Pregenerated sensors for OLFR62 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043698Ensembl transcript IDs: ENSMUST00000102666.5, ENSMUST00000213189.3, ENSMUST00000217013.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCCCATATGGTGGACTaGAGGAGAACTGACACCCACAGCCTGTTCTTCAGTCTCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: KSGRLSLIVRSHMVD*RRTDTHSLFFSLHK Trigger: CTTGTGGAGACTGAAGAACAGGCTGTGGGTGTCAGTTCTCCTTCAGTCCACCATATGGGACCTGACGATCAAACTCAGGCGGCCAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCGAGGAAGTTATTCGGTaGGGGCGGCGGGGAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: ADRGICCQVWPPEFDRQVEEVIR*GRRGGV Trigger: TACTCCTCCCCGCCGCCCCCACCGAATAACTTCCTC...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGGGAATCAAATCTGGGTTTCCTGGAAGAGCAGCCAGTGCTCTTAACGACCCAAAAGTCTGCCTGTaGGGGCCAGGGAGAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: MLGIKSGFPGRAASALNDPKVCL*GPGRGS Trigger: TGAGCCTCTCCCTGGCCCTCACAGGCAGACTTTTGG...GTCGTTAAGAGCACTGGCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCCCCTTTACAGAAAGCTaGATGGAGACTGTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ADRGICCQVWPPEFDRQVPFTES*METVPG Trigger: TCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGG...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCTTACAGAAAGCTGCATaGAGACTGTTCCAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ADRGICCQVWPPEFDRQVLQKAA*RLFQEA Trigger: AGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAA...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTGCTGCAGAGGAAGTTATTCGGTaGGGGCGGCGGGGAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGNPGLHPSRIVRILSAAEEVIR*GRRGGV Trigger: TACTCCTCCCCGCCGCCCCCACCGAATAACTTCCTC...TGCAGCACTGAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGGGAATCAAATCTGGGTTTCCTGGAAGAGCAGCCAGTGCTCTTAACGACTCCACAAGCGCATCATaGCACACGGGTCCCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: MLGIKSGFPGRAASALNDSTSAS*HTGPLP Trigger: TGGGAGGGGACCCGTGTGCCATGATGCGCTTGTGGA...GTCGTTAAGAGCACTGGCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATGACAGAGGCATCTGCTaGCAAGTCTGGCCGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RASPLDLELKIGVSYLMDDRGIC*QVWPPE Trigger: CTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTC...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCCCAAAAGTCTGCCTGTaGGGGCCAGGGAGAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: CFQSGNPGLHPSRIVRILPKVCL*GPGRGS Trigger: TGAGCCTCTCCCTGGCCCTCACAGGCAGACTTTTGG...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCATTCGAGGCTGGAATTaGGGACCATATACAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: ADRGICCQVWPPEFDRQVIRGWN*GPYTML Trigger: TAACATTGTATATGGTCCCCAATTCCAGCCTCGAAT...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATTCCCATATGGTGGACTaGAGGAGAACTGACACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RASPLDLELKIGVSYLMDSHMVD*RRTDTH Trigger: GTGGGTGTCAGTTCTCCTTCAGTCCACCATATGGGA...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATGCTGGGAATCAAATCTaGGTTTCCTGGAAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RASPLDLELKIGVSYLMDAGNQI*VSWKSS Trigger: GCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGC...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTGGGAATCAAATCTGGGTTTCCTGGAAGAGCAGCCAGTGCTCTTAACGACTACATTGTGTGGTGGTaGGATAGTTCTATACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: MLGIKSGFPGRAASALNDYIVWW*DSSIPR Trigger: TCTGGGTATAGAACTATCTCACCACCACACAATGTA...GTCGTTAAGAGCACTGGCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTGCTGCAAAAGGGGTTTTAAGATaGGTGAAATCAGACACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SGNPGLHPSRIVRILSAAKGVLR*VKSDTL Trigger: CAGGGTGTCTGATTTCACTCATCTTAAAACCCCTTT...TGCAGCACTGAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCCCCTTTACAGAAAGCTaGATGGAGACTGTTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: CFQSGNPGLHPSRIVRILPFTES*METVPG Trigger: TCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGG...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTGTAACATTCAAAAGATaGGGAAGTTATTCGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGFKMSEIRHPDITYCLCVTFKR*GSYSVG Trigger: CCCCACCGAATAACTTCCTCATCTTTTGAATGTTAC...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCGTAACATTCAAAAGATaGGGAAGTTATTCGGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CFQSGNPGLHPSRIVRILVTFKR*GSYSVG Trigger: CCCCACCGAATAACTTCCTCATCTTTTGAATGTTAC...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATCAAATTAAACTGTGGTaGTATGGAATACACTACTGC | + |
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Preference number: 2 (lower is better) Translates to: RASPLDLELKIGVSYLMDQIKLW*YGIHYC Trigger: GCAGTAGTGTATTCCATATCACCACAGTTTAATTTG...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | AGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTGCTGCACAGCATCTGTTTAAGTaGATTCTGATATGTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGNPGLHPSRIVRILSAAQHLFK*ILICME Trigger: TTCCATACATATCAGAATGCACTTAAACAGATGCTG...TGCAGCACTGAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTATTCGAGGCTGGAATTaGGGACCATATACAATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: RGFKMSEIRHPDITYCLCIRGWN*GPYTML Trigger: TAACATTGTATATGGTCCCCAATTCCAGCCTCGAAT...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCCCTGACATCACATACTaGCTCTGTTTATGTAACATT | + |
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Preference number: 2 (lower is better) Translates to: CFQSGNPGLHPSRIVRILPDITY*LCLCNI Trigger: AATGTTACATAAACAGAGGCAGTATGTGATGTCAGG...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTTCTATACCCAGATaGAGTTTTATGAGCCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: CFQSGNPGLHPSRIVRILSSIPR*SFMSLY Trigger: ATACAGGCTCATAAAACTCCATCTGGGTATAGAACT...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR TCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTTGTTTAAGTGCATTCTaGTATGTATGGAATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: GMYLRLIWWTTCPSTLSICLSAF*YVWNGI Trigger: GATGCCATTCCATACATATCAGAATGCACTTAAACA...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTCCTGACATCACATACTaGCTCTGTTTATGTAACATT | + |
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Preference number: 2 (lower is better) Translates to: GMYLRLIWWTTCPSTLSIPDITY*LCLCNI Trigger: AATGTTACATAAACAGAGGCAGTATGTGATGTCAGG...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTTTAGGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACAAGTTCTATACCCAGATaGAGTTTTATGAGCCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LLLGMYLRLIWWTTCPSTSSIPR*SFMSLY Trigger: ATACAGGCTCATAAAACTCCATCTGGGTATAGAACT...TGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACCTAAAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR GCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTCAGCATCTGTTTAAGTaGATTCTGATATGTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: GMYLRLIWWTTCPSTLSIQHLFK*ILICME Trigger: TTCCATACATATCAGAATGCACTTAAACAGATGCTG...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTACTATATACATACCCTaGCATTCACACTCTATGTAT | + |
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Preference number: 2 (lower is better) Translates to: GMYLRLIWWTTCPSTLSITIYIP*HSHSMY Trigger: ATACATAGAGTGTGAATGCCAGGGTATGTATATAGT...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR CCA 72 bp | AGAGGCTCAGCAGACAGAGGCATCTGCTGCCAAGTCTaGCCGCCTGAGTTTGATCGTCAGGTCCCATATGGT | + |
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Preference number: 3 (lower is better) Translates to: RGSADRGICCQV*PPEFDRQVPYG Trigger: ACCATATGGGACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGCTGAGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTAGTAAGTTAGTGACTTaGAACCACGTCAACTCACTG | + |
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Preference number: 3 (lower is better) Translates to: RGFKMSEIRHPDITYCLCSKLVT*NHVNSL Trigger: CAGTGAGTTGACGTGGTTCAAAGTCACTAACTTACT...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCCTTCTTGTCCTCTTCTaGGGAGGACTCAGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ADRGICCQVWPPEFDRQVLLVLF*GGLRAR Trigger: CCTGGCTCTGAGTCCTCCCCAGAAGAGGACAAGAAG...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | GGAAGACTCCCCCTTTACAGAAAGCTGCATGGAGACTGTTCCAGGAGGCTGCTAGGGGCACTGTGGTGGTaGCATAGCCCATATCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRLPLYRKLHGDCSRRLLGALWW*HSPYPE Trigger: TTCTGGATATGGGCTATGTCACCACCACAGTGCCCC...TAGCAGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGGGGAGTCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | TGGAAGACTCCCCCTTTACAGAAAGCTGCATGGAGACTGTTCCAGGAGGCTGCTGGGGCACTGTGGTGGTaGCATAGCCCATATCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WKTPPLQKAAWRLFQEAAGALWW*HSPYPE Trigger: TTCTGGATATGGGCTATGTCACCACCACAGTGCCCC...AGCAGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGGGGAGTCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | GGAAGACTCCCCCTTTACAGAAAGCTGCATGGAGACTGTTCCAGGAGGCTGCTAAGATGTACCAGCATCTaGGGCACTGTGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: GRLPLYRKLHGDCSRRLLRCTSI*GTVVVT Trigger: TGTCACCACCACAGTGCCCCAGATGCTGGTACATCT...TAGCAGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGGGGAGTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR GCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCAGATGCCAAACAGAATaGCATTTATCTGTGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: ADRGICCQVWPPEFDRQVRCQTE*HLSVCY Trigger: GTAACACACAGATAAATGGCATTCTGTTTGGCATCT...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR GCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCAGAGGAGAAGAAAGATaGCAAACAGAATGCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: ADRGICCQVWPPEFDRQVRGEER*QTECHL Trigger: TAAATGGCATTCTGTTTGGCATCTTTCTTCTCCTCT...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | GCAGACAGAGGCATCTGCTGCCAAGTCTGGCCGCCTGAGTTTGATCGTCAGGTCATCCAACATAGGATATaGTCTTCTTCTTACAGACCA | + |
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Preference number: 4 (lower is better) Translates to: ADRGICCQVWPPEFDRQVIQHRI*SSSYRP Trigger: TGGTCTGTAAGAAGAAGACCATATCCTATGTTGGAT...GACCTGACGATCAAACTCAGGCGGCCAGACTTGGCAGCAGATGCCTCTGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | GGAAGACTCCCCCTTTACAGAAAGCTGCATGGAGACTGTTCCAGGAGGCTGCTAGAATGGATAAGACACTaGGGAAAAAGTACATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GRLPLYRKLHGDCSRRLLEWIRH*GKSTWV Trigger: CACCCATGTACTTTTTCCTCAGTGTCTTATCCATTC...TAGCAGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGGGGAGTCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATTGCTGCCCACTACCTTaGGGAAAGCCCTTTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: RASPLDLELKIGVSYLMDCCPLP*GKPFSH Trigger: ATGTGAAAAGGGCTTTCCTCAAGGTAGTGGGCAGCA...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCCTTCTTGTCCTCTTCTaGGGAGGACTCAGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CFQSGNPGLHPSRIVRILLLVLF*GGLRAR Trigger: CCTGGCTCTGAGTCCTCCCCAGAAGAGGACAAGAAG...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | AGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTGCTGCAGAATGGATAAGACACTaGGGAAAAAGTACATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGNPGLHPSRIVRILSAAEWIRH*GKSTWV Trigger: CACCCATGTACTTTTTCCTCAGTGTCTTATCCATTC...TGCAGCACTGAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | AGGGCGTCTCCCCTGGACCTGGAGTTAAAGATAGGTGTTAGTTATCTCATGGATACCTATCATAGGCCATaGTTGCAAACAGCCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: RASPLDLELKIGVSYLMDTYHRP*LQTAKT Trigger: AGTCTTGGCTGTTTGCAATCATGGCCTATGATAGGT...ATCCATGAGATAACTAACACCTATCTTTAACTCCAGGTCCAGGGGAGACGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | ATGCTGGGAATCAAATCTGGGTTTCCTGGAAGAGCAGCCAGTGCTCTTAACGACAATGATGAGGGAGAGTaGGACCAAAAGAAGGATAAA | + |
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Preference number: 4 (lower is better) Translates to: MLGIKSGFPGRAASALNDNDEGE*DQKKDK Trigger: TTTATCCTTCTTTTGGTCCCACTCTCCCTCATCATT...GTCGTTAAGAGCACTGGCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTATCATAGGCCATGATTaGAAACAGCCAAGACTCGGT | + |
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Preference number: 4 (lower is better) Translates to: RGFKMSEIRHPDITYCLCIIGHD*KQPRLG Trigger: ACCGAGTCTTGGCTGTTTGCAATCATGGCCTATGAT...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTAGATGTACCAGCATCTaGGGCACTGTGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: GMYLRLIWWTTCPSTLSIRCTSI*GTVVVT Trigger: TGTCACCACCACAGTGCCCCAGATGCTGGTACATCT...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| 3UTR CAA 72 bp | TCGAGGCTGGAATTGGGGACCATATACAATGTTACATaGTGTGGTGGTGAGATAGTTCTATACCCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: SRLELGTIYNVT*CGGEIVLYPDG Trigger: TCCATCTGGGTATAGAACTATCTCACCACCACACAATGTAACATTGTATATGGTCCCCAATTCCAGCCTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR TCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTTGCTGCCCACTACCTTaGGGAAAGCCCTTTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: GMYLRLIWWTTCPSTLSICCPLP*GKPFSH Trigger: ATGTGAAAAGGGCTTTCCTCAAGGTAGTGGGCAGCA...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTAGAGGAGAAGAAAGATaGCAAACAGAATGCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: RGFKMSEIRHPDITYCLCRGEER*QTECHL Trigger: TAAATGGCATTCTGTTTGGCATCTTTCTTCTCCTCT...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR GCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTAGATGCCAAACAGAATaGCATTTATCTGTGTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: GMYLRLIWWTTCPSTLSIRCQTE*HLSVCY Trigger: GTAACACACAGATAAATGGCATTCTGTTTGGCATCT...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CCA 90 bp | GGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACATTGAGTATTATCCAACATAGGATATaGTCTTCTTCTTACAGACCA | + |
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Preference number: 4 (lower is better) Translates to: GMYLRLIWWTTCPSTLSIIQHRI*SSSYRP Trigger: TGGTCTGTAAGAAGAAGACCATATCCTATGTTGGAT...AATACTCAATGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS CCA 90 bp | GGCAGAGATGACGTTGTAGAAGAGAGCCAACTTCTTGTCCTCTTCTaGGGAGGACTCAGAGCCAGGCCTCATATACATAACCATACACGG | + |
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Preference number: 5 (lower is better) Translates to: GRDDVVEESQLLVLF*GGLRARPHIHNHTR Trigger: CCGTGTATGGTTATGTATATGAGGCCTGGCTCTGAGTCCTCCCCAGAAGAGGACAAGAAGTTGGCTCTCTTCTACAACGTCATCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102666.5 ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | TGGAAGACTCCCCCTTTACAGAAAGCTGCATGGAGACTGTTCCAGGAGGCTGCTGGACTCATGATGACTTaGTATCTGAGGGGATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: WKTPPLQKAAWRLFQEAAGLMMT*YLRGWQ Trigger: TTGCCATCCCCTCAGATACAAAGTCATCATGAGTCC...AGCAGCCTCCTGGAACAGTCTCCATGCAGCTTTCTGTAAAGGGGGAGTCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | ATGCTGGGAATCAAATCTGGGTTTCCTGGAAGAGCAGCCAGTGCTCTTAACGACAAGAGAGCCAACTTCTaGTCCTCTTCTGGGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: MLGIKSGFPGRAASALNDKRANF*SSSGED Trigger: GTCCTCCCCAGAAGAGGACAAGAAGTTGGCTCTCTT...GTCGTTAAGAGCACTGGCTGCTCTTCCAGGAAACCCAGATTTGATTCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | AGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCAGTGCTGCACTGCTGCCCACTACCTaGAGGAAAGCCCTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: SGNPGLHPSRIVRILSAALLPTT*RKALFT Trigger: TGTGAAAAGGGCTTTCCTCAAGGTAGTGGGCAGCAG...TGCAGCACTGAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTAAGTCTACCTGGTCATaGAGAGAGGTGTCTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: RGFKMSEIRHPDITYCLCKSTWS*REVSAQ Trigger: CTGCGCAGACACCTCTCTCAATGACCAGGTAGACTT...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | TGTTTTCAAAGCGGTAACCCTGGCTTACATCCTTCCAGGATTGTAAGGATTCTCCTGCTGCCCACTACCTaGAGGAAAGCCCTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: CFQSGNPGLHPSRIVRILLLPTT*RKALFT Trigger: TGTGAAAAGGGCTTTCCTCAAGGTAGTGGGCAGCAG...GAGAATCCTTACAATCCTGGAAGGATGTAAGCCAGGGTTACCGCTTTGAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTTTTAAGATGAGTGAAATCAGACACCCTGACATCACATACTGCCTCTGTGGACTCATGATGACTTaGTATCTGAGGGGATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RGFKMSEIRHPDITYCLCGLMMT*YLRGWQ Trigger: TTGCCATCCCCTCAGATACAAAGTCATCATGAGTCC...ACAGAGGCAGTATGTGATGTCAGGGTGTCTGATTTCACTCATCTTAAAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTTTAGGTATGTATCTGAGATTAATATGGTGGACCACATGTCCCTCTACAAAGTCTACCTGGTCATaGAGAGAGGTGTCTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLLGMYLRLIWWTTCPSTKSTWS*REVSAQ Trigger: CTGCGCAGACACCTCTCTCAATGACCAGGTAGACTT...TGTAGAGGGACATGTGGTCCACCATATTAATCTCAGATACATACCTAAAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS TCA 72 bp | ACAGGTGATACCCCAGAACCCACAGAAGGCTACCAGTaGCCCACGCAGCAAAGGACTCATGATGACTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TGDTPEPTEGYQ*PTQQRTHDDFV Trigger: TACAAAGTCATCATGAGTCCTTTGCTGCGTGGGTCACTGGTAGCCTTCTGTGGGTTCTGGGGTATCACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102666.5 ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS CCA 72 bp | GACGTTGTAGAAGAGAGCCAACTTCTTGTCCTCTTCTaGGGAGGACTCAGAGCCAGGCCTCATATACATAAC | + |
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Preference number: 6 (lower is better) Translates to: DVVEESQLLVLF*GGLRARPHIHN Trigger: GTTATGTATATGAGGCCTGGCTCTGAGTCCTCCCCAGAAGAGGACAAGAAGTTGGCTCTCTTCTACAACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102666.5 ENSMUST00000213189.3 ENSMUST00000217013.2 |
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| CDS CCA 72 bp | AGATGTACATCTGAGCCACACATCCAACATAGGATATaGTCTTCTTCTTACAGACCAGATGTACCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: RCTSEPHIQHRI*SSSYRPDVPAS Trigger: AGATGCTGGTACATCTGGTCTGTAAGAAGAAGACCATATCCTATGTTGGATGTGTGGCTCAGATGTACATCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102666.5 ENSMUST00000213189.3 ENSMUST00000217013.2 |
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