Pregenerated sensors for OLFR584 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073959Ensembl transcript IDs: ENSMUST00000098210.5, ENSMUST00000214215.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTGGATACAGTGGTCAGGACCTGCTCACCTGGCTCTGTTGTTTTaGGCCAACTCATCATGGCAGGAGTGTCTGCTGGAGGCCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: KWIQWSGPAHLALLF*ANSSWQECLLEAWP Trigger: TGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACAACAGAGCCAGGTGAGCAGGTCCTGACCACTGTATCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 90 bp | TCATGGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTTaGGAGAAAAGAGACATAGTGAGCTGGGATCCACCATGCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SWQECLLEAWPFHAS*EKRDIVSWDPPCLL Trigger: GAGGAGGCATGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR GCA 90 bp | CAACTCATCATGGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATaGCAGTTGGGAGAAAAGAGACATAGTGAGCTGGGATCCACCATG | + |
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Preference number: 1 (lower is better) Translates to: QLIMAGVSAGGLAIS*QLGEKRHSELGSTM Trigger: CATGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR GCA 90 bp | ACCTGGCTCTGTTGTTTTGAGCCAACTCATCATGGCAGGAGTGTCTaGTGGAGGCCTGGCCATTTCATGCCAGTTGGGAGAAAAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: TWLCCFEPTHHGRSV*WRPGHFMPVGRKET Trigger: TGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACAACAGAGCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 90 bp | AACAAGTTACCTGAGACACAACTACAGAGGAAGAAAGTCCCAATTTaGCAAGTGGATACAGTGGTCAGGACCTGCTCACCTGGCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: NKLPETQLQRKKVPI*QVDTVVRTCSPGSV Trigger: AACAGAGCCAGGTGAGCAGGTCCTGACCACTGTATCCACTTGCCAAATTGGGACTTTCTTCCTCTGTAGTTGTGTCTCAGGTAACTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR TCA 90 bp | AGGGATGACTTTGTGATGTTAGGTAAAAAGCCTGTGAAGTGTTTCTaGCCTGTGGTGATGTCAGTGTGGGTAAATCAAGACAGGATATGC | + |
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Preference number: 1 (lower is better) Translates to: RDDFVMLGKKPVKCF*PVVMSVWVNQDRIC Trigger: GCATATCCTGTCTTGATTTACCCACACTGACATCACCACAGGTCAGAAACACTTCACAGGCTTTTTACCTAACATCACAAAGTCATCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 90 bp | CAAGTGGATACAGTGGTCAGGACCTGCTCACCTGGCTCTGTTGTTTaGAGCCAACTCATCATGGCAGGAGTGTCTGCTGGAGGCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: QVDTVVRTCSPGSVV*SQLIMAGVSAGGLA Trigger: GGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACAACAGAGCCAGGTGAGCAGGTCCTGACCACTGTATCCACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 90 bp | ATCATGGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTaGGGAGAAAAGAGACATAGTGAGCTGGGATCCACCATGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: IMAGVSAGGLAISCQ*GEKRHSELGSTMPP Trigger: AGGAGGCATGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTTGGGAGAAAAGAGTATGCCAATGCCAAGTaGTCTATTTCACTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRSVCWRPGHFMPVGRKEYANAK*SISLLS Trigger: ACTGAGGAGTGAAATAGAGCACTTGGCATTGGCATA...CTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 90 bp | TCCACCATGCCTCCTCAAATCACCTCAGTAATAGAGCATTCTTCTTaGGGTCCCATCAGCTTCCATTGCCTTCCTGTACTACCAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: STMPPQITSVIEHSS*GPISFHCLPVLPKP Trigger: AGGCTTTGGTAGTACAGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGCTCTATTACTGAGGTGATTTGAGGAGGCATGGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTATGCCAATGCCAAGTGCTCTATTTCACTCCTCAGTTAATAGTATGGAGCCTGTGAAGTGTTTCTaGCCTGTGGTGATGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: MSMPMPSALFHSSVNSMEPVKCF*PVVMSV Trigger: CACTGACATCACCACAGGTCAGAAACACTTCACAGG...CTCCATACTATTAACTGAGGAGTGAAATAGAGCACTTGGCATTGGCATAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCACTCCTCAGTAGCTCTCAGATCTCTTaGTATGGATACCATGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: TLMLHVYANAKCSISLLSSSQIS*YGYHEV Trigger: AACTTCATGGTATCCATATCAAGAGATCTGAGAGCT...ACTGAGGAGTGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTAGAACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCAGATTCCCTGTTGCTATaGTTCTTGTCACATGCCATG | + |
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Preference number: 2 (lower is better) Translates to: FSRTLMLHVYANAKCSISDSLLL*FLSHAM Trigger: CATGGCATGTGACAAGAATCATAGCAACAGGGAATC...TGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGTTCTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTAGAACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCAGAAGTCTCCAGAGTTTaGAGTCAACAACAGATTAAG | + |
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Preference number: 2 (lower is better) Translates to: FSRTLMLHVYANAKCSISEVSRV*SQQQIK Trigger: CTTAATCTGTTGTTGACTTCAAACTCTGGAGACTTC...TGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGTTCTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 90 bp | TTACTACAAATAAAACAGCACCTGGTGTCCAATCACATTTCGTCATaGGTTTCATTTATTTTCTTCTCAGCTTCCTTCCCACTTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: LLQIKQHLVSNHISS*VSFIFFSASFPLSF Trigger: AAATGAAAGTGGGAAGGAAGCTGAGAAGAAAATAAATGAAACCAATGACGAAATGTGATTGGACACCAGGTGCTGTTTTATTTGTAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAGAACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCACCTCAGTTAATAGTATaGAGAATGATGGGAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: FSRTLMLHVYANAKCSISPQLIV*RMMGTK Trigger: TTTAGTTCCCATCATTCTCCATACTATTAACTGAGG...TGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGTTCTAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR TCA 72 bp | CAGTGGTCAGGACCTGCTCACCTGGCTCTGTTGTTTTaGGCCAACTCATCATGGCAGGAGTGTCTGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: QWSGPAHLALLF*ANSSWQECLLE Trigger: CTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACAACAGAGCCAGGTGAGCAGGTCCTGACCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR GCA 72 bp | ATGGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATaGCAGTTGGGAGAAAAGAGACATAGTGAGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MAGVSAGGLAIS*QLGEKRHSELG Trigger: TCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 72 bp | GAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTTaGGAGAAAAGAGACATAGTGAGCTGGGATCCACCA | + |
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Preference number: 3 (lower is better) Translates to: ECLLEAWPFHAS*EKRDIVSWDPP Trigger: TGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR GCA 72 bp | TGTTGTTTTGAGCCAACTCATCATGGCAGGAGTGTCTaGTGGAGGCCTGGCCATTTCATGCCAGTTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CCFEPTHHGRSV*WRPGHFMPVGR Trigger: TCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 72 bp | GCCAACTCATCATGGCAGGAGTGTCTGCTGGAGGCCTaGCCATTTCATGCCAGTTGGGAGAAAAGAGACATA | + |
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Preference number: 3 (lower is better) Translates to: ANSSWQECLLEA*PFHASWEKRDI Trigger: TATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 72 bp | TGTTTTGAGCCAACTCATCATGGCAGGAGTGTCTGCTaGAGGCCTGGCCATTTCATGCCAGTTGGGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: CFEPTHHGRSVC*RPGHFMPVGRK Trigger: TTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCCATGATGAGTTGGCTCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CCA 72 bp | CCTGAGACACAACTACAGAGGAAGAAAGTCCCAATTTaGCAAGTGGATACAGTGGTCAGGACCTGCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: PETQLQRKKVPI*QVDTVVRTCSP Trigger: AGGTGAGCAGGTCCTGACCACTGTATCCACTTGCCAAATTGGGACTTTCTTCCTCTGTAGTTGTGTCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR GCA 72 bp | ATAGAGCATTCTTCTTTGGGTCCCATCAGCTTCCATTaGCTTCCTGTACTACCAAAGCCTTATACTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: IEHSSLGPISFH*LPVLPKPYTKC Trigger: ACACTTAGTATAAGGCTTTGGTAGTACAGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR TCA 72 bp | TTTGTGATGTTAGGTAAAAAGCCTGTGAAGTGTTTCTaGCCTGTGGTGATGTCAGTGTGGGTAAATCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: FVMLGKKPVKCF*PVVMSVWVNQD Trigger: GTCTTGATTTACCCACACTGACATCACCACAGGTCAGAAACACTTCACAGGCTTTTTACCTAACATCACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 72 bp | GGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTaGGGAGAAAAGAGACATAGTGAGCTGGGATCCACC | + |
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Preference number: 4 (lower is better) Translates to: GVSAGGLAISCQ*GEKRHSELGST Trigger: GGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | CTTCTTTGGGTCCCATCAGCTTCCATTGCCTTCCTGTACTACCAAAGCCTTATAATGTACCAAAAGCCTTaGGGCGAGCTTCACCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLWVPSASIAFLYYQSLIMYQKP*GELHLR Trigger: CCTCAGGTGAAGCTCGCCTCAAGGCTTTTGGTACAT...TATAAGGCTTTGGTAGTACAGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | CTTCTTTGGGTCCCATCAGCTTCCATTGCCTTCCTGTACTACCAAAGCCTTATATTGGCAAACATGATGTaGACAACTCGGGGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: LLWVPSASIAFLYYQSLILANMM*TTRGTW Trigger: CCATGTGCCCCGAGTTGTTCACATCATGTTTGCCAA...TATAAGGCTTTGGTAGTACAGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | GCCTGTGAAGTGTTTCTGACCTGTGGTGATGTCAGTGTGGGTAAATCAAGACAGCTGCCACAATATACATaGCACAGAATGGAAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ACEVFLTCGDVSVGKSRQLPQYT*HRMERQ Trigger: TTGCCTTTCCATTCTGTGTCATGTATATTGTGGCAG...CTGTCTTGATTTACCCACACTGACATCACCACAGGTCAGAAACACTTCACAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| 3UTR CAA 72 bp | CCTCCTCAAATCACCTCAGTAATAGAGCATTCTTCTTaGGGTCCCATCAGCTTCCATTGCCTTCCTGTACTA | + |
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Preference number: 4 (lower is better) Translates to: PPQITSVIEHSS*GPISFHCLPVL Trigger: TAGTACAGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGCTCTATTACTGAGGTGATTTGAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | ACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCACTCCTCAGTAGACATTGGCAAACATaGTGTGAACAACTCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLMLHVYANAKCSISLLSRHWQT*CEQLGA Trigger: TGCCCCGAGTTGTTCACATCATGTTTGCCAATGTCT...ACTGAGGAGTGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR GCA 90 bp | GCCTGTGAAGTGTTTCTGACCTGTGGTGATGTCAGTGTGGGTAAATCAAGACAGGATGTTTCCAGTCACTaGCACAATATACATGACACA | + |
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Preference number: 4 (lower is better) Translates to: ACEVFLTCGDVSVGKSRQDVSSH*HNIHDT Trigger: TGTGTCATGTATATTGTGGCAGTGACTGGAAACATC...CTGTCTTGATTTACCCACACTGACATCACCACAGGTCAGAAACACTTCACAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | TCTCTCCTCAGTCTTCCCTTTCTTCCATTTCCCCTTCCTTTCCTTCTTCTCACTTCAATTCGGATTATGTaGAGGATGGTGATGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLLSLPFLPFPLPFLLLTSIRIM*RMVMFP Trigger: TGGAAACATCACCATCCTTCACATAATCCGAATTGA...AGTGAGAAGAAGGAAAGGAAGGGGAAATGGAAGAAAGGGAAGACTGAGGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR TCA 90 bp | TTTTCTAGAACTCTCATGTTACATGTCTATGCCAATGCCAAGTGCTCTATTTCATTATGTGAAGGATGGTaGTGTTTCCAGTCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSRTLMLHVYANAKCSISLCEGW*CFQSLP Trigger: TGGCAGTGACTGGAAACATCACCATCCTTCACATAA...TGAAATAGAGCACTTGGCATTGGCATAGACATGTAACATGAGAGTTCTAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTTGGGAGAAAAGAGTGGGGAATGATCTTGTaGGGGCAGAAGGGCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: GRSVCWRPGHFMPVGRKEWGMIL*GQKGIL Trigger: CAGGATGCCCTTCTGCCCCAACAAGATCATTCCCCA...CTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR CAA 90 bp | GTCAGGACCTGCTCACCTGGCTCTGTTGTTTTGAGCCAACTCATCATGGCAGGAAGTATAGCCAGCATTTaGGGTTGTGTGGAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VRTCSPGSVVLSQLIMAGSIASI*GCVEED Trigger: GTCCTCCTCCACACAACCCAAAATGCTGGCTATACT...TCCTGCCATGATGAGTTGGCTCAAAACAACAGAGCCAGGTGAGCAGGTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGTGTCTGCTGGAGGCCTGGCCATTTCATGCCAGTTGGGAGAAAAGAGCCATATATGATGGGATaGAGCATAGGAGGAACTAGA | + |
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Preference number: 5 (lower is better) Translates to: GRSVCWRPGHFMPVGRKEPYMMG*SIGGTR Trigger: TCTAGTTCCTCCTATGCTCAATCCCATCATATATGG...CTCTTTTCTCCCAACTGGCATGAAATGGCCAGGCCTCCAGCAGACACTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCCTCAGTCTTCCCTTTCTTCCATTTCCCCTTCCTTTCCTTCTTCTCACTGACTGGGGAATGATCTaGTTGGGGCAGAAGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: SLLSLPFLPFPLPFLLLTDWGMI*LGQKGI Trigger: GATGCCCTTCTGCCCCAACAAGATCATTCCCCAGTC...AGTGAGAAGAAGGAAAGGAAGGGGAAATGGAAGAAAGGGAAGACTGAGGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214215.2 |
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| CDS CCA 90 bp | GACACAGAATGGAAAGGCAACCCAGAATTGGTAATTCTCCAGTCCTaGGATTCCAAGCAAGATGAAAAATGTAGAGTGGGAAGAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: DTEWKGNPELVILQS*DSKQDEKCRVGRAV Trigger: AACAGCTCTTCCCACTCTACATTTTTCATCTTGCTTGGAATCCCAGGACTGGAGAATTACCAATTCTGGGTTGCCTTTCCATTCTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098210.5 ENSMUST00000214215.2 |
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| CDS CAA 90 bp | GGGCTCACCCACAGCAGCCCTCTCACCATCACAACAGCACCTAGTTaGATGACTGCAGATGTGGTGAGGATGCTGGAATGTCGGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLTHSSPLTITTAPS*MTADVVRMLECRSG Trigger: CCCACTCCGACATTCCAGCATCCTCACCACATCTGCAGTCATCAAACTAGGTGCTGTTGTGATGGTGAGAGGGCTGCTGTGGGTGAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098210.5 ENSMUST00000214215.2 |
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| CDS CAA 72 bp | ACAACAGAGAAAGCCACAAAGAGTCCATATCCACGATaGACTCTGGTATCAGCACATACCAACTTAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TTEKATKSPYPR*TLVSAHTNLST Trigger: TGTGCTTAAGTTGGTATGTGCTGATACCAGAGTCAATCGTGGATATGGACTCTTTGTGGCTTTCTCTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098210.5 ENSMUST00000214215.2 |
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