Pregenerated sensors for OLFR58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058659Ensembl transcript IDs: ENSMUST00000215112.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAATTTATCCCCAACAATTCTCCCTCCATACTTCATTACATGTTCTCCACCCACCTATAGCTGGAAAATaGTATCAATGGCCTCATAGT | + |
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Preference number: 2 (lower is better) Translates to: PIYPQQFSLHTSLHVLHPPIAGK*YQWPHS Trigger: ACTATGAGGCCATTGATAGCATTTTCCAGCTATAGG...TGGGTGGAGAACATGTAATGAAGTATGGAGGGAGAATTGTTGGGGATAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR CCA 72 bp | TTTAGTGCAATCCCTATAGCTGGAAAATGCTATCAATaGCCTCATAGTGAAAGTGGAGTATTTCTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FSAIPIAGKCYQ*PHSESGVFLPS Trigger: GGAAGGGAGAAATACTCCACTTTCACTATGAGGCCATTGATAGCATTTTCCAGCTATAGGGATTGCACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR GCA 72 bp | GTCCTCAAATTTAGTGCAATCCCTATAGCTGGAAAATaGTATCAATGGCCTCATAGTGAAAGTGGAGTATTT | + |
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Preference number: 3 (lower is better) Translates to: VLKFSAIPIAGK*YQWPHSESGVF Trigger: AAATACTCCACTTTCACTATGAGGCCATTGATAGCATTTTCCAGCTATAGGGATTGCACTAAATTTGAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACAGAAACTACATGTAAGTaGGACAAGTGCATCAAGATA | + |
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Preference number: 3 (lower is better) Translates to: GKVGMIVKFRESCSKFLTETTCK*DKCIKI Trigger: TATCTTGATGCACTTGTCCAACTTACATGTAGTTTC...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR CCA 72 bp | CAAAACAGTGATACCCAAACCAAGTTATACTATTTCTaGATGCATTCTTTGGCGTGTAAAAACATGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: QNSDTQTKLYYF*MHSLACKNMCS Trigger: ACTGCACATGTTTTTACACGCCAAAGAATGCATCCAGAAATAGTATAACTTGGTTTGGGTATCACTGTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR CCA 72 bp | CCCAAACCAAGTTATACTATTTCTGGATGCATTCTTTaGCGTGTAAAAACATGTGCAGTGCCAATTTATAAT | + |
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Preference number: 3 (lower is better) Translates to: PKPSYTISGCIL*RVKTCAVPIYN Trigger: ATTATAAATTGGCACTGCACATGTTTTTACACGCCAAAGAATGCATCCAGAAATAGTATAACTTGGTTTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | CCCAAACCAAGTTATACTATTTCTGGATGCATTCTTTGGCGTGTAAAAACATGTTCCAGAGGGCTTTCTTaGTGTCCCTGTTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PKPSYTISGCILWRVKTCSRGLS*CPCSSG Trigger: GCCTGAGGAACAGGGACATCAAGAAAGCCCTCTGGA...ACATGTTTTTACACGCCAAAGAATGCATCCAGAAATAGTATAACTTGGTTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | GAAAATGCTATCAATGGCCTCATAGTGAAAGTGGAGTATTTCTCCCTTCCCAAGGACAAGGATTCAGAATaGCTTGGTAGTGTAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: ENAINGLIVKVEYFSLPKDKDSE*LGSVEG Trigger: ACCCTCTACACTACCAAGTCATTCTGAATCCTTGTC...CTTGGGAAGGGAGAAATACTCCACTTTCACTATGAGGCCATTGATAGCATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | CAATTTATCCCCAACAATTCTCCCTCCATACTTCATTACATGTTCTCCACCCAAGCCCATGTCAGACAATaGAAGGTTGTAGAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QFIPNNSPSILHYMFSTQAHVRQ*KVVEEE Trigger: TTCTTCCTCTACAACCTTTCATTGTCTGACATGGGC...TTGGGTGGAGAACATGTAATGAAGTATGGAGGGAGAATTGTTGGGGATAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | CCAATTTATCCCCAACAATTCTCCCTCCATACTTCATTACATGTTCTCCACCCAAGAGTCCAAGGAGAATaGATTCCAAGGTTCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: PIYPQQFSLHTSLHVLHPRVQGE*IPRFLL Trigger: TAACAGGAACCTTGGAATTCATTCTCCTTGGACTCT...TGGGTGGAGAACATGTAATGAAGTATGGAGGGAGAATTGTTGGGGATAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | GAAAATGCTATCAATGGCCTCATAGTGAAAGTGGAGTATTTCTCCCTTCCCAAGGGAGGAATCCAACAATaGTGCTTGAAAGAAACATGG | + |
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Preference number: 4 (lower is better) Translates to: ENAINGLIVKVEYFSLPKGGIQQ*CLKETW Trigger: CCATGTTTCTTTCAAGCATCATTGTTGGATTCCTCC...CTTGGGAAGGGAGAAATACTCCACTTTCACTATGAGGCCATTGATAGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACAATAGTGCAAATAAGATaGGCTGCAGTTCAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GKVGMIVKFRESCSKFLTIVQIR*AAVQGP Trigger: AGGACCCTGAACTGCAGCTCATCTTATTTGCACTAT...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR TCA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACACAGAAACTGTGGAACTaGGGTAAACTCCTATACCTG | + |
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Preference number: 4 (lower is better) Translates to: GKVGMIVKFRESCSKFLTQKLWN*GKLLYL Trigger: CAGGTATAGGAGTTTACCTCAGTTCCACAGTTTCTG...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR CCA 90 bp | CCCAAACCAAGTTATACTATTTCTGGATGCATTCTTTGGCGTGTAAAAACATGTCTACCATACTTTCCCTaGAAGAACCAGAAACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PKPSYTISGCILWRVKTCLPYFP*KNQKLW Trigger: CCACAGTTTCTGGTTCTTCCAGGGAAAGTATGGTAG...ACATGTTTTTACACGCCAAAGAATGCATCCAGAAATAGTATAACTTGGTTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR CCA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACAATTCAGCATATGTTGTaGATCTCTTATGTGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: GKVGMIVKFRESCSKFLTIQHML*ISYVHA Trigger: TGCATGCACATAAGAGATCCACAACATATGCTGAAT...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR CAA 72 bp | ATTCCGACATCAGGACATAGTGAAACTACATGTAAGTaGGACAAGTGCATCAAGATAGACCTGGATTTATTA | + |
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Preference number: 4 (lower is better) Translates to: IPTSGHSETTCK*DKCIKIDLDLL Trigger: TAATAAATCCAGGTCTATCTTGATGCACTTGTCCAACTTACATGTAGTTTCACTATGTCCTGATGTCGGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR GCA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACAGATCTCTTATGTGCATaGAAGTTTATCAGCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: GKVGMIVKFRESCSKFLTDLLCA*KFISIL Trigger: CAAAATGCTGATAAACTTGCATGCACATAAGAGATC...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| 3UTR CAA 72 bp | CTTCATTACATGTTCTCCACCCAATTTCACATCTTCTaGTCACATAATCCATTGAATCAAATTGCTGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LHYMFSTQFHIF*SHNPLNQIAVV Trigger: TACAACAGCAATTTGATTCAATGGATTATGTGACAAGAAGATGTGAAATTGGGTGGAGAACATGTAATGAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR CAA 90 bp | GGGAAAGTGGGAATGATAGTAAAGTTTAGGGAGTCATGTTCAAAGTTCCTAACATTCCAGAGGGCTTTCTaGATGTCCCTGTTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GKVGMIVKFRESCSKFLTFQRAF*MSLFLR Trigger: CCTGAGGAACAGGGACATCAAGAAAGCCCTCTGGAA...TGTTAGGAACTTTGAACATGACTCCCTAAACTTTACTATCATTCCCACTTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS-3UTR CAA 90 bp | GAAAATGCTATCAATGGCCTCATAGTGAAAGTGGAGTATTTCTCCCTTCCCAAGAAGTTTATCAGCATTTaGGGGATTGTGGTGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: ENAINGLIVKVEYFSLPKKFISI*GIVVLL Trigger: TAGCAGCACCACAATCCCCAAAATGCTGATAAACTT...CTTGGGAAGGGAGAAATACTCCACTTTCACTATGAGGCCATTGATAGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS CAA 90 bp | GCATATGTTGTGGATCTCTTATGTGCATGCAAGTTTATCAGCATTTaGGGGATTGTGGTGCTGCTAAAGCCCATGTCAGACAATGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: AYVVDLLCACKFISI*GIVVLLKPMSDNER Trigger: CCTTTCATTGTCTGACATGGGCTTTAGCAGCACCACAATCCCCAAAATGCTGATAAACTTGCATGCACATAAGAGATCCACAACATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS CAA 90 bp | GGGAGGAATCCAACAATGATGCTTGAAAGAAACATGGCTATGTCATaGATAGTAGTGTTAGAACAAGCAAGTTTTACAAGTTCTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: GRNPTMMLERNMAMS*IVVLEQASFTSSGT Trigger: TGTTCCAGAACTTGTAAAACTTGCTTGTTCTAACACTACTATCAATGACATAGCCATGTTTCTTTCAAGCATCATTGTTGGATTCCTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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| CDS CAA 72 bp | CCAACAATGATGCTTGAAAGAAACATGGCTATGTCATaGATAGTAGTGTTAGAACAAGCAAGTTTTACAAGT | + |
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Preference number: 6 (lower is better) Translates to: PTMMLERNMAMS*IVVLEQASFTS Trigger: ACTTGTAAAACTTGCTTGTTCTAACACTACTATCAATGACATAGCCATGTTTCTTTCAAGCATCATTGTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215112.3 |
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