Pregenerated sensors for OLFR608 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073948

Ensembl transcript IDs: ENSMUST00000213546.3

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAAGCCATAGCCACCAGGATGGCTGACTCAAAAATGCAAAGTGTGTaGATAAAATACATTTGTGTTAGACAGACATCAAACTCAATCCAG	+
Preference number: 5 (lower is better) Translates to: KAIATRMADSKMQSV*IKYICVRQTSNSIQ Trigger: CTGGATTGAGTTTGATGTCTGTCTAACACAAATGTATTTTATTCACACACTTTGCATTTTTGAGTCAGCCATCCTGGTGGCTATGGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213546.3
CDS CAA 90 bp	CAGGGCTTTGGAGCGGGCATTCTGGGAAGAAAGCCGGAACACTGCTaGAAGGATTTTTATGTAAGATGCGGCTATGAGCCATACGTCCAA	+
Preference number: 6 (lower is better) Translates to: QGFGAGILGRKPEHC*KDFYVRCGYEPYVQ Trigger: TTGGACGTATGGCTCATAGCCGCATCTTACATAAAAATCCTTCAAGCAGTGTTCCGGCTTTCTTCCCAGAATGCCCGCTCCAAAGCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213546.3
CDS CAA 72 bp	GGAGCGGGCATTCTGGGAAGAAAGCCGGAACACTGCTaGAAGGATTTTTATGTAAGATGCGGCTATGAGCCA	+
Preference number: 6 (lower is better) Translates to: GAGILGRKPEHC*KDFYVRCGYEP Trigger: TGGCTCATAGCCGCATCTTACATAAAAATCCTTCAAGCAGTGTTCCGGCTTTCTTCCCAGAATGCCCGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213546.3
CDS CAA 72 bp	GCTGCTGAGATTCCGTATGCTCTGTTAATGAAAGTGTaGGCACTGGCTAACTTCACCACAGCCATGTGCTCA	+
Preference number: 6 (lower is better) Translates to: AAEIPYALLMKV*ALANFTTAMCS Trigger: TGAGCACATGGCTGTGGTGAAGTTAGCCAGTGCCAACACTTTCATTAACAGAGCATACGGAATCTCAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213546.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu