RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR615 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073947

Ensembl transcript IDs: ENSMUST00000098198.3, ENSMUST00000214345.2, ENSMUST00000215673.2

Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAAGCAAGGCAAACACAGGCCTGAGCATGTCAAACATTGCATATaGGGTTTTTGCCCTTTTACTCCTCCCTCTTCCCATGCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: SKQGKHRPEHVKHCI*GFCPFTPPSSHAFL
Trigger: AAGGAAGGCATGGGAAGAGGGAGGAGTAAAAGGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCCTTGCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR GCA 90 bp ACCCTGGTTTTCATGTCTTTGAAGACTATTGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAGCACAAGCAAGCTTCTCAAAGTGAC +
Preference number: 1 (lower is better)
Translates to: TLVFMSLKTIAKKNI*MCSSEEHKQASQSD
Trigger: GTCACTTTGAGAAGCTTGCTTGTGCTCTTCAGATGAACACATGCATATGTTCTTCTTAGCAATAGTCTTCAAAGACATGAAAACCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR TCA 90 bp CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGACTAATGGGATGCTATaGCCCACACACTCTGTAGCA +
Preference number: 2 (lower is better)
Translates to: PHLPSVVIKLLWVMNLCLTNGML*PTHSVA
Trigger: TGCTACAGAGTGTGTGGGTCATAGCATCCCATTAGT...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR TCA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCATGCATGTGTTCATCTaGAGAGCACAAGCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPMHVFI*RAQASF
Trigger: GAAGCTTGCTTGTGCTCTTCAGATGAACACATGCAT...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTTTGCTTCTGCTTGCTaGTATGCCTGCCTTTGCAAT +
Preference number: 2 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHFASAC*YACLCN
Trigger: ATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CCA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCCAGGTGTTCTGTAACTaGGGAAAATCAAAGACACAA +
Preference number: 2 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPQVFCN*GKSKTQ
Trigger: TTGTGTCTTTGATTTTCCCCAGTTACAGAACACCTG...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR TCA 90 bp TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCATGCATGTGTTCATCTaGAGAGCACAAGCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: YRISSGGSTANVNQRGDIMHVFI*RAQASF
Trigger: GAAGCTTGCTTGTGCTCTTCAGATGAACACATGCAT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR TCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTCACTGGACCAACAGTaGGTTTCTTCTCAATGGAAT +
Preference number: 2 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHSLDQQ*VSSQWN
Trigger: ATTCCATTGAGAAGAAACTCACTGTTGGTCCAGTGA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPAKKNI*MCSSEE
Trigger: CTCTTCAGATGAACACATGCATATGTTCTTCTTAGC...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGCTAAGAAGAACATATaGATGTGTTCATCTGAAGAG +
Preference number: 2 (lower is better)
Translates to: PHLPSVVIKLLWVMNLCLAKKNI*MCSSEE
Trigger: CTCTTCAGATGAACACATGCATATGTTCTTCTTAGC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CCA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPVIKLL*VMNLCL
Trigger: CAGGCACAAATTCATTACCCAAAGGAGTTTTATTAC...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTTAAAATACTTTCCTTaGGATACACAGCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHLKYFP*DTQLLS
Trigger: TGAGAGCAGCTGTGTATCCCAAGGAAAGTATTTTAA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR TCA 90 bp CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCACTAATGGGATGCTATaGCCCACACACTCTGTAGCA +
Preference number: 2 (lower is better)
Translates to: QYIPILSPGEVRNMEFSPTNGML*PTHSVA
Trigger: TGCTACAGAGTGTGTGGGTCATAGCATCCCATTAGT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTCTTTTGCTTCTGCTTaGTGCTATGCCTGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLESFASA*CYACLC
Trigger: GCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHVIKLL*VMNLCL
Trigger: CAGGCACAAATTCATTACCCAAAGGAGTTTTATTAC...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGGGTAATGAATTTGTaGCTGGGTATGTCCTGTATG +
Preference number: 2 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLEWVMNL*LGMSCM
Trigger: CATACAGGACATACCCAGGCACAAATTCATTACCCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR CAA 90 bp AGTTCACTGACACAAAACACCAAGGTAATTTATCAATTTCATTATTaGGTTAATATGTCCAACCATGACATGCCAAGCCATCTTAGCACA +
Preference number: 2 (lower is better)
Translates to: SSLTQNTKVIYQFHY*VNMSNHDMPSHLST
Trigger: TGTGCTAAGATGGCTTGGCATGTCATGGTTGGACATATTAACCAAATAATGAAATTGATAAATTACCTTGGTGTTTTGTGTCAGTGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR GCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGCTAAAAAGATGTACATaGAGATCCAGGAGTATTTTC +
Preference number: 2 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLELKRCT*RSRSIF
Trigger: GAAAATACTCCTGGATCTGCATGTACATCTTTTTAG...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR TCA 72 bp AGGCTCCAACAGTTCCAAGCAAGGCAAACACAGGCCTaGGCATGTCAAACATTGCATATGGGGTTTTTGCCC +
Preference number: 3 (lower is better)
Translates to: RLQQFQARQTQA*ACQTLHMGFLP
Trigger: GGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCCTTGCTTGGAACTGTTGGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR CCA 72 bp GGCAAACACAGGCCTGAGCATGTCAAACATTGCATATaGGGTTTTTGCCCTTTTACTCCTCCCTCTTCCCAT +
Preference number: 3 (lower is better)
Translates to: GKHRPEHVKHCI*GFCPFTPPSSH
Trigger: ATGGGAAGAGGGAGGAGTAAAAGGGCAAAAACCCCATATGCAATGTTTGACATGCTCAGGCCTGTGTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCCACCCCCACCCCCACTaGCCTTCCGTGGTAATAAAA +
Preference number: 3 (lower is better)
Translates to: YRISSGGSTANVNQRGDIHPHPH*PSVVIK
Trigger: TTTTATTACCACGGAAGGCAAGTGGGGGTGGGGGTG...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR CCA 72 bp CACCCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTaGGTAATGAATTTGTGCCTGGGTATGTCCTGTATG +
Preference number: 3 (lower is better)
Translates to: HPHLPSVVIKLL*VMNLCLGMSCM
Trigger: CATACAGGACATACCCAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCCTAGCTAACAATGGTTaGAGCTATAGGAAATCAGAA +
Preference number: 3 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPLANNG*SYRKSE
Trigger: TTCTGATTTCCTATAGCTCAAACCATTGTTAGCTAG...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTGGTAATAAAACTCCTTaGGGTAATGAATTTGTGCCT +
Preference number: 3 (lower is better)
Translates to: DMPSHLSTDSPFPLKLTSGNKTP*GNEFVP
Trigger: AGGCACAAATTCATTACCCAAAGGAGTTTTATTACC...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGCATCTTTGTTCTTTaGCTTCTGCTTGCTGCTATG +
Preference number: 3 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLECIFVL*LLLAAM
Trigger: CATAGCAGCAAGCAGAAGCAAAAGAACAAAGATGCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR TCA 72 bp CCACCTATCAAGTTGGCATTTTCTGGTGGACGTAGCTaGGTATCCTTTGATTCAACTAAGTTTTTATTGTAT +
Preference number: 3 (lower is better)
Translates to: PPIKLAFSGGRS*VSFDSTKFLLY
Trigger: ATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTCCACCAGAAAATGCCAACTTGATAGGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCCTGGTTTTCATGTCTTaGAAGACTATTGCTAAGAAG +
Preference number: 3 (lower is better)
Translates to: QYIPILSPGEVRNMEFSPLVFMS*KTIAKK
Trigger: CTTCTTAGCAATAGTCTTCAAAGACATGAAAACCAG...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR-3UTR CAA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGCATCTATTTGCATCTTaGTTCTTTTGCTTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLEHLFAS*FFCFCL
Trigger: CAAGCAGAAGCAAAAGAACAAAGATGCAAATAGATG...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR TCA 90 bp GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTTTGAGCGCTTTCATCTaGCCTTCTCTAGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: DMPSHLSTDSPFPLKLTSLSAFI*PSLEAI
Trigger: GATCGCTTCTAGAGAAGGTCAGATGAAAGCGCTCAA...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTCCCAGGACTGCATGTaGTATTGGAGAACTTCTGCG +
Preference number: 4 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHSQDCM*YWRTSA
Trigger: CGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR TCA 90 bp TGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCTGAATGTCCATCAGCATTGGATGAAGAAGAGCTaGGCAAGGCAACTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: WKHSKCQSERRHLNVHQHWMKKS*ARQLSN
Trigger: ATTTGACAGTTGCCTTGCTCAGCTCTTCTTCATCCA...ATGCTGATGGACATTCAGATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp TCTTTGTTCTTTTGCTTCTGCTTGCTGCTATGCCTGCCTTTGCAATTCCACCCCAGCGATCCCCATAACTaGTTGAAATATCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: SLFFCFCLLLCLPLQFHPSDPHN*LKYQSI
Trigger: TATGCTCTGATATTTCAAGCAGTTATGGGGATCGCT...GGGGTGGAATTGCAAAGGCAGGCATAGCAGCAAGCAGAAGCAAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGATATTTCCCAGGACTaGATGTGCTATTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: PHLPSVVIKLLWVMNLCLDISQD*MCYWRT
Trigger: AGTTCTCCAATAGCACATGCAGTCCTGGGAAATATC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR TCA 90 bp TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCAAGAAGATGTATGGATaGAGAAGAGCTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: YRISSGGSTANVNQRGDIKKMYG*RRAEQG
Trigger: GCCTTGCTCAGCTCTTCTTCATCCATACATCTTCTT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCGATATTTCCCAGGACTaGATGTGCTATTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: YRISSGGSTANVNQRGDIDISQD*MCYWRT
Trigger: AGTTCTCCAATAGCACATGCAGTCCTGGGAAATATC...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp GGGAAAATCAAAGACACAAAACTAGCTAACAATGGTTTGAGCTATAGGAAATCATCCCAGGACTGCATGTaGTATTGGAGAACTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GKIKDTKLANNGLSYRKSSQDCM*YWRTSA
Trigger: CGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGA...TGATTTCCTATAGCTCAAACCATTGTTAGCTAGTTTTGTGTCTTTGATTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR CCA 90 bp CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGAATTGGGTTAAGCATTaGGGGCATAAAAAGATAGAT +
Preference number: 4 (lower is better)
Translates to: PHLPSVVIKLLWVMNLCLNWVKH*GHKKID
Trigger: ATCTATCTTTTTATGCCCCCAATGCTTAACCCAATT...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR TCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGTGGATGAAGAAGAGCTaGGCAAGGCAACTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLEWMKKS*ARQLSN
Trigger: ATTTGACAGTTGCCTTGCTCAGCTCTTCTTCATCCA...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR TCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGAAGAAGATGTATGGATaGAGAAGAGCTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLEKKMYG*RRAEQG
Trigger: GCCTTGCTCAGCTCTTCTTCATCCATACATCTTCTT...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp TATAGAATTTCCTCTGGTGGAAGCACAGCAAATGTCAATCAGAGAGGAGACATCAAGGCAACTGTCAAATaGAATTTCATAGAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: YRISSGGSTANVNQRGDIKATVK*NFIEVK
Trigger: TTTGACCTCTATGAAATTGCATTTGACAGTTGCCTT...GATGTCTCCTCTCTGATTGACATTTGCTGTGCTTCCACCAGAGGAAATTCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
3UTR CAA 72 bp AGTTGGCATTTTCTGGTGGACGTAGCTGAGTATCCTTaGATTCAACTAAGTTTTTATTGTATCTACCTAGAG +
Preference number: 4 (lower is better)
Translates to: SWHFLVDVAEYP*IQLSFYCIYLE
Trigger: CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTCCACCAGAAAATGCCAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCAGCGATCCCCATAACTaGTTGAAATATCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: QYIPILSPGEVRNMEFSPSDPHN*LKYQSI
Trigger: TATGCTCTGATATTTCAAGCAGTTATGGGGATCGCT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp GACGTAGCTGAGTATCCTTTGATTCAACTAAGTTTTTATTGTATCTACCTAGAGATGCATTACAGTTATTaGCAGCAAAGGGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: DVAEYPLIQLSFYCIYLEMHYSY*QQRAIV
Trigger: TACTATGGCCCTTTGCTGGCAATAACTGTAATGCAT...CTCTAGGTAGATACAATAAAAACTTAGTTGAATCAAAGGATACTCAGCTACGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR GCA 90 bp CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCAAGGCAACTGTCAAATaGAATTTCATAGAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: QYIPILSPGEVRNMEFSPKATVK*NFIEVK
Trigger: TTTGACCTCTATGAAATTGCATTTGACAGTTGCCTT...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS CCA 90 bp AGTACAGTTCCCTGCCAATGTGGTGATGTACATCAGGCTCAGGAGTaGTCCCAGCCACAGGCGGGCACCCACCAGCCCTCTGAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: STVPCQCGDVHQAQE*SQPQAGTHQPSEAS
Trigger: ACTGGCCTCAGAGGGCTGGTGGGTGCCCGCCTGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGGAACTGTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR CAA 90 bp CCCCACTTGCCTTCCGTGGTAATAAAACTCCTTTGGGTAATGAATTTGTGCCTGGACAACAGCTGCCCCTaGCAGAATGGTAATCTCTTA +
Preference number: 5 (lower is better)
Translates to: PHLPSVVIKLLWVMNLCLDNSCP*QNGNLL
Trigger: TAAGAGATTACCATTCTGCAAGGGGCAGCTGTTGTC...CAGGCACAAATTCATTACCCAAAGGAGTTTTATTACCACGGAAGGCAAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR CAA 90 bp GACATGCCAAGCCATCTTAGCACAGACTCCCCTTTCCCTTTAAAACTCACTTCTGACAACAGCTGCCCCTaGCAGAATGGTAATCTCTTA +
Preference number: 5 (lower is better)
Translates to: DMPSHLSTDSPFPLKLTSDNSCP*QNGNLL
Trigger: TAAGAGATTACCATTCTGCAAGGGGCAGCTGTTGTC...AGAAGTGAGTTTTAAAGGGAAAGGGGAGTCTGTGCTAAGATGGCTTGGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS GCA 90 bp TGGGTTAAGCATTGGGGGCATAAAAAGATAGATATTTCCCAGGACTaGATGTGCTATTGGAGAACTTCTGCGGCTGATCCGATGCATTAC +
Preference number: 5 (lower is better)
Translates to: WVKHWGHKKIDISQD*MCYWRTSAADPMHY
Trigger: GTAATGCATCGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGAAATATCTATCTTTTTATGCCCCCAATGCTTAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR CAA 90 bp CAGTATATACCAATTTTAAGTCCAGGTGAAGTTAGAAATATGGAATTCAGTCCCGATGCATTACAGTTATaGCCAGCAAAGGGCCATAGT +
Preference number: 5 (lower is better)
Translates to: QYIPILSPGEVRNMEFSPDALQL*PAKGHS
Trigger: ACTATGGCCCTTTGCTGGCAATAACTGTAATGCATC...GGGACTGAATTCCATATTTCTAACTTCACCTGGACTTAAAATTGGTATATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS-3UTR CAA 90 bp GGGAAAATCAAAGACACAAAACTAGCTAACAATGGTTTGAGCTATAGGAAATCAGATGCATTACAGTTATaGCCAGCAAAGGGCCATAGT +
Preference number: 5 (lower is better)
Translates to: GKIKDTKLANNGLSYRKSDALQL*PAKGHS
Trigger: ACTATGGCCCTTTGCTGGCAATAACTGTAATGCATC...TGATTTCCTATAGCTCAAACCATTGTTAGCTAGTTTTGTGTCTTTGATTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS CCA 72 bp CCCTGCCAATGTGGTGATGTACATCAGGCTCAGGAGTaGTCCCAGCCACAGGCGGGCACCCACCAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PCQCGDVHQAQE*SQPQAGTHQPS
Trigger: AGAGGGCTGGTGGGTGCCCGCCTGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS TCA 72 bp CCTCAGAAAAGCTGCCAGTCCCATCCTGGTGACTCGTaGGTTCGTCAGTATTGTTGTATATTGCAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: PQKSCQSHPGDS*VRQYCCILQGV
Trigger: CACCCCCTGCAATATACAACAATACTGACGAACTCACGAGTCACCAGGATGGGACTGGCAGCTTTTCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS TCA 72 bp CCAGGACTGCATGTGCTATTGGAGAACTTCTGCGGCTaGTCCGATGCATTACAGTTATTGCCAGCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PGLHVLLENFCG*SDALQLLPAKG
Trigger: GCCCTTTGCTGGCAATAACTGTAATGCATCGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS TCA 72 bp CTACACCCCTCAGAAAAGCTGCCAGTCCCATCCTGGTaGCTCGTGAGTTCGTCAGTATTGTTGTATATTGCA +
Preference number: 6 (lower is better)
Translates to: LHPSEKLPVPSW*LVSSSVLLYIA
Trigger: TGCAATATACAACAATACTGACGAACTCACGAGTCACCAGGATGGGACTGGCAGCTTTTCTGAGGGGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS TCA 72 bp CTAAATAAATTACAGTACAGTTCCCTGCCAATGTGGTaGTGTACATCAGGCTCAGGAGTGGTCCCAGCCACA +
Preference number: 6 (lower is better)
Translates to: LNKLQYSSLPMW*CTSGSGVVPAT
Trigger: TGTGGCTGGGACCACTCCTGAGCCTGATGTACATCACCACATTGGCAGGGAACTGTACTGTAATTTATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS TCA 72 bp ATGTCAGCCCCAGCCAGCATAGACAAAAATTGGTACTaGGGCTCCTGCAGACTCCTTTCAGTCCTTACTAAA +
Preference number: 6 (lower is better)
Translates to: MSAPASIDKNWY*GSCRLLSVLTK
Trigger: TTTAGTAAGGACTGAAAGGAGTCTGCAGGAGCCTCAGTACCAATTTTTGTCTATGCTGGCTGGGGCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2
CDS GCA 72 bp CATTGGGGGCATAAAAAGATAGATATTTCCCAGGACTaGATGTGCTATTGGAGAACTTCTGCGGCTGATCCG +
Preference number: 6 (lower is better)
Translates to: HWGHKKIDISQD*MCYWRTSAADP
Trigger: CGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGAAATATCTATCTTTTTATGCCCCCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000098198.3
ENSMUST00000214345.2
ENSMUST00000215673.2