Pregenerated sensors for OLFR613 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078624Ensembl transcript IDs: ENSMUST00000106888.3, ENSMUST00000214173.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTTCCTTCCTGAGGGCACGAGTTCCATTTCTGAGATCCAAATGCTaGAAGGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: TSFLRARVPFLRSKC*KEKPKTACYPLTST Trigger: TGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCCTTCCAGCATTTGGATCTCAGAAATGGAACTCGTGCCCTCAGGAAGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CCA 90 bp | AAACACCTGCCTCTAGCCAGTAAGTGTCGGACAGAGCAGAGGCTGTaGAATGCATTTGGGATTGGGACCATTTTCAATCATTTAATATTT | + |
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Preference number: 1 (lower is better) Translates to: KHLPLASKCRTEQRL*NAFGIGTIFNHLIF Trigger: AAATATTAAATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCGACACTTACTGGCTAGAGGCAGGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR TCA 90 bp | GGCCCTCGCTATTCTGTTGCATGCTTATTGATCATCAGAGATAATTaGGTTTTTCCTTCTCTGTTTGAAAGACAAGATGTAGATGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: GPRYSVACLLIIRDN*VFPSLFERQDVDAH Trigger: GTGGGCATCTACATCTTGTCTTTCAAACAGAGAAGGAAAAACTCAATTATCTCTGATGATCAATAAGCATGCAACAGAATAGCGAGGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCCCCTCGCTATTCTGTTaGATGCTTATTGATCATCAG | + |
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Preference number: 2 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVPSLFC*MLIDHQ Trigger: CTGATGATCAATAAGCATGCAACAGAATAGCGAGGG...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACTGCCCACATTTAACTTaGAAACTGACAAGGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHCPHLT*KLTRSD Trigger: ATCAGACCTTGTCAGTTTTCAAGTTAAATGTGGGCA...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACCTGACCAATACCACATaGTCAGTCTTAAACGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHLTNTT*SVLNVS Trigger: AGAAACGTTTAAGACTGACCATGTGGTATTGGTCAG...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCCGCTATTCTGTTGCATaGTTATTGATCATCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVRYSVA*LLIIRD Trigger: ATCTCTGATGATCAATAAGCATGCAACAGAATAGCG...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATTGCCCACATTTAACTTaGAAACTGACAAGGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHCPHLT*KLTRSD Trigger: ATCAGACCTTGTCAGTTTTCAAGTTAAATGTGGGCA...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATTTTTCCTTCTCTGTTTaGAAGACAAGATGTAGATGC | + |
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Preference number: 2 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHFSFSV*KTRCRC Trigger: GCATCTACATCTTGTCTTTCAAACAGAGAAGGAAAA...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATGAAGTGTACTTGGGCTaGAGGGGATGGGAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: GKTKNCLLSSNLHMNRINEVYLG*RGWEQT Trigger: TGTCTGTTCCCATCCCCTCCAGCCCAAGTACACTTC...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATGCAGAGGCTGTGGAATaGATTTGGGATTGGGACCAT | + |
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Preference number: 2 (lower is better) Translates to: GKTKNCLLSSNLHMNRINAEAVE*IWDWDH Trigger: ATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGC...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATTCTGTCAGAAGTTCTTaGCCCCTGTTCTCACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: GKTKNCLLSSNLHMNRINSVRSS*PLFSLF Trigger: AAACAGTGAGAACAGGGGTCAAGAACTTCTGACAGA...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATCCCTCGCTATTCTGTTaGATGCTTATTGATCATCAG | + |
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Preference number: 2 (lower is better) Translates to: LLFFKVIASLFIQHWYMHPSLFC*MLIDHQ Trigger: CTGATGATCAATAAGCATGCAACAGAATAGCGAGGG...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATGTATGTATATTTTCATaGCTGACCAATACCACATGG | + |
|
Preference number: 2 (lower is better) Translates to: LLFFKVIASLFIQHWYMHVCIFS*LTNTTW Trigger: CCATGTGGTATTGGTCAGCCATGAAAATATACATAC...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTTGAACTACATCAGTTATAAAACGGTTCATTTGTCCTGTTGCAATGGTTTTTCCTTCTCTGTTTaGAAGACAAGATGTAGATGC | + |
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Preference number: 2 (lower is better) Translates to: YVLNYISYKTVHLSCCNGFSFSV*KTRCRC Trigger: GCATCTACATCTTGTCTTTCAAACAGAGAAGGAAAA...ACCATTGCAACAGGACAAATGAACCGTTTTATAACTGATGTAGTTCAACACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATCTTTTCCATGGTCTCTaGCAAGAATCACTTAAATTG | + |
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Preference number: 2 (lower is better) Translates to: GKTKNCLLSSNLHMNRINLFHGL*QESLKL Trigger: CAATTTAAGTGATTCTTGTCAGAGACCATGGAAAAG...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTGTTGAACTACATCAGTTATAAAACGGTTCATTTGTCCTGTTGCAATGGTCGCTATTCTGTTGCATaGTTATTGATCATCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YVLNYISYKTVHLSCCNGRYSVA*LLIIRD Trigger: ATCTCTGATGATCAATAAGCATGCAACAGAATAGCG...ACCATTGCAACAGGACAAATGAACCGTTTTATAACTGATGTAGTTCAACACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTGTTGAACTACATCAGTTATAAAACGGTTCATTTGTCCTGTTGCAATGGTGTATGTATATTTTCATaGCTGACCAATACCACATGG | + |
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Preference number: 2 (lower is better) Translates to: YVLNYISYKTVHLSCCNGVCIFS*LTNTTW Trigger: CCATGTGGTATTGGTCAGCCATGAAAATATACATAC...ACCATTGCAACAGGACAAATGAACCGTTTTATAACTGATGTAGTTCAACACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATGAATGCATTTGGGATTaGGACCATTTTCAATCATTT | + |
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Preference number: 2 (lower is better) Translates to: GKTKNCLLSSNLHMNRINECIWD*DHFQSF Trigger: AAATGATTGAAAATGGTCCCAATCCCAAATGCATTC...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CCA 72 bp | CCTCTAGCCAGTAAGTGTCGGACAGAGCAGAGGCTGTaGAATGCATTTGGGATTGGGACCATTTTCAATCAT | + |
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Preference number: 3 (lower is better) Translates to: PLASKCRTEQRL*NAFGIGTIFNH Trigger: ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCGACACTTACTGGCTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CAA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATCCCATGTACACATCCTaGCTCTTTTTCAAAGTCATA | + |
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Preference number: 3 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHPMYTS*LFFKVI Trigger: TATGACTTTGAAAAAGAGCAAGGATGTGTACATGGG...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR GCA 72 bp | AAGTCAAAACAAGTCCAGGCCCACCAATTACACCATTaGAAGCTTTGCCCTGACCTTTGTACTAGAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KSKQVQAHQLHH*KLCPDLCTRVK Trigger: TTTCACTCTAGTACAAAGGTCAGGGCAAAGCTTGCAATGGTGTAATTGGTGGGCCTGGACTTGTTTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CCA 72 bp | GTGTGGCACCTCACAACCATTTGTAACTCCAATCTCTaGAGACTGGATACCCTTTTCTGGCTAGAAATTCAT | + |
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Preference number: 3 (lower is better) Translates to: VWHLTTICNSNL*RLDTLFWLEIH Trigger: ATGAATTTCTAGCCAGAAAAGGGTATCCAGTCTCCAGAGATTGGAGTTACAAATGGTTGTGAGGTGCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CCA 72 bp | CTGAGGGCACGAGTTCCATTTCTGAGATCCAAATGCTaGAAGGAAAAACCAAAAACTGCTTGTTATCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: LRARVPFLRSKC*KEKPKTACYPL Trigger: TAGAGGATAACAAGCAGTTTTTGGTTTTTCCTTCCAGCATTTGGATCTCAGAAATGGAACTCGTGCCCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CCA 72 bp | TGTAACTCCAATCTCTGGAGACTGGATACCCTTTTCTaGCTAGAAATTCATGTAGTGCATAGACATATATGG | + |
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Preference number: 3 (lower is better) Translates to: CNSNLWRLDTLF*LEIHVVHRHIW Trigger: CCATATATGTCTATGCACTACATGAATTTCTAGCCAGAAAAGGGTATCCAGTCTCCAGAGATTGGAGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR TCA 72 bp | TCCTTTTCCATGGTCTCTGACAAGAATCACTTAAATTaGTGTCAGTTTTCTGGAAATCTGGAAGTGTACTTG | + |
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Preference number: 3 (lower is better) Translates to: SFSMVSDKNHLN*CQFSGNLEVYL Trigger: CAAGTACACTTCCAGATTTCCAGAAAACTGACATCAATTTAAGTGATTCTTGTCAGAGACCATGGAAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR-3UTR CAA 90 bp | TATGTGTTGAACTACATCAGTTATAAAACGGTTCATTTGTCCTGTTGCAATGGTGGAATGCATTTGGGATaGGGACCATTTTCAATCATT | + |
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Preference number: 3 (lower is better) Translates to: YVLNYISYKTVHLSCCNGGMHLG*GPFSII Trigger: AATGATTGAAAATGGTCCCAATCCCAAATGCATTCC...ACCATTGCAACAGGACAAATGAACCGTTTTATAACTGATGTAGTTCAACACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR TCA 72 bp | CTTTGCCCTGACCTTTGTACTAGAGTGAAAACTGTATaGCAATTGTGCCTTCTTTTTCTGATAACTACTAAA | + |
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Preference number: 3 (lower is better) Translates to: LCPDLCTRVKTV*QLCLLFLITTK Trigger: TTTAGTAGTTATCAGAAAAAGAAGGCACAATTGTCATACAGTTTTCACTCTAGTACAAAGGTCAGGGCAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCGGCCACCAGAACACCTaGCTCTACAGAGGACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVGHQNT*LYRGQC Trigger: ACACTGTCCTCTGTAGAGTCAGGTGTTCTGGTGGCC...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACAGCACTGTGCAGAGGTaGCAGACACAGGTTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHSTVQR*QTQVCR Trigger: CCTGCAAACCTGTGTCTGTCACCTCTGCACAGTGCT...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAGCACTGTGCAGAGGTaGCAGACACAGGTTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVSTVQR*QTQVCR Trigger: CCTGCAAACCTGTGTCTGTCACCTCTGCACAGTGCT...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACACCAGCACTGTaGAGAGGTGACAGACACAGG | + |
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Preference number: 4 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVKTPAL*RGDRHR Trigger: CCTGTGTCTGTCACCTCTGCACAGTGCTGGTGTTTT...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCACTCCAAATCGCTTGTaGAAGGCAGCTTGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVTPNRL*KAAWIC Trigger: GCAGATCCAAGCTGCCTTGCACAAGCGATTTGGAGT...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACCGTCCACTGCAAATGTaGAGAGTACACAGACCAATC | + |
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Preference number: 4 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHRPLQM*RVHRPI Trigger: GATTGGTCTGTGTACTCTGCACATTTGCAGTGGACG...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACGACCAGGTATACCAATaGAGGAAAAAGTGGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHDQVYQ*RKKWAN Trigger: ATTGGCCCACTTTTTCCTTCATTGGTATACCTGGTC...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACGGTGGTGTAGAGAATTaGAGATGTTTCCTGGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHGGVEN*RCFLGV Trigger: TACACCCAGGAAACATCTCCAATTCTCTACACCACC...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATTTGTGCAAGGCAGCTTaGATCTGCCTGGATTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHLCKAA*ICLDLR Trigger: CCTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAA...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGTTCTTGACCCCTGTTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCACAGAGGACAGTGTGTaGATAAAGAACATTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QKFLTPVLTVSLPLSYQVTEDSV*IKNICV Trigger: GACACAAATGTTCTTTATTCACACACTGTCCTCTGT...GACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAACAGGGGTCAAGAACTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATTCCAGACCGACATCATaGACATCAAACCAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHSRPTS*TSNQKM Trigger: CATCTTCTGGTTTGATGTCCATGATGTCGGTCTGGA...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATGGTAAGCATTGCTCATaGTGGTGTAGAGAATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHGKHCS*WCRELE Trigger: CTCCAATTCTCTACACCACCATGAGCAATGCTTACC...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | ACATCCTTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACGGAGGAGAAGAAAGTTaGCCCCAAGTGCTACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TSLLFFKVIASLFIQHWYGGEES*PQVLPG Trigger: ACCTGGTAGCACTTGGGGGCAACTTTCTTCTCCTCC...GTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAAGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATGGAGGAGAAGAAAGTTaGCCCCAAGTGCTACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLFFKVIASLFIQHWYMHGGEES*PQVLPG Trigger: ACCTGGTAGCACTTGGGGGCAACTTTCTTCTCCTCC...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | ACATCCTTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACACTCCAAATCGCTTGTaGAAGGCAGCTTGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: TSLLFFKVIASLFIQHWYTPNRL*KAAWIC Trigger: GCAGATCCAAGCTGCCTTGCACAAGCGATTTGGAGT...GTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAAGGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATTTGTGCAAGGCAGCTTaGATCTGCCTGGATTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLFFKVIASLFIQHWYMHLCKAA*ICLDLR Trigger: CCTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAA...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR GCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATCGTCCACTGCAAATGTaGAGAGTACACAGACCAATC | + |
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Preference number: 4 (lower is better) Translates to: LLFFKVIASLFIQHWYMHRPLQM*RVHRPI Trigger: GATTGGTCTGTGTACTCTGCACATTTGCAGTGGACG...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | ACATCCTTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACAGTGTGAGAGGATATTaGCCCCACAAAAAGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: TSLLFFKVIASLFIQHWYSVRGY*PHKKET Trigger: CGTTTCCTTTTTGTGGGGCCAATATCCTCTCACACT...GTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAAGGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATTCCAGACCGACATCATaGACATCAAACCAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LLFFKVIASLFIQHWYMHSRPTS*TSNQKM Trigger: CATCTTCTGGTTTGATGTCCATGATGTCGGTCTGGA...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| 3UTR CAA 72 bp | TATGTGTTGAACTACATCAGTTATAAAACGGTTCATTaGTCCTGTTGCAATGGTGCTGGTGATCAACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YVLNYISYKTVH*SCCNGAGDQPR Trigger: TCTGGGTTGATCACCAGCACCATTGCAACAGGACAAATGAACCGTTTTATAACTGATGTAGTTCAACACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATGACCAGGTATACCAATaGAGGAAAAAGTGGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: GKTKNCLLSSNLHMNRINDQVYQ*RKKWAN Trigger: ATTGGCCCACTTTTTCCTTCATTGGTATACCTGGTC...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATAGTGTGAGAGGATATTaGCCCCACAAAAAGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: GKTKNCLLSSNLHMNRINSVRGY*PHKKET Trigger: CGTTTCCTTTTTGTGGGGCCAATATCCTCTCACACT...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR TCA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATACAGAGGACAGTGTGTaGATAAAGAACATTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLFFKVIASLFIQHWYMHTEDSV*IKNICV Trigger: GACACAAATGTTCTTTATTCACACACTGTCCTCTGT...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CCA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATAAGCATTGCTCATGGTaGTGTAGAGAATTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GKTKNCLLSSNLHMNRINKHCSW*CRELEM Trigger: CATCTCCAATTCTCTACACCACCATGAGCAATGCTT...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATCTTGTGCAAGGCAGCTaGGATCTGCCTGGATTTGAG | + |
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Preference number: 5 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHLVQGS*DLPGFE Trigger: CTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAAG...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACTGTTTCCCTCCCCCTCTCATACCAAGTCAAAACAAGTCCAGGCCCACTTTCCAGTTTCGATCTaGGATCCCCAGTTTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: FSLFPSPSHTKSKQVQAHFPVSI*DPQFHH Trigger: GTGATGAAACTGGGGATCCAAGATCGAAACTGGAAA...GTGGGCCTGGACTTGTTTTGACTTGGTATGAGAGGGGGAGGGAAACAGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | CGGACAGAGCAGAGGCTGTGGAATGCATTTGGGATTGGGACCATTTTCAATCATTGGTGGTGTAGAGAATaGGAGATGTTTCCTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: RTEQRLWNAFGIGTIFNHWWCRE*EMFPGC Trigger: ACACCCAGGAAACATCTCCAATTCTCTACACCACCA...ATGATTGAAAATGGTCCCAATCCCAAATGCATTCCACAGCCTCTGCTCTGTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS TCA 90 bp | TCCGCAGGCCAAGTTAAGCATATCTGGGTAATAACAATAGGAGTGTaGGAGGATATTGGCCCCACAAAAAGGAAACGTCCTGAGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SAGQVKHIWVITIGV*EDIGPTKRKRPEEK Trigger: TTTTTCCTCAGGACGTTTCCTTTTTGTGGGGCCAATATCCTCTCACACTCCTATTGTTATTACCCAGATATGCTTAACTTGGCCTGCGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATAGGAGGAGAAGAAAGTaGCCCCCAAGTGCTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: GKTKNCLLSSNLHMNRINRRRRK*PPSATR Trigger: CCTGGTAGCACTTGGGGGCAACTTTCTTCTCCTCCT...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACATGCATGTGACAGACACAGGTTaGCAGGGATTTCCAGTTTCG | + |
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Preference number: 5 (lower is better) Translates to: LLFFKVIASLFIQHWYMHVTDTG*QGFPVS Trigger: CGAAACTGGAAATCCCTGCAAACCTGTGTCTGTCAC...ATGCATGTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATCTTGTGCAAGGCAGCTaGGATCTGCCTGGATTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GKTKNCLLSSNLHMNRINLVQGS*DLPGFE Trigger: CTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAAG...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | ACATCCTTGCTCTTTTTCAAAGTCATAGCCTCCCTTTTCATTCAACATTGGTACTTTCCAGTTTCGATCTaGGATCCCCAGTTTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: TSLLFFKVIASLFIQHWYFPVSI*DPQFHH Trigger: GTGATGAAACTGGGGATCCAAGATCGAAACTGGAAA...GTACCAATGTTGAATGAAAAGGGAGGCTATGACTTTGAAAAAGAGCAAGGATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATGTGACAGACACAGGTTaGCAGGGATTTCCAGTTTCG | + |
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Preference number: 5 (lower is better) Translates to: GKTKNCLLSSNLHMNRINVTDTG*QGFPVS Trigger: CGAAACTGGAAATCCCTGCAAACCTGTGTCTGTCAC...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS-3UTR CAA 90 bp | GGAAAAACCAAAAACTGCTTGTTATCCTCTAACCTCCACATGAACAGAATAAATTGGTGGTGTAGAGAATaGGAGATGTTTCCTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: GKTKNCLLSSNLHMNRINWWCRE*EMFPGC Trigger: ACACCCAGGAAACATCTCCAATTCTCTACACCACCA...ATTTATTCTGTTCATGTGGAGGTTAGAGGATAACAAGCAGTTTTTGGTTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS GCA 72 bp | TCCCCAGCAACAACACGTTGCACTCCAAATCGCTTGTaGAAGGCAGCTTGGATCTGCCTGGATTTGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SPATTRCTPNRL*KAAWICLDLRL Trigger: TAGCCTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAAGCGATTTGGAGTGCAACGTGTTGTTGCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS CAA 72 bp | TTCTGCTCCGCTCTAACCAGAAGGAGGAGAAGAAAGTaGCCCCCAAGTGCTACCAGGTACAGGAGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: FCSALTRRRRRK*PPSATRYRRQK Trigger: CTTCTGTCTCCTGTACCTGGTAGCACTTGGGGGCAACTTTCTTCTCCTCCTTCTGGTTAGAGCGGAGCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS TCA 72 bp | ATCGCTTGTGCAAGGCAGCTTGGATCTGCCTGGATTTaGGGCTATAAACCAGAGGGTTTAGCAGTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: IACARQLGSAWI*GYKPEGLAVGS Trigger: TGACCCCACTGCTAAACCCTCTGGTTTATAGCCTCAAATCCAGGCAGATCCAAGCTGCCTTGCACAAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS CAA 72 bp | AAACACCAGCACTGTGCAGAGGTGACAGACACAGGTTaGCAGGGATTTCCAGTTTCGATCTTGGATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: KHQHCAEVTDTG*QGFPVSILDPQ Trigger: CTGGGGATCCAAGATCGAAACTGGAAATCCCTGCAAACCTGTGTCTGTCACCTCTGCACAGTGCTGGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS CCA 72 bp | GAGGAGGTAAGCATTGCTCATGGTGGTGTAGAGAATTaGAGATGTTTCCTGGGTGTAACGATGCAGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: EEVSIAHGGVEN*RCFLGVTMQYC Trigger: GCAGTACTGCATCGTTACACCCAGGAAACATCTCCAATTCTCTACACCACCATGAGCAATGCTTACCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS TCA 72 bp | GCCACCAGAACACCTGACTCTACAGAGGACAGTGTGTaGATAAAGAACATTTGTGTCAGACAGGCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ATRTPDSTEDSV*IKNICVRQASR Trigger: TCTGGATGCCTGTCTGACACAAATGTTCTTTATTCACACACTGTCCTCTGTAGAGTCAGGTGTTCTGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS CCA 72 bp | CAGACACAGGTTTGCAGGGATTTCCAGTTTCGATCTTaGATCCCCAGTTTCATCACAGTTCCCAAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: QTQVCRDFQFRS*IPSFITVPKIF Trigger: GAAGATCTTGGGAACTGTGATGAAACTGGGGATCCAAGATCGAAACTGGAAATCCCTGCAAACCTGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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| CDS CAA 72 bp | ACAGACACAGGTTTGCAGGGATTTCCAGTTTCGATCTaGGATCCCCAGTTTCATCACAGTTCCCAAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: TDTGLQGFPVSI*DPQFHHSSQDL Trigger: AAGATCTTGGGAACTGTGATGAAACTGGGGATCCAAGATCGAAACTGGAAATCCCTGCAAACCTGTGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106888.3 ENSMUST00000214173.2 |
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