Pregenerated sensors for OLFR615 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073947Ensembl transcript IDs: ENSMUST00000098198.3, ENSMUST00000214345.2, ENSMUST00000215673.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAAGCAAGGCAAACACAGGCCTGAGCATGTCAAACATTGCATATaGGGTTTTTGCCCTTTTACTCCTCCCTCTTCCCATGCCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SKQGKHRPEHVKHCI*GFCPFTPPSSHAFL Trigger: AAGGAAGGCATGGGAAGAGGGAGGAGTAAAAGGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCCTTGCTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR GCA 90 bp | ACCCTGGTTTTCATGTCTTTGAAGACTATTGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAGCACAAGCAAGCTTCTCAAAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: TLVFMSLKTIAKKNI*MCSSEEHKQASQSD Trigger: GTCACTTTGAGAAGCTTGCTTGTGCTCTTCAGATGAACACATGCATATGTTCTTCTTAGCAATAGTCTTCAAAGACATGAAAACCAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGACTAATGGGATGCTATaGCCCACACACTCTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: PHLPSVVIKLLWVMNLCLTNGML*PTHSVA Trigger: TGCTACAGAGTGTGTGGGTCATAGCATCCCATTAGT...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCATGCATGTGTTCATCTaGAGAGCACAAGCAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPMHVFI*RAQASF Trigger: GAAGCTTGCTTGTGCTCTTCAGATGAACACATGCAT...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTTTGCTTCTGCTTGCTaGTATGCCTGCCTTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: WKHSKCQSERRHLNVHQHFASAC*YACLCN Trigger: ATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCCAGGTGTTCTGTAACTaGGGAAAATCAAAGACACAA | + |
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Preference number: 2 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPQVFCN*GKSKTQ Trigger: TTGTGTCTTTGATTTTCCCCAGTTACAGAACACCTG...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR TCA 90 bp | TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCATGCATGTGTTCATCTaGAGAGCACAAGCAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: YRISSGGSTANVNQRGDIMHVFI*RAQASF Trigger: GAAGCTTGCTTGTGCTCTTCAGATGAACACATGCAT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTCACTGGACCAACAGTaGGTTTCTTCTCAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: WKHSKCQSERRHLNVHQHSLDQQ*VSSQWN Trigger: ATTCCATTGAGAAGAAACTCACTGTTGGTCCAGTGA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPAKKNI*MCSSEE Trigger: CTCTTCAGATGAACACATGCATATGTTCTTCTTAGC...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PHLPSVVIKLLWVMNLCLAKKNI*MCSSEE Trigger: CTCTTCAGATGAACACATGCATATGTTCTTCTTAGC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPVIKLL*VMNLCL Trigger: CAGGCACAAATTCATTACCCAAAGGAGTTTTATTAC...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTTAAAATACTTTCCTTaGGATACACAGCTGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: WKHSKCQSERRHLNVHQHLKYFP*DTQLLS Trigger: TGAGAGCAGCTGTGTATCCCAAGGAAAGTATTTTAA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCACTAATGGGATGCTATaGCCCACACACTCTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: QYIPILSPGEVRNMEFSPTNGML*PTHSVA Trigger: TGCTACAGAGTGTGTGGGTCATAGCATCCCATTAGT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTCTTTTGCTTCTGCTTaGTGCTATGCCTGCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: DVAEYPLIQLSFYCIYLESFASA*CYACLC Trigger: GCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: WKHSKCQSERRHLNVHQHVIKLL*VMNLCL Trigger: CAGGCACAAATTCATTACCCAAAGGAGTTTTATTAC...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGGGTAATGAATTTGTaGCTGGGTATGTCCTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: DVAEYPLIQLSFYCIYLEWVMNL*LGMSCM Trigger: CATACAGGACATACCCAGGCACAAATTCATTACCCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR CAA 90 bp | AGTTCACTGACACAAAACACCAAGGTAATTTATCAATTTCATTATTaGGTTAATATGTCCAACCATGACATGCCAAGCCATCTTAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: SSLTQNTKVIYQFHY*VNMSNHDMPSHLST Trigger: TGTGCTAAGATGGCTTGGCATGTCATGGTTGGACATATTAACCAAATAATGAAATTGATAAATTACCTTGGTGTTTTGTGTCAGTGAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGCTAAAAAGATGTACATaGAGATCCAGGAGTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: DVAEYPLIQLSFYCIYLELKRCT*RSRSIF Trigger: GAAAATACTCCTGGATCTGCATGTACATCTTTTTAG...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR TCA 72 bp | AGGCTCCAACAGTTCCAAGCAAGGCAAACACAGGCCTaGGCATGTCAAACATTGCATATGGGGTTTTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLQQFQARQTQA*ACQTLHMGFLP Trigger: GGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCCTTGCTTGGAACTGTTGGAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR CCA 72 bp | GGCAAACACAGGCCTGAGCATGTCAAACATTGCATATaGGGTTTTTGCCCTTTTACTCCTCCCTCTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GKHRPEHVKHCI*GFCPFTPPSSH Trigger: ATGGGAAGAGGGAGGAGTAAAAGGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCCACCCCCACCCCCACTaGCCTTCCGTGGTAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: YRISSGGSTANVNQRGDIHPHPH*PSVVIK Trigger: TTTTATTACCACGGAAGGCAAGTGGGGGTGGGGGTG...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR CCA 72 bp | CACCCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTGGGTATGTCCTGTATG | + |
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Preference number: 3 (lower is better) Translates to: HPHLPSVVIKLL*VMNLCLGMSCM Trigger: CATACAGGACATACCCAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCCTAGCTAACAATGGTTaGAGCTATAGGAAATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPLANNG*SYRKSE Trigger: TTCTGATTTCCTATAGCTCAAACCATTGTTAGCTAG...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTGGTAATAAAACTCCTTaGGGTAATGAATTTGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: DMPSHLSTDSPFPLKLTSGNKTP*GNEFVP Trigger: AGGCACAAATTCATTACCCAAAGGAGTTTTATTACC...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGCATCTTTGTTCTTTaGCTTCTGCTTGCTGCTATG | + |
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Preference number: 3 (lower is better) Translates to: DVAEYPLIQLSFYCIYLECIFVL*LLLAAM Trigger: CATAGCAGCAAGCAGAAGCAAAAGAACAAAGATGCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR TCA 72 bp | CCACCTATCAAGTTGGCATTTTCTGGTGGACGTAGCTaGGTATCCTTTGATTCAACTAAGTTTTTATTGTAT | + |
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Preference number: 3 (lower is better) Translates to: PPIKLAFSGGRS*VSFDSTKFLLY Trigger: ATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTCCACCAGAAAATGCCAACTTGATAGGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCCTGGTTTTCATGTCTTaGAAGACTATTGCTAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: QYIPILSPGEVRNMEFSPLVFMS*KTIAKK Trigger: CTTCTTAGCAATAGTCTTCAAAGACATGAAAACCAG...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR-3UTR CAA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGCATCTATTTGCATCTTaGTTCTTTTGCTTCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: DVAEYPLIQLSFYCIYLEHLFAS*FFCFCL Trigger: CAAGCAGAAGCAAAAGAACAAAGATGCAAATAGATG...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR TCA 90 bp | GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTTTGAGCGCTTTCATCTaGCCTTCTCTAGAAGCGATC | + |
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Preference number: 4 (lower is better) Translates to: DMPSHLSTDSPFPLKLTSLSAFI*PSLEAI Trigger: GATCGCTTCTAGAGAAGGTCAGATGAAAGCGCTCAA...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTCCCAGGACTGCATGTaGTATTGGAGAACTTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: WKHSKCQSERRHLNVHQHSQDCM*YWRTSA Trigger: CGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR TCA 90 bp | TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTGGATGAAGAAGAGCTaGGCAAGGCAACTGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: WKHSKCQSERRHLNVHQHWMKKS*ARQLSN Trigger: ATTTGACAGTTGCCTTGCTCAGCTCTTCTTCATCCA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCAGCGATCCCCATAACTaGTTGAAATATCAGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: SLFFCFCLLLCLPLQFHPSDPHN*LKYQSI Trigger: TATGCTCTGATATTTCAAGCAGTTATGGGGATCGCT...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGATATTTCCCAGGACTaGATGTGCTATTGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: PHLPSVVIKLLWVMNLCLDISQD*MCYWRT Trigger: AGTTCTCCAATAGCACATGCAGTCCTGGGAAATATC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR TCA 90 bp | TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCAAGAAGATGTATGGATaGAGAAGAGCTGAGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: YRISSGGSTANVNQRGDIKKMYG*RRAEQG Trigger: GCCTTGCTCAGCTCTTCTTCATCCATACATCTTCTT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCGATATTTCCCAGGACTaGATGTGCTATTGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: YRISSGGSTANVNQRGDIDISQD*MCYWRT Trigger: AGTTCTCCAATAGCACATGCAGTCCTGGGAAATATC...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | GGGAAAATCAAAGACACAAAACTAGCTAACAATGGTTTGAGCTATAGGAAATCATCCCAGGACTGCATGTaGTATTGGAGAACTTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: GKIKDTKLANNGLSYRKSSQDCM*YWRTSA Trigger: CGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGA...TGATTTCCTATAGCTCAAACCATTGTTAGCTAGTTTTGTGTCTTTGATTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR CCA 90 bp | CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGAATTGGGTTAAGCATTaGGGGCATAAAAAGATAGAT | + |
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Preference number: 4 (lower is better) Translates to: PHLPSVVIKLLWVMNLCLNWVKH*GHKKID Trigger: ATCTATCTTTTTATGCCCCCAATGCTTAACCCAATT...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR TCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGGATGAAGAAGAGCTaGGCAAGGCAACTGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: DVAEYPLIQLSFYCIYLEWMKKS*ARQLSN Trigger: ATTTGACAGTTGCCTTGCTCAGCTCTTCTTCATCCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR TCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGAAGAAGATGTATGGATaGAGAAGAGCTGAGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: DVAEYPLIQLSFYCIYLEKKMYG*RRAEQG Trigger: GCCTTGCTCAGCTCTTCTTCATCCATACATCTTCTT...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCAAGGCAACTGTCAAATaGAATTTCATAGAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: YRISSGGSTANVNQRGDIKATVK*NFIEVK Trigger: TTTGACCTCTATGAAATTGCATTTGACAGTTGCCTT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| 3UTR CAA 72 bp | AGTTGGCATTTTCTGGTGGACGTAGCTGAGTATCCTTaGATTCAACTAAGTTTTTATTGTATCTACCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SWHFLVDVAEYP*IQLSFYCIYLE Trigger: CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTCCACCAGAAAATGCCAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCAGCGATCCCCATAACTaGTTGAAATATCAGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: QYIPILSPGEVRNMEFSPSDPHN*LKYQSI Trigger: TATGCTCTGATATTTCAAGCAGTTATGGGGATCGCT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGATGCATTACAGTTATTaGCAGCAAAGGGCCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: DVAEYPLIQLSFYCIYLEMHYSY*QQRAIV Trigger: TACTATGGCCCTTTGCTGGCAATAACTGTAATGCAT...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR GCA 90 bp | CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCAAGGCAACTGTCAAATaGAATTTCATAGAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: QYIPILSPGEVRNMEFSPKATVK*NFIEVK Trigger: TTTGACCTCTATGAAATTGCATTTGACAGTTGCCTT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS CCA 90 bp | AGTACAGTTCCCTGCCAATGTGGTGATGTACATCAGGCTCAGGAGTaGTCCCAGCCACAGGCGGGCACCCACCAGCCCTCTGAGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: STVPCQCGDVHQAQE*SQPQAGTHQPSEAS Trigger: ACTGGCCTCAGAGGGCTGGTGGGTGCCCGCCTGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGGAACTGTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR CAA 90 bp | CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGACAACAGCTGCCCCTaGCAGAATGGTAATCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: PHLPSVVIKLLWVMNLCLDNSCP*QNGNLL Trigger: TAAGAGATTACCATTCTGCAAGGGGCAGCTGTTGTC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR CAA 90 bp | GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTGACAACAGCTGCCCCTaGCAGAATGGTAATCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: DMPSHLSTDSPFPLKLTSDNSCP*QNGNLL Trigger: TAAGAGATTACCATTCTGCAAGGGGCAGCTGTTGTC...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS GCA 90 bp | TGGGTTAAGCATTGGGGGCATAAAAAGATAGATATTTCCCAGGACTaGATGTGCTATTGGAGAACTTCTGCGGCTGATCCGATGCATTAC | + |
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Preference number: 5 (lower is better) Translates to: WVKHWGHKKIDISQD*MCYWRTSAADPMHY Trigger: GTAATGCATCGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGAAATATCTATCTTTTTATGCCCCCAATGCTTAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR CAA 90 bp | CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCGATGCATTACAGTTATaGCCAGCAAAGGGCCATAGT | + |
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Preference number: 5 (lower is better) Translates to: QYIPILSPGEVRNMEFSPDALQL*PAKGHS Trigger: ACTATGGCCCTTTGCTGGCAATAACTGTAATGCATC...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS-3UTR CAA 90 bp | GGGAAAATCAAAGACACAAAACTAGCTAACAATGGTTTGAGCTATAGGAAATCAGATGCATTACAGTTATaGCCAGCAAAGGGCCATAGT | + |
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Preference number: 5 (lower is better) Translates to: GKIKDTKLANNGLSYRKSDALQL*PAKGHS Trigger: ACTATGGCCCTTTGCTGGCAATAACTGTAATGCATC...TGATTTCCTATAGCTCAAACCATTGTTAGCTAGTTTTGTGTCTTTGATTTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS CCA 72 bp | CCCTGCCAATGTGGTGATGTACATCAGGCTCAGGAGTaGTCCCAGCCACAGGCGGGCACCCACCAGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PCQCGDVHQAQE*SQPQAGTHQPS Trigger: AGAGGGCTGGTGGGTGCCCGCCTGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS TCA 72 bp | CCTCAGAAAAGCTGCCAGTCCCATCCTGGTGACTCGTaGGTTCGTCAGTATTGTTGTATATTGCAGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PQKSCQSHPGDS*VRQYCCILQGV Trigger: CACCCCCTGCAATATACAACAATACTGACGAACTCACGAGTCACCAGGATGGGACTGGCAGCTTTTCTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS TCA 72 bp | CCAGGACTGCATGTGCTATTGGAGAACTTCTGCGGCTaGTCCGATGCATTACAGTTATTGCCAGCAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PGLHVLLENFCG*SDALQLLPAKG Trigger: GCCCTTTGCTGGCAATAACTGTAATGCATCGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS TCA 72 bp | CTACACCCCTCAGAAAAGCTGCCAGTCCCATCCTGGTaGCTCGTGAGTTCGTCAGTATTGTTGTATATTGCA | + |
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Preference number: 6 (lower is better) Translates to: LHPSEKLPVPSW*LVSSSVLLYIA Trigger: TGCAATATACAACAATACTGACGAACTCACGAGTCACCAGGATGGGACTGGCAGCTTTTCTGAGGGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS TCA 72 bp | CTAAATAAATTACAGTACAGTTCCCTGCCAATGTGGTaGTGTACATCAGGCTCAGGAGTGGTCCCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LNKLQYSSLPMW*CTSGSGVVPAT Trigger: TGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGGAACTGTACTGTAATTTATTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS TCA 72 bp | ATGTCAGCCCCAGCCAGCATAGACAAAAATTGGTACTaGGGCTCCTGCAGACTCCTTTCAGTCCTTACTAAA | + |
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Preference number: 6 (lower is better) Translates to: MSAPASIDKNWY*GSCRLLSVLTK Trigger: TTTAGTAAGGACTGAAAGGAGTCTGCAGGAGCCTCAGTACCAATTTTTGTCTATGCTGGCTGGGGCTGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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| CDS GCA 72 bp | CATTGGGGGCATAAAAAGATAGATATTTCCCAGGACTaGATGTGCTATTGGAGAACTTCTGCGGCTGATCCG | + |
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Preference number: 6 (lower is better) Translates to: HWGHKKIDISQD*MCYWRTSAADP Trigger: CGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGAAATATCTATCTTTTTATGCCCCCAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098198.3 ENSMUST00000214345.2 ENSMUST00000215673.2 |
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