Pregenerated sensors for OLFR599 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073950Ensembl transcript IDs: ENSMUST00000098201.5, ENSMUST00000214329.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAGATACATTTGTATCTTTCACCTCTGTTTATCCCATGCTGACTaGTTTTGTCTTGAGAATATAGACTGGCTTTTCGTGAATCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: MRYICIFHLCLSHAD*FCLENIDWLFVNLH Trigger: ATGAAGATTCACGAAAAGCCAGTCTATATTCTCAAGACAAAACCAGTCAGCATGGGATAAACAGAGGTGAAAGATACAAATGTATCTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCATAGAACATATGCATAGATGTCACTGTTTACCATCAGGAAAAACACCTTTATCCCATGCTGACTaGTTTTGTCTTGAGAATATA | + |
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Preference number: 2 (lower is better) Translates to: RVIEHMHRCHCLPSGKTPLSHAD*FCLENI Trigger: TATATTCTCAAGACAAAACCAGTCAGCATGGGATAA...AGGTGTTTTTCCTGATGGTAAACAGTGACATCTATGCATATGTTCTATGACTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAGATTAGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTACTTGAGAATATAGACTaGCTTTTCGTGAATCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SRLVVLPRVAKLYCFYLVLENID*LFVNLH Trigger: ATGAAGATTCACGAAAAGCCAGTCTATATTCTCAAG...TACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACTAATCTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| 3UTR GCA 72 bp | TGTCACTGTTTACCATCAGGAAAAACACCTACATTTTaGTTTACAGAAAGCACAACAGGGTTGAAAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CHCLPSGKTPTF*FTESTTGLKER Trigger: TCTTTCTTTCAACCCTGTTGTGCTTTCTGTAAAGCAAAATGTAGGTGTTTTTCCTGATGGTAAACAGTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | TGTTTATCCCATGCTGACTGGTTTTGTCTTGAGAATATAGACTGGCTTTTCGTGGAATGCTTTGCTTCGTaGCTCTTTCTGAGGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: CLSHADWFCLENIDWLFVECFAS*LFLRKT Trigger: CGTCTTCCTCAGAAAGAGGCACGAAGCAAAGCATTC...CACGAAAAGCCAGTCTATATTCTCAAGACAAAACCAGTCAGCATGGGATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTATCCAAAACTGCACATaGTCCAGTCCAGGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVIQNCT*SSPGMP Trigger: TGGCATCCCTGGACTGGAGCATGTGCAGTTTTGGAT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | GTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTACATTACATTATCCAAAACTGCACATaGTCCAGTCCAGGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: VVLPRVAKLYCFYLVHYIIQNCT*SSPGMP Trigger: TGGCATCCCTGGACTGGAGCATGTGCAGTTTTGGAT...AATGTAATGTACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | GCTGACTGGTTTTGTCTTGAGAATATAGACTGGCTTTTCGTGAATCTTCATGAACCAGATTCCATTCCTTaGAAGGCATGGATGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ADWFCLENIDWLFVNLHEPDSIP*KAWMKK Trigger: CTTCTTCATCCATGCCTTGCAAGGAATGGAATCTGG...TTCATGAAGATTCACGAAAAGCCAGTCTATATTCTCAAGACAAAACCAGTCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCTTCGTGCCTCTTTCTaGGGAAGACGAAAAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVLRASF*GRRKTA Trigger: AGCTGTTTTTCGTCTTCCTCAGAAAGAGGCACGAAG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTGAATGCTTTGCTTCGTaGCTCTTTCTGAGGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVECFAS*LFLRKT Trigger: CGTCTTCCTCAGAAAGAGGCACGAAGCAAAGCATTC...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTATTCCTTGCAAGGCATaGATGAAGAAGAGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVIPCKA*MKKSWV Trigger: CACCCAGCTCTTCTTCATCCATGCCTTGCAAGGAAT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTAGTAGCTGCGAGTACTaGCAAGAAAATGTACATGGG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVSSCEY*QENVHG Trigger: CCCATGTACATTTTCTTGGCAGTACTCGCAGCTACT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCCAGATTCCATTCCTTaGAAGGCATGGATGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVPDSIP*KAWMKK Trigger: CTTCTTCATCCATGCCTTGCAAGGAATGGAATCTGG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTTTTGGACAACCCATTTaGGGATCTCCTTGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVFGQPI*GSPWSS Trigger: TGAAGACCAAGGAGATCCGCAAATGGGTTGTCCAAA...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGAGTCATAGAACATATGCATAGATGTCACTGTTTACCATCAGGAAAAACACCTAAAATGTACATGGGTTaGTGTAGACTGCGTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RVIEHMHRCHCLPSGKTPKMYMG*CRLRSV Trigger: CACAGAACGCAGTCTACACCAACCCATGTACATTTT...AGGTGTTTTTCCTGATGGTAAACAGTGACATCTATGCATATGTTCTATGACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTAAGCATCAAAAGCCATaGAACAGGAGCCAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVKHQKP*NRSQTR Trigger: TCTGGTTTGGCTCCTGTTCCATGGCTTTTGATGCTT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTACAATCACAACAGAGTaGAACCATTGCAGTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVTITTE*NHCSRL Trigger: CAAGCGACTGCAATGGTTCCACTCTGTTGTGATTGT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | TCTAGATTAGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTAACAATCACAACAGAGTaGAACCATTGCAGTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SRLVVLPRVAKLYCFYLVTITTE*NHCSRL Trigger: CAAGCGACTGCAATGGTTCCACTCTGTTGTGATTGT...TACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACTAATCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCGTACAAGTGTTGAATaGTTTGCTTCGTGCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVRTSVE*FASCLF Trigger: AAAGAGGCACGAAGCAAAGCATTCAACACTTGTACG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR GCA 90 bp | AGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTACATTACATCGTACAAGTGTTGAATaGTTTGCTTCGTGCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SCFATCSQIILLLPRTLHRTSVE*FASCLF Trigger: AAAGAGGCACGAAGCAAAGCATTCAACACTTGTACG...ATGTAATGTACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTAAAATGTACATGGGTTaGTGTAGACTGCGTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVKMYMG*CRLRSV Trigger: CACAGAACGCAGTCTACACCAACCCATGTACATTTT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCCAAGAAAATGTACATaGGTTGGTGTAGACTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVPRKCT*VGVDCV Trigger: AACGCAGTCTACACCAACCCATGTACATTTTCTTGG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | TCTAGATTAGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTACCAAGAAAATGTACATaGGTTGGTGTAGACTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: SRLVVLPRVAKLYCFYLVPRKCT*VGVDCV Trigger: AACGCAGTCTACACCAACCCATGTACATTTTCTTGG...TACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACTAATCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTATTTGCGGATCTCCTTaGTCTTCACACCATACACAA | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVICGSP*SSHHTQ Trigger: TTGTGTATGGTGTGAAGACCAAGGAGATCCGCAAAT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | TCTAGATTAGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTAATTTGCGGATCTCCTTaGTCTTCACACCATACACAA | + |
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Preference number: 4 (lower is better) Translates to: SRLVVLPRVAKLYCFYLVICGSP*SSHHTQ Trigger: TTGTGTATGGTGTGAAGACCAAGGAGATCCGCAAAT...TACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACTAATCTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCACAAAGAGCCCATATaGTTTATTAATACGGACATC | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVHKEPI*FINTDI Trigger: GATGTCCGTATTAATAAATCATATGGGCTCTTTGTG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTTTCAGAACAAAAATTTaGACAACCCATTTGCGGATC | + |
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Preference number: 4 (lower is better) Translates to: SSFNRQLSSFILTQYFHVFRTKI*TTHLRI Trigger: GATCCGCAAATGGGTTGTCCAAATTTTTGTTCTGAA...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CCA 90 bp | TCTAGATTAGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTATTCAGAACAAAAATTTaGACAACCCATTTGCGGATC | + |
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Preference number: 4 (lower is better) Translates to: SRLVVLPRVAKLYCFYLVFRTKI*TTHLRI Trigger: GATCCGCAAATGGGTTGTCCAAATTTTTGTTCTGAA...TACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACTAATCTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS GCA 90 bp | AAAGCCACAAGGCATACAACAAAGAAGGGAAATCCAATCCAAAACTaGACATGCTCCAGTCCAGGGATGCCAATCAGAATCACTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: KATRHTTKKGNPIQN*TCSSPGMPIRITVP Trigger: AGGGACAGTGATTCTGATTGGCATCCCTGGACTGGAGCATGTGCAGTTTTGGATTGGATTTCCCTTCTTTGTTGTATGCCTTGTGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS TCA 90 bp | AGTAAGAATGAACAATCACAACAGAGTGGAACCATTGCAGTCGCTTaGGGAGAATGGGTAAAACCCCAACGAGTACAGTTGCCCGAATTG | + |
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Preference number: 5 (lower is better) Translates to: SKNEQSQQSGTIAVA*GEWVKPQRVQLPEL Trigger: CAATTCGGGCAACTGTACTCGTTGGGGTTTTACCCATTCTCCTCAAGCGACTGCAATGGTTCCACTCTGTTGTGATTGTTCATTCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | TGTTTATCCCATGCTGACTGGTTTTGTCTTGAGAATATAGACTGGCTTTTCGTGATTTGGACAACCCATTaGCGGATCTCCTTGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CLSHADWFCLENIDWLFVIWTTH*RISLVF Trigger: GAAGACCAAGGAGATCCGCAAATGGGTTGTCCAAAT...CACGAAAAGCCAGTCTATATTCTCAAGACAAAACCAGTCAGCATGGGATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTGCCAGATTCCATTCCTaGCAAGGCATGGATGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSFNRQLSSFILTQYFHVARFHS*QGMDEE Trigger: TTCTTCATCCATGCCTTGCAAGGAATGGAATCTGGC...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGTTGTTTTGCCACGTGTAGCCAAATTATATTGCTTTTACCTCGTACATTACATGCCAGATTCCATTCCTaGCAAGGCATGGATGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SCFATCSQIILLLPRTLHARFHS*QGMDEE Trigger: TTCTTCATCCATGCCTTGCAAGGAATGGAATCTGGC...ATGTAATGTACGAGGTAAAAGCAATATAATTTGGCTACACGTGGCAAAACAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | GCTGACTGGTTTTGTCTTGAGAATATAGACTGGCTTTTCGTGAATCTTCATGAATGTCAAAACCTAGAATaGCAAAAGCCACAAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: ADWFCLENIDWLFVNLHECQNLE*QKPQRA Trigger: GGCTCTTTGTGGCTTTTGCAATTCTAGGTTTTGACA...TTCATGAAGATTCACGAAAAGCCAGTCTATATTCTCAAGACAAAACCAGTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCATTTGCGGATCTCCTaGGTCTTCACACCATACACA | + |
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Preference number: 5 (lower is better) Translates to: SSFNRQLSSFILTQYFHVHLRIS*VFTPYT Trigger: TGTGTATGGTGTGAAGACCAAGGAGATCCGCAAATG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTATTTGGACAACCCATTaGCGGATCTCCTTGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSFNRQLSSFILTQYFHVIWTTH*RISLVF Trigger: GAAGACCAAGGAGATCCGCAAATGGGTTGTCCAAAT...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTTGTCAAAACCTAGAATaGCAAAAGCCACAAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSFNRQLSSFILTQYFHVCQNLE*QKPQRA Trigger: GGCTCTTTGTGGCTTTTGCAATTCTAGGTTTTGACA...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGAGTCATAGAACATATGCATAGATGTCACTGTTTACCATCAGGAAAAACACCTCTTCAGAACAAAAATTaGGACAACCCATTTGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: RVIEHMHRCHCLPSGKTPLQNKN*DNPFAD Trigger: ATCCGCAAATGGGTTGTCCAAATTTTTGTTCTGAAG...AGGTGTTTTTCCTGATGGTAAACAGTGACATCTATGCATATGTTCTATGACTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214329.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTTTTAACAGGCAACTCTCTAGTTTCATTCTGACACAATATTTTCACGTTCTTCAGAACAAAAATTaGGACAACCCATTTGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSFNRQLSSFILTQYFHVLQNKN*DNPFAD Trigger: ATCCGCAAATGGGTTGTCCAAATTTTTGTTCTGAAG...AACGTGAAAATATTGTGTCAGAATGAAACTAGAGAGTTGCCTGTTAAAACTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS GCA 72 bp | ATCCAATCCAAAACTGCACATGCTCCAGTCCAGGGATaGCAATCAGAATCACTGTCCCTGGGTTCAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: IQSKTAHAPVQG*QSESLSLGSGM Trigger: CATACCTGAACCCAGGGACAGTGATTCTGATTGGCATCCCTGGACTGGAGCATGTGCAGTTTTGGATTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS GCA 72 bp | AGGCATACAACAAAGAAGGGAAATCCAATCCAAAACTaGACATGCTCCAGTCCAGGGATGCCAATCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: RHTTKKGNPIQN*TCSSPGMPIRI Trigger: GATTCTGATTGGCATCCCTGGACTGGAGCATGTGCAGTTTTGGATTGGATTTCCCTTCTTTGTTGTATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS GCA 72 bp | AATATGAGCCGTACAAGTGTTGAATGCTTTGCTTCGTaGCTCTTTCTGAGGAAGACGAAAAACAGCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: NMSRTSVECFAS*LFLRKTKNSSE Trigger: TTCCGAGCTGTTTTTCGTCTTCCTCAGAAAGAGGCACGAAGCAAAGCATTCAACACTTGTACGGCTCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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| CDS GCA 72 bp | CAGGAAGACAACAATATGAGCCGTACAAGTGTTGAATaGTTTGCTTCGTGCCTCTTTCTGAGGAAGACGAAA | + |
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Preference number: 6 (lower is better) Translates to: QEDNNMSRTSVE*FASCLFLRKTK Trigger: TTTCGTCTTCCTCAGAAAGAGGCACGAAGCAAAGCATTCAACACTTGTACGGCTCATATTGTTGTCTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098201.5 ENSMUST00000214329.3 |
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