Pregenerated sensors for OLFR582 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073961Ensembl transcript IDs: ENSMUST00000098212.2, ENSMUST00000210119.3, ENSMUST00000211036.3, ENSMUST00000214021.3
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTCTCAAATTCACAGTGCTCCCGCCTCGGATTCCCTGTTGCTGTaGTTCTTGTCACGTGCCATGACACTCACTTCCTATAGGATGACA | + |
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Preference number: 1 (lower is better) Translates to: WSQIHSAPASDSLLL*FLSRAMTLTSYRMT Trigger: TGTCATCCTATAGGAAGTGAGTGTCATGGCACGTGACAAGAATCACAGCAACAGGGAATCCGAGGCGGGAGCACTGTGAATTTGAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR GCA 90 bp | CCACTTGTATTTTCTTCTCTCCTTCTCATTATTCCTTTCTTCCATTaGCCCTCCTTTTATTCTCTCCCTCCCTCTAACCTTCCTATCTAC | + |
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Preference number: 1 (lower is better) Translates to: PLVFSSLLLIIPFFH*PSFYSLPPSNLPIY Trigger: GTAGATAGGAAGGTTAGAGGGAGGGAGAGAATAAAAGGAGGGGCAATGGAAGAAAGGAATAATGAGAAGGAGAGAAGAAAATACAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR CAA 90 bp | TTTCGTCATTGGTTTCATTTATTTTCTCCTCTTCCTCCTTCCCACTaGTATTTTCTTCTCTCCTTCTCATTATTCCTTTCTTCCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: FRHWFHLFSPLPPSH*YFLLSFSLFLSSIA Trigger: GGCAATGGAAGAAAGGAATAATGAGAAGGAGAGAAGAAAATACAAGTGGGAAGGAGGAAGAGGAGAAAATAAATGAAACCAATGACGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR GCA 72 bp | GCTCTCTTGCTTTTAGCCAACTCATCATGGCTGGTCTaGTGGAGGTCTGGTCATCTCGTGTCAGTTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: ALLLLANSSWLV*WRSGHLVSVGR Trigger: TCTCCCAACTGACACGAGATGACCAGACCTCCAGCAGACCAGCCATGATGAGTTGGCTAAAAGCAAGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR TCA 72 bp | ATTCACAGTGCTCCCGCCTCGGATTCCCTGTTGCTGTaGTTCTTGTCACGTGCCATGACACTCACTTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: IHSAPASDSLLL*FLSRAMTLTSY Trigger: ATAGGAAGTGAGTGTCATGGCACGTGACAAGAATCACAGCAACAGGGAATCCGAGGCGGGAGCACTGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR CCA 72 bp | GGGATCCACCATGCCTCCTCAAATGTCACACCTCAGTaGCATAACATTCTTCTTTGGGTCCCATCAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GIHHASSNVTPQ*HNILLWVPSAS Trigger: GGAAGCTGATGGGACCCAAAGAAGAATGTTATGCCACTGAGGTGTGACATTTGAGGAGGCATGGTGGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR CCA 72 bp | TCTCGTGTCAGTTGGGAGAAAAGAGACATAGTGAGCTaGGATCCACCATGCCTCCTCAAATGTCACACCTCA | + |
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Preference number: 3 (lower is better) Translates to: SRVSWEKRDIVS*DPPCLLKCHTS Trigger: TGAGGTGTGACATTTGAGGAGGCATGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGACACGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR CCA 72 bp | TTTAGCCAACTCATCATGGCTGGTCTGCTGGAGGTCTaGTCATCTCGTGTCAGTTGGGAGAAAAGAGACATA | + |
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Preference number: 3 (lower is better) Translates to: FSQLIMAGLLEV*SSRVSWEKRDI Trigger: TATGTCTCTTTTCTCCCAACTGACACGAGATGACCAGACCTCCAGCAGACCAGCCATGATGAGTTGGCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGTTGGGAGAAAAGAGACATAGTGAGCTGGGATCCACCATGCCTCCTCAATTGACCAATCTCCATTaGAACAAAGAACTGCAGATT | + |
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Preference number: 3 (lower is better) Translates to: CQLGEKRHSELGSTMPPQLTNLH*NKELQI Trigger: AATCTGCAGTTCTTTGTTCAAATGGAGATTGGTCAA...TTGAGGAGGCATGGTGGATCCCAGCTCACTATGTCTCTTTTCTCCCAACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| 3UTR CAA 72 bp | GGCATAACATTCTTCTTTGGGTCCCATCAGCTTCCATaGCCTTCCAGTAGTGCCAAAGCCTTATACCAAATG | + |
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Preference number: 4 (lower is better) Translates to: GITFFFGSHQLP*PSSSAKALYQM Trigger: CATTTGGTATAAGGCTTTGGCACTACTGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGTTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | CCTCAAATGTCACACCTCAGTGGCATAACATTCTTCTTTGGGTCCCATCAGCTTGTAATTCTCCAGTCCTaGGATTCCAAGCAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PQMSHLSGITFFFGSHQLVILQS*DSKQDE Trigger: TTCATCTTGCTTGGAATCCCAGGACTGGAGAATTAC...AAGCTGATGGGACCCAAAGAAGAATGTTATGCCACTGAGGTGTGACATTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGGTATGGCCAGCATTTTaGGTTGTGTGGAGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVVWPAF*VVWRRT Trigger: TGTCCTCCTCCACACAACCCAAAATGCTGGCCATAC...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR TCA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTGGCAAACATGATGTaGACAATTCGGGGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVLANMM*TIRGTW Trigger: CCATGTGCCCCGAATTGTTCACATCATGTTTGCCAA...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTATGGCCAGCATTTTaGGTTGTGTGGAGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSVWPAF*VVWRRT Trigger: TGTCCTCCTCCACACAACCCAAAATGCTGGCCATAC...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR TCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTTTGGCAAACATGATGTaGACAATTCGGGGCACATGG | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSLANMM*TIRGTW Trigger: CCATGTGCCCCGAATTGTTCACATCATGTTTGCCAA...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTCCAGAAAGAGATACATaGGCTCATGTAGGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSPERDT*AHVGCG Trigger: ACCACACCCTACATGAGCCCATGTATCTCTTTCTGG...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGCATGAAACCAGAGTATaGCCAGCATTTTGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVHETRV*PAFWVV Trigger: CACAACCCAAAATGCTGGCCATACTCTGGTTTCATG...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGGTAATTCTCCAGTCCTaGGATTCCAAGCAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVVILQS*DSKQDE Trigger: TTCATCTTGCTTGGAATCCCAGGACTGGAGAATTAC...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGCCAGAAAGAGATACATaGGCTCATGTAGGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMPERDT*AHVGCG Trigger: ACCACACCCTACATGAGCCCATGTATCTCTTTCTGG...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR GCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTACTCTGTCTCTGATCTaGTTGGTTCTAACTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSTLSLI*LVLTPY Trigger: ATATGGAGTTAGAACCAAGCAGATCAGAGACAGAGT...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGGTAATTCTCCAGTCCTaGGATTCCAAGCAAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMVILQS*DSKQDE Trigger: TTCATCTTGCTTGGAATCCCAGGACTGGAGAATTAC...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTTTTCCACAAAATGCTTaGGTAACTCTGTCTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSFPQNA*VTLSLI Trigger: GATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAA...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR GCA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTAGCTCTCAGAATCATTaGATAAGATACACTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSSSQNH*IRYTDD Trigger: GTCATCAGTGTATCTTATGCAATGATTCTGAGAGCT...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR GCA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGACTCTGTCTCTGATCTaGTTGGTTCTAACTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMTLSLI*LVLTPY Trigger: ATATGGAGTTAGAACCAAGCAGATCAGAGACAGAGT...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CCA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGTTTCCACAAAATGCTTaGGTAACTCTGTCTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMFPQNA*VTLSLI Trigger: GATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAA...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR GCA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGAGCTCTCAGAATCATTaGATAAGATACACTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMSSQNH*IRYTDD Trigger: GTCATCAGTGTATCTTATGCAATGATTCTGAGAGCT...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAATGTCACACCTCAGTGGCATAACATTCTTCTTTGGGTCCCATCAGCTTAGTATGGCCAGCATTTaGGGTTGTGTGGAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: PQMSHLSGITFFFGSHQLSMASI*GCVEED Trigger: GTCCTCCTCCACACAACCCAAAATGCTGGCCATACT...AAGCTGATGGGACCCAAAGAAGAATGTTATGCCACTGAGGTGTGACATTTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| CDS TCA 90 bp | AATATGAGAAGCACATGTACCAAAAGCCTTGAGGCGAGCTTCACCTaGGGGCAACCTCAGCACAGCTCTCAGAATCATTGCATAAGATAC | + |
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Preference number: 5 (lower is better) Translates to: NMRSTCTKSLEASFT*GQPQHSSQNHCIRY Trigger: GTATCTTATGCAATGATTCTGAGAGCTGTGCTGAGGTTGCCCTCAGGTGAAGCTCGCCTCAAGGCTTTTGGTACATGTGCTTCTCATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098212.2 ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGAGTATGGCCAGCATTTaGGGTTGTGTGGAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVSMASI*GCVEED Trigger: GTCCTCCTCCACACAACCCAAAATGCTGGCCATACT...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | ATAACATTCTTCTTTGGGTCCCATCAGCTTCCATTGCCTTCCAGTAGTGCCAAAACAGCTACCCCTAGTTaGATGACTACAGATGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: ITFFFGSHQLPLPSSSAKTATPS*MTTDVV Trigger: GACCACATCTGTAGTCATCAAACTAGGGGTAGCTGT...TTTGGCACTACTGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGACAGCTACCCCTAGTTaGATGACTACAGATGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVTATPS*MTTDVV Trigger: GACCACATCTGTAGTCATCAAACTAGGGGTAGCTGT...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | GACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTAATGCATGTACCAAAAGCCTaGAGGCGAGCTTCACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DLVMLRNKPVKCFSSVLMHVPKA*RRASPE Trigger: CTCAGGTGAAGCTCGCCTCAAGGCTTTTGGTACATG...CATTAACACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | ATAACATTCTTCTTTGGGTCCCATCAGCTTCCATTGCCTTCCAGTAGTGCCAAATTTTCCACAAAATGCTaGGGTAACTCTGTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: ITFFFGSHQLPLPSSSAKFSTKC*GNSVSD Trigger: ATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAAA...TTTGGCACTACTGGAAGGCAATGGAAGCTGATGGGACCCAAAGAAGAATGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | AGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTGTGTTTTCCACAAAATGCTaGGGTAACTCTGTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: RDDLVMLRNKPVKCFSSVFSTKC*GNSVSD Trigger: ATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAAA...CACAGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS-3UTR CAA 90 bp | AACAGGGATGACCTTGTGATGTTACGTAATAAACCTGTGAAGTGTTTCTCATCTTTTTCCACAAAATGCTaGGGTAACTCTGTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: NRDDLVMLRNKPVKCFSSFSTKC*GNSVSD Trigger: ATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAAA...AGATGAGAAACACTTCACAGGTTTATTACGTAACATCACAAGGTCATCCCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS CAA 90 bp | GGGCTCACCCACAGCAGCCCTCTCACCATCACAGCTACCCCTAGTTaGATGACTACAGATGTGGTCAGGATGCTGGAATGTCTGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLTHSSPLTITATPS*MTTDVVRMLECLSG Trigger: CCCACTCAGACATTCCAGCATCCTGACCACATCTGTAGTCATCAAACTAGGGGTAGCTGTGATGGTGAGAGGGCTGCTGTGGGTGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098212.2 ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS CAA 72 bp | CACAGCAGCCCTCTCACCATCACAGCTACCCCTAGTTaGATGACTACAGATGTGGTCAGGATGCTGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: HSSPLTITATPS*MTTDVVRMLEC Trigger: ACATTCCAGCATCCTGACCACATCTGTAGTCATCAAACTAGGGGTAGCTGTGATGGTGAGAGGGCTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098212.2 ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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| CDS CAA 72 bp | GCCACAGAGAAAGCCACAAAGAGTCCATATCCACGATaGACTCTGGTATCAGCACATACCAACTTAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ATEKATKSPYPR*TLVSAHTNLST Trigger: TGTGCTTAAGTTGGTATGTGCTGATACCAGAGTCAATCGTGGATATGGACTCTTTGTGGCTTTCTCTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098212.2 ENSMUST00000210119.3 ENSMUST00000211036.3 ENSMUST00000214021.3 |
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