Pregenerated sensors for OLFR620 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045132Ensembl transcript IDs: ENSMUST00000052152.3, ENSMUST00000217603.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGGCAGGCAGTTGTGGTGCACACCTTTAATCAATCCCAGAACTTaGGAGGCAGAGGTAGGCAGATTTCTGAGTTTGAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KGRQLWCTPLINPRT*EAEVGRFLSLRPAW Trigger: CCAGGCTGGCCTCAAACTCAGAAATCTGCCTACCTCTGCCTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 90 bp | GGGGCATCAGAGTTCCTCATCCCACTGCAAGAAACTCACAAACCATaGTCTCACTTCCTACCCCTGAACTTGCCAAGCTCTGAAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GASEFLIPLQETHKP*SHFLPLNLPSSEGF Trigger: AAAGCCTTCAGAGCTTGGCAAGTTCAGGGGTAGGAAGTGAGATCATGGTTTGTGAGTTTCTTGCAGTGGGATGAGGAACTCTGATGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 90 bp | CCAGCAGAATCTTTCTGTCATGAAAAGAGGAAAGGCAGGCAGTTGTaGTGCACACCTTTAATCAATCCCAGAACTTGGGAGGCAGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: PAESFCHEKRKGRQL*CTPLINPRTWEAEV Trigger: TACCTCTGCCTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTTCCTCTTTTCATGACAGAAAGATTCTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 90 bp | ATAACCCCAAGAGGTCCAGAACCCTCCACAAGTACCCATATACACTaGGATAAGCACACACTCAAACACATCCACACACACGAACACATC | + |
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Preference number: 1 (lower is better) Translates to: ITPRGPEPSTSTHIH*DKHTLKHIHTHEHI Trigger: GATGTGTTCGTGTGTGTGGATGTGTTTGAGTGTGTGCTTATCCCAGTGTATATGGGTACTTGTGGAGGGTTCTGGACCTCTTGGGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 90 bp | TCCCTGACACACCATATCAACCATGACAGAGAGACAATGGAGTCCTaGTGCCCATGTAGCATGACTAGTATAAGAAAGGGTGAAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SLTHHINHDRETMES*CPCSMTSIRKGERG Trigger: GCCTCTTTCACCCTTTCTTATACTAGTCATGCTACATGGGCATCAGGACTCCATTGTCTCTCTGTCATGGTTGATATGGTGTGTCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 90 bp | AAACAGCTCCTACACCTAAAGGGGCTCAGTGAACATTGCAGAAGATaGGGCAGAAAGCTTGTGTATGAGGCATTATCTATTAGTCATGTC | + |
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Preference number: 1 (lower is better) Translates to: KQLLHLKGLSEHCRR*GRKLVYEALSISHV Trigger: GACATGACTAATAGATAATGCCTCATACACAAGCTTTCTGCCCCATCTTCTGCAATGTTCACTGAGCCCCTTTAGGTGTAGGAGCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 90 bp | TCAGAAACCACACCCATTAGGTCTCACCAAATAATTTTTCAAACATaGATAACCGCAATCCACACGCTGAAGAGGATGTGGGAAAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SETTPIRSHQIIFQT*ITAIHTLKRMWESS Trigger: TGAGCTTTCCCACATCCTCTTCAGCGTGTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGTGGTTTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 90 bp | ATGGAAATATCCCATTTTCTGCTTGACTATCTAAAGAAAAGTCCCTaGCACACCATATCAACCATGACAGAGAGACAATGGAGTCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: MEISHFLLDYLKKSP*HTISTMTERQWSPD Trigger: ATCAGGACTCCATTGTCTCTCTGTCATGGTTGATATGGTGTGTCAGGGACTTTTCTTTAGATAGTCAAGCAGAAAATGGGATATTTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 90 bp | AGCCTAAATGATGGACTTTTACAGACTGTGGTGACTCTGGATCATTaGTTTTCCTTGATTAGGAATCTATTTCACATATGTCATGAAACT | + |
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Preference number: 1 (lower is better) Translates to: SLNDGLLQTVVTLDH*FSLIRNLFHICHET Trigger: AGTTTCATGACATATGTGAAATAGATTCCTAATCAAGGAAAAGCAATGATCCAGAGTCACCACAGTCTGTAAAAGTCCATCATTTAGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CAA 90 bp | GAAAGGCAGGCAGTTGTGGTGCACACCTTTAATCAATCCCAGAACTaGGGAGGCAGAGGTAGGCAGATTTCTGAGTTTGAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ERQAVVVHTFNQSQN*GGRGRQISEFEASL Trigger: CAGGCTGGCCTCAAACTCAGAAATCTGCCTACCTCTGCCTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTGGCAGGCAGTTGTGGTaGACACCTTTAATCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: LSTNKYICKQLLHLKGLSGRQLW*TPLINP Trigger: GGGATTGATTAAAGGTGTGCACCACAACTGCCTGCC...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CCA 90 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATGGATAACCGCAATCCACAGATGCAGGCTTCCCTaGTCCCCTCACAGGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: TPIRSHQIIFQTWITAIHRCRLP*SPHRIL Trigger: TAGGATCCTGTGAGGGGACCAGGGAAGCCTGCATCT...GTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTATCAATCCCAGAACTTaGGAGGCAGAGGTAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LSTNKYICKQLLHLKGLSINPRT*EAEVGR Trigger: TCTGCCTACCTCTGCCTCCCAAGTTCTGGGATTGAT...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATGGATAACCGCAATCCACCTTGAGGACTATGGCTaGAGGCCACATGAGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: TPIRSHQIIFQTWITAIHLEDYG*RPHESL Trigger: CAATGACTCATGTGGCCTTCAGCCATAGTCCTCAAG...GTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCCCTGAAAATGTACATACAAGTAACATTTCAGAAAGTGGGCAGGTTATGGCAGGCTTCAAAACTTaGGGACTATGGCTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: FSPENVHTSNISESGQVMAGFKT*GLWLKA Trigger: GGCCTTCAGCCATAGTCCTCAAGTTTTGAAGCCTGC...CATAACCTGCCCACTTTCTGAAATGTTACTTGTATGTACATTTTCAGGGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCCCTGAAAATGTACATACAAGTAACATTTCAGAAAGTGGGCAGGTTATGCTCACTTCCTACCCCTaGACTTGCCAAGCTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSPENVHTSNISESGQVMLTSYP*TCQALK Trigger: CTTCAGAGCTTGGCAAGTTCAGGGGTAGGAAGTGAG...CATAACCTGCCCACTTTCTGAAATGTTACTTGTATGTACATTTTCAGGGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTGGATAATGAGGGAGACACCATATCAACCATaGCAGAGAGACAATGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLSLVSTAVKARAWIMRETPYQP*QRDNGV Trigger: GACTCCATTGTCTCTCTGTCATGGTTGATATGGTGT...CTCCCTCATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATGGATAACCGCAATCCACTGGCTGAAGGCCACATaGGTCATTGAATACAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TPIRSHQIIFQTWITAIHWLKAT*VIEYRR Trigger: TCTCCTGTATTCAATGACTCATGTGGCCTTCAGCCA...GTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCTGCTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTGGATAATGAAGGCTTTGGGCAGGTaGGTATTTGTGCAATATTCC | + |
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Preference number: 2 (lower is better) Translates to: RVLLSLVSTAVKARAWIMKALGR*VFVQYS Trigger: GGAATATTGCACAAATACTCACCTGCCCAAAGCCTT...CATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAGCAGGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTGTATACAGAAGGGTTTaGAGGAAGGAAAGGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSTNKYICKQLLHLKGLSVYRRV*RKERGN Trigger: ATTTCCCCTTTCCTTCCTTCAAACCCTTCTGTATAC...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACACAGTACATGACATTATGCCCTATGTTAGCCATCTTAACTTATATAAGGCCTAAAGGGGCTCAGTaGACATTGCAGAAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: TTQYMTLCPMLAILTYIRPKGAQ*TLQKMG Trigger: CCCCATCTTCTGCAATGTTCACTGAGCCCCTTTAGG...CCTTATATAAGTTAAGATGGCTAACATAGGGCATAATGTCATGTACTGTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTGGATAATGAGGGAGAAAGGCAGGCAGTTGTaGTGCACACCTTTAATCAAT | + |
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Preference number: 2 (lower is better) Translates to: LLSLVSTAVKARAWIMREKGRQL*CTPLIN Trigger: ATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTT...CTCCCTCATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATGGATAACCGCAATCCACAGAATCTTTCTGTCATaGAAAGAGGAAAGGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TPIRSHQIIFQTWITAIHRIFLS*KEERQA Trigger: TGCCTGCCTTTCCTCTTTTCATGACAGAAAGATTCT...GTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACACAGTACATGACATTATGCCCTATGTTAGCCATCTTAACTTATATAAGGGAGAGGCCATCAATTTaGACTAGAGAAAGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TTQYMTLCPMLAILTYIRERPSI*TRERRS Trigger: ACTCCTCCTTTCTCTAGTTCAAATTGATGGCCTCTC...CCTTATATAAGTTAAGATGGCTAACATAGGGCATAATGTCATGTACTGTGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACACAGTACATGACATTATGCCCTATGTTAGCCATCTTAACTTATATAAGGTTTTACAGACTGTGGTaGCTCTGGATCATTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TTQYMTLCPMLAILTYIRFYRLW*LWIIAF Trigger: AAAAGCAATGATCCAGAGTCACCACAGTCTGTAAAA...CCTTATATAAGTTAAGATGGCTAACATAGGGCATAATGTCATGTACTGTGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACACAGTACATGACATTATGCCCTATGTTAGCCATCTTAACTTATATAAGGGAGATGATTCAGAAGTaGAGAGCACTTTCTACACTT | + |
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Preference number: 2 (lower is better) Translates to: TTQYMTLCPMLAILTYIREMIQK*RALSTL Trigger: AAGTGTAGAAAGTGCTCTTCACTTCTGAATCATCTC...CCTTATATAAGTTAAGATGGCTAACATAGGGCATAATGTCATGTACTGTGTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR GCA 90 bp | TTTAGCCCTGAAAATGTACATACAAGTAACATTTCAGAAAGTGGGCAGGTTATGGATAAACACCCAATGTaGATTAATGATACAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: FSPENVHTSNISESGQVMDKHPM*INDTDG Trigger: TCCATCTGTATCATTAATGCACATTGGGTGTTTATC...CATAACCTGCCCACTTTCTGAAATGTTACTTGTATGTACATTTTCAGGGCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | TCTCACTTCCTACCCCTGAACTTGCCAAGCTCTGAAGGCTTTGGGCAGGTGAGTTTTACTTTGGTGTTTTaGACAAGCGATGCGGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: SHFLPLNLPSSEGFGQVSFTLVF*TSDAGR Trigger: CCTACCCGCATCGCTTGTCAAAAACACCAAAGTAAA...ACTCACCTGCCCAAAGCCTTCAGAGCTTGGCAAGTTCAGGGGTAGGAAGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 72 bp | AAACAGCTCCTACACCTAAAGGGGCTCAGTGAACATTaGAGAAGATGGGGCAGAAAGCTTGTGTATGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KQLLHLKGLSEH*RRWGRKLVYEA Trigger: TGCCTCATACACAAGCTTTCTGCCCCATCTTCTGCAATGTTCACTGAGCCCCTTTAGGTGTAGGAGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 72 bp | AGAGGTCCAGAACCCTCCACAAGTACCCATATACACTaGGATAAGCACACACTCAAACACATCCACACACAC | + |
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Preference number: 3 (lower is better) Translates to: RGPEPSTSTHIH*DKHTLKHIHTH Trigger: GTGTGTGTGGATGTGTTTGAGTGTGTGCTTATCCCAGTGTATATGGGTACTTGTGGAGGGTTCTGGACCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | TCATGTTGTGAACCTTGGAGGAGAACCACCACCTCATTAAACCAGAATAATCCCAATCAATCCCAGAACTaGGGAGGCAGAGGTAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SCCEPWRRTTTSLNQNNPNQSQN*GGRGRQ Trigger: CTGCCTACCTCTGCCTCCCAAGTTCTGGGATTGATT...GGGATTATTCTGGTTTAATGAGGTGGTGGTTCTCCTCCAAGGTTCACAACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 72 bp | TTCTGTCATGAAAAGAGGAAAGGCAGGCAGTTGTGGTaGACACCTTTAATCAATCCCAGAACTTGGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FCHEKRKGRQLW*TPLINPRTWEA Trigger: TGCCTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTTCCTCTTTTCATGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTTTCCTACCCCTGAACTaGCCAAGCTCTGAAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSTNKYICKQLLHLKGLSFLPLN*PSSEGF Trigger: AAAGCCTTCAGAGCTTGGCAAGTTCAGGGGTAGGAA...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | TCTGAGTCCAGGTACAGGAAGGGGTTTGACAGCCAATaGCTGAATGGTTCAGTCAGAACTTACACAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SESRYRKGFDSQ*LNGSVRTYTKR Trigger: TCTCTTTGTGTAAGTTCTGACTGAACCATTCAGTCATTGGCTGTCAAACCCCTTCCTGTACCTGGACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 72 bp | CTAAAGTGTAAGGGGCATCAGAGTTCCTCATCCCACTaGAAGAAACTCACAAACCATGATCTCACTTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LKCKGHQSSSSH*KKLTNHDLTSY Trigger: GTAGGAAGTGAGATCATGGTTTGTGAGTTTCTTGCAGTGGGATGAGGAACTCTGATGCCCCTTACACTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 72 bp | TCTTTCTGTCATGAAAAGAGGAAAGGCAGGCAGTTGTaGTGCACACCTTTAATCAATCCCAGAACTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SFCHEKRKGRQL*CTPLINPRTWE Trigger: CTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGCCTGCCTTTCCTCTTTTCATGACAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | GAGAGAGAGCAGGCTTCAAAACTTGAGGACTATGGCTaGAGGCCACATGAGTCATTGAATACAGGAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: EREQASKLEDYG*RPHESLNTGEK Trigger: TTTTTCTCCTGTATTCAATGACTCATGTGGCCTTCAGCCATAGTCCTCAAGTTTTGAAGCCTGCTCTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | CACCATATCAACCATGACAGAGAGACAATGGAGTCCTaGTGCCCATGTAGCATGACTAGTATAAGAAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: HHINHDRETMES*CPCSMTSIRKG Trigger: ACCCTTTCTTATACTAGTCATGCTACATGGGCATCAGGACTCCATTGTCTCTCTGTCATGGTTGATATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 72 bp | AGCAGATCTGTGGAGCTCAGTACTAATAAATACATCTaGAAACAGCTCCTACACCTAAAGGGGCTCAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: SRSVELSTNKYI*KQLLHLKGLSE Trigger: TTCACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAGCTCCACAGATCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR GCA 72 bp | CAGAGGTTGCAATTCCCAGAAACCAATGTGACCAGATaGACCTTTTCTGTGTGTCTGAAGACAGTGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: QRLQFPETNVTR*TFSVCLKTVKM Trigger: CATTTTCACTGTCTTCAGACACACAGAAAAGGTGCATCTGGTCACATTGGTTTCTGGGAATTGCAACCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTGTCACACACTACAGATaGAGAGCAGACGTTGCATAT | + |
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Preference number: 3 (lower is better) Translates to: LSTNKYICKQLLHLKGLSVTHYR*RADVAY Trigger: ATATGCAACGTCTGCTCTCAATCTGTAGTGTGTGAC...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | AGTCCAGGTACAGGAAGGGGTTTGACAGCCAATGACTaGATGGTTCAGTCAGAACTTACACAAAGAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SPGTGRGLTAND*MVQSELTQREK Trigger: TTTTTCTCTTTGTGTAAGTTCTGACTGAACCATTCAGTCATTGGCTGTCAAACCCCTTCCTGTACCTGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 72 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATaGATAACCGCAATCCACACGCTGAAGAGGATGTGG | + |
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Preference number: 3 (lower is better) Translates to: TPIRSHQIIFQT*ITAIHTLKRMW Trigger: CCACATCCTCTTCAGCGTGTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 72 bp | GAGAATTTGAGTTTGGTTCCCAGCACCCATGTTAAATaGATTAAAGCTGTTTATAACCCCAAGAGGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: ENLSLVPSTHVK*IKAVYNPKRSR Trigger: TCTGGACCTCTTGGGGTTATAAACAGCTTTAATCCATTTAACATGGGTGCTGGGAACCAAACTCAAATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCCTGCTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTGGATAATGTGGGCAGGTGAGTATTaGTGCAATATTCCTGATATA | + |
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Preference number: 3 (lower is better) Translates to: RVLLSLVSTAVKARAWIMWAGEY*CNIPDI Trigger: TATATCAGGAATATTGCACAAATACTCACCTGCCCA...CATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAGCAGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | CATGTCATAAATGACTTAGAAGTACTAGTCATGTTGTaGACCTTGGAGGAGAACCACCACCTCATTAAACCA | + |
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Preference number: 3 (lower is better) Translates to: HVINDLEVLVML*TLEENHHLIKP Trigger: TGGTTTAATGAGGTGGTGGTTCTCCTCCAAGGTTCACAACATGACTAGTACTTCTAAGTCATTTATGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | AGAAGTGAAGAGCACTTTCTACACTTGTTGAGAATTTaGGTTTGGTTCCCAGCACCCATGTTAAATGGATTA | + |
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Preference number: 3 (lower is better) Translates to: RSEEHFLHLLRI*VWFPAPMLNGL Trigger: TAATCCATTTAACATGGGTGCTGGGAACCAAACTCAAATTCTCAACAAGTGTAGAAAGTGCTCTTCACTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CCA 72 bp | CTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTaGATAATGAGGGAGAAAACTGTTGAAGAAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LSLVSTAVKARA*IMREKTVEEGK Trigger: CTTTCCTTCTTCAACAGTTTTCTCCCTCATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR-3UTR CAA 90 bp | TTTAGCCCTGAAAATGTACATACAAGTAACATTTCAGAAAGTGGGCAGGTTATGAGACCATCTTTTACTTaGGTGTTTTTGACAAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: FSPENVHTSNISESGQVMRPSFT*VFLTSD Trigger: ATCGCTTGTCAAAAACACCAAAGTAAAAGATGGTCT...CATAACCTGCCCACTTTCTGAAATGTTACTTGTATGTACATTTTCAGGGCTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR TCA 72 bp | ATTAATGATACAGATGGAAATATCCCATTTTCTGCTTaGCTATCTAAAGAAAAGTCCCTGACACACCATATC | + |
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Preference number: 3 (lower is better) Translates to: INDTDGNIPFSA*LSKEKSLTHHI Trigger: GATATGGTGTGTCAGGGACTTTTCTTTAGATAGTCAAGCAGAAAATGGGATATTTCCATCTGTATCATTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR CCA 90 bp | TCTCACTTCCTACCCCTGAACTTGCCAAGCTCTGAAGGCTTTGGGCAGGTGAGTGGGGTTCATCAAAGGTaGGAAAAGGATGTAGACATT | + |
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Preference number: 4 (lower is better) Translates to: SHFLPLNLPSSEGFGQVSGVHQR*EKDVDI Trigger: AATGTCTACATCCTTTTCCCACCTTTGATGAACCCC...ACTCACCTGCCCAAAGCCTTCAGAGCTTGGCAAGTTCAGGGGTAGGAAGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CAA 72 bp | GCAGTTGTGGTGCACACCTTTAATCAATCCCAGAACTaGGGAGGCAGAGGTAGGCAGATTTCTGAGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: AVVVHTFNQSQN*GGRGRQISEFE Trigger: CTCAAACTCAGAAATCTGCCTACCTCTGCCTCCCAAGTTCTGGGATTGATTAAAGGTGTGCACCACAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTTGCAGGCATCAAGGCTaGTCTCTTGAAGGAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSTNKYICKQLLHLKGLSCRHQG*SLEGSP Trigger: GGGGCTTCCTTCAAGAGATCAGCCTTGATGCCTGCA...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATGCAGGCATCAAGGCTaGTCTCTTGAAGGAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPICRHQG*SLEGSP Trigger: GGGGCTTCCTTCAAGAGATCAGCCTTGATGCCTGCA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| 3UTR CAA 72 bp | CCCTCACAGGATCCTAGAGATAGACCATCTTTTACTTaGGTGTTTTTGACAAGCGATGCGGGTAGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: PSQDPRDRPSFT*VFLTSDAGRCE Trigger: TTCACACCTACCCGCATCGCTTGTCAAAAACACCAAAGTAAAAGATGGTCTATCTCTAGGATCCTGTGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CTCAACAGAGGCTACAGAAGCAGCCTATCACAGAGGAAAGAAACAATGTGTAAATCAAGGCTGATCTCTTaGAGGAAGCCCCAAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: LNRGYRSSLSQRKETMCKSRLIS*RKPQRI Trigger: TATCCTTTGGGGCTTCCTTCAAGAGATCAGCCTTGA...TTTACACATTGTTTCTTTCCTCTGTGATAGGCTGCTTCTGTAGCCTCTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CTCAGTACTAATAAATACATCTGCAAACAGCTCCTACACCTAAAGGGGCTCAGTCCATGGTCAGACCAATaGTGGGGATGTAGAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LSTNKYICKQLLHLKGLSPWSDQ*WGCRKP Trigger: TGGTTTTCTACATCCCCATCATTGGTCTGACCATGG...ACTGAGCCCCTTTAGGTGTAGGAGCTGTTTGCAGATGTATTTATTAGTACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATGCTTCCCAAAGCGGTaGACCATGGTCAGACCAATG | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPICFPKR*TMVRPM Trigger: CATTGGTCTGACCATGGTTCACCGCTTTGGGAAGCA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR TCA 90 bp | GGCATTTATTGTCATTTTTCACATTGTTGGGCTATGATAAACACCCAATGTGCATGCTTCCCAAAGCGGTaGACCATGGTCAGACCAATG | + |
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Preference number: 4 (lower is better) Translates to: GIYCHFSHCWAMINTQCACFPKR*TMVRPM Trigger: CATTGGTCTGACCATGGTTCACCGCTTTGGGAAGCA...TGCACATTGGGTGTTTATCATAGCCCAACAATGTGAAAAATGACAATAAATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATAGACATGAACCAATGGTaGGAGATGCTTCCCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPIDMNQW*EMLPKA Trigger: CGCTTTGGGAAGCATCTCTCACCATTGGTTCATGTC...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR TCA 90 bp | AGAGTCCTGCTGTCTTTAGTTTCTACTGCAGTAAAAGCTAGAGCTTGGATAATGTGTAGACATTGCCCATaGGGACATGAACCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVLLSLVSTAVKARAWIMCRHCP*GHEPMV Trigger: CACCATTGGTTCATGTCCTCATGGGCAATGTCTACA...CATTATCCAAGCTCTAGCTTTTACTGCAGTAGAAACTAAAGACAGCAGGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR GCA 90 bp | TCATGTTGTGAACCTTGGAGGAGAACCACCACCTCATTAAACCAGAATAATCCCAATGAAGTAAGACTGTaGAATGCAGGCATCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SCCEPWRRTTTSLNQNNPNEVRL*NAGIKA Trigger: AGCCTTGATGCCTGCATTGCACAGTCTTACTTCATT...GGGATTATTCTGGTTTAATGAGGTGGTGGTTCTCCTCCAAGGTTCACAACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| 3UTR CAA 72 bp | GGCTCAGTGAACATTGCAGAAGATGGGGCAGAAAGCTaGTGTATGAGGCATTATCTATTAGTCATGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSVNIAEDGAES*CMRHYLLVMSE Trigger: TTCTGACATGACTAATAGATAATGCCTCATACACAAGCTTTCTGCCCCATCTTCTGCAATGTTCACTGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATCAAGGCTGATCTCTTaGAGGAAGCCCCAAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPISRLIS*RKPQRI Trigger: TATCCTTTGGGGCTTCCTTCAAGAGATCAGCCTTGA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATACCATGGTCAGACCAATaGTGGGGATGTAGAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPIPWSDQ*WGCRKP Trigger: TGGTTTTCTACATCCCCATCATTGGTCTGACCATGG...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR TCA 90 bp | TTTAGCCCTGAAAATGTACATACAAGTAACATTTCAGAAAGTGGGCAGGTTATGGACATGAACCAATGGTaGGAGATGCTTCCCAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: FSPENVHTSNISESGQVMDMNQW*EMLPKA Trigger: CGCTTTGGGAAGCATCTCTCACCATTGGTTCATGTC...CATAACCTGCCCACTTTCTGAAATGTTACTTGTATGTACATTTTCAGGGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATGTAGACATTGCCCATaGGGACATGAACCAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPICRHCP*GHEPMV Trigger: CACCATTGGTTCATGTCCTCATGGGCAATGTCTACA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATAAGGACAAACCGTGAATaGAGTAAGACTGTGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPIRTNRE*SKTVQC Trigger: GCATTGCACAGTCTTACTTCATTCACGGTTTGTCCT...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR GCA 90 bp | TCATGTTGTGAACCTTGGAGGAGAACCACCACCTCATTAAACCAGAATAATCCCAGAGGAAATGAGGCCTaGAGTAATTTAAGAACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SCCEPWRRTTTSLNQNNPRGNEA*SNLRTS Trigger: TGAAGTTCTTAAATTACTGCAGGCCTCATTTCCTCT...GGGATTATTCTGGTTTAATGAGGTGGTGGTTCTCCTCCAAGGTTCACAACATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATCTCTCCTCCCTGGATaGAATAGACAGAACTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPISLLPG*NRQNCV Trigger: TACACAGTTCTGTCTATTGCATCCAGGGAGGAGAGA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR CCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATATCAGGATCCTGTCATTaGTTAGGATGGAGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPISGSCH*LGWRNS Trigger: GCTATTCCTCCATCCTAACCAATGACAGGATCCTGA...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR CCA 90 bp | ACACCCATTAGGTCTCACCAAATAATTTTTCAAACATGGATAACCGCAATCCACTCAGGATCCTGTCATTaGTTAGGATGGAGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: TPIRSHQIIFQTWITAIHSGSCH*LGWRNS Trigger: GCTATTCCTCCATCCTAACCAATGACAGGATCCTGA...GTGGATTGCGGTTATCCATGTTTGAAAAATTATTTGGTGAGACCTAATGGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATAAATGAAGTAAGACTGTaGAATGCAGGCATCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPINEVRL*NAGIKA Trigger: AGCCTTGATGCCTGCATTGCACAGTCTTACTTCATT...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATACTAATTAAGTCTTGGTaGAGGCAGAAAGAATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPILIKSW*RQKEWE Trigger: CTCCCATTCTTTCTGCCTGCACCAAGACTTAATTAG...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| CDS-3UTR GCA 90 bp | GGCATTTATTGTCATTTTTCACATTGTTGGGCTATGATAAACACCCAATGTGCATCTCTCCTCCCTGGATaGAATAGACAGAACTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GIYCHFSHCWAMINTQCASLLPG*NRQNCV Trigger: TACACAGTTCTGTCTATTGCATCCAGGGAGGAGAGA...TGCACATTGGGTGTTTATCATAGCCCAACAATGTGAAAAATGACAATAAATGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR CCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATAGGGGTTCATCAAAGGTaGGAAAAGGATGTAGACATT | + |
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Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPIGVHQR*EKDVDI Trigger: AATGTCTACATCCTTTTCCCACCTTTGATGAACCCC...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| 3UTR CAA 72 bp | CACAGTTATGAAAGCGCCATAGTCACACACTACAGATaGAGAGCAGACGTTGCATATACGTGTATTATGTAT | + |
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Preference number: 4 (lower is better) Translates to: HSYESAIVTHYR*RADVAYTCIMY Trigger: ATACATAATACACGTATATGCAACGTCTGCTCTCAATCTGTAGTGTGTGACTATGGCGCTTTCATAACTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS-3UTR GCA 90 bp | CAGTCCAATCTCATAGGTTTCTCTTTTCTTATGTTACAAGTGGCTGACCCAATAAGAGGAAATGAGGCCTaGAGTAATTTAAGAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSNLIGFSFLMLQVADPIRGNEA*SNLRTS Trigger: TGAAGTTCTTAAATTACTGCAGGCCTCATTTCCTCT...TATTGGGTCAGCCACTTGTAACATAAGAAAAGAGAAACCTATGAGATTGGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052152.3 |
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| 3UTR CAA 72 bp | GTCTTAGCTGGGCATTTATTGTCATTTTTCACATTGTaGGGCTATGATAAACACCCAATGTGCATTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLAGHLLSFFTL*GYDKHPMCIND Trigger: ATCATTAATGCACATTGGGTGTTTATCATAGCCCAACAATGTGAAAAATGACAATAAATGCCCAGCTAAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217603.3 |
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| CDS TCA 72 bp | ATGGGCTGGTGCAGGCTCAGCTCAGTCCGAATCACATaGAGTACCATACAATTTCCCAGGAACACCGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: MGWCRLSSVRIT*STIQFPRNTVT Trigger: TGTGACGGTGTTCCTGGGAAATTGTATGGTACTTCATGTGATTCGGACTGAGCTGAGCCTGCACCAGCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052152.3 ENSMUST00000217603.3 |
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| CDS GCA 72 bp | CTCCATGAAGGACAAACCGTGAATGAAGTAAGACTGTaGAATGCAGGCATCAAGGCTGATCTCTTGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LHEGQTVNEVRL*NAGIKADLLKE Trigger: TTCCTTCAAGAGATCAGCCTTGATGCCTGCATTGCACAGTCTTACTTCATTCACGGTTTGTCCTTCATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052152.3 ENSMUST00000217603.3 |
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| CDS CCA 72 bp | ATAAGATGGCCACTCCGATTTTCAGGATCCTGTCATTaGTTAGGATGGAGGAATAGCGTAGAGGGTTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IRWPLRFSGSCH*LGWRNSVEGCK Trigger: TTTGCAACCCTCTACGCTATTCCTCCATCCTAACCAATGACAGGATCCTGAAAATCGGAGTGGCCATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052152.3 ENSMUST00000217603.3 |
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