Pregenerated sensors for OLFR616 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047544Ensembl transcript IDs: ENSMUST00000106886.2, ENSMUST00000214806.2, ENSMUST00000217293.2
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTCACAGGCCAGCTTCATaGTGTCTGGATGGTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSHRPAS*CLDGSS Trigger: ACTGCTACCATCCAGACATCATGAAGCTGGCCTGTG...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR TCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTGGGCAATTAGGTACATaGCACATAGTGGGATACAGA | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSGQLGT*HIVGYR Trigger: TCTGTATCCCACTATGTGTCATGTACCTAATTGCCC...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTTTGGCCATGGTGACATaGAGAAGAGGAGATGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSLAMVT*RRGDAN Trigger: ATTTGCATCTCCTCTTCTCCATGTCACCATGGCCAA...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR GCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTATACAGAACCATATCTaGACATCTTCTAGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSIQNHI*TSSSPG Trigger: CCCTGGACTAGAAGATGTGCAGATATGGTTCTGTAT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR GCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTATGGAGAAGAGGAGATaGAAATGTACCAAACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSMEKRR*KCTKPV Trigger: CACAGGTTTGGTACATTTGCATCTCCTCTTCTCCAT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTCAGCTTCATGATGTCTaGATGGTAGCAGTAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSQLHDV*MVAVTM Trigger: CATTGTTACTGCTACCATCCAGACATCATGAAGCTG...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR TCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTAACTCAATATCTCTGTaGTTCAGGAGGAAGACATTC | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSNSISL*FRRKTF Trigger: GAATGTCTTCCTCCTGAATCACAGAGATATTGAGTT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR GCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTACCCCTAACAACAGCTaGAAGTCCTATCTTAATAAT | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSTPNNS*KSYLNN Trigger: ATTATTAAGATAGGACTTGCAGCTGTTGTTAGGGGT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTAAGACAGTAAATATGTaGGAGACACAGGTATTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSKTVNM*ETQVLS Trigger: ACTCAATACCTGTGTCTCCCACATATTTACTGTCTT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CCA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTCAGACCTTATCTGTTTaGTTTTTAAGCTGTAAACCA | + |
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Preference number: 4 (lower is better) Translates to: KHIPEKQIDERAEKYDTSQTLSV*FLSCKP Trigger: TGGTTTACAGCTTAAAAACCAAACAGATAAGGTCTG...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CAA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTCAGAAAGGCAACCGCTaGAGCAGGATTGGCAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: KHIPEKQIDERAEKYDTSQKGNR*SRIGKG Trigger: CCCCTTGCCAATCCTGCTCAAGCGGTTGCCTTTCTG...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS GCA 90 bp | AGGGCAATTAGGTACATGACACATAGTGGGATACAGAACCATATCTaGACATCTTCTAGTCCAGGGATGCCTGTTAGAAGAAGGGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: RAIRYMTHSGIQNHI*TSSSPGMPVRRRVG Trigger: ACCTACCCTTCTTCTAACAGGCATCCCTGGACTAGAAGATGTGCAGATATGGTTCTGTATCCCACTATGTGTCATGTACCTAATTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106886.2 ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CAA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTCAGGTATTGAGTGCCTaGAGCTTACCATCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: KHIPEKQIDERAEKYDTSQVLSA*SLPSPE Trigger: CTCAGGAGATGGTAAGCTCAAGGCACTCAATACCTG...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CAA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTAGGCTGGAGGTGGTTTaGATAACAAAGAGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: KHIPEKQIDERAEKYDTSRLEVV*ITKRMV Trigger: CACCATCCTCTTTGTTATCAAAACCACCTCCAGCCT...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS-3UTR CAA 90 bp | AAGCATATTCCTGAGAAGCAAATAGATGAAAGAGCAGAGAAGTATGACACCTCTGTACTGTCGGCAGAGTaGATACAGAGAGACCAACAT | + |
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Preference number: 5 (lower is better) Translates to: KHIPEKQIDERAEKYDTSVLSAE*IQRDQH Trigger: ATGTTGGTCTCTCTGTATCAACTCTGCCGACAGTAC...AGAGGTGTCATACTTCTCTGCTCTTTCATCTATTTGCTTCTCAGGAATATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS CAA 72 bp | TGGGACAGTATGACACCCTTACAGAAAGGCAACCGCTaGAGCAGGATTGGCAAGGGGATCATTAACATCACA | + |
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Preference number: 6 (lower is better) Translates to: WDSMTPLQKGNR*SRIGKGIINIT Trigger: TGTGATGTTAATGATCCCCTTGCCAATCCTGCTCAAGCGGTTGCCTTTCTGTAAGGGTGTCATACTGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106886.2 ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS TCA 72 bp | ATTCAGGAGGAAGACATTCAGTACTGTCGGCAGAGTTaGTACAGAGAGACCAACATCTGTAGCTGCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: IQEEDIQYCRQS*YRETNICSCQH Trigger: ATGTTGGCAGCTACAGATGTTGGTCTCTCTGTATCAACTCTGCCGACAGTACTGAATGTCTTCCTCCTGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106886.2 ENSMUST00000214806.2 ENSMUST00000217293.2 |
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| CDS TCA 72 bp | GACACAGGTATTGAGTGCCTTGAGCTTACCATCTCCTaGGGCGATACCCAGCACTGTTTTCAAAATCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: DTGIECLELTIS*GDTQHCFQNQD Trigger: ATCTTGATTTTGAAAACAGTGCTGGGTATCGCCTCAGGAGATGGTAAGCTCAAGGCACTCAATACCTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106886.2 ENSMUST00000214806.2 ENSMUST00000217293.2 |
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