Pregenerated sensors for OLFR606 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073949Ensembl transcript IDs: ENSMUST00000098200.2, ENSMUST00000214631.2, ENSMUST00000217250.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGAGCCTGTCAGTAACTaGGTTGCCTCTAATTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLQARTEKPVTCITFLSNEPVSN*VASNFA Trigger: AGCAAAATTAGAGGCAACTCAGTTACTGACAGGCTC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGCTTTGCATGTGTTTTaGCTGAACACAACATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LLQARTEKPVTCITFLSNALHVF*LNTTCK Trigger: TTTGCATGTTGTGTTCAGGCAAAACACATGCAAAGC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATTGCATGTGTTTTGCCTaGACACAACATGCAAATATT | + |
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Preference number: 2 (lower is better) Translates to: LLQARTEKPVTCITFLSNCMCFA*TQHANI Trigger: AATATTTGCATGTTGTGTTCAGGCAAAACACATGCA...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATTGCTTTGCATGTGTTTaGCCTGAACACAACATGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLQARTEKPVTCITFLSNCFACV*PEHNMQ Trigger: TTGCATGTTGTGTTCAGGCAAAACACATGCAAAGCA...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGAGTTGCCTCTAATTTaGCTTTGCATGTGTTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: LLQARTEKPVTCITFLSNELPLI*LCMCFA Trigger: GGCAAAACACATGCAAAGCAAAATTAGAGGCAACTC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATCTGTCAGTAACTGAGTaGCCTCTAATTTTGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: LLQARTEKPVTCITFLSNLSVTE*PLILLC Trigger: GCAAAGCAAAATTAGAGGCAACTCAGTTACTGACAG...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR GCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATTGCACATGTGTTGAGTaGCTTAAGCCTACCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNCTCVE*LKPTLP Trigger: CGGGAGGGTAGGCTTAAGGCACTCAACACATGTGCA...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATATGTGGAGGACACACTaGCACTGGAATTTGACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNMWRTH*HWNLTV Trigger: CACCGTCAAATTCCAGTGTCAGTGTGTCCTCCACAT...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR GCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCTGCACATGTGTTGAGTaGCTTAAGCCTACCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCCTCVE*LKPTLP Trigger: CGGGAGGGTAGGCTTAAGGCACTCAACACATGTGCA...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATCAACACCCTGAAAAGTaGTACCATAGCAGGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNQHPEK*YHSRQG Trigger: TCCTTGCCTGCTATGGTATCACTTTTCAGGGTGTTG...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGGCCAAGAGCACAGATaGCTCAGTGAAGGAAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNGQEHR*LSEGKS Trigger: ACTTTTTCCTTCACTGAGTCATCTGTGCTCTTGGCC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATCACACTATAGATGATTaGGTTGAGCACTGGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNHTIDD*VEHWWH Trigger: GTGCCACCAGTGCTCAACCCAATCATCTATAGTGTG...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCCAACACCCTGAAAAGTaGTACCATAGCAGGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCQHPEK*YHSRQG Trigger: TCCTTGCCTGCTATGGTATCACTTTTCAGGGTGTTG...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGTACAATGTGCAAGATaGAACAGTTCCCTGTTACCC | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNVQCAR*NSSLLP Trigger: GGGTAACAGGGAACTGTTCCATCTTGCACATTGTAC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCAACGATCAAGAGCCATaGCCAAGAGCACAGATGACT | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCNDQEP*PRAQMT Trigger: AGTCATCTGTGCTCTTGGCCATGGCTCTTGATCGTT...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCCACACTATAGATGATTaGGTTGAGCACTGGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCHTIDD*VEHWWH Trigger: GTGCCACCAGTGCTCAACCCAATCATCTATAGTGTG...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR GCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATTCAGTTCGTACAATGTaGAAGATGGAACAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNSVRTM*KMEQFP Trigger: AGGGAACTGTTCCATCTTGCACATTGTACGAACTGA...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCGTACAATGTGCAAGATaGAACAGTTCCCTGTTACCC | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCVQCAR*NSSLLP Trigger: GGGTAACAGGGAACTGTTCCATCTTGCACATTGTAC...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATTGGGGACAGATCAAATaGAATATTCCTTGTCGGATC | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNWGQIK*NIPCRI Trigger: GATCCGACAAGGAATATTCCATTTGATCTGTCCCCA...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATACATTGCAGAAGAATTaGTTTTGTGGGGACAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNTLQKN*FCGDRS Trigger: TGATCTGTCCCCACAAAATCAATTCTTCTGCAATGT...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCTGGGGACAGATCAAATaGAATATTCCTTGTCGGATC | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCWGQIK*NIPCRI Trigger: GATCCGACAAGGAATATTCCATTTGATCTGTCCCCA...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCGCACAGATGACTCAGTaGAGGAAAAAGTATGAATCA | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCAQMTQ*RKKYES Trigger: TGATTCATACTTTTTCCTTCACTGAGTCATCTGTGC...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATAGTAAATATGAGCCATaGAGATATGAACAAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNSKYEP*RYEQRE Trigger: CTCCCTTTGTTCATATCTTCATGGCTCATATTTACT...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCACATTGCAGAAGAATTaGTTTTGTGGGGACAGATCA | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCTLQKN*FCGDRS Trigger: TGATCTGTCCCCACAAAATCAATTCTTCTGCAATGT...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR TCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCAGTAAATATGAGCCATaGAGATATGAACAAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCSKYEP*RYEQRE Trigger: CTCCCTTTGTTCATATCTTCATGGCTCATATTTACT...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATACGCAAATATTAAACTaGATTTCTCGGGAAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQARTEKPVTCITFLSNTQILN*ISREID Trigger: GTCTATTTCCCGAGAAATCCAGTTTAATATTTGCGT...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CCA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCACGCAAATATTAAACTaGATTTCTCGGGAAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: QHANIYHSVTSSVPIAFCTQILN*ISREID Trigger: GTCTATTTCCCGAGAAATCCAGTTTAATATTTGCGT...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CAA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCTGGGATGCACATGTGTaGAGTGCCTTAAGCCTACCC | + |
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Preference number: 5 (lower is better) Translates to: QHANIYHSVTSSVPIAFCWDAHV*SALSLP Trigger: GGGTAGGCTTAAGGCACTCAACACATGTGCATCCCA...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CAA 90 bp | TTATTACAGGCAAGAACAGAAAAGCCTGTGACTTGCATCACATTTCTCTCTAATGCAGAAGAATTGATTTaGTGGGGACAGATCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: LLQARTEKPVTCITFLSNAEELI*WGQIKW Trigger: CCATTTGATCTGTCCCCACAAAATCAATTCTTCTGC...ATTAGAGAGAAATGTGATGCAAGTCACAGGCTTTTCTGTTCTTGCCTGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CAA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCCAAATGGAATATTCCTaGTCGGATCTGCTTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QHANIYHSVTSSVPIAFCQMEYS*SDLLGL Trigger: AAGACCAAGCAGATCCGACAAGGAATATTCCATTTG...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS-3UTR CAA 90 bp | CAACATGCAAATATTTACCATAGTGTCACATCATCAGTACCAATAGCTTTTTGCGCAGAAGAATTGATTTaGTGGGGACAGATCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: QHANIYHSVTSSVPIAFCAEELI*WGQIKW Trigger: CCATTTGATCTGTCCCCACAAAATCAATTCTTCTGC...GCAAAAAGCTATTGGTACTGATGATGTGACACTATGGTAAATATTTGCATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS GCA 72 bp | ATGGGCTCGTGGAGTTTGGGGTCAGTTCGTACAATGTaGAAGATGGAACAGTTCCCTGTTACCCCAATAATG | + |
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Preference number: 6 (lower is better) Translates to: MGSWSLGSVRTM*KMEQFPVTPIM Trigger: CATTATTGGGGTAACAGGGAACTGTTCCATCTTGCACATTGTACGAACTGACCCCAAACTCCACGAGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098200.2 ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS TCA 72 bp | GATTTCTCGGGAAATAGACCACAACACCCTGAAAAGTaGTACCATAGCAGGCAAGGACATGGCCATGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: DFSGNRPQHPEK*YHSRQGHGHVS Trigger: ACTGACATGGCCATGTCCTTGCCTGCTATGGTATCACTTTTCAGGGTGTTGTGGTCTATTTCCCGAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098200.2 ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS CCA 72 bp | GTTCCCTGTTACCCCAATAATGTAGATAAGGCAGAATaGGATGGAAATCCAGTGGTGAAATTCCTCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: VPCYPNNVDKAE*DGNPVVKFLIA Trigger: GGCTATGAGGAATTTCACCACTGGATTTCCATCCCATTCTGCCTTATCTACATTATTGGGGTAACAGGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098200.2 ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS CCA 72 bp | ATTGCAGAAGAATTGATTTTGTGGGGACAGATCAAATaGAATATTCCTTGTCGGATCTGCTTGGTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: IAEELILWGQIK*NIPCRICLVFT Trigger: TGTGAAGACCAAGCAGATCCGACAAGGAATATTCCATTTGATCTGTCCCCACAAAATCAATTCTTCTGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098200.2 ENSMUST00000214631.2 ENSMUST00000217250.2 |
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| CDS TCA 72 bp | CCTCCCGGGATGCAATTCTTAACACTGAGTGAAGGATaGAAACATAAGTTATTAAAATACCCAAAGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: PPGMQFLTLSEG*KHKLLKYPKNP Trigger: TGGATTCTTTGGGTATTTTAATAACTTATGTTTTCATCCTTCACTCAGTGTTAAGAATTGCATCCCGGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098200.2 ENSMUST00000214631.2 ENSMUST00000217250.2 |
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