPY*CSSPKEVRPGTQAG Trigger: ACCTGCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAACTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | AGAAAGCAAGAACTGATGCAGAAGCCATGGAGGGATGTTCTTTACTaGCTTGCTTCACCTGGCTTGCTCAGCCTGCTCTCTTATAGAACT | + |
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Preference number: 1 (lower is better) Translates to: RKQELMQKPWRDVLY*LASPGLLSLLSYRT Trigger: AGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | AGTACCAAGTCCAGCCACAGCACAATGTACAACTTTGGCTATATCTaGAACACAGCCACTGTGCTCTCAGAAAACACTTCCCAGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: STKSSHSTMYNFGYI*NTATVLSENTSQKM Trigger: CATCTTCTGGGAAGTGTTTTCTGAGAGCACAGTGGCTGTGTTCCAGATATAGCCAAAGTTGTACATTGTGCTGTGGCTGGACTTGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TGTATGAGGATGTTTTCTTACATCTCTAAAAATGTGCCTCGTACATaGATGGTGCCCATAGAGGCCAGGGTATACCATTGGATACGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CMRMFSYISKNVPRT*MVPIEARVYHWIRW Trigger: CCAGCGTATCCAATGGTATACCCTGGCCTCTATGGGCACCATCCATGTACGAGGCACATTTTTAGAGATGTAAGAAAACATCCTCATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | AAAGTGCCCAAAGAAAAGCTCACTAGATCAACCTCACCTAATACTTaGGGCTGGGCAGTGTGCAGAGCTGAAGAAAATGGTTTACTTTCA | + |
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Preference number: 1 (lower is better) Translates to: KVPKEKLTRSTSPNT*GWAVCRAEENGLLS Trigger: TGAAAGTAAACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGGTGAGGTTGATCTAGTGAGCTTTTCTTTGGGCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR GCA 90 bp | AAGCTCACTAGATCAACCTCACCTAATACTTGGGGCTGGGCAGTGTaGAGAGCTGAAGAAAATGGTTTACTTTCATATTTCCTCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: KLTRSTSPNTWGWAV*RAEENGLLSYFLRD Trigger: ATCTCTGAGGAAATATGAAAGTAAACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGGTGAGGTTGATCTAGTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTaGGGAGGAAAGGATTTATTCAGCTTACACTTCCATACTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SGFLFLHKHHDQEAS*GGKDLFSLHFHTAA Trigger: AGCAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CCA 90 bp | TCAGGGTTTCTATTCCTGCAAAAACATCATGTCCAAGAAGCAAGTTaGGGAGGAAAGGATTTATTCAGCTTACACTTCCATACTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SGFLFLQKHHVQEAS*GGKDLFSLHFHTAA Trigger: AGCAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAACTTGCTTCTTGGACATGATGTTTTTGCAGGAATAGAAACCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR TCA 90 bp | CTAACCAGAACTACAGAATCTTCACAATCAAAACAGGAATGGCCCTaGAAAGAGTCTTTAATTTTCCCTCTGAAATTTCACACACCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LTRTTESSQSKQEWP*KESLIFPLKFHTPE Trigger: CTCTGGTGTGTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCCATTCCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR TCA 90 bp | TCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTaGCACAAAACTAGCCAGTACAATAAACTAAAGACATTTTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: STEAPFSVITPAVSS*HKTSQYNKLKTFSN Trigger: GTTTGAAAATGTCTTTAGTTTATTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR TCA 90 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCTGCTCAGAGCACAGATaGTCCTGGATCTCCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: PMASHSAKPPLLCSTPSCCSEHR*SWISNP Trigger: GGGGTTGGAGATCCAGGATCATCTGTGCTCTGAGCA...GCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCGCCAGGGTATACCATTaGATACGCTGGACCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PMASHSAKPPLLCSTPSCARVYH*IRWTWG Trigger: ACCCCAGGTCCAGCGTATCCAATGGTATACCCTGGC...GCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTTTGCTTCACCTGGCTTaGTCAGCCTGCTCTCTTATA | + |
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Preference number: 2 (lower is better) Translates to: GLPWPLTVPSLRCSAQLLLLHLA*SACSLI Trigger: TATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAA...AAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTACACTTCCATACTGCTaGTCATCACCAAAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: GLPWPLTVPSLRCSAQLLTLPYC*SSPKEV Trigger: GACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGT...AAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CAA 90 bp | GGCATCTCCAAAACACTGCATGACCCCTTCAGTCCTGGCCATCAATaGCAACTGAGGCTGCACTTTCACCAATGGCCTCCCATGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GISKTLHDPFSPGHQ*QLRLHFHQWPPMAS Trigger: AGAGGCCATGGGAGGCCATTGGTGAAAGTGCAGCCTCAGTTGCAATTGATGGCCAGGACTGAAGGGGTCATGCAGTGTTTTGGAGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTGACCAAGAAGCAAGTTaGGGAGGAAAGGATTTATTC | + |
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Preference number: 2 (lower is better) Translates to: GLPWPLTVPSLRCSAQLLDQEAS*GGKDLF Trigger: GAATAAATCCTTTCCTCCCCAACTTGCTTCTTGGTC...AAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTGGAATACCCCACTTCTaGTACCAATTTGTCTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: GLPWPLTVPSLRCSAQLLGIPHF*YQFVLV Trigger: GACTAAGACAAATTGGTACCAGAAGTGGGGTATTCC...AAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCCTTACACTTCCATACTaGTGCTCATCACCAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PMASHSAKPPLLCSTPSCLTLPY*CSSPKE Trigger: TTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTAAG...GCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCAGGTCAGAAAGCAAGACTGGCTTGCTTCACCTaGCTTGCTCAGCCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CSSPKEVRPGTQAGQKARLACFT*LAQPAL Trigger: GAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAG...TCTTGCTTTCTGACCTGCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CAA 90 bp | CAGAAGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTaGCTCAGCCTGCTCTCTTATAGAACTCAAGACTACCAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QKPWRDVLYWLASPG*LSLLSYRTQDYQPR Trigger: TCTGGGCTGGTAGTCTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CAA 90 bp | CAGAAGCCATGGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QKPWRDVLYWLSSPG*LSLLSYRTQDYQPR Trigger: TCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCCATGGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | TCGTACATGGATGGTGCCCATAGAGGCCAGGGTATACCATTGGATACGCTGGACAACTGCCTTCTACTTTaGAGCCATCTCTCTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SYMDGAHRGQGIPLDTLDNCLLL*SHLSVL Trigger: GAGAACAGAGAGATGGCTCCAAAGTAGAAGGCAGTT...GTCCAGCGTATCCAATGGTATACCCTGGCCTCTATGGGCACCATCCATGTACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAACATGGCCTCTCACAGTaGCAAGCCTCCGCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQHGLSQ*QASAAL Trigger: CAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATG...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTGTTTACACTTATGTGGTaGTTCACAATGTCAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: KPWRDVLYWLASPGLLSLFTLMW*FTMSNH Trigger: GTGGTTTGACATTGTGAAGCACCACATAAGTGTAAA...CAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCTTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATTGGGGCTGGGCAGTGTaGAGAGCTGAAGAAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: SLLTVGSTKTVSSFKRENWGWAV*RAEENG Trigger: ACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCA...ATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAAGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAAGTACTCCACTGCTGCTaGTGCTCTTGGTGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQVLHCC*CSWWSS Trigger: AGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTAC...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CAA 90 bp | ATGTCAAACCACAGGATAGAAATGAGGGAGCTGGTGGTCAGGGGCTaGAGATCATTAGAGTTAATGAACCAAAATCACCAGCTTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: MSNHRIEMRELVVRG*RSLELMNQNHQLKR Trigger: CCTCTTAAGCTGGTGATTTTGGTTCATTAACTCTAATGATCTCAAGCCCCTGACCACCAGCTCCCTCATTTCTATCCTGTGGTTTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | GATCTTCTAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCCCAAAACATGGTAAAATGCCTTACAGTTaGATCTCATGGAGGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: DLLAQSSKVLPQSSPKHGKMPYS*ISWRHF Trigger: GAAATGCCTCCATGAGATCCAACTGTAAGGCATTTT...ACCATGTTTTGGGGAGGACTGTGGAAGGACTTTGGAACTTTGGGCTAGAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | TTAGATAAATGTCTTAGTCAGGGTTTCTATTCCTGCAAAAACATCATGTCCAAGCCTGTACTCCACTGCTaGTGCTGCTCTTGGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LDKCLSQGFYSCKNIMSKPVLHC*CCSWWS Trigger: TGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGG...CTTGGACATGATGTTTTTGCAGGAATAGAAACCCTGACTAAGACATTTATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCTTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATAGGGATGTTCTTTACTaGCTTGCTTCACCTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLTVGSTKTVSSFKRENRDVLY*LASPGL Trigger: CAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCT...ATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAAGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR CCA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAAGTCCTCCCCAAAACATaGTCAGGTTGCACAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQVLPKT*SGCTGI Trigger: TATTCCTGTGCAACCTGACCATGTTTTGGGGAGGAC...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCTCTTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATTCCTCCCCATTACTTTaGATCTTCCCTACCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLLTVGSTKTVSSFKRENSSPLL*IFPTIQ Trigger: TTGGATGGTAGGGAAGATGCAAAGTAATGGGGAGGA...ATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAAGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATATCAGGTATCTTGATTACTCTTaGCACTTCCTCTCCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LTVGSTKTVSSFKRENIRYLDYS*HFLSSS Trigger: GGAGGAGGAGAGGAAGTGGCAAGAGTAATCAAGATA...CCTGATATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGATGTCACCTCAATGATGCTGGTCTCTTCTTAATCACCGCTAATTTCTTACTGGCTTGCTCAGCCTaGTCTCTTATAGAACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRCHLNDAGLFLITANFLLACSA*SLIELK Trigger: CTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAG...TAAGAAATTAGCGGTGATTAAGAAGAGACCAGCATCATTGAGGTGACATCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CCA 90 bp | TTAGATAAATGTCTTAGTCAGGGTTTCTATTCCTGCAAAAACATCATGTCCAAGCCTAATACTTGGGGCTaGGCAGTGTGCAGAGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LDKCLSQGFYSCKNIMSKPNTWG*AVCRAE Trigger: TTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGG...CTTGGACATGATGTTTTTGCAGGAATAGAAACCCTGACTAAGACATTTATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGATGTCACCTCAATGATGCTGGTCTCTTCTTAATCACCGCTAATTTCTTAGGCAGTGTGCAGAGCTaGAGAAAATGGTTTACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RRCHLNDAGLFLITANFLGSVQS*RKWFTF Trigger: GAAAGTAAACCATTTTCTTCAGCTCTGCACACTGCC...TAAGAAATTAGCGGTGATTAAGAAGAGACCAGCATCATTGAGGTGACATCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR GCA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAAAAGCAGAAGTCAAAGTaGCCAAAGAAAAGCTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQKQKSK*PKKSSL Trigger: TAGTGAGCTTTTCTTTGGGCACTTTGACTTCTGCTT...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGATGTCACCTCAATGATGCTGGTCTCTTCTTAATCACCGCTAATTTCTTAACAGATAATCTATCTTaGTTACTCTTGCCACTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RRCHLNDAGLFLITANFLTDNLS*LLLPLP Trigger: AGGAAGTGGCAAGAGTAATCAAGATAGATTATCTGT...TAAGAAATTAGCGGTGATTAAGAAGAGACCAGCATCATTGAGGTGACATCTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GGCCTCCCATGGCCTCTCACAGTGCCAAGCCTCCGCTaGTCTGCTCAACTCCTTCATGCCTTCAAAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLPWPLTVPSLR*SAQLLHAFKTS Trigger: ACTGGTTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GCACTTTCACCAATGGCCTCCCATGGCCTCTCACAGTaGCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: ALSPMASHGLSQ*QASAALLNSFM Trigger: CATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGGAGGCCATTGGTGAAAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTaGTCAACTCCTTCATGCCTTCAAAACCAGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PMASHSAKPPLL*STPSCLQNQYH Trigger: GTGGTACTGGTTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | AACCGTCCAATGTCTGGGATCCAACTCACGATCTTCTaGGCTCCTCCAAGGGCTTGGGTCACTTCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NRPMSGIQLTIF*APPRAWVTSPA Trigger: GGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACATTGGACGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | TGCATGACCCCTTCAGTCCTGGCCATCAATTGCAACTaGGGCTGCACTTTCACCAATGGCCTCCCATGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CMTPSVLAINCN*GCTFTNGLPWP Trigger: AGGCCATGGGAGGCCATTGGTGAAAGTGCAGCCTCAGTTGCAATTGATGGCCAGGACTGAAGGGGTCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | AGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATaGCTTCAAAACCAGTACCACCTGGGTGACCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SAKPPLLCSTPS*LQNQYHLGDPY Trigger: GTAAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | TCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTaGTGCTCTTGGTGGTCATCTCATGGTACTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSRLQMPVLHCC*CSWWSSHGTGI Trigger: GATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | TCATCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTaGTGCTGCTCTTGGTGGTCATCTCATGGTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSRLQMPVLHC*CCSWWSSHGTG Trigger: GCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGATGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GCGTCATCCTCTAGGCTCCAGATGCCTGTACTCCACTaGTGCTGCTGCTCTTGGTGGTCATCTCATGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: ASSSRLQMPVLH*CCCSWWSSHGT Trigger: AGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGCCTAGAGGATGACGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | ATCCAACTCACGATCTTCTGGGCTCCTCCAAGGGCTTaGGTCACTTCTCCAGCCATGCCCTTTGTAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: IQLTIFWAPPRA*VTSPAMPFVAH Trigger: GTGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTGAGTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | GAACTGATGCAGAAGCCATGGAGGGATGTTCTTTACTaGCTTGCTTCACCTGGCTTGCTCAGCCTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQKPWRDVLY*LASPGLLSLLS Trigger: AGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | GCTCAACTCCTTCATGCCTTCAAAACCAGTACCACCTaGGTGACCCTTACACAGTACCAAGTCCAGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: AQLLHAFKTSTT*VTLTQYQVQPQ Trigger: CTGTGGCTGGACTTGGTACTGTGTAAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGAGTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | CTCCAGATGCCTGTACTCCACTGCTGCTGCTGCTCTTaGTGGTCATCTCATGGTACTGGCATCTCCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LQMPVLHCCCCS*WSSHGTGISKT Trigger: TGTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCTTAAGTTTCAGTTCTTaGCAGTCCTCTTCTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PMASHSAKPPLLCSTPSCLSFSS*QSSSES Trigger: ACTCTCAGAAGAGGACTGCAAAGAACTGAAACTTAA...GCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CAA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCGGGTCGGGATTGGTATaGATGCTCAGAGCACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: YTSILLLITKGSQAWNSSGSGLV*MLRAQM Trigger: CATCTGTGCTCTGAGCATCAATACCAATCCCGACCC...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | GGCCAGGGTATACCATTGGATACGCTGGACCTGGGGTaGAAAGATGTGAGGCATTGTGTCAGTGCTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GQGIPLDTLDLG*KDVRHCVSARK Trigger: TTTCCTAGCACTGACACAATGCCTCACATCTTTTCACCCCAGGTCCAGCGTATCCAATGGTATACCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | CAGGCCTGGAACTCAAGCAGGTCAGAAAGCAAGAACTaGTGCAGAAGCCATGGAGGGATGTTCTTTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QAWNSSRSESKN*CRSHGGMFFTG Trigger: GCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCTGACCTGCTTGAGTTCCAGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | AACTCCTTCATGCCTTCAAAACCAGTACCACCTGGGTaGCCCTTACACAGTACCAAGTCCAGCCACAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: NSFMPSKPVPPG*PLHSTKSSHST Trigger: TGTGCTGTGGCTGGACTTGGTACTGTGTAAGGGTCACCCAGGTGGTACTGGTTTTGAAGGCATGAAGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTaGATGACCCCTTCAGTCCTGGCCATCAATTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGHLMVLASPKH*MTPSVLAINCN Trigger: GTTGCAATTGATGGCCAGGACTGAAGGGGTCATGCAGTGTTTTGGAGATGCCAGTACCATGAGATGACCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | GAACTGATGCAGAAGCCATGGAGGGATGTTCTTTACTaGCTTTCTTCACCTGGCTTGCTCAGCCTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQKPWRDVLY*LSSPGLLSLLS Trigger: AGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | TTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTaGTCTCTTATAGAACTCAAGACTACCAGCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FFTGLLHLACSA*SLIELKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTaGTCAGCCTGCTCTCTTATAGAACTCAAGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: GGMFFTGLLHLA*SACSLIELKTT Trigger: GGTAGTCTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTTaGTCAGCCTGCTCTCTTATAGAACCCAAGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: GGMFFTGFLHLA*SACSLIEPKTT Trigger: GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | AAGCAGGTCAGAAAGCAAGAACTGATGCAGAAGCCATaGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQVRKQELMQKP*RDVLYWLASPG Trigger: GCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTTCTGCATCAGTTCTTGCTTTCTGACCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCAGGTCAGAAAGCAAGACTGGTGGTCAGGGGCTaGAGATCATTAGAGTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: CSSPKEVRPGTQAGQKARLVVRG*RSLELM Trigger: CATTAACTCTAATGATCTCAAGCCCCTGACCACCAG...TCTTGCTTTCTGACCTGCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | TACCATTGGATACGCTGGACCTGGGGTGAAAAGATGTaGGGCATTGTGTCAGTGCTAGGAAACAAACCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: YHWIRWTWGEKM*GIVSVLGNKPR Trigger: CCTAGGTTTGTTTCCTAGCACTGACACAATGCCTCACATCTTTTCACCCCAGGTCCAGCGTATCCAATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | TCAAAAGCAAAAGTCAATCTCCAACCGTCCAATGTCTaGGATCCAACTCACGATCTTCTGGGCTCCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKAKVNLQPSNV*DPTHDLLGSSK Trigger: CTTGGAGGAGCCCAGAAGATCGTGAGTTGGATCCCAGACATTGGACGGTTGGAGATTGACTTTTGCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | GGGAGGAAAGGATTTATTCAGCTTACACTTCCATACTaGTGCTCATCACCAAAGGAAGTCAGGCCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GRKGFIQLTLPY*CSSPKEVRPGT Trigger: AGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTAAGCTGAATAAATCCTTTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | AAGCTCACTAGATCAACCTCACCTAATACTTGGGGCTaGGCAGTGTGCAGAGCTGAAGAAAATGGTTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: KLTRSTSPNTWG*AVCRAEENGLL Trigger: AAGTAAACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGGTGAGGTTGATCTAGTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | AAAGAAAAGCTCACTAGATCAACCTCACCTAATACTTaGGGCTGGGCAGTGTGCAGAGCTGAAGAAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: KEKLTRSTSPNT*GWAVCRAEENG Trigger: ACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGGTGAGGTTGATCTAGTGAGCTTTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | CGGCACGCAATGTGTCTTTCAAAGGTCACCACAACATaGATTCCATCTAACAAGGGTGAATCACAGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RHAMCLSKVTTT*IPSNKGESQLL Trigger: CAACAACTGTGATTCACCCTTGTTAGATGGAATTCATGTTGTGGTGACCTTTGAAAGACACATTGCGTGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | CTGGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGCAAGTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LVPICLSQGFYS*TNIMTKKQVGE Trigger: CTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAAATTGGTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | AGATCAACCTCACCTAATACTTGGGGCTGGGCAGTGTaGAGAGCTGAAGAAAATGGTTTACTTTCATATTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSTSPNTWGWAV*RAEENGLLSYF Trigger: GAAATATGAAAGTAAACCATTTTCTTCAGCTCTGCACACTGCCCAGCCCCAAGTATTAGGTGAGGTTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CCA 72 bp | AAAACATGGTCAGGTTGCACAGGAATACCCCACTTCTaGTACCAATTTGTCTTAGTCAGGGTTTCTATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KTWSGCTGIPHF*YQFVLVRVSIP Trigger: AGGAATAGAAACCCTGACTAAGACAAATTGGTACCAGAAGTGGGGTATTCCTGTGCAACCTGACCATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | CATTACTTTGCATCTTCCCTACCATCCAAATACACCTaGTCTCGGTCTCTCATTAGAAATCAATCAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HYFASSLPSKYT*SRSLIRNQSGF Trigger: GAAACCTGATTGATTTCTAATGAGAGACCGAGAGCAGGTGTATTTGGATGGTAGGGAAGATGCAAAGTAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CAA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAACTTCCAGTGAACTCATaGGGTATAACTAATCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQLPVNS*GITNPI Trigger: GATGGGATTAGTTATACCCAATGAGTTCACTGGAAG...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR GCA 72 bp | AGGTTAGATAAATGTCTTAGTCAGGGTTTCTATTCCTaGAAAAACATCATGTCCAAGAAGCAAGTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLDKCLSQGFYS*KNIMSKKQVGE Trigger: CTCCCCAACTTGCTTCTTGGACATGATGTTTTTGCAGGAATAGAAACCCTGACTAAGACATTTATCTAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCTTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATACTTCTTTAGTATTGTaGAGTAGAGTGTTGCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLTVGSTKTVSSFKRENTSLVL*SRVLLA Trigger: TGCAAGCAACACTCTACTCAACAATACTAAAGAAGT...ATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAAGAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR TCA 72 bp | ACTACAGAATCTTCACAATCAAAACAGGAATGGCCCTaGAAAGAGTCTTTAATTTTCCCTCTGAAATTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTESSQSKQEWP*KESLIFPLKFH Trigger: GTGAAATTTCAGAGGGAAAATTAAAGACTCTTTTCAGGGCCATTCCTGTTTTGATTGTGAAGATTCTGTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR TCA 90 bp | CCCATGGCCTCTCACAGTGCCAAGCCTCCGCTGCTCTGCTCAACTCCTTCATGCTATAAATGTTGCCCATaGGGACCTGAACCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PMASHSAKPPLLCSTPSCYKCCP*GPEPEE Trigger: CTCCTCTGGTTCAGGTCCTCATGGGCAACATTTATA...GCATGAAGGAGTTGAGCAGAGCAGCGGAGGCTTGGCACTGTGAGAGGCCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | GATCCAACTCACGATCTTCTGGGCTCCTCCAAGGGCTaGGGTCACTTCTCCAGCCATGCCCTTTGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPTHDLLGSSKG*GHFSSHALCST Trigger: TGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAGCCCAGAAGATCGTGAGTTGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | GCTCCAGATGCCTGTACTCCACTGCTGCTGCTGCTCTaGGTGGTCATCTCATGGTACTGGCATCTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: APDACTPLLLLL*VVISWYWHLQN Trigger: GTTTTGGAGATGCCAGTACCATGAGATGACCACCAAGAGCAGCAGCAGCAGTGGAGTACAGGCATCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR TCA 90 bp | GATCTTCTAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCCCAAAACATGGTTTGCCCATGAGGACCTaGACCAGAGGAGAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLAQSSKVLPQSSPKHGLPMRT*TRGERC Trigger: GCATCTCTCTCCTCTGGTTCAGGTCCTCATGGGCAA...ACCATGTTTTGGGGAGGACTGTGGAAGGACTTTGGAACTTTGGGCTAGAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCACCTGGCTTGCTCAGCCTGAATAGCGTAGAGGGTTaGAAATGGCAATGTAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPWRDVLYWLASPGLLSLNSVEG*KWQCSD Trigger: ATCGCTACATTGCCATTTGCAACCCTCTACGCTATT...CAGGCTGAGCAAGCCAGGTGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | ACAGTACCAAGTCCAGCCACAGCACAATGTACAACTTaGGCTATATCTGGAACACAGCCACTGTGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVPSPATAQCTT*AISGTQPLCSQ Trigger: CTGAGAGCACAGTGGCTGTGTTCCAGATATAGCCAAAGTTGTACATTGTGCTGTGGCTGGACTTGGTACTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| 3UTR CAA 72 bp | TGGAGGGATGTTCTTTACTGGCTTTCTTCACCTGGCTaGCTCAGCCTGCTCTCTTATAGAACCCAAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLSSPG*LSLLSYRTQDY Trigger: GTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGTGAAGAAAGCCAGTAAAGAACATCCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR TCA 90 bp | TCGTACATGGATGGTGCCCATAGAGGCCAGGGTATACCATTGGATACGCTGGACTCAAGGCTGATCTCTTaGAGAAATCCCCAAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SYMDGAHRGQGIPLDTLDSRLIS*RNPQRI Trigger: AATTCTTTGGGGATTTCTTCAAGAGATCAGCCTTGA...GTCCAGCGTATCCAATGGTATACCCTGGCCTCTATGGGCACCATCCATGTACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR TCA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCAGGACAAACCATGGATaGAGTAAGACTGTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: YTSILLLITKGSQAWNSSRTNHG*SKTVQC Trigger: GCATTGCACAGTCTTACTTCATCCATGGTTTGTCCT...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR TCA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCATGTTTGCAAAGACTTaGTTCTCTCCTCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YTSILLLITKGSQAWNSSMFAKT*FSPPWM Trigger: CATCCAGGGAGGAGAGAATCAAGTCTTTGCAAACAT...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR TCA 90 bp | GATCTTCTAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCCCAAAACATGGTTGCTTCCCAAAGCGGTaGACCATAGTCAGACCAATA | + |
|
Preference number: 4 (lower is better) Translates to: DLLAQSSKVLPQSSPKHGCFPKR*TIVRPI Trigger: TATTGGTCTGACTATGGTTCACCGCTTTGGGAAGCA...ACCATGTTTTGGGGAGGACTGTGGAAGGACTTTGGAACTTTGGGCTAGAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR GCA 90 bp | AGTCTCTTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATATTCCCAGCACCGTGTaGACAGTAGACAGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTVGSTKTVSSFKRENIPSTV*TVDSPM Trigger: CATGGGGCTGTCTACTGTGCACACGGTGCTGGGAAT...ATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAAGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR GCA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCTTACATGAAGTATCATaGAGTTTCCCAGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: YTSILLLITKGSQAWNSSLHEVS*SFPGTP Trigger: TGGTGTTCCTGGGAAACTGCATGATACTTCATGTAA...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCCCAAAACATGGTAACTCCTACATAAGATaGCCACTCCGATTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLLAQSSKVLPQSSPKHGNSYIR*PLRFSG Trigger: TCCTGAAAATCGGAGTGGCCATCTTATGTAGGAGTT...ACCATGTTTTGGGGAGGACTGTGGAAGGACTTTGGAACTTTGGGCTAGAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | CACAGGATAGAAATGAGGGAGCTGGTGGTCAGGGGCTaGAGATCATTAGAGTTAATGAACCAAAATCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRIEMRELVVRG*RSLELMNQNHQ Trigger: CTGGTGATTTTGGTTCATTAACTCTAATGATCTCAAGCCCCTGACCACCAGCTCCCTCATTTCTATCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTAGCCCAAAGTTCCAAAGTCCTTCCACAGTCCTCCCCAAAACATGGTGGGGTTCATCAAGGGTaGGAAAAGGATATAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLLAQSSKVLPQSSPKHGGVHQG*EKDINV Trigger: AACATTTATATCCTTTTCCCACCCTTGATGAACCCC...ACCATGTTTTGGGGAGGACTGTGGAAGGACTTTGGAACTTTGGGCTAGAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR GCA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAACATCCAGTAACAGGGTaGAAATCACCAGAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQHPVTG*KSPETE Trigger: CTCTGTCTCTGGTGATTTGCACCCTGTTACTGGATG...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACCTGTCCATTTAAAAATTCTGTTAAACAAGAACAATGGAAAGGAGGACGAATCAAGTCTTGGTaGAGGCAGAAAGAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTCPFKNSVKQEQWKGGRIKSW*RQKEWE Trigger: CTCCCACTCTTTCTGCCTGCACCAAGACTTGATTCG...TCCTCCTTTCCATTGTTCTTGTTTAACAGAATTTTTAAATGGACAGGTGACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR CCA 90 bp | TTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATATCAGGTCAGGATTCTGTCATTaGTTAGGATGGAGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTVGSTKTVSSFKRENIRSGFCH*LGWRNS Trigger: GCTATTCCTCCATCCTAACCAATGACAGAATCCTGA...CCTGATATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | TCTATTCCTGCAAAAACATCATGTCCAAGAAGCAAGTaGGGGAGGAAAGGATTTATTCAGCTTACACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIPAKTSCPRSK*GRKGFIQLTLP Trigger: TGGAAGTGTAAGCTGAATAAATCCTTTCCTCCCCAACTTGCTTCTTGGACATGATGTTTTTGCAGGAATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR GCA 90 bp | TTGGTCACCTGTCCATTTAAAAATTCTGTTAAACAAGAACAATGGAAAGGAGGAGATGAAGTAAGACTGTaGAATGCAGGCATCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTCPFKNSVKQEQWKGGDEVRL*NAGIKA Trigger: AGCCTTGATGCCTGCATTGCACAGTCTTACTTCATC...TCCTCCTTTCCATTGTTCTTGTTTAACAGAATTTTTAAATGGACAGGTGACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| 3UTR CAA 72 bp | GTAATGCAAAGTTTTTGCTTTAGTAGTTCTGGTATCTaGTTAATCACAGCTGATTCTTCAGCCCCAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VMQSFCFSSSGI*LITADSSAPAN Trigger: GTTAGCTGGGGCTGAAGAATCAGCTGTGATTAACAAGATACCAGAACTACTAAAGCAAAAACTTTGCATTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR TCA 90 bp | TTGGTCACCTGTCCATTTAAAAATTCTGTTAAACAAGAACAATGGAAAGGAGGACATTGCATAGATGGTTaGGAAAGGAATGGCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTCPFKNSVKQEQWKGGHCIDG*ERNGKE Trigger: TTCTTTGCCATTCCTTTCTCAACCATCTATGCAATG...TCCTCCTTTCCATTGTTCTTGTTTAACAGAATTTTTAAATGGACAGGTGACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR CCA 90 bp | TTGGTCACCTGTCCATTTAAAAATTCTGTTAAACAAGAACAATGGAAAGGAGGAACACCATTGCATAGATaGTTGAGAAAGGAATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTCPFKNSVKQEQWKGGTPLHR*LRKEWQ Trigger: TTGCCATTCCTTTCTCAACCATCTATGCAATGGTGT...TCCTCCTTTCCATTGTTCTTGTTTAACAGAATTTTTAAATGGACAGGTGACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS TCA 90 bp | CAATCGATAGAACTGTGTGCAGGATCATCACGTAGGAGGCAAGAATaGGCACTGCATCCAGTAACAGGGTGCAAATCACCAGAGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSIELCAGSSRRRQE*ALHPVTGCKSPETE Trigger: CTCTGTCTCTGGTGATTTGCACCCTGTTACTGGATGCAGTGCTCATTCTTGCCTCCTACGTGATGATCCTGCACACAGTTCTATCGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS-3UTR CAA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCCATTCGAATCAAGTCTaGGTGCAGGCAGAAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTSILLLITKGSQAWNSSHSNQV*VQAERV Trigger: CACTCTTTCTGCCTGCACCAAGACTTGATTCGAATG...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR CAA 90 bp | TACACTTCCATACTGCTGCTCATCACCAAAGGAAGTCAGGCCTGGAACTCAAGCCATGTTTGCAAAGACTaGATTCTCTCCTCCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTSILLLITKGSQAWNSSHVCKD*ILSSLD Trigger: ATCCAGGGAGGAGAGAATCAAGTCTTTGCAAACATG...GCTTGAGTTCCAGGCCTGACTTCCTTTGGTGATGAGCAGCAGTATGGAAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS GCA 90 bp | TGGGCTGGTGCAGACTTGACTCTGTTCGGATTACATGAAGTATCATaGAGTTTCCCAGGAACACCATTGCATAGATGGTTGAGAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAGADLTLFGLHEVS*SFPGTPLHRWLRKE Trigger: TTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAATCCGAACAGAGTCAAGTCTGCACCAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS TCA 90 bp | ATGAAGTATCATGCAGTTTCCCAGGAACACCATTGCATAGATGGTTaGGAAAGGAATGGCAAAGAAGTAGTAGACTTCCAGGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MKYHAVSQEHHCIDG*ERNGKEVVDFQARK Trigger: TTTCCTGGCCTGGAAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS TCA 90 bp | AAACCAAAACAGCAGAGATGTGAGATACACATGTTTGCAAAGACTTaGTTCTCTCCTCCCTGGATGCAATCGATAGAACTGTGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPKQQRCEIHMFAKT*FSPPWMQSIELCAG Trigger: TCCTGCACACAGTTCTATCGATTGCATCCAGGGAGGAGAGAATCAAGTCTTTGCAAACATGTGTATCTCACATCTCTGCTGTTTTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS CCA 90 bp | TTACATGAAGTATCATGCAGTTTCCCAGGAACACCATTGCATAGATaGTTGAGAAAGGAATGGCAAAGAAGTAGTAGACTTCCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHEVSCSFPGTPLHR*LRKEWQRSSRLPGQ Trigger: CTGGCCTGGAAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR CAA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAATTCCCAGGAACACCATaGCATAGATGGTTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQFPGTP*HRWLRK Trigger: CTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAA...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR CAA 90 bp | TTAACTGTGGGCTCCACTAAAACAGTTTCTTCCTTCAAGAGGGAAAATATCAGGCCATTGCATAGATGGTaGAGAAAGGAATGGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTVGSTKTVSSFKRENIRPLHRW*RKEWQR Trigger: TCTTTGCCATTCCTTTCTCAACCATCTATGCAATGG...CCTGATATTTTCCCTCTTGAAGGAAGAAACTGTTTTAGTGGAGCCCACAGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS-3UTR CAA 90 bp | AAATATCAGGGCACAGTCACAATCAAAAGCAAAAGTCAATCTCCAACCGTCCAAATCAAGGCTGATCTCTaGAAGAAATCCCCAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KYQGTVTIKSKSQSPTVQIKADL*KKSPKN Trigger: ATTCTTTGGGGATTTCTTCAAGAGATCAGCCTTGAT...TTGGACGGTTGGAGATTGACTTTTGCTTTTGATTGTGACTGTGCCCTGATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS TCA 72 bp | GAACTGTGTGCAGGATCATCACGTAGGAGGCAAGAATaGGCACTGCATCCAGTAACAGGGTGCAAATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ELCAGSSRRRQE*ALHPVTGCKSP Trigger: TGGTGATTTGCACCCTGTTACTGGATGCAGTGCTCATTCTTGCCTCCTACGTGATGATCCTGCACACAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS TCA 72 bp | ATGGGCTGGTGCAGACTTGACTCTGTTCGGATTACATaGAGTATCATGCAGTTTCCCAGGAACACCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MGWCRLDSVRIT*SIMQFPRNTIA Trigger: TGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAATCCGAACAGAGTCAAGTCTGCACCAGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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| CDS CCA 72 bp | CCAGGAACACCATTGCATAGATGGTTGAGAAAGGAATaGCAAAGAAGTAGTAGACTTCCAGGCCAGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PGTPLHRWLRKE*QRSSRLPGQEI Trigger: GATTTCCTGGCCTGGAAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS CAA 90 bp | CATGAAGTATCATGCAGTTTCCCAGGAACACCATTGCATAGATGGTaGAGAAAGGAATGGCAAAGAAGTAGTAGACTTCCAGGCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HEVSCSFPGTPLHRW*RKEWQRSSRLPGQE Trigger: TTCCTGGCCTGGAAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS TCA 72 bp | CATGCAGTTTCCCAGGAACACCATTGCATAGATGGTTaGGAAAGGAATGGCAAAGAAGTAGTAGACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HAVSQEHHCIDG*ERNGKEVVDFQ Trigger: CTGGAAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS TCA 72 bp | CAGCAGAGATGTGAGATACACATGTTTGCAAAGACTTaGTTCTCTCCTCCCTGGATGCAATCGATAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: QQRCEIHMFAKT*FSPPWMQSIEL Trigger: CAGTTCTATCGATTGCATCCAGGGAGGAGAGAATCAAGTCTTTGCAAACATGTGTATCTCACATCTCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS GCA 72 bp | GCAGACTTGACTCTGTTCGGATTACATGAAGTATCATaGAGTTTCCCAGGAACACCATTGCATAGATGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ADLTLFGLHEVS*SFPGTPLHRWL Trigger: CAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAATCCGAACAGAGTCAAGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS CCA 72 bp | ATAAGATGGCCACTCCGATTTTCAGGATTCTGTCATTaGTTAGGATGGAGGAATAGCGTAGAGGGTTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IRWPLRFSGFCH*LGWRNSVEGCK Trigger: TTTGCAACCCTCTACGCTATTCCTCCATCCTAACCAATGACAGAATCCTGAAAATCGGAGTGGCCATCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS CCA 72 bp | GTATCATGCAGTTTCCCAGGAACACCATTGCATAGATaGTTGAGAAAGGAATGGCAAAGAAGTAGTAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: VSCSFPGTPLHR*LRKEWQRSSRL Trigger: AAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS CAA 90 bp | CTGTTCGGATTACATGAAGTATCATGCAGTTTCCCAGGAACACCATaGCATAGATGGTTGAGAAAGGAATGGCAAAGAAGTAGTAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: LFGLHEVSCSFPGTP*HRWLRKEWQRSSRL Trigger: AAGTCTACTACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAATCCGAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
||
| CDS CAA 72 bp | TTACATGAAGTATCATGCAGTTTCCCAGGAACACCATaGCATAGATGGTTGAGAAAGGAATGGCAAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LHEVSCSFPGTP*HRWLRKEWQRS Trigger: ACTTCTTTGCCATTCCTTTCTCAACCATCTATGCAATGGTGTTCCTGGGAAACTGCATGATACTTCATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062144.4 |
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