Pregenerated sensors for OLFR607 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000081945Ensembl transcript IDs: ENSMUST00000119283.4, ENSMUST00000214347.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAACCCACTCACTCCCACTTCCTGGCCCTGGCATTCCCCTACACTaGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: PTHSLPLPGPGIPLH*GIKPSQDQVPLLPL Trigger: CAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATGCCAGGGCCAGGAAGTGGGAGTGAGTGGGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR TCA 90 bp | ACTGGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTaGAGATCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: TGASSLHRTKCLSSH*RSTRPSSATYAAGA Trigger: GGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 90 bp | GACCAAGTGCCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTaGTACATATGCAGCTGGAGCCATGGTTCCCTCCATGTGTACTCT | + |
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Preference number: 1 (lower is better) Translates to: DQVPLLPLKINKAIL*YICSWSHGSLHVYS Trigger: AGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 90 bp | CCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATATaGAGCTGGAGCCATGGTTCCCTCCATGTGTACTCTTTGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PLLPLKINKAILCYI*SWSHGSLHVYSLVG Trigger: ACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | GAAGATCAACAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATaGTTCCCTCCATGTGTACTCTTTGGTTGGTGGTTTAGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: EDQQGHPLLHMQLEP*FPPCVLFGWWFSPW Trigger: CCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | CATTTGTTGGCATCCACAGTAGTGTCTGGGTGTAGTGACTGTATATaGGATGGATCCCCAGGTGGGGCAGTCTCTGGATGGCCTTTAATT | + |
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Preference number: 1 (lower is better) Translates to: HLLASTVVSGCSDCI*DGSPGGAVSGWPLI Trigger: AATTAAAGGCCATCCAGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACACTACTGTGGATGCCAACAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | GTACTCTTTGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGTCTTaGATGGTTCATATTGTTGTTCCTTCTATGCGGCTGCAAACCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLFGWWFSPWELWRS*MVHIVVPSMRLQTP Trigger: TGGGGTTTGCAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | CTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATATGCAGCTaGAGCCATGGTTCCCTCCATGTGTACTCTTTGGTTGGTGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: LPLKINKAILCYICS*SHGSLHVYSLVGGL Trigger: TAAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 90 bp | GTCAGTCAGTCATTTCTACTATATCAGAGTCATAGTCCCTTAGACTaGTACTTCAGCAATGCTCTCCTGCAGGTGGAGTGTATAGCAATC | + |
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Preference number: 1 (lower is better) Translates to: VSQSFLLYQSHSPLD*YFSNALLQVECIAI Trigger: GATTGCTATACACTCCACCTGCAGGAGAGCATTGCTGAAGTAGCAGTCTAAGGGACTATGACTCTGATATAGTAGAAATGACTGACTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | ATAAGGGGGAAGAATTTGAATGATGGCAAATTGACCCTTGACACTTaGAGGAGAGTTAGTCTTCCAAGGGTGGGCTTCCTTATAACTATC | + |
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Preference number: 1 (lower is better) Translates to: IRGKNLNDGKLTLDT*RRVSLPRVGFLITI Trigger: GATAGTTATAAGGAAGCCCACCCTTGGAAGACTAACTCTCCTCCAAGTGTCAAGGGTCAATTTGCCATCATTCAAATTCTTCCCCCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 90 bp | CACAAAACAGGCCTCAACAGATACAAGAAGATTGAAATAATCCCATaGATCCTATCAGGTCACCACAGACTAAGGCTGGTCTTCAATAAC | + |
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Preference number: 1 (lower is better) Translates to: HKTGLNRYKKIEIIP*ILSGHHRLRLVFNN Trigger: GTTATTGAAGACCAGCCTTAGTCTGTGGTGACCTGATAGGATGCATGGGATTATTTCAATCTTCTTGTATCTGTTGAGGCCTGTTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 90 bp | TGCTACTTCAGCAATGCTCTCCTGCAGGTGGAGTGTATAGCAATCTaGCTTATCTCCTTCCTGAGTCTTAGATACATATTCATCTTATTT | + |
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Preference number: 1 (lower is better) Translates to: CYFSNALLQVECIAI*LISFLSLRYIFILF Trigger: AAATAAGATGAATATGTATCTAAGACTCAGGAAGGAGATAAGCCAGATTGCTATACACTCCACCTGCAGGAGAGCATTGCTGAAGTAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACACTGGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTGAAGGATGGATCCCCAGGTaGGGCAGTCTCTGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: PTLGHQAFTGPSASPPTEGWIPR*GSLWMA Trigger: GGCCATCCAGAGACTGCCCCACCTGGGGATCCATCC...TTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CAA 90 bp | TGCTACATATGCAGCTGGAGCCATGGTTCCCTCCATGTGTACTCTTaGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGTCTTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: CYICSWSHGSLHVYS*VGGLVPGSSGGLGW Trigger: CCATCCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACACTGGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTGAAGGGGCAGTCTCTGGATaGCCTTTAATTCATTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PTLGHQAFTGPSASPPTEGAVSG*PLIHSL Trigger: CAGAGAATGAATTAAAGGCCATCCAGAGACTGCCCC...TTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAAGTGCCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATACATAGTGTTCAGCCTTaGAAACACCCACACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: DQVPLLPLKINKAILCYIHSVQP*KHPHPH Trigger: GTGTGGGTGTGGGTGTTTTCAAGGCTGAACACTATG...TATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACACTGGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTGAAAGGATGCAAATATCATaGCACTTAGTTATTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PTLGHQAFTGPSASPPTERMQIS*HLVIGN Trigger: GTTCCCAATAACTAAGTGTCATGATATTTGCATCCT...TTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAATCAAAAGATGGCCTAGTCAGCCATCATTGCAAAGAGAGGCCCATTGGGGCATTCCCCTACACTaGGGCATCAAGCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: KRIKRWPSQPSLQREAHWGIPLH*GIKPSQ Trigger: CTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATGCC...CCAATGGGCCTCTCTTTGCAATGATGGCTGACTAGGCCATCTTTTGATTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTTGACCAGACTAACCAGAGGCCACAGAGACAGAATCTAAATTACCAACTCCATTGGAGACCCTaGGCTCAGTCCATTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LTLDQTNQRPQRQNLNYQLHWRP*AQSIGW Trigger: CCAACCAATGGACTGAGCCCAGGGTCTCCAATGGAG...TTGGTAATTTAGATTCTGTCTCTGTGGCCTCTGGTTAGTCTGGTCAAGGGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTAAATACACCCCAGTGGAGTAGAAAGAAGGAAATTATTAAACTCAGGGCTTGGTGGTTTAGTCCCTaGGAGCTCTGGAGGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: EVNTPQWSRKKEIIKLRAWWFSP*ELWRSW Trigger: CCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCA...AGCCCTGAGTTTAATAATTTCCTTCTTTCTACTCCACTGGGGTGTATTTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAATCAAAAGATGGCCTAGTCAGCCATCATTGCAAAGAGAGGCCCATTGGTGTGTACTCTTTGGTTaGTGGTTTAGTCCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KRIKRWPSQPSLQREAHWCVLFG*WFSPWE Trigger: CTCCCAGGGACTAAACCACCAACCAAAGAGTACACA...CCAATGGGCCTCTCTTTGCAATGATGGCTGACTAGGCCATCTTTTGATTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAAATACACCCCAGTGGAGTAGAAAGAAGGAAATTATTAAACTCAGGGCTTTCTGGTTTCCACACTaGAAACCCCCTATCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: EVNTPQWSRKKEIIKLRAFWFPH*KPPIRS Trigger: GGAGCGGATAGGGGGTTTTCAGTGTGGAAACCAGAA...AGCCCTGAGTTTAATAATTTCCTTCTTTCTACTCCACTGGGGTGTATTTACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTGCTCAGTCCATTGGTTaGCTGAGAGCATCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: LKALWLRELYLLVKISRAAQSIG*LRASTS Trigger: AGAGGTGGATGCTCTCAGCCAACCAATGGACTGAGC...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTATGCAGCTGGAGCCATaGTTCCCTCCATGTGTACTC | + |
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Preference number: 2 (lower is better) Translates to: LKALWLRELYLLVKISRAMQLEP*FPPCVL Trigger: GAGTACACATGGAGGGAACCATGGCTCCAGCTGCAT...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTCATAGTCCCTTAGACTaGTACTTCAGCAATGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LKALWLRELYLLVKISRAHSPLD*YFSNAL Trigger: GAGAGCATTGCTGAAGTAGCAGTCTAAGGGACTATG...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTTGACCAGACTAACCAGAGGCCACAGAGACAGAATCTAAATTACCAACCTTCTAAGAAGGACTaGAGTATCCACACTTTTATC | + |
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Preference number: 2 (lower is better) Translates to: LTLDQTNQRPQRQNLNYQPSKKD*SIHTFI Trigger: GATAAAAGTGTGGATACTCCAGTCCTTCTTAGAAGG...TTGGTAATTTAGATTCTGTCTCTGTGGCCTCTGGTTAGTCTGGTCAAGGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCCCTAATATGTCAATCTaGCTCAATGTCAGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SKSSLVERAVSASKNFKSPNMSI*LNVSQS Trigger: TGACTGACTGACATTGAGTCAGATTGACATATTAGG...GCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAAGGACTGGAGTATCCACACTTTTATCTTCCTTCTTCTTGAGCTTATCTGCACATACACAGACATaGATAAATAGGTATGTACCA | + |
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Preference number: 2 (lower is better) Translates to: LRRTGVSTLLSSFFLSLSAHTQT*INRYVP Trigger: TGGTACATACCTATTTATGCATGTCTGTGTATGTGC...AGATAAGCTCAAGAAGAAGGAAGATAAAAGTGTGGATACTCCAGTCCTTCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | CTCCTCCATTGGAGACCCTGGGCTCAGTCCATTGGTTaGCTGAGAGCATCCACCTCTATTTGTCAGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: LLHWRPWAQSIG*LRASTSICQAL Trigger: CAGTGCCTGACAAATAGAGGTGGATGCTCTCAGCCAACCAATGGACTGAGCCCAGGGTCTCCAATGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | CTAGCTCCTCCATTGGAGACCCTGGGCTCAGTCCATTaGTTGGCTGAGAGCATCCACCTCTATTTGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LAPPLETLGSVH*LAESIHLYLSG Trigger: GCCTGACAAATAGAGGTGGATGCTCTCAGCCAACCAATGGACTGAGCCCAGGGTCTCCAATGGAGGAGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | CTGGAGCCATGGTTCCCTCCATGTGTACTCTTTGGTTaGTGGTTTAGTCCCTGGGAGCTCTGGAGGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LEPWFPPCVLFG*WFSPWELWRSW Trigger: CCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 72 bp | CCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTaGTACATATGCAGCTGGAGCCATGGTTCCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PLLPLKINKAIL*YICSWSHGSLH Trigger: ATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTGGGTGTAGTGACTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTGTCACTAGGAGGATTTaGAGGAAGGTAGGGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VSGCSDCIWDGSPGGAVSVTRRI*RKVGKA Trigger: TGCCTTCCCTACCTTCCTCAAAATCCTCCTAGTGAC...AGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR TCA 72 bp | ATCCTAGCACTGGGGAGGCAGAGGCAGGCAGATTTCTaGGTTCAAGACCAACCTGGTCTACAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ILALGRQRQADF*VQDQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGTTGGTCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCCAGTGCTAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR TCA 72 bp | TCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTaGAGATCAACAAGGCCATCCTCTGCTACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLHRTKCLSSH*RSTRPSSATYA Trigger: TGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 72 bp | CCACTGAAGATCAACAAGGCCATCCTCTGCTACATATaGAGCTGGAGCCATGGTTCCCTCCATGTGTACTCT | + |
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Preference number: 3 (lower is better) Translates to: PLKINKAILCYI*SWSHGSLHVYS Trigger: AGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | CTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTaGATGGCCTTTAATTCATTCTCTGCGGCACACTTT | + |
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Preference number: 3 (lower is better) Translates to: LYMGWIPRWGSL*MAFNSFSAAHF Trigger: AAAGTGTGCCGCAGAGAATGAATTAAAGGCCATCCAGAGACTGCCCCACCTGGGGATCCATCCCATATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | GGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGTCTTaGATGGTTCATATTGTTGTTCCTTCTATGCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GWWFSPWELWRS*MVHIVVPSMRL Trigger: CAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | CAAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATaGTTCCCTCCATGTGTACTCTTTGGTTGGTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: QGHPLLHMQLEP*FPPCVLFGWWF Trigger: AAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | GGTGGTTTAGTCCCTGGGAGCTCTGGAGGTCTTGGATaGTTCATATTGTTGTTCCTTCTATGCGGCTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GGLVPGSSGGLG*FILLFLLCGCK Trigger: TTTGCAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGGGACTAAACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | TGGCCTAGTCAGCCATCATTGCAAAGAGAGGCCCATTaGACTTGCAAACTTTATATGCCCCAGTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WPSQPSLQREAH*TCKLYMPQYRG Trigger: TCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAATGATGGCTGACTAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | AAGATCAACAAGGCCATCCTCTGCTACATATGCAGCTaGAGCCATGGTTCCCTCCATGTGTACTCTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: KINKAILCYICS*SHGSLHVYSLV Trigger: AACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCATATGTAGCAGAGGATGGCCTTGTTGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 72 bp | GGAGGTCTTGGATGGTTCATATTGTTGTTCCTTCTATaGGGCTGCAAACCCCATCAACAACTTGGGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GGLGWFILLFLL*GCKPHQQLGSF Trigger: AAAGGACCCAAGTTGTTGATGGGGTTTGCAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | GTACTCTTTGGTTGGTGGTTTAGTCCCTGGGAGCTCTaGAGGTCTTGGATGGTTCATATTGTTGTTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VLFGWWFSPWEL*RSWMVHIVVPS Trigger: AGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAATCAAAAGATGGCCTAGTCAGCCATCATTGCAAAGAGAGGCCCATTGGCCTGTCAACAAGCATTaGTTGGCATCCACAGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: KRIKRWPSQPSLQREAHWPVNKH*LASTVV Trigger: CACTACTGTGGATGCCAACAAATGCTTGTTGACAGG...CCAATGGGCCTCTCTTTGCAATGATGGCTGACTAGGCCATCTTTTGATTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 72 bp | CTCTCTGTGTGTGTGTGTGTCTGTGTGTGTGTGTTCTaGTCAGCTCTAGACAGCTTTTTCTTGCTGTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LSVCVCVCVCVF*SALDSFFLLSF Trigger: AAAAGACAGCAAGAAAAAGCTGTCTAGAGCTGAGCAGAACACACACACACAGACACACACACACACAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR GCA 72 bp | GGCCTCAACAGATACAAGAAGATTGAAATAATCCCATaGATCCTATCAGGTCACCACAGACTAAGGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: GLNRYKKIEIIP*ILSGHHRLRLV Trigger: GACCAGCCTTAGTCTGTGGTGACCTGATAGGATGCATGGGATTATTTCAATCTTCTTGTATCTGTTGAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR TCA 72 bp | CGGTCACAAAACAGGCCTCAACAGATACAAGAAGATTaGAATAATCCCATGCATCCTATCAGGTCACCACAG | + |
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Preference number: 3 (lower is better) Translates to: RSQNRPQQIQED*NNPMHPIRSPQ Trigger: CTGTGGTGACCTGATAGGATGCATGGGATTATTTCAATCTTCTTGTATCTGTTGAGGCCTGTTTTGTGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR CCA 72 bp | AAGAATTTGAATGATGGCAAATTGACCCTTGACACTTaGAGGAGAGTTAGTCTTCCAAGGGTGGGCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KNLNDGKLTLDT*RRVSLPRVGFL Trigger: AAGGAAGCCCACCCTTGGAAGACTAACTCTCCTCCAAGTGTCAAGGGTCAATTTGCCATCATTCAAATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CCA 72 bp | AGCAATGCTCTCCTGCAGGTGGAGTGTATAGCAATCTaGCTTATCTCCTTCCTGAGTCTTAGATACATATTC | + |
|
Preference number: 3 (lower is better) Translates to: SNALLQVECIAI*LISFLSLRYIF Trigger: GAATATGTATCTAAGACTCAGGAAGGAGATAAGCCAGATTGCTATACACTCCACCTGCAGGAGAGCATTGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| 3UTR-3UTR CAA 90 bp | TCTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCGGAGCTCTGGAGGTCTaGGATGGTTCATATTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSSLVERAVSASKNFKSGALEV*DGSYCC Trigger: ACAACAATATGAACCATCCAAGACCTCCAGAGCTCC...GCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACCCTTGACCAGACTAACCAGAGGCCACAGAGACAGAATCTAAATTACCAATTATCTTCCTTCTTCTaGAGCTTATCTCTGATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTLDQTNQRPQRQNLNYQLSSFF*SLSLIV Trigger: GACTATCAGAGATAAGCTCAAGAAGAAGGAAGATAA...TTGGTAATTTAGATTCTGTCTCTGTGGCCTCTGGTTAGTCTGGTCAAGGGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR TCA 72 bp | CACAATGAAAGGAGTGCTAAGAGAAAAACTGAGCTATaGGTGCCTCCAAAAAGAAACTGGAAAGAGCATACA | + |
|
Preference number: 3 (lower is better) Translates to: HNERSAKRKTEL*VPPKRNWKEHT Trigger: TGTATGCTCTTTCCAGTTTCTTTTTGGAGGCACTCATAGCTCAGTTTTTCTCTTAGCACTCCTTTCATTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR TCA 72 bp | ACCCACATTTTTCTGCATATAAGAAACCTACTTCAGTaGCAAAGACAGACACTACCTCAGAGTAAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: THIFLHIRNLLQ*QRQTLPQSKRL Trigger: CAGCCTTTTACTCTGAGGTAGTGTCTGTCTTTGTCACTGAAGTAGGTTTCTTATATGCAGAAAAATGTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CCA 72 bp | AATAACAACATAACCAATAGAAAGTCCACATACATGTaGAAGCTGAACAACACTCTACTCAGTGATAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: NNNITNRKSTYM*KLNNTLLSDNL Trigger: CAAGTTATCACTGAGTAGAGTGTTGTTCAGCTTCCACATGTATGTGGACTTTCTATTGGTTATGTTGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CAA 72 bp | GCTCCTCCATTGGAGACCCTGGGCTCAGTCCATTGGTaGGCTGAGAGCATCCACCTCTATTTGTCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: APPLETLGSVHW*AESIHLYLSGT Trigger: AGTGCCTGACAAATAGAGGTGGATGCTCTCAGCCAACCAATGGACTGAGCCCAGGGTCTCCAATGGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CAA 72 bp | TGCAGCTGGAGCCATGGTTCCCTCCATGTGTACTCTTaGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSWSHGSLHVYS*VGGLVPGSSGG Trigger: ACCTCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTACACATGGAGGGAACCATGGCTCCAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGGGTGTAGTGACTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTGATTTGCCAGGAGGATaGGAGTGTGCCTGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGCSDCIWDGSPGGAVSDLPGG*ECAWTH Trigger: ATGTGTCCAGGCACACTCTCATCCTCCTGGCAAATC...AGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGGGTGTAGTGACTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTCATCTGTGTCAGGCATaGAGGGAATGTGGCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGCSDCIWDGSPGGAVSHLCQA*RECGFQ Trigger: TTGGAAGCCACATTCCCTGCATGCCTGACACAGATG...AGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR CCA 90 bp | CCTACACTGGGGCATCAAGCCTTCACAGGACCAAGTGCCTCTCCTCCCACTGAAAAAATGAGCAGCATTTaGGGTACCGTGACAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLGHQAFTGPSASPPTEKMSSI*GTVTVQ Trigger: CTGTACTGTCACGGTACCCCAAATGCTGCTCATTTT...TTCAGTGGGAGGAGAGGCACTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR TCA 90 bp | GACCAAGTGCCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATAAGAGGAGGACATCATTaGATGCCAACATGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DQVPLLPLKINKAILCYIRGGHH*MPTWPG Trigger: TCCTGGCCATGTTGGCATTCAATGATGTCCTCCTCT...TATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CAA 72 bp | GTCCCTGGGAGCTCTGGAGGTCTTGGATGGTTCATATaGTTGTTCCTTCTATGCGGCTGCAAACCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPGSSGGLGWFI*LFLLCGCKPHQ Trigger: TTGATGGGGTTTGCAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR GCA 90 bp | GACCAAGTGCCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATAGAGGACATCATTGAATaGCAACATGGCCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQVPLLPLKINKAILCYIEDIIE*QHGQEE Trigger: CTCTTCCTGGCCATGTTGGCATTCAATGATGTCCTC...TATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CAA 72 bp | CCTGGGAGCTCTGGAGGTCTTGGATGGTTCATATTGTaGTTCCTTCTATGCGGCTGCAAACCCCATCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSSGGLGWFIL*FLLCGCKPHQQ Trigger: TTGTTGATGGGGTTTGCAGCCGCATAGAAGGAACAACAATATGAACCATCCAAGACCTCCAGAGCTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGGGTGTAGTGACTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTATGGACATCCAAATCTaGATATCTTCTAATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGCSDCIWDGSPGGAVSMDIQI*ISSNPG Trigger: GCCAGGATTAGAAGATATTCAGATTTGGATGTCCAT...AGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR TCA 90 bp | TTAACCCTTGACCAGACTAACCAGAGGCCACAGAGACAGAATCTAAATTACCAAGGCCCTGCCAGAAAATaGGCAGCATTTGGGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLDQTNQRPQRQNLNYQGPARK*AAFGVP Trigger: CGGTACCCCAAATGCTGCTCATTTTCTGGCAGGGCC...TTGGTAATTTAGATTCTGTCTCTGTGGCCTCTGGTTAGTCTGGTCAAGGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR GCA 90 bp | ATAACTATCCAACGCATAGTGTTCAGCCTTGAAAACACCCACACCCACACCGCCGTCATAGACCACTACTaGCATGACCAGCACATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITIQRIVFSLENTHTHTAVIDHY*HDQHIS Trigger: GGAAATGTGCTGGTCATGGCAGTAGTGGTCTATGAC...GGCGGTGTGGGTGTGGGTGTTTTCAAGGCTGAACACTATGCGTTGGATAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS-3UTR CCA 90 bp | CTAAGAAGGACTGGAGTATCCACACTTTTATCTTCCTTCTTCTTGAGCTTATCTGGCATGCAGGGAATGTaGCTTCCAAGGGGCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRTGVSTLLSSFFLSLSGMQGM*LPRGPA Trigger: GGCAGGGCCCCTTGGAAGCCACATTCCCTGCATGCC...AGATAAGCTCAAGAAGAAGGAAGATAAAAGTGTGGATACTCCAGTCCTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTAAATACACCCCAGTGGAGTAGAAAGAAGGAAATTATTAAACTCAGGGCTAGTCCAGCCCTGTCGTaGGAAGAGCAGCTGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVNTPQWSRKKEIIKLRASPALS*EEQLRD Trigger: GTCTCTCAGCTGCTCTTCTCACGACAGGGCTGGACT...AGCCCTGAGTTTAATAATTTCCTTCTTTCTACTCCACTGGGGTGTATTTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTTGTGAGCTCCGCAGGTaGCAAAGGCTTTTGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKALWLRELYLLVKISRACELRR*QRLLSV Trigger: CACGGACAAAAGCCTTTGGCACCTGCGGAGCTCACA...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS-3UTR GCA 90 bp | CTAAGAAGGACTGGAGTATCCACACTTTTATCTTCCTTCTTCTTGAGCTTATCTGCTTCCAAGGGGCCCTaGCAGAAAATGAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LRRTGVSTLLSSFFLSLSASKGP*QKMSSI Trigger: AATGCTGCTCATTTTCTGGCAGGGCCCCTTGGAAGC...AGATAAGCTCAAGAAGAAGGAAGATAAAAGTGTGGATACTCCAGTCCTTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR CCA 90 bp | TTAACCCTTGACCAGACTAACCAGAGGCCACAGAGACAGAATCTAAATTACCAATGTTGCAAGCCAACTTaGCAATGCCCATGTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLDQTNQRPQRQNLNYQCCKPT*QCPCSH Trigger: GTGAGAACATGGGCATTGCCAAGTTGGCTTGCAACA...TTGGTAATTTAGATTCTGTCTCTGTGGCCTCTGGTTAGTCTGGTCAAGGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| 3UTR CAA 72 bp | CCAAAAAGAATCAAAAGATGGCCTAGTCAGCCATCATaGCAAAGAGAGGCCCATTGGACTTGCAAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PKRIKRWPSQPS*QREAHWTCKLY Trigger: ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAATGATGGCTGACTAGGCCATCTTTTGATTCTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS-3UTR TCA 90 bp | GAAGTAAATACACCCCAGTGGAGTAGAAAGAAGGAAATTATTAAACTCAGGGCTCGTGAGAAGAGCAGCTaGGAGACCATAAATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: EVNTPQWSRKKEIIKLRAREKSS*ETINAI Trigger: AATAGCATTTATGGTCTCTCAGCTGCTCTTCTCACG...AGCCCTGAGTTTAATAATTTCCTTCTTTCTACTCCACTGGGGTGTATTTACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS-3UTR CCA 90 bp | GAAGTAAATACACCCCAGTGGAGTAGAAAGAAGGAAATTATTAAACTCAGGGCTTGGTGCCCAAAGCGATaGGTAAAGAAAGAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVNTPQWSRKKEIIKLRAWCPKR*VKKEKK Trigger: CTTTTTCTCTTTCTTTACCCATCGCTTTGGGCACCA...AGCCCTGAGTTTAATAATTTCCTTCTTTCTACTCCACTGGGGTGTATTTACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS-3UTR TCA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTGACTTGAATAATGTTTaGGAACAGGTTCCTACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LKALWLRELYLLVKISRADLNNV*EQVPTT Trigger: AGTAGTAGGAACCTGTTCTCAAACATTATTCAAGTC...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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| CDS CCA 90 bp | GGGAATGTGGCTTCCAAGGGGCCCTGCCAGAAAATGAGCAGCATTTaGGGTACCGTGACAGTACAGAGGAGGACATCATTGAATGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GNVASKGPCQKMSSI*GTVTVQRRTSLNAN Trigger: GTTGGCATTCAATGATGTCCTCCTCTGTACTGTCACGGTACCCCAAATGCTGCTCATTTTCTGGCAGGGCCCCTTGGAAGCCACATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
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| CDS-3UTR CAA 90 bp | GACCAAGTGCCTCTCCTCCCACTGAAGATCAACAAGGCCATCCTCTGCTACATACAGAGGAGGACATCATaGAATGCCAACATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQVPLLPLKINKAILCYIQRRTS*NANMAR Trigger: CCTGGCCATGTTGGCATTCAATGATGTCCTCCTCTG...TATGTAGCAGAGGATGGCCTTGTTGATCTTCAGTGGGAGGAGAGGCACTTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTGGGTGTAGTGACTGTATATGGGATGGATCCCCAGGTGGGGCAGTCTCTAGGTGCCAAAGGCTTTaGTCCGTGCTTCTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSGCSDCIWDGSPGGAVSRCQRL*SVLLLM Trigger: CATCAAAAGAAGCACGGACAAAAGCCTTTGGCACCT...AGAGACTGCCCCACCTGGGGATCCATCCCATATACAGTCACTACACCCAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAAGCTCTCTGGTTGAGAGAGCTGTATCTGCTAGTAAAAATTTCAAGAGCTTTGTCCGTGCTTCTTTaGATGGCAGTTGTAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LKALWLRELYLLVKISRALSVLL*MAVVEQ Trigger: CTGTTCTACAACTGCCATCAAAAGAAGCACGGACAA...AGCTCTTGAAATTTTTACTAGCAGATACAGCTCTCTCAACCAGAGAGCTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS CCA 72 bp | GCTTCCAAGGGGCCCTGCCAGAAAATGAGCAGCATTTaGGGTACCGTGACAGTACAGAGGAGGACATCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ASKGPCQKMSSI*GTVTVQRRTSL Trigger: CAATGATGTCCTCCTCTGTACTGTCACGGTACCCCAAATGCTGCTCATTTTCTGGCAGGGCCCCTTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
||
| CDS TCA 72 bp | TTGGGGGTATCAGTAGATAGAGATTTGCCAGGAGGATaGGAGTGTGCCTGGACACATGGTGCCCAAAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LGVSVDRDLPGG*ECAWTHGAQSD Trigger: ATCGCTTTGGGCACCATGTGTCCAGGCACACTCTCATCCTCCTGGCAAATCTCTATCTACTGATACCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
||
| CDS TCA 72 bp | GTTCATGGAGGCTCCTGTCATAGACCACTACTGCCATaGCCAGCACATTTCCTAACACAGCCAAAACGTACA | + |
|
Preference number: 6 (lower is better) Translates to: VHGGSCHRPLLP*PAHFLTQPKRT Trigger: TGTACGTTTTGGCTGTGTTAGGAAATGTGCTGGTCATGGCAGTAGTGGTCTATGACAGGAGCCTCCATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
||
| CDS CAA 72 bp | CTCCGCAGGTGCCAAAGGCTTTTGTCCGTGCTTCTTTaGATGGCAGTTGTAGAACAGTTTTCAAGATTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRRCQRLLSVLL*MAVVEQFSRLA Trigger: GGCTAATCTTGAAAACTGTTCTACAACTGCCATCAAAAGAAGCACGGACAAAAGCCTTTGGCACCTGCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
||
| CDS CAA 90 bp | AAATGTGAGCTCCGCAGGTGCCAAAGGCTTTTGTCCGTGCTTCTTTaGATGGCAGTTGTAGAACAGTTTTCAAGATTAGCCAGTAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KCELRRCQRLLSVLL*MAVVEQFSRLASRT Trigger: TGTCCTACTGGCTAATCTTGAAAACTGTTCTACAACTGCCATCAAAAGAAGCACGGACAAAAGCCTTTGGCACCTGCGGAGCTCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119283.4 ENSMUST00000214347.2 |
||
| CDS TCA 72 bp | AATCCTGGCACACCAGTAAGCAGAAAGAAAGTGAGCTaGGTAGGTGTAGTGTTGAGTTCTCTTATTGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: NPGTPVSRKKVS*VGVVLSSLIVI Trigger: TATCACAATAAGAGAACTCAACACTACACCTACTCAGCTCACTTTCTTTCTGCTTACTGGTGTGCCAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
||
| CDS TCA 72 bp | CTGTTCTTTGCTGTTTCATTAGACTTGAATAATGTTTaGGAACAGGTTCCTACTACTCGCATCCTTATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFFAVSLDLNNV*EQVPTTRILIS Trigger: AGAGATAAGGATGCGAGTAGTAGGAACCTGTTCTCAAACATTATTCAAGTCTAATGAAACAGCAAAGAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214347.2 |
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