RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR597 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073952

Ensembl transcript IDs: ENSMUST00000098203.4, ENSMUST00000216456.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATATTCCATATAGTTTTTATTTTAGTCGATCTGTAATTGTGGAATaGAATCCCTTCATGGTCCATGAGGAGAAGATGAAACCCTATAGT +
Preference number: 1 (lower is better)
Translates to: HIPYSFYFSRSVIVE*NPFMVHEEKMKPYS
Trigger: ACTATAGGGTTTCATCTTCTCCTCATGGACCATGAAGGGATTCCATTCCACAATTACAGATCGACTAAAATAAAAACTATATGGAATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
3UTR-3UTR TCA 90 bp AGAATATGCTTCCTGCCCACAGAGATGAGAAAAAGGTGTCAGATTTCCTCAATCAGGCAGGCAGATTTCTaGGTTCAAGGCCAGCCCGGT +
Preference number: 2 (lower is better)
Translates to: RICFLPTEMRKRCQISSIRQADF*VQGQPG
Trigger: ACCGGGCTGGCCTTGAACTCAGAAATCTGCCTGCCT...GATTGAGGAAATCTGACACCTTTTTCTCATCTCTGTGGGCAGGAAGCATATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
3UTR-3UTR CCA 90 bp CTTCATTTCTTCAGGCCAGTGGTTTATTTTGAGCTGGAGAGATGTCTTTGTTTCACAGGAATGGAGACATaGTATCAGTCATATTCCATA +
Preference number: 2 (lower is better)
Translates to: LHFFRPVVYFELERCLCFTGMET*YQSYSI
Trigger: TATGGAATATGACTGATACCATGTCTCCATTCCTGT...GAAACAAAGACATCTCTCCAGCTCAAAATAAACCACTGGCCTGAAGAAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
3UTR-3UTR CCA 90 bp AGAGATGAGAAAAAGGTGTCAGATTTCCTCAATCTGAAGTTACAAATGATTGTGTCTGTAATTGTGGAATaGAATCCCTTCATGGTCCAT +
Preference number: 2 (lower is better)
Translates to: RDEKKVSDFLNLKLQMIVSVIVE*NPFMVH
Trigger: ATGGACCATGAAGGGATTCCATTCCACAATTACAGA...CACAATCATTTGTAACTTCAGATTGAGGAAATCTGACACCTTTTTCTCATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
3UTR TCA 72 bp TGGAATGGAATCCCTTCATGGTCCATGAGGAGAAGATaGAACCCTATAGTAAACACAGAGCACAGACCTTAC +
Preference number: 3 (lower is better)
Translates to: WNGIPSWSMRRR*NPIVNTEHRPY
Trigger: GTAAGGTCTGTGCTCTGTGTTTACTATAGGGTTTCATCTTCTCCTCATGGACCATGAAGGGATTCCATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
3UTR CCA 72 bp TATAGTTTTTATTTTAGTCGATCTGTAATTGTGGAATaGAATCCCTTCATGGTCCATGAGGAGAAGATGAAA +
Preference number: 3 (lower is better)
Translates to: YSFYFSRSVIVE*NPFMVHEEKMK
Trigger: TTTCATCTTCTCCTCATGGACCATGAAGGGATTCCATTCCACAATTACAGATCGACTAAAATAAAAACTATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS-3UTR CCA 90 bp CCCGGTCTACAGAGTGAGTTTAGGACAGGCAGGGCTACACAGAGAAACCCTGTCAGTGGGCAATTTGAATaGACCAAAAATGGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: PGLQSEFRTGRATQRNPVSGQFE*TKNGAV
Trigger: GACTGCACCATTTTTGGTCCATTCAAATTGCCCACT...GACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTAAACTCACTCTGTAGACCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS-3UTR CCA 90 bp CCCGGTCTACAGAGTGAGTTTAGGACAGGCAGGGCTACACAGAGAAACCCTGTCACAGAAGAATGTGAGTaGAGGGAACAACATGACCAA +
Preference number: 4 (lower is better)
Translates to: PGLQSEFRTGRATQRNPVTEECE*REQHDQ
Trigger: TTGGTCATGTTGTTCCCTCCACTCACATTCTTCTGT...GACAGGGTTTCTCTGTGTAGCCCTGCCTGTCCTAAACTCACTCTGTAGACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS-3UTR TCA 90 bp AACCCTATAGTAAACACAGAGCACAGACCTTACCTATTTCTACAAGGCAATAGCACTGTAAGGTATGGATaGAGAAGAGTTGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: NPIVNTEHRPYLFLQGNSTVRYG*RRVGLG
Trigger: GCCTAGCCCAACTCTTCTTCATCCATACCTTACAGT...GCTATTGCCTTGTAGAAATAGGTAAGGTCTGTGCTCTGTGTTTACTATAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS-3UTR TCA 90 bp AACCCTATAGTAAACACAGAGCACAGACCTTACCTATTTCTACAAGGCAATAGCGAGGAGGTAGATGGTTaGCAGAAGAATGTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: NPIVNTEHRPYLFLQGNSEEVDG*QKNVSG
Trigger: TCCACTCACATTCTTCTGTCAACCATCTACCTCCTC...GCTATTGCCTTGTAGAAATAGGTAAGGTCTGTGCTCTGTGTTTACTATAGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS-3UTR CCA 90 bp CTTCATTTCTTCAGGCCAGTGGTTTATTTTGAGCTGGAGAGATGTCTTTGTTTCAGGCGAAAAACAGCTTaGAAAATCAGGGCATATGAT +
Preference number: 4 (lower is better)
Translates to: LHFFRPVVYFELERCLCFRRKTA*KIRAYD
Trigger: ATCATATGCCCTGATTTTCCAAGCTGTTTTTCGCCT...GAAACAAAGACATCTCTCCAGCTCAAAATAAACCACTGGCCTGAAGAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216456.2
CDS GCA 90 bp ACCAGACACACTGTAAAGAATGGAAATCCAATCCAAAACTGCACGTaGTCTAGTCCAGGAATTCCAATCAGTATTACAGTTCCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: TRHTVKNGNPIQNCT*SSPGIPISITVPGF
Trigger: GAACCCTGGAACTGTAATACTGATTGGAATTCCTGGACTAGAGCACGTGCAGTTTTGGATTGGATTTCCATTCTTTACAGTGTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098203.4
ENSMUST00000216456.2
CDS GCA 72 bp GGGGGCAATGGCTGCACAAAGTCCTATGTCTGTACCTaGCAGCACAGCCAGGAAGATGTACATGGGTTGGTG +
Preference number: 6 (lower is better)
Translates to: GGNGCTKSYVCT*QHSQEDVHGLV
Trigger: CACCAACCCATGTACATCTTCCTGGCTGTGCTGGCAGGTACAGACATAGGACTTTGTGCAGCCATTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098203.4
ENSMUST00000216456.2
CDS TCA 72 bp TCGAATTACCACCACCACTATCATCCGACCAAGAATTaGAGGTGTAAGAATAGATGTGTGCCTCAGAGGATC +
Preference number: 6 (lower is better)
Translates to: SNYHHHYHPTKN*RCKNRCVPQRI
Trigger: GATCCTCTGAGGCACACATCTATTCTTACACCTTCAATTCTTGGTCGGATGATAGTGGTGGTGGTAATTCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098203.4
ENSMUST00000216456.2
CDS CAA 72 bp AGAATGCTAAACCCCACAAAAAGACCACATATCTTATaGACCTGTACATCATCTGCTGCAAGCTTCACCACA +
Preference number: 6 (lower is better)
Translates to: RMLNPTKRPHIL*TCTSSAASFTT
Trigger: TGTGGTGAAGCTTGCAGCAGATGATGTACAGGTCAATAAGATATGTGGTCTTTTTGTGGGGTTTAGCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098203.4
ENSMUST00000216456.2
CDS GCA 72 bp AGACACACTGTAAAGAATGGAAATCCAATCCAAAACTaGACGTGCTCTAGTCCAGGAATTCCAATCAGTATT +
Preference number: 6 (lower is better)
Translates to: RHTVKNGNPIQN*TCSSPGIPISI
Trigger: AATACTGATTGGAATTCCTGGACTAGAGCACGTGCAGTTTTGGATTGGATTTCCATTCTTTACAGTGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098203.4
ENSMUST00000216456.2