Pregenerated sensors for OLFR59 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070374Ensembl transcript IDs: ENSMUST00000143976.4, ENSMUST00000205790.2, ENSMUST00000206659.2, ENSMUST00000214048.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCTTCAACATCTAAAGTTGCCTTCACAAGACCATACCAGGTCCTaGCCGCAGTTTAAGAGCTGCTTGCATTCAGCTTCTTTTGATGAG | + |
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Preference number: 1 (lower is better) Translates to: SLQHLKLPSQDHTRS*PQFKSCLHSASFDE Trigger: CTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGTCTTGTGAAGGCAACTTTAGATGTTGAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 90 bp | TTGCCTTCACAAGACCATACCAGGTCCTGCCCGCAGTTTAAGAGCTaGTTGCATTCAGCTTCTTTTGATGAGGGAGAATCAATTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LPSQDHTRSCPQFKS*LHSASFDEGESIFF Trigger: AAAGAAAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGTCTTGTGAAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR TCA 90 bp | GCTTGCATTCAGCTTCTTTTGATGAGGGAGAATCAATTTTCTTTATaGAAAGCAACTGTGGAAGGTTGCCAGCATCCTAGTATTCAATCA | + |
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Preference number: 1 (lower is better) Translates to: ACIQLLLMRENQFSL*KATVEGCQHPSIQS Trigger: TGATTGAATACTAGGATGCTGGCAACCTTCCACAGTTGCTTTTCATAAAGAAAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 90 bp | CTCAAAACAGAACAGATTCTGAAAACTGTCAGACAGTACCATCATTaGAAGAACTTCATAGAGTGTACAGACATAAACATAAACGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LKTEQILKTVRQYHH*KNFIECTDININGS Trigger: TGAACCGTTTATGTTTATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTGTTCTGTTTTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCGAATGTGGGGAATATTaGAGAAAGTGGGTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLSLEMYSDRESSSLRTSECGEY*RKWVGE Trigger: CTCCCCCACCCACTTTCTCCAATATTCCCCACATTC...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCTCAGGGAATGGAGTGTaGCAAAATACACGGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLSLEMYSDRESSSLRTSSGNGV*QNTRSS Trigger: TGAACTCCGTGTATTTTGTCACACTCCATTCCCTGA...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CCA 90 bp | AATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGAGAGGGAATGTGGGGAATATTaGAGAAAGTGGGTGGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NDNKIQGPRRVRTTVEERECGEY*RKWVGE Trigger: CTCCCCCACCCACTTTCTCCAATATTCCCCACATTC...CCTCTCTTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 90 bp | CCTTCACAAGACCATACCAGGTCCTGCCCGCAGTTTAAGAGCTGCTaGCATTCAGCTTCTTTTGATGAGGGAGAATCAATTTTCTTTATG | + |
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Preference number: 2 (lower is better) Translates to: PSQDHTRSCPQFKSC*HSASFDEGESIFFM Trigger: CATAAAGAAAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGTCTTGTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGGAACTCTTCAAAACAATGTTCTCTGGACATGGCAGGGATGTTACATTCATCGAGGTAGACATTTCTaGAAGATCCTCAGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GGTLQNNVLWTWQGCYIHRGRHF*KILSRA Trigger: TGCTCTGCTGAGGATCTTTCAGAAATGTCTACCTCG...ATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCAAACAGAACAGATTCTaGAAACTGTCAGACAGTACC | + |
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Preference number: 2 (lower is better) Translates to: LLSLEMYSDRESSSLRTSKQNRF*KLSDST Trigger: GGTACTGTCTGACAGTTTTCAGAATCTGTTCTGTTT...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTCAGTGCTCTGTGTTGTaGATAACTACATGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: FLLSLEMYSDRESSSLRTQCSVL*ITTCAR Trigger: TCTAGCACATGTAGTTATGCACAACACAGAGCACTG...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTTATCACCACCATCAGTaGTCTGTGTTGTGCATAACT | + |
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Preference number: 2 (lower is better) Translates to: FLLSLEMYSDRESSSLRTYHHHQ*SVLCIT Trigger: AGTTATGCACAACACAGAGCACTGATGGTGGTGATA...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAACTCTTCAAAACAATGTTCTCTGGACATGGCAGGGATGTTACATTCATGCAACTGTGGAAGGTTaGCAGCATCCTAGTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: GGTLQNNVLWTWQGCYIHATVEG*QHPSIQ Trigger: TTGAATACTAGGATGCTGGCAACCTTCCACAGTTGC...ATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAACTCTTCAAAACAATGTTCTCTGGACATGGCAGGGATGTTACATTCATAGAAGGGTCAGGGAATaGAGTGTGACAAAATACACG | + |
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Preference number: 2 (lower is better) Translates to: GGTLQNNVLWTWQGCYIHRRVRE*SVTKYT Trigger: CGTGTATTTTGTCACACTCCATTCCCTGACCCTTCT...ATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAATGTTCTCTGGACATaGCAGGGATGTTACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: FLLSLEMYSDRESSSLRTNVLWT*QGCYIH Trigger: ATGAATGTAACATCCCTGCCATGTCCAGAGAACATT...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGTTTAAGAGCTGCTTaGATTCAGCTTCTTTTGATG | + |
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Preference number: 2 (lower is better) Translates to: FLLSLEMYSDRESSSLRTSLRAA*IQLLLM Trigger: CATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACT...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTACAGACATATCAGGGAATGGAGTGTaGCAAAATACACGGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: KTVRQYHHCKNFIECTDISGNGV*QNTRSS Trigger: TGAACTCCGTGTATTTTGTCACACTCCATTCCCTGA...TATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTAATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAAAGGGCCAGAGATCTTaGAGGAACTCTTCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: VCNDNKIQGPRRVRTTVEKGQRS*RNSSKQ Trigger: TTGTTTTGAAGAGTTCCTCCAAGATCTCTGGCCCTT...TTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATTACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 90 bp | AGTTCATGTATAAATGCATATACAATAGAAGAAGAGGACATAAATTaGAGAGTGGAATGTGGGGAATATTGGAGAAAGTGGGTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSCINAYTIEEEDIN*RVECGEYWRKWVGE Trigger: CTCCCCCACCCACTTTCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATTGTATATGCATTTATACATGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | AATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGAGAGGAACAGTTGTCTTGAATaGAATCTGTCACTGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: NDNKIQGPRRVRTTVEERNSCLE*NLSLTK Trigger: TTTAGTCAGTGACAGATTGCATTCAAGACAACTGTT...CCTCTCTTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTACAGACATAAACAGTTGTCTTGAATaGAATCTGTCACTGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: KTVRQYHHCKNFIECTDINSCLE*NLSLTK Trigger: TTTAGTCAGTGACAGATTGCATTCAAGACAACTGTT...TATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | CAAGACCATACCAGGTCCTGCCCGCAGTTTAAGAGCTaGTTGCATTCAGCTTCTTTTGATGAGGGAGAATCA | + |
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Preference number: 3 (lower is better) Translates to: QDHTRSCPQFKS*LHSASFDEGES Trigger: TGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | AATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGAGAGGGGAATGTGGGGAATATaGGAGAAAGTGGGTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: NDNKIQGPRRVRTTVEERGMWGI*EKVGGG Trigger: TCCCCCACCCACTTTCTCCAATATTCCCCACATTCC...CCTCTCTTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CCA 72 bp | GAGGACATAAATTTGAGAGTGGAATGTGGGGAATATTaGAGAAAGTGGGTGGGGGAGGGTGGATATGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: EDINLRVECGEY*RKWVGEGGYEQ Trigger: TTGCTCATATCCACCCTCCCCCACCCACTTTCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | ACCATACCAGGTCCTGCCCGCAGTTTAAGAGCTGCTTaGATTCAGCTTCTTTTGATGAGGGAGAATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: TIPGPARSLRAA*IQLLLMRENQF Trigger: AAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | CTAGTCTTTTATCACCACCATCAGTGCTCTGTGTTGTaGATAACTACATGTGCTAGACTCTTTGGGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LVFYHHHQCSVL*ITTCARLFGAW Trigger: CCATGCCCCAAAGAGTCTAGCACATGTAGTTATGCACAACACAGAGCACTGATGGTGGTGATAAAAGACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | TGCAAGGGAAGAATGCAATCAGTAATCCTACACAGCTaGAAAGCCTACCAACAACGACTGACCCTGAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: CKGRMQSVILHS*KAYQQRLTLKD Trigger: ATCTTTCAGGGTCAGTCGTTGTTGGTAGGCTTTGCAGCTGTGTAGGATTACTGATTGCATTCTTCCCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CCA 72 bp | AATAGAAGAAGAGGACATAAATTTGAGAGTGGAATGTaGGGAATATTGGAGAAAGTGGGTGGGGGAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: NRRRGHKFESGM*GILEKVGGGGW Trigger: CCACCCTCCCCCACCCACTTTCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTGTAATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGGAATGTGGGGAATATaGGAGAAAGTGGGTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: VCNDNKIQGPRRVRTTVEGMWGI*EKVGGG Trigger: TCCCCCACCCACTTTCTCCAATATTCCCCACATTCC...TTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATTACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | GACAGTTACCACCTAGTCTTTTATCACCACCATCAGTaGTCTGTGTTGTGCATAACTACATGTGCTAGACTC | + |
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Preference number: 3 (lower is better) Translates to: DSYHLVFYHHHQ*SVLCITTCARL Trigger: GAGTCTAGCACATGTAGTTATGCACAACACAGAGCACTGATGGTGGTGATAAAAGACTAGGTGGTAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CCA 72 bp | CTTGGAGGAACTCTTCAAAACAATGTTCTCTGGACATaGCAGGGATGTTACATTCATGAGCCTTCAACATCT | + |
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Preference number: 3 (lower is better) Translates to: LGGTLQNNVLWT*QGCYIHEPSTS Trigger: AGATGTTGAAGGCTCATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGGAACTCTTCAAAACAATGTTCTCTGGACATGGCAGGGATGTTACATTCATCTTCAACATCTAAAGTaGCCTTCACAAGACCATACC | + |
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Preference number: 3 (lower is better) Translates to: GGTLQNNVLWTWQGCYIHLQHLK*PSQDHT Trigger: GGTATGGTCTTGTGAAGGCAACTTTAGATGTTGAAG...ATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | CAGATTCTGAAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTGAAGAGGACATAAATTaGAGAGTGGAATGTGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: QILKTVRQYHHCKNFIECEEDIN*RVECGE Trigger: TTCCCCACATTCCACTCTCAAATTTATGTCCTCTTC...ACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR TCA 72 bp | AGGACAGTCACACATATCTCAAAACAGAACAGATTCTaGAAACTGTCAGACAGTACCATCATTGCAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: RTVTHISKQNRF*KLSDSTIIART Trigger: AGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTGTTCTGTTTTGAGATATGTGTGACTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | CAGATTCTGAAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTTGCATTCAGCTTCTTTaGATGAGGGAGAATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: QILKTVRQYHHCKNFIECCIQLL*MRENQF Trigger: AAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCA...ACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR-3UTR CAA 90 bp | AAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTACAGACATATGCATTCAGCTTCTTTaGATGAGGGAGAATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: KTVRQYHHCKNFIECTDICIQLL*MRENQF Trigger: AAATTGATTCTCCCTCATCAAAAGAAGCTGAATGCA...TATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR TCA 72 bp | CCCTGTTCCAAAGTGCTTCACAGATTTTTAGAATTATaGCTCCTGAAAGATATAGTTCTCCATGAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PCSKVLHRFLEL*LLKDIVLHEKR Trigger: TCTTTTCTCATGGAGAACTATATCTTTCAGGAGTCATAATTCTAAAAATCTGTGAAGCACTTTGGAACAGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR GCA 72 bp | GAACAGATTCTGAAAACTGTCAGACAGTACCATCATTaGAAGAACTTCATAGAGTGTACAGACATAAACATA | + |
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Preference number: 3 (lower is better) Translates to: EQILKTVRQYHH*KNFIECTDINI Trigger: TATGTTTATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCGGGCAGAAGGGACCCTaGGGATGGCTGAAACAATGC | + |
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Preference number: 4 (lower is better) Translates to: LLSLEMYSDRESSSLRTSGQKGP*GWLKQC Trigger: GCATTGTTTCAGCCATCCTCAGGGTCCCTTCTGCCC...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTGGGCAGAAGGGACCCTaGGGATGGCTGAAACAATGC | + |
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Preference number: 4 (lower is better) Translates to: FLLSLEMYSDRESSSLRTGQKGP*GWLKQC Trigger: GCATTGTTTCAGCCATCCTCAGGGTCCCTTCTGCCC...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCAGGAGAGCCGGAATATaGGGAAGGTGTGTGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: LLSLEMYSDRESSSLRTSRRAGI*GRCVSW Trigger: CCATGACACACACCTTCCTCATATTCCGGCTCTCCT...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 72 bp | AGGGATGTTACATTCATGAGCCTTCAACATCTAAAGTaGCCTTCACAAGACCATACCAGGTCCTGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RDVTFMSLQHLK*PSQDHTRSCPQ Trigger: CTGCGGGCAGGACCTGGTATGGTCTTGTGAAGGCAACTTTAGATGTTGAAGGCTCATGAATGTAACATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | GTTCAGAAAGAGACAATCGAGGTAGACATTTCTGAAAGATCCTCAGCAGAGCAATCTGGAATGACCTTCTaGGAGCAGAAGGAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: VQKETIEVDISERSSAEQSGMTF*EQKESR Trigger: CCGGCTCTCCTTCTGCTCTCAGAAGGTCATTCCAGA...TTGCTCTGCTGAGGATCTTTCAGAAATGTCTACCTCGATTGTCTCTTTCTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCAGAAGAAGTCTGGAATaGCCTTCTGAGAGCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLSLEMYSDRESSSLRTSRRSLE*PSESRR Trigger: CCTTCTGCTCTCAGAAGGTCATTCCAGACTTCTTCT...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CCA 90 bp | GTTTGTAATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGCCTTACGCCTTCCTTaGGCAGAAGGGACCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VCNDNKIQGPRRVRTTVEALRLP*AEGTLR Trigger: CCTCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGC...TTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATTACAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | TCCCATAGAAACAGTTGTCTTGAATGCAATCTGTCACTGACTAAACCATCATTCCTGCTGTGGCTTCTCTaGCAGTCCCCAGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHRNSCLECNLSLTKPSFLLWLL*QSPEEE Trigger: TTCCTCCTCTGGGGACTGTCAGAGAAGCCACAGCAG...GAATGATGGTTTAGTCAGTGACAGATTGCATTCAAGACAACTGTTTCTATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | GTTTGTAATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAACTGCTGTGGCTTCTCTaGCAGTCCCCAGAGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VCNDNKIQGPRRVRTTVELLWLL*QSPEEE Trigger: TTCCTCCTCTGGGGACTGTCAGAGAAGCCACAGCAG...TTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATTACAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | GGAGGAACTCTTCAAAACAATGTTCTCTGGACATGGCAGGGATGTTACATTCATGATTCCCAGCTACTGTaGCCAGGTACATCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: GGTLQNNVLWTWQGCYIHDSQLL*PGTSTG Trigger: TCCTGTGGATGTACCTGGTCACAGTAGCTGGGAATC...ATGAATGTAACATCCCTGCCATGTCCAGAGAACATTGTTTTGAAGAGTTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | GATGTTACATTCATGAGCCTTCAACATCTAAAGTTGCCTTCACAAGACCATACCGCACTGTGGTGGAGGTaGAGAGGATGTCAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: DVTFMSLQHLKLPSQDHTALWWR*RGCQHR Trigger: CCTGTGTTGACATCCTCTTCACCTCCACCACAGTGC...GGTATGGTCTTGTGAAGGCAACTTTAGATGTTGAAGGCTCATGAATGTAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR GCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTTGTATACATGACAGCTaGTGCTGTGTCCTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLSLEMYSDRESSSLRTCIHDS*CCVLYH Trigger: GTGGTAGAGGACACAGCAGCAGCTGTCATGTATACA...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 72 bp | GACCATACCAGGTCCTGCCCGCAGTTTAAGAGCTGCTaGCATTCAGCTTCTTTTGATGAGGGAGAATCAATT | + |
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Preference number: 4 (lower is better) Translates to: DHTRSCPQFKSC*HSASFDEGESI Trigger: AATTGATTCTCCCTCATCAAAAGAAGCTGAATGCAAGCAGCTCTTAAACTGCGGGCAGGACCTGGTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | TCCCATAGAAACAGTTGTCTTGAATGCAATCTGTCACTGACTAAACCATCATTCTCTGGAATGACCTTCTaGGAGCAGAAGGAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SHRNSCLECNLSLTKPSFSGMTF*EQKESR Trigger: CCGGCTCTCCTTCTGCTCTCAGAAGGTCATTCCAGA...GAATGATGGTTTAGTCAGTGACAGATTGCATTCAAGACAACTGTTTCTATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | GTTCAGAAAGAGACAATCGAGGTAGACATTTCTGAAAGATCCTCAGCAGAGCAATCACCACTGTATACATaGCAGCTGCTGCTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VQKETIEVDISERSSAEQSPLYT*QLLLCP Trigger: AGGACACAGCAGCAGCTGTCATGTATACAGTGGTGA...TTGCTCTGCTGAGGATCTTTCAGAAATGTCTACCTCGATTGTCTCTTTCTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 72 bp | CACCTAGTCTTTTATCACCACCATCAGTGCTCTGTGTaGTGCATAACTACATGTGCTAGACTCTTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLVFYHHHQCSV*CITTCARLFGA Trigger: TGCCCCAAAGAGTCTAGCACATGTAGTTATGCACAACACAGAGCACTGATGGTGGTGATAAAAGACTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | TCCCATAGAAACAGTTGTCTTGAATGCAATCTGTCACTGACTAAACCATCATTCAGGAGAGCCGGAATATaGGGAAGGTGTGTGTCATGG | + |
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Preference number: 4 (lower is better) Translates to: SHRNSCLECNLSLTKPSFRRAGI*GRCVSW Trigger: CCATGACACACACCTTCCTCATATTCCGGCTCTCCT...GAATGATGGTTTAGTCAGTGACAGATTGCATTCAAGACAACTGTTTCTATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTATCACAGAAGAAGTCTaGAATGACCTTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLLSLEMYSDRESSSLRTITEEV*NDLLRA Trigger: TGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGAT...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | AAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTACAGACATAGATTCCCAGCTACTGTaGCCAGGTACATCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KTVRQYHHCKNFIECTDIDSQLL*PGTSTG Trigger: TCCTGTGGATGTACCTGGTCACAGTAGCTGGGAATC...TATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | CAGATTCTGAAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTAGAAGAAGTCTGGAATaGCCTTCTGAGAGCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: QILKTVRQYHHCKNFIECRRSLE*PSESRR Trigger: CCTTCTGCTCTCAGAAGGTCATTCCAGACTTCTTCT...ACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR TCA 90 bp | ACAATAGAAGAAGAGGACATAAATTTGAGAGTGGAATGTGGGGAATATTGGAGATCACCACTGTATACATaGCAGCTGCTGCTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TIEEEDINLRVECGEYWRSPLYT*QLLLCP Trigger: AGGACACAGCAGCAGCTGTCATGTATACAGTGGTGA...TCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR GCA 90 bp | GTTTGTAATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAAAGAGGATGTGTTGCTaGTGTGGCTTCTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: VCNDNKIQGPRRVRTTVEKRMCC*CGFSDS Trigger: ACTGTCAGAGAAGCCACAGCAGCAACACATCCTCTT...TTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATTACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CCA 90 bp | CAGATTCTGAAAACTGTCAGACAGTACCATCATTGCAAGAACTTCATAGAGTGTGAGATTGTCCTGCTTTaGGTGTGGATGTTCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: QILKTVRQYHHCKNFIECEIVLL*VWMFTR Trigger: CCTAGTGAACATCCACACCCAAAGCAGGACAATCTC...ACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CCA 90 bp | TCCCATAGAAACAGTTGTCTTGAATGCAATCTGTCACTGACTAAACCATCATTCGAGATTGTCCTGCTTTaGGTGTGGATGTTCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: SHRNSCLECNLSLTKPSFEIVLL*VWMFTR Trigger: CCTAGTGAACATCCACACCCAAAGCAGGACAATCTC...GAATGATGGTTTAGTCAGTGACAGATTGCATTCAAGACAACTGTTTCTATGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR GCA 90 bp | ACAATAGAAGAAGAGGACATAAATTTGAGAGTGGAATGTGGGGAATATTGGAGAAAGAGGATGTGTTGCTaGTGTGGCTTCTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: TIEEEDINLRVECGEYWRKRMCC*CGFSDS Trigger: ACTGTCAGAGAAGCCACAGCAGCAACACATCCTCTT...TCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR GCA 90 bp | ACAATAGAAGAAGAGGACATAAATTTGAGAGTGGAATGTGGGGAATATTGGAGATGTATACATGACAGCTaGTGCTGTGTCCTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: TIEEEDINLRVECGEYWRCIHDS*CCVLYH Trigger: GTGGTAGAGGACACAGCAGCAGCTGTCATGTATACA...TCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CCA 90 bp | TCCCATAGAAACAGTTGTCTTGAATGCAATCTGTCACTGACTAAACCATCATTCATCACAGAAGAAGTCTaGAATGACCTTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SHRNSCLECNLSLTKPSFITEEV*NDLLRA Trigger: TGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGAT...GAATGATGGTTTAGTCAGTGACAGATTGCATTCAAGACAACTGTTTCTATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| 3UTR CAA 72 bp | AGAACAGATTCTGAAAACTGTCAGACAGTACCATCATaGCAAGAACTTCATAGAGTGTACAGACATAAACAT | + |
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Preference number: 4 (lower is better) Translates to: RTDSENCQTVPS*QELHRVYRHKH Trigger: ATGTTTATGTCTGTACACTCTATGAAGTTCTTGCAATGATGGTACTGTCTGACAGTTTTCAGAATCTGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CAA 90 bp | AATGACAATAAAATACAAGGTCCCAGGAGAGTAAGAACCACTGTGGAAGAGAGGGGCCTTACGCCTTCCTaGGGCAGAAGGGACCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: NDNKIQGPRRVRTTVEERGLTPS*GRRDPE Trigger: CTCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGCC...CCTCTCTTCCACAGTGGTTCTTACTCTCCTGGGACCTTGTATTTTATTGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CAA 90 bp | CTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGCAGAAGCACAAGCTCATaGATCCGGGTTTCAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LLSLEMYSDRESSSLRTSRSTSS*IRVSEQ Trigger: TTGCTCTGAAACCCGGATCAATGAGCTTGTGCTTCT...GCTAGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CAA 90 bp | ACAATAGAAGAAGAGGACATAAATTTGAGAGTGGAATGTGGGGAATATTGGAGAGGCCTTACGCCTTCCTaGGGCAGAAGGGACCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TIEEEDINLRVECGEYWRGLTPS*GRRDPE Trigger: CTCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGCC...TCTCCAATATTCCCCACATTCCACTCTCAAATTTATGTCCTCTTCTTCTATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CAA 90 bp | TTCCTTTTATCACTTGAAATGTACAGTGACCGCGAATCCTCCTCCCTGAGGACTAGAAGCACAAGCTCATaGATCCGGGTTTCAGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: FLLSLEMYSDRESSSLRTRSTSS*IRVSEQ Trigger: TTGCTCTGAAACCCGGATCAATGAGCTTGTGCTTCT...AGTCCTCAGGGAGGAGGATTCGCGGTCACTGTACATTTCAAGTGATAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS-3UTR CAA 90 bp | GATGTTACATTCATGAGCCTTCAACATCTAAAGTTGCCTTCACAAGACCATACCCAGGAGAAGGAGACTTaGCCCTTGAGAATTCTGACC | + |
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Preference number: 5 (lower is better) Translates to: DVTFMSLQHLKLPSQDHTQEKET*PLRILT Trigger: GGTCAGAATTCTCAAGGGCAAAGTCTCCTTCTCCTG...GGTATGGTCTTGTGAAGGCAACTTTAGATGTTGAAGGCTCATGAATGTAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143976.4 ENSMUST00000214048.3 |
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| CDS TCA 72 bp | GGTCCCAGATCACAGAAGAAGTCTGGAATGACCTTCTaGGAGCAGAAGGAGAGCCGGAATATGAGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPRSQKKSGMTF*EQKESRNMRKV Trigger: CACCTTCCTCATATTCCGGCTCTCCTTCTGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGATCTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000143976.4 ENSMUST00000205790.2 ENSMUST00000206659.2 ENSMUST00000214048.3 |
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