Pregenerated sensors for OLFR60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060112Ensembl transcript IDs: ENSMUST00000075470.2, ENSMUST00000210932.3, ENSMUST00000211031.3, ENSMUST00000215023.2, ENSMUST00000216027.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCCACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTaGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: GATLHVRSTILENGD*KSWLKGEGETHLAT Trigger: TGTGGCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CCA 90 bp | CTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATaGCTAAAGGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LHVRSTILENGDWKS*LKGEGETHLATGVF Trigger: GAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACATTGAGTaGAGAGTTTGGGAGGAGTTGGGAAAGGGGAACAAAATGATCAAC | + |
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Preference number: 1 (lower is better) Translates to: ERERERERERENNIE*RVWEELGKGNKMIN Trigger: GTTGATCATTTTGTTCCCCTTTCCCAACTCCTCCCAAACTCTCCACTCAATGTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CCA 90 bp | ATGAGTTCATTTTTGAAACTTATGCTTCATCTCTGCTCCATCAATTaGTCCTCTCTCCATGCCGATATCACCAGCTTTGACTACCATAGC | + |
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Preference number: 1 (lower is better) Translates to: MSSFLKLMLHLCSIN*SSLHADITSFDYHS Trigger: GCTATGGTAGTCAAAGCTGGTGATATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGATGAAGCATAAGTTTCAAAAATGAACTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR GCA 90 bp | GGACTAATATATATGAGTTCATTTTTGAAACTTATGCTTCATCTCTaGTCCATCAATTGGTCCTCTCTCCATGCCGATATCACCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GLIYMSSFLKLMLHL*SINWSSLHADITSF Trigger: AAAGCTGGTGATATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGATGAAGCATAAGTTTCAAAAATGAACTCATATATATTAGTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR TCA 90 bp | TTGTTTACATTGCCTCTAAGAATTCTGTTGTTTTGGAAGTTAAAGTaGGTGAAATTGTCCAGAGAAAGGTTTTCTGAAGCAGTGATAGGT | + |
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Preference number: 1 (lower is better) Translates to: LFTLPLRILLFWKLK*VKLSRERFSEAVIG Trigger: ACCTATCACTGCTTCAGAAAACCTTTCTCTGGACAATTTCACTCACTTTAACTTCCAAAACAACAGAATTCTTAGAGGCAATGTAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCCATGAGCCCACTGCCTaGCCACAGACCAAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GRRRNPLGHRCLLLCVLGHEPTA*PQTKRK Trigger: CTTTCTTTTGGTCTGTGGTCAGGCAGTGGGCTCATG...GCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATTGTTCTGGGCTGCCATaGTGGGAGGAAGCTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHCSGLP*WEEASL Trigger: TAGAGAAGCTTCCTCCCATCATGGCAGCCCAGAACA...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCTGTTCTGGGCTGCCATaGTGGGAGGAAGCTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGCSGLP*WEEASL Trigger: TAGAGAAGCTTCCTCCCATCATGGCAGCCCAGAACA...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGATCATTGTGGATGGTGTaGTGGGAGCATCCACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGSLWMV*WEHPLH Trigger: ATGGAGTGGATGCTCCCAGCACACCATCCACAATGA...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CAA 90 bp | AATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTaGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCTGCCATGATG | + |
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Preference number: 2 (lower is better) Translates to: NGDWKSWLKGEGETH*ATGVFFYVFWAAMM Trigger: CATCATGGCAGCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATGGCTATCATTGTGGATGGTGTaGTGGGAGCATCCACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: TLHVRSTILENGDWKSWLSLWMV*WEHPLH Trigger: ATGGAGTGGATGCTCCCAGCACACCATCCACAATGA...TAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCTATGTGTTCTGGGCTaGCATGATGGGAGGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHLCVLG*HDGRKL Trigger: AAGCTTCCTCCCATCATGGCAGCCCAGAACACATAG...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCTCTGCTCCATCAATTaGTCCTCTCTCCATGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHLCSIN*SSLHAD Trigger: ATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAG...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGATATGATCATTGTGGATaGTGTGCTGGGAGCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGYDHCG*CAGSIH Trigger: GTGGATGCTCCCAGCACACCATCCACAATGATCATA...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGAGGGGACTGGAAATCATaGCTAAAGGGAGAAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGGDWKS*LKGEGE Trigger: TTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCC...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTCTGCTCCATCAATTaGTCCTCTCTCCATGCCGAT | + |
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Preference number: 2 (lower is better) Translates to: DKDEERERERERERERERLCSIN*SSLHAD Trigger: ATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATGGCTAAAGGAGAAACCCACTTaGCCACAGGTGTCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TLHVRSTILENGDWKSWLKEKPT*PQVSSS Trigger: AGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTT...TAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCCAGAGAAAGGTTTTCTaGAGCAGTGATAGGTACACT | + |
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Preference number: 2 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGQRKVF*SSDRYT Trigger: AGTGTACCTATCACTGCTTCAGAAAACCTTTCTCTG...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCTTCCTTCTTTGCTTATaGTCATTGTGGATGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGFLLCL*SLWMVC Trigger: GCACACCATCCACAATGATCATAAGCAAAGAAGGAA...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGACTTTCGAAGACACTGTaGCCATGCAGAAGTTTATAT | + |
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Preference number: 2 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGLSKTL*PCRSLY Trigger: ATATAAACTTCTGCATGGCCACAGTGTCTTCGAAAG...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGAAAGGAGAAACCCACTTaGCCACAGGTGTCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRKEKPT*PQVSSS Trigger: AGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTT...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTATGCTTCATCTCTaGTCCATCAATTGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: DKDEERERERERERERERLMLHL*SINWSS Trigger: AGAGGACCAATTGATGGAGCAGAGATGAAGCATAAG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGACAGAGAAAGGTTTTCTaGAGCAGTGATAGGTACACT | + |
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Preference number: 2 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRQRKVF*SSDRYT Trigger: AGTGTACCTATCACTGCTTCAGAAAACCTTTCTCTG...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTCACTGATGGTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTTCTGACACAGAGAAAGGTTTTCTaGAGCAGTGATAGGTACACT | + |
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Preference number: 2 (lower is better) Translates to: GSLMVIGRHWMKGLYVLTQRKVF*SSDRYT Trigger: AGTGTACCTATCACTGCTTCAGAAAACCTTTCTCTG...TGTCAGAACATAAAGCCCTTTCATCCAGTGCCTCCCTATAACCATCAGTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACATTGAGTGGAGAGTTCCTTCTTTGCTTATaGTCATTGTGGATGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: ERERERERERERITLSGEFLLCL*SLWMVC Trigger: GCACACCATCCACAATGATCATAAGCAAAGAAGGAA...CTCTCCACTCAATGTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGACTTATGCTTCATCTCTaGTCCATCAATTGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRLMLHL*SINWSS Trigger: AGAGGACCAATTGATGGAGCAGAGATGAAGCATAAG...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAACTTATGCTTCATCTCTGCTCCATCAATTGGTCCTCTCTCCATGCCGAACCATTGTCACCCACTaGAAATCTTCTAGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FETYASSLLHQLVLSPCRTIVTH*KSSSSG Trigger: TCCTGAACTAGAAGATTTTCAGTGGGTGACAATGGT...TCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGATGAAGCATAAGTTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCGTTAGCTGTAGTTCAGAAACAAGGTTCACTGATGGTTATAGGGAGGCACACCATTGTCACCCACTaGAAATCTTCTAGTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSLAVVQKQGSLMVIGRHTIVTH*KSSSSG Trigger: TCCTGAACTAGAAGATTTTCAGTGGGTGACAATGGT...GTGCCTCCCTATAACCATCAGTGAACCTTGTTTCTGAACTACAGCTAACGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCAAGACACTGTGGCCATaGAGAAGTTTATATAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGKTLWP*RSLYKV Trigger: AACTTTATATAAACTTCTGCATGGCCACAGTGTCTT...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACATTGAGTGGAGAGCTTTCGAAGACACTGTaGCCATGCAGAAGTTTATAT | + |
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Preference number: 2 (lower is better) Translates to: ERERERERERERITLSGELSKTL*PCRSLY Trigger: ATATAAACTTCTGCATGGCCACAGTGTCTTCGAAAG...CTCTCCACTCAATGTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGACACTGTGGCCATaGAGAAGTTTATATAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: DKDEERERERERERERERKTLWP*RSLYKV Trigger: AACTTTATATAAACTTCTGCATGGCCACAGTGTCTT...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGAAAGACACTGTGGCCATaGAGAAGTTTATATAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRKTLWP*RSLYKV Trigger: AACTTTATATAAACTTCTGCATGGCCACAGTGTCTT...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CAA 90 bp | ATGATCAACATATATTGTATGAAGAAGTGTTTAGCATTTCCTTCTTaGCTTATGATCATTGTGGATGGTGTGCTGGGAGCATCCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: MINIYCMKKCLAFPS*LMIIVDGVLGASTP Trigger: TGGAGTGGATGCTCCCAGCACACCATCCACAATGATCATAAGCAAAGAAGGAAATGCTAAACACTTCTTCATACAATATATGTTGATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CAA 90 bp | AGTTTGGGAGGAGTTGGGAAAGGGGAACAAAATGATCAACATATATaGTATGAAGAAGTGTTTAGCATTTCCTTCTTTGCTTATGATCAT | + |
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Preference number: 2 (lower is better) Translates to: SLGGVGKGEQNDQHI*YEEVFSISFFAYDH Trigger: ATGATCATAAGCAAAGAAGGAAATGCTAAACACTTCTTCATACAATATATGTTGATCATTTTGTTCCCCTTTCCCAACTCCTCCCAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR TCA 72 bp | TGGGCTGCCATGATGGGAGGAAGCTTCTCTACCACATaGGCCCACTGCCTGACCACAGACCAAAAGAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: WAAMMGGSFSTT*AHCLTTDQKKE Trigger: CTCTTTCTTTTGGTCTGTGGTCAGGCAGTGGGCTCATGTGGTAGAGAAGCTTCCTCCCATCATGGCAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCTCTCTGCTCCATCAATaGGTCCTCTCTCCATGCCGA | + |
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Preference number: 3 (lower is better) Translates to: GRRRNPLGHRCLLLCVLGSLLHQ*VLSPCR Trigger: TCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGA...GCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR TCA 72 bp | CCACAGGTGTCTTCTTCTATGTGTTCTGGGCTGCCATaGTGGGAGGAAGCTTCTCTACCACATGAGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: PQVSSSMCSGLP*WEEASLPHEPT Trigger: AGTGGGCTCATGTGGTAGAGAAGCTTCCTCCCATCATGGCAGCCCAGAACACATAGAAGAAGACACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CCA 72 bp | ACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTaGGCTGCCATGATGGGAGGAAGCTTCTCTACCACA | + |
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Preference number: 3 (lower is better) Translates to: THLATGVFFYVF*AAMMGGSFSTT Trigger: TGTGGTAGAGAAGCTTCCTCCCATCATGGCAGCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CCA 72 bp | CGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATaGCTAAAGGGAGAAGGAGAAACCCACTTGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: RSTILENGDWKS*LKGEGETHLAT Trigger: TGTGGCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR TCA 72 bp | TGGGAGGAAGCTTCTCTACCACATGAGCCCACTGCCTaGCCACAGACCAAAAGAAAGAGCCAAATAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: WEEASLPHEPTA*PQTKRKSQIAM Trigger: CATGGCTATTTGGCTCTTTCTTTTGGTCTGTGGTCAGGCAGTGGGCTCATGTGGTAGAGAAGCTTCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR CCA 72 bp | AGCCACTCTCCATGTACGCAGCACCATCCTGGAAAATaGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHSPCTQHHPGK*GLEIMAKGRRR Trigger: TCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGATCTCTGCTCCATCAATaGGTCCTCTCTCCATGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRSLLHQ*VLSPCR Trigger: TCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGA...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGAAGAGAGAGAATAACATaGAGTGGAGAGTTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGRERIT*SGEFGR Trigger: CCTCCCAAACTCTCCACTCAATGTTATTCTCTCTCT...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR TCA 72 bp | TCTTTTCAGGTGACAGTGTTTCCAGAAATGATTCACTaGAGAAGGGGAGCCACTCTCCATGTACGCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: SFQVTVFPEMIH*RRGATLHVRST Trigger: GGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGAAACACTGTCACCTGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATGGCTACCGATATCACCAGCTTaGACTACCATAGCTAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLHVRSTILENGDWKSWLPISPA*TTIAKK Trigger: CTTCTTAGCTATGGTAGTCAAAGCTGGTGATATCGG...TAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATAGAGAGAGAATAACATaGAGTGGAGAGTTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHRERIT*SGEFGR Trigger: CCTCCCAAACTCTCCACTCAATGTTATTCTCTCTCT...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCGAGTGTTTGTTTACATaGCCTCTAAGAATTCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGECLFT*PLRILL Trigger: CAACAGAATTCTTAGAGGCAATGTAAACAAACACTC...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTTTGTTTACATaGCCTCTAAGAATTCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DKDEERERERERERERERECLFT*PLRILL Trigger: CAACAGAATTCTTAGAGGCAATGTAAACAAACACTC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR CCA 72 bp | TTTTTGAAACTTATGCTTCATCTCTGCTCCATCAATTaGTCCTCTCTCCATGCCGATATCACCAGCTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FLKLMLHLCSIN*SSLHADITSFD Trigger: GTCAAAGCTGGTGATATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGATGAAGCATAAGTTTCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR GCA 72 bp | TATATGAGTTCATTTTTGAAACTTATGCTTCATCTCTaGTCCATCAATTGGTCCTCTCTCCATGCCGATATC | + |
|
Preference number: 3 (lower is better) Translates to: YMSSFLKLMLHL*SINWSSLHADI Trigger: GATATCGGCATGGAGAGAGGACCAATTGATGGAGCAGAGATGAAGCATAAGTTTCAAAAATGAACTCATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCCTTGGGTCCACAGAATaGCAGCCGTGTCATCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GRRRNPLGHRCLLLCVLGLGSTE*QPCHQT Trigger: GGTCTGATGACACGGCTGTCATTCTGTGGACCCAAG...GCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCTGGACCATACACCCATaGCCAGAGCCCCACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRRRNPLGHRCLLLCVLGWTIHP*PEPHTT Trigger: AGTTGTGTGGGGCTCTGGCCATGGGTGTATGGTCCA...GCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATGAGCAGCAGCAGCTCTaGAGACAAGGACCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHEQQQL*RQGPHK Trigger: CTTGTGTGGTCCTTGTCTTCAGAGCTGCTGCTGCTC...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAGGAGAAACCCACTTGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCGCAGGATGCTGGCAATaGTGCAGCCATAGGATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRRRNPLGHRCLLLCVLGAGCWQ*CSHRIV Trigger: TACTATCCTATGGCTGCATCATTGCCAGCATCCTGC...GCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATGGCTAAGCTGGATGCAGGGCTaGCATAGGCACAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLHVRSTILENGDWKSWLSWMQG*HRHRTQ Trigger: CTGTGTTCTGTGCCTATGTCAGCCCTGCATCCAGCT...TAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCGTTAGCTGTAGTTCAGAAACAAGGTTCACTGATGGTTATAGGGAGGCACGACCAACCAGCGCCTTaGGCAGCACAGAGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLAVVQKQGSLMVIGRHDQPAP*AAQRRC Trigger: GCACCTCCTCTGTGCTGCCCAAGGCGCTGGTTGGTC...GTGCCTCCCTATAACCATCAGTGAACCTTGTTTCTGAACTACAGCTAACGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATAAGTACATGGGACTGTaGAGCCCAGTGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHKYMGL*SPVLKV Trigger: CACCTTCAGCACTGGGCTCCACAGTCCCATGTACTT...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGAGAGCAGCAGCAGCTCTaGAGACAAGGACCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRRSLGDTSVFSGDSVSREQQQL*RQGPHK Trigger: CTTGTGTGGTCCTTGTCTTCAGAGCTGCTGCTGCTC...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATGCAGGATGCTGGCAATaGTGCAGCCATAGGATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHAGCWQ*CSHRIV Trigger: TACTATCCTATGGCTGCATCATTGCCAGCATCCTGC...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGTACATGGGACTGTaGAGCCCAGTGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKDEERERERERERERERKYMGL*SPVLKV Trigger: CACCTTCAGCACTGGGCTCCACAGTCCCATGTACTT...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGATGGACCATACACCCATaGCCAGAGCCCCACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRWTIHP*PEPHTT Trigger: AGTTGTGTGGGGCTCTGGCCATGGGTGTATGGTCCA...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCGGAGAGCAGAAGGAGTaGGGGAATCTCACAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGGEQKE*GNLTEE Trigger: TTCTTCTGTGAGATTCCCCCACTCCTTCTGCTCTCC...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCATGTACGCAGCACCATCCTGGAAAATGGGGACTGGAAATCATGGCTAGGAGAGCAGAAGGAGTaGGGGAATCTCACAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLHVRSTILENGDWKSWLGEQKE*GNLTEE Trigger: TTCTTCTGTGAGATTCCCCCACTCCTTCTGCTCTCC...TAGCCATGATTTCCAGTCCCCATTTTCCAGGATGGTGCTGCGTACATGGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGAGATCACTAGGGGACACTTCTGTCTTTTCAGGTGACAGTGTTTCCAGATGGGCTATAGCTGGATaGAGGGCTGACATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRRSLGDTSVFSGDSVSRWAIAG*RADIGT Trigger: TGTGCCTATGTCAGCCCTGCATCCAGCTATAGCCCA...TCTGGAAACACTGTCACCTGAAAAGACAGAAGTGTCCCCTAGTGATCTCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGATGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCCCCACACAACTGTaGGCTCATTCTAGAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DKDEERERERERERERERSPTQL*AHSRAV Trigger: TACAGCTCTAGAATGAGCCCACAGTTGTGTGGGGCT...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCGTTAGCTGTAGTTCAGAAACAAGGTTCACTGATGGTTATAGGGAGGCACTGGACCATACACCCATaGCCAGAGCCCCACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSLAVVQKQGSLMVIGRHWTIHP*PEPHTT Trigger: AGTTGTGTGGGGCTCTGGCCATGGGTGTATGGTCCA...GTGCCTCCCTATAACCATCAGTGAACCTTGTTTCTGAACTACAGCTAACGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| 3UTR CAA 72 bp | TGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTaGGCCACAGGTGTCTTCTTCTATGTGTTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKSWLKGEGETH*ATGVFFYVFWA Trigger: AGCCCAGAACACATAGAAGAAGACACCTGTGGCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTAGAGCAGCAGCAGCTCTaGAGACAAGGACCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSDRYTLLRESALRKACLEQQQL*RQGPHK Trigger: CTTGTGTGGTCCTTGTCTTCAGAGCTGCTGCTGCTC...TAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATCACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | GATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTAGGAACAGAGCAGCAGCAGCTCTaGAGACAAGGACCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRYTLLRESALRKACLGTEQQQL*RQGPHK Trigger: CTTGTGTGGTCCTTGTCTTCAGAGCTGCTGCTGCTC...TGTTCCTAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | GATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTAGGAACAAGCTGGATGCAGGGCTaGCATAGGCACAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: DRYTLLRESALRKACLGTSWMQG*HRHRTQ Trigger: CTGTGTTCTGTGCCTATGTCAGCCCTGCATCCAGCT...TGTTCCTAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR GCA 90 bp | AATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATCCTGGAACCAGTGTTGATAGATaGATTCAGAGCACAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NDSLKKGSHSPCTQHHPGTSVDR*IQSTDG Trigger: TCCATCTGTGCTCTGAATGCATCTATCAACACTGGT...TCCAGGATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACATTGAGTGGAGAGAGCCCCACACAACTGTaGGCTCATTCTAGAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERERITLSGESPTQL*AHSRAV Trigger: TACAGCTCTAGAATGAGCCCACAGTTGTGTGGGGCT...CTCTCCACTCAATGTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGGTTCACTGATGGTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTGCAGGATGCTGGCAATaGTGCAGCCATAGGATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETRFTDGYREALDERALCAGCWQ*CSHRIV Trigger: TACTATCCTATGGCTGCATCATTGCCAGCATCCTGC...ACATAAAGCCCTTTCATCCAGTGCCTCCCTATAACCATCAGTGAACCTTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR GCA 90 bp | GTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTTCTGACAAATACCATTGTCTGGGCTATAGCTGGATaGAGGGCTGACATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VIGRHWMKGLYVLTNTIVWAIAG*RADIGT Trigger: TGTGCCTATGTCAGCCCTGCATCCAGCTATAGCCCA...GACAATGGTATTTGTCAGAACATAAAGCCCTTTCATCCAGTGCCTCCCTATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR GCA 90 bp | GATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTAGGAACATGGGCTATAGCTGGATaGAGGGCTGACATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DRYTLLRESALRKACLGTWAIAG*RADIGT Trigger: TGTGCCTATGTCAGCCCTGCATCCAGCTATAGCCCA...TGTTCCTAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGAAACTCCATTTCTCTCAACATTGGTCTTTCGAAGACACTGTGGCCATTGGGCTATAGCTGGATaGAGGGCTGACATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KEETPFLSTLVFRRHCGHWAIAG*RADIGT Trigger: TGTGCCTATGTCAGCCCTGCATCCAGCTATAGCCCA...ATGGCCACAGTGTCTTCGAAAGACCAATGTTGAGAGAAATGGAGTTTCTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
||
| CDS-3UTR CCA 90 bp | GAATCTGCTCTTAGGAAAGCATGTTTAGGAACAGCCCAGTCCAGGAAAATATTCAAGTACATGGGACTGTaGAGCCCAGTGCTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESALRKACLGTAQSRKIFKYMGL*SPVLKV Trigger: CACCTTCAGCACTGGGCTCCACAGTCCCATGTACTT...GAATATTTTCCTGGACTGGGCTGTTCCTAAACATGCTTTCCTAAGAGCAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAAACTCCATTTCTCTCAACATTGGTCTTTCGAAGACACTGTGGCCATAAGTACATGGGACTGTaGAGCCCAGTGCTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KEETPFLSTLVFRRHCGHKYMGL*SPVLKV Trigger: CACCTTCAGCACTGGGCTCCACAGTCCCATGTACTT...ATGGCCACAGTGTCTTCGAAAGACCAATGTTGAGAGAAATGGAGTTTCTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CCA 90 bp | GAAACTCCATTTCTCTCAACATTGGTCTTTCGAAGACACTGTGGCCATGCAGAAAGCCCCACACAACTGTaGGCTCATTCTAGAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ETPFLSTLVFRRHCGHAESPTQL*AHSRAV Trigger: TACAGCTCTAGAATGAGCCCACAGTTGTGTGGGGCT...TTCTGCATGGCCACAGTGTCTTCGAAAGACCAATGTTGAGAGAAATGGAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGTTCACTGATGGTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTGGAGAGCAGAAGGAGTaGGGGAATCTCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ETRFTDGYREALDERALCGEQKE*GNLTEE Trigger: TTCTTCTGTGAGATTCCCCCACTCCTTCTGCTCTCC...ACATAAAGCCCTTTCATCCAGTGCCTCCCTATAACCATCAGTGAACCTTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR TCA 90 bp | GTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTTCTGACAAATACCATTGTCGCAGGATGCTGGCAATaGTGCAGCCATAGGATAGTA | + |
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Preference number: 4 (lower is better) Translates to: VIGRHWMKGLYVLTNTIVAGCWQ*CSHRIV Trigger: TACTATCCTATGGCTGCATCATTGCCAGCATCCTGC...GACAATGGTATTTGTCAGAACATAAAGCCCTTTCATCCAGTGCCTCCCTATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR GCA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCTGCTCTGAGAAACCTTaGAGTATAAACTCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGCSEKP*SINSVT Trigger: AGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCA...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTGATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTAAGCCCCACACAACTGTaGGCTCATTCTAGAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SSDRYTLLRESALRKACLSPTQL*AHSRAV Trigger: TACAGCTCTAGAATGAGCCCACAGTTGTGTGGGGCT...TAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAAACTCCATTTCTCTCAACATTGGTCTTTCGAAGACACTGTGGCCATGGAGAGCAGAAGGAGTaGGGGAATCTCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: KEETPFLSTLVFRRHCGHGEQKE*GNLTEE Trigger: TTCTTCTGTGAGATTCCCCCACTCCTTCTGCTCTCC...ATGGCCACAGTGTCTTCGAAAGACCAATGTTGAGAGAAATGGAGTTTCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CAA 72 bp | TTGTGGATGGTGTGCTGGGAGCATCCACTCCATGCTTaGTGTGTAGTCATTTATCTACTTCTCCCTAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LWMVCWEHPLHA*CVVIYLLLPKL Trigger: CAGTTTAGGGAGAAGTAGATAAATGACTACACACAAAGCATGGAGTGGATGCTCCCAGCACACCATCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR GCA 90 bp | GGTTCACTGATGGTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTTCTGACATGCTCTGAGAAACCTTaGAGTATAAACTCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GSLMVIGRHWMKGLYVLTCSEKP*SINSVT Trigger: AGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCA...TGTCAGAACATAAAGCCCTTTCATCCAGTGCCTCCCTATAACCATCAGTGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR GCA 90 bp | GTTTCGTTAGCTGTAGTTCAGAAACAAGGTTCACTGATGGTTATAGGGAGGCACTGCTCTGAGAAACCTTaGAGTATAAACTCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: VSLAVVQKQGSLMVIGRHCSEKP*SINSVT Trigger: AGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCA...GTGCCTCCCTATAACCATCAGTGAACCTTGTTTCTGAACTACAGCTAACGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTGATAGGTACACTTTGCTCCGTGAATCTGCTCTTAGGAAAGCATGTTTATGCTCTGAGAAACCTTaGAGTATAAACTCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: SSDRYTLLRESALRKACLCSEKP*SINSVT Trigger: AGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCA...TAAACATGCTTTCCTAAGAGCAGATTCACGGAGCAAAGTGTACCTATCACTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| 3UTR CAA 72 bp | GGAGTTGGGAAAGGGGAACAAAATGATCAACATATATaGTATGAAGAAGTGTTTAGCATTTCCTTCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GVGKGEQNDQHI*YEEVFSISFFA Trigger: AGCAAAGAAGGAAATGCTAAACACTTCTTCATACAATATATGTTGATCATTTTGTTCCCCTTTCCCAACTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAAATGATTCACTGAAGAAGGGGAGCCACTCTCCATGTACGCAGCACCATAGACCAACCAGCGCCTaGGGCAGCACAGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SRNDSLKKGSHSPCTQHHRPTSA*GSTEEV Trigger: CACCTCCTCTGTGCTGCCCAAGGCGCTGGTTGGTCT...ATGGTGCTGCGTACATGGAGAGTGGCTCCCCTTCTTCAGTGAATCATTTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS GCA 90 bp | CAGCCTGTCAGGAACAGTCTTAGACTAGGGTGCTCTGAGAAACCTTaGAGTATAAACTCTGTCACTACTGTCTGGTTGAGTCGTGACATC | + |
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Preference number: 5 (lower is better) Translates to: QPVRNSLRLGCSEKP*SINSVTTVWLSRDI Trigger: GATGTCACGACTCAACCAGACAGTAGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCACCCTAGTCTAAGACTGTTCCTGACAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000075470.2 ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CAA 90 bp | GGAAAATGGGGACTGGAAATCATGGCTAAAGGGAGAAGGAGAAACCCACTTGGCGCAATGATCAAAATGTaGCCCATTAGAGCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: GKWGLEIMAKGRRRNPLGAMIKM*PIRAIT Trigger: TGTAATGGCTCTAATGGGCAACATTTTGATCATTGC...GCCAAGTGGGTTTCTCCTTCTCCCTTTAGCCATGATTTCCAGTCCCCATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACATTGAGTGGAGAGGCAATGATCAAAATGTaGCCCATTAGAGCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: ERERERERERERITLSGEAMIKM*PIRAIT Trigger: TGTAATGGCTCTAATGGGCAACATTTTGATCATTGC...CTCTCCACTCAATGTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CAA 90 bp | GAAACAAGGTTCACTGATGGTTATAGGGAGGCACTGGATGAAAGGGCTTTATGTGCAATGATCAAAATGTaGCCCATTAGAGCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: ETRFTDGYREALDERALCAMIKM*PIRAIT Trigger: TGTAATGGCTCTAATGGGCAACATTTTGATCATTGC...ACATAAAGCCCTTTCATCCAGTGCCTCCCTATAACCATCAGTGAACCTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS-3UTR CAA 90 bp | GAATCTGCTCTTAGGAAAGCATGTTTAGGAACAGCCCAGTCCAGGAAAATATTCGCAATGATCAAAATGTaGCCCATTAGAGCCATTACA | + |
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Preference number: 5 (lower is better) Translates to: ESALRKACLGTAQSRKIFAMIKM*PIRAIT Trigger: TGTAATGGCTCTAATGGGCAACATTTTGATCATTGC...GAATATTTTCCTGGACTGGGCTGTTCCTAAACATGCTTTCCTAAGAGCAGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS CCA 72 bp | GGACCATACACCCATGGCCAGAGCCCCACACAACTGTaGGCTCATTCTAGAGCTGTAGTGCAGGGGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPYTHGQSPTQL*AHSRAVVQGKA Trigger: TGCTTTCCCCTGCACTACAGCTCTAGAATGAGCCCACAGTTGTGTGGGGCTCTGGCCATGGGTGTATGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075470.2 ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS CAA 90 bp | ATGACCTTGGGTCCACAGAATGACAGCCGTGTCATCAGACCAGTGTaGATAGATGCATTCAGAGCACAGATGGACCATACACCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: MTLGPQNDSRVIRPV*IDAFRAQMDHTPMA Trigger: GGCCATGGGTGTATGGTCCATCTGTGCTCTGAATGCATCTATCAACACTGGTCTGATGACACGGCTGTCATTCTGTGGACCCAAGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000075470.2 ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS CAA 72 bp | GGTCCACAGAATGACAGCCGTGTCATCAGACCAGTGTaGATAGATGCATTCAGAGCACAGATGGACCATACA | + |
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Preference number: 6 (lower is better) Translates to: GPQNDSRVIRPV*IDAFRAQMDHT Trigger: TGTATGGTCCATCTGTGCTCTGAATGCATCTATCAACACTGGTCTGATGACACGGCTGTCATTCTGTGGACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000075470.2 ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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| CDS GCA 72 bp | AAGAAGCAGCCTGTCAGGAACAGTCTTAGACTAGGGTaGTCTGAGAAACCTTGCAGTATAAACTCTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: KKQPVRNSLRLG*SEKPCSINSVT Trigger: AGTGACAGAGTTTATACTGCAAGGTTTCTCAGAGCACCCTAGTCTAAGACTGTTCCTGACAGGCTGCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000075470.2 ENSMUST00000210932.3 ENSMUST00000211031.3 ENSMUST00000215023.2 ENSMUST00000216027.2 |
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