Pregenerated sensors for OLFR617 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073946Ensembl transcript IDs: ENSMUST00000048265.5, ENSMUST00000215755.2, ENSMUST00000216516.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTTCTGCAGTTTGCAGTaGCATCACACAATGGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEFCSLQ*HHTMAK Trigger: TTTGGCCATTGTGTGATGGCACTGCAAACTGCAGAA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGGTATGTATTGCTCTATaGGAATTCTGCAGTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEVCIAL*EFCSLQ Trigger: CTGCAAACTGCAGAATTCTCATAGAGCAATACATAC...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGACATCATTACTGATGTaGACAAGTACACAGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: ILSVVTKSTIPKYHFFSETSLLM*TSTQRL Trigger: TAGCCTCTGTGTACTTGTTCACATCAGTAATGATGT...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTCCATTTCCCAGTTTTaGAAAAATGGAATGCATTGG | + |
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Preference number: 2 (lower is better) Translates to: ILSVVTKSTIPKYHFFSESISQF*KNGMHW Trigger: CCAATGCATTCCATTTTTCCAAAACTGGGAAATGGA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR CAA 90 bp | CATTTTATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTaGTCTGTTTGTCTACCTACCCATCCATCAATGCAAATTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: HFIPGTRLEVLCRTF*SVCLPTHPSMQIVD Trigger: ATCTACAATTTGCATTGATGGATGGGTAGGTAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTATAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATCCATTTCCCAGTTTTaGAAAAATGGAATGCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLSISQF*KNGMHW Trigger: CCAATGCATTCCATTTTTCCAAAACTGGGAAATGGA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGGACATTCTTGTCTGTTaGTCTACCTACCCATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEDILVC*STYPSI Trigger: GATGGATGGGTAGGTAGACAAACAGACAAGAATGTC...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTTATATGAACAAGGCTaGTATCTCTTTCCCCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ILSVVTKSTIPKYHFFSELYEQG*YLFPPD Trigger: ATCAGGGGGAAAGAGATACAAGCCTTGTTCATATAA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTTATGTAGGACATTCTaGTCTGTTTGTCTACCTACC | + |
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Preference number: 3 (lower is better) Translates to: ILSVVTKSTIPKYHFFSELCRTF*SVCLPT Trigger: GGTAGGTAGACAAACAGACAAGAATGTCCTACATAA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR TCA 72 bp | ATCATACTGTTACCACTAATTGTATGTATTGCTCTATaGGAATTCTGCAGTTTGCAGTGCCATCACACAATG | + |
|
Preference number: 3 (lower is better) Translates to: IILLPLIVCIAL*EFCSLQCHHTM Trigger: CATTGTGTGATGGCACTGCAAACTGCAGAATTCTCATAGAGCAATACATACAATTAGTGGTAACAGTATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATTATATGAACAAGGCTaGTATCTCTTTCCCCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLLYEQG*YLFPPD Trigger: ATCAGGGGGAAAGAGATACAAGCCTTGTTCATATAA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTTCCATTTCCCAGTTTaGGAAAAATGGAATGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEFHFPV*EKWNAL Trigger: CAATGCATTCCATTTTTCCAAAACTGGGAAATGGAA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR-3UTR CAA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATTCCATTTCCCAGTTTaGGAAAAATGGAATGCATTG | + |
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Preference number: 3 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLFHFPV*EKWNAL Trigger: CAATGCATTCCATTTTTCCAAAACTGGGAAATGGAA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| 3UTR GCA 72 bp | GATAGATATCATACTGTTACCACTAATTGTATGTATTaGTCTATGAGAATTCTGCAGTTTGCAGTGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: DRYHTVTTNCMY*SMRILQFAVPS Trigger: TGATGGCACTGCAAACTGCAGAATTCTCATAGAGCAATACATACAATTAGTGGTAACAGTATGATATCTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTGTTCACAGTATGAGTaGCGAATGGTGCTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSECSQYE*RMVLFP Trigger: TGGGAAGAGCACCATTCGTCACTCATACTGTGAACA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR GCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGCAGTATGGCAGACTCTaGCACAAATATGAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEQYGRL*HKYEVE Trigger: CTCCACTTCATATTTGTGGCAGAGTCTGCCATACTG...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGGTGCATTGCCTGCAATaGCCACTATGTACATTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEVHCLQ*PLCTLN Trigger: GTTCAATGTACATAGTGGCCATTGCAGGCAATGCAC...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGCTGCATCTAGGCATGTaGAAAACAGAGCCACTATCA | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSELHLGM*KTEPLS Trigger: TGATAGTGGCTCTGTTTTCCACATGCCTAGATGCAG...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAGGGGTTGACAGAGGGTaGTACTACCACATACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLGVDRG*YYHIQI Trigger: AATCTGTATGTGGTAGTACCACCCTCTGTCAACCCC...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTGGAGGAAGAACATCTaGGATACACAGCTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEWRKNI*DTQLAK Trigger: TTTTGCTAGCTGTGTATCTCAGATGTTCTTCCTCCA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGACTCTGCCACAAATATaGAGTGGAGGAAGAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSETLPQI*SGGRTS Trigger: AGATGTTCTTCCTCCACTTCATATTTGTGGCAGAGT...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR GCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTACAGTATGGCAGACTCTaGCACAAATATGAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLQYGRL*HKYEVE Trigger: CTCCACTTCATATTTGTGGCAGAGTCTGCCATACTG...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAGTGCATTGCCTGCAATaGCCACTATGTACATTGAAC | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLVHCLQ*PLCTLN Trigger: GTTCAATGTACATAGTGGCCATTGCAGGCAATGCAC...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGAATGTGCACATGCAATaGTATACTGTGACCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSENVHMQ*YTVTPK Trigger: TTTGGGGGTCACAGTATACCATTGCATGTGCACATT...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATGGAGGAAGAACATCTaGGATACACAGCTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLWRKNI*DTQLAK Trigger: TTTTGCTAGCTGTGTATCTCAGATGTTCTTCCTCCA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAACTCTGCCACAAATATaGAGTGGAGGAAGAACATCT | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLTLPQI*SGGRTS Trigger: AGATGTTCTTCCTCCACTTCATATTTGTGGCAGAGT...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR TCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTGGATAACCCTCTCCTaGATTTGTTTAGTCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEWITLS*ICLVFT Trigger: AGTGAAGACTAAACAAATTCAGGAGAGGGTTATCCA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR GCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGGCTTCTAATCACAGCTaGAATGCCCATTTTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEASNHS*NAHFDD Trigger: ATCATCAAAATGGGCATTGCAGCTGTGATTAGAAGC...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTGTACATTGAACAGATaGGGATGGAGATCCATATGT | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSECTLNR*GWRSIC Trigger: ACATATGGATCTCCATCCCCATCTGTTCAATGTACA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAAATGTGCACATGCAATaGTATACTGTGACCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLNVHMQ*YTVTPK Trigger: TTTGGGGGTCACAGTATACCATTGCATGTGCACATT...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR GCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAAAAGATATCAGCGAGTaGCAACATAGACAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLKDISE*QHRQEK Trigger: CTTTTCCTGTCTATGTTGGCACTCGCTGATATCTTT...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR GCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATTGGCAAGAAGAATGTaGACATGCAATGGTATACTG | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLLARRM*TCNGIL Trigger: CAGTATACCATTGCATGTGCACATTCTTCTTGCCAA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGATGTGGTTAGAATGGTaGTGTATCTTAGTGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEMWLEW*CILVDN Trigger: GTTATCCACTAAGATACACCACCATTCTAACCACAT...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CCA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAATGTGGTTAGAATGGTaGTGTATCTTAGTGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLMWLEW*CILVDN Trigger: GTTATCCACTAAGATACACCACCATTCTAACCACAT...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGTGGCCACTATGTACATaGAACAGATGGGGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ILSVVTKSTIPKYHFFSEWPLCT*NRWGWR Trigger: TCTCCATCCCCATCTGTTCAATGTACATAGTGGCCA...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CAA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTATGGCCACTATGTACATaGAACAGATGGGGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLWPLCT*NRWGWR Trigger: TCTCCATCCCCATCTGTTCAATGTACATAGTGGCCA...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CAA 90 bp | ATTCTGTCTGTTGTCACAAAATCAACAATCCCCAAATATCACTTCTTCAGTGAGAATAATAGCAGTGCATaGCCTGCAATGGCCACTATG | + |
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Preference number: 5 (lower is better) Translates to: ILSVVTKSTIPKYHFFSENNSSA*PAMATM Trigger: CATAGTGGCCATTGCAGGCAATGCACTGCTATTATT...CTCACTGAAGAAGTGATATTTGGGGATTGTTGATTTTGTGACAACAGACAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CAA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAAATAATAGCAGTGCATaGCCTGCAATGGCCACTATG | + |
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Preference number: 5 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLNNSSA*PAMATM Trigger: CATAGTGGCCATTGCAGGCAATGCACTGCTATTATT...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS-3UTR CAA 90 bp | ATACCTGGCACTAGATTAGAAGTTTTATGTAGGACATTCTTGTCTGTTTGTCTAGCTGCAATGCCCATTTaGATGATGACAGATGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: IPGTRLEVLCRTFLSVCLAAMPI*MMTDVV Trigger: AACCACATCTGTCATCATCAAAATGGGCATTGCAGC...TAGACAAACAGACAAGAATGTCCTACATAAAACTTCTAATCTAGTGCCAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS TCA 72 bp | AGTATGAGTGACGAATGGTGCTCTTCCCACAATAGGTaGGCCTATAGACAAGAAAGATCAGGGGGAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SMSDEWCSSHNR*AYRQERSGGSR Trigger: TCTGCTTCCCCCTGATCTTTCTTGTCTATAGGCTCACCTATTGTGGGAAGAGCACCATTCGTCACTCATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048265.5 ENSMUST00000215755.2 ENSMUST00000216516.2 |
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| CDS CAA 90 bp | GGGAAGCAGATGAAGAAGCTTCTAATCACAGCTGCAATGCCCATTTaGATGATGACAGATGTGGTTAGAATGGTGGTGTATCTTAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GKQMKKLLITAAMPI*MMTDVVRMVVYLSG Trigger: TCCACTAAGATACACCACCATTCTAACCACATCTGTCATCATCAAAATGGGCATTGCAGCTGTGATTAGAAGCTTCTTCATCTGCTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048265.5 ENSMUST00000215755.2 ENSMUST00000216516.2 |
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