Pregenerated sensors for OLFR578 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045792Ensembl transcript IDs: ENSMUST00000056235.2, ENSMUST00000215606.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGGCTTGATGCGTCAGCTAGGGGGATGCTTAGAGTTTTGATGTaGGAGTGGGTGAGTGGGTGGAGGAACTCCCTCATTGAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: WRLDASARGMLRVLM*EWVSGWRNSLIEAK Trigger: CTTTGCCTCAATGAGGGAGTTCCTCCACCCACTCACCCACTCCCACATCAAAACTCTAAGCATCCCCCTAGCTGACGCATCAAGCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 90 bp | CTTGATGCGTCAGCTAGGGGGATGCTTAGAGTTTTGATGTGGGAGTaGGTGAGTGGGTGGAGGAACTCCCTCATTGAGGCAAAGGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LDASARGMLRVLMWE*VSGWRNSLIEAKER Trigger: TCTCTCCTTTGCCTCAATGAGGGAGTTCCTCCACCCACTCACCCACTCCCACATCAAAACTCTAAGCATCCCCCTAGCTGACGCATCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 90 bp | CACTGTGTGAGAACACAGGATGGGAGAATGAGGATGGTATTCTTATaGACATGCAGCCCAAATTACAGGGCCTTTACTGGAGCTGATAGT | + |
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Preference number: 1 (lower is better) Translates to: HCVRTQDGRMRMVFL*TCSPNYRAFTGADS Trigger: ACTATCAGCTCCAGTAAAGGCCCTGTAATTTGGGCTGCATGTTCATAAGAATACCATCCTCATTCTCCCATCCTGTGTTCTCACACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 90 bp | GTATCCATGGCTCCAGATACATATATAGCAGCATATAGCCTTATCTaGCATCAATGGGAGAGGAGGCCCTTGGATCTATGGAGGCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: VSMAPDTYIAAYSLI*HQWERRPLDLWRLD Trigger: ATCAAGCCTCCATAGATCCAAGGGCCTCCTCTCCCATTGATGTCAGATAAGGCTATATGCTGCTATATATGTATCTGGAGCCATGGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 90 bp | CAGGGAAGAACAACACCAGCTCCTGATTCAAAACATTCCTATCTCTaGAATTCTGGCAACAATGAGCATGGTGTGTTTCTCAAGAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: QGRTTPAPDSKHSYL*NSGNNEHGVFLKRC Trigger: ACACCTCTTGAGAAACACACCATGCTCATTGTTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTGGTGTTGTTCTTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR GCA 90 bp | CTAGATAACATGGATATGACTAACAAATGCAAACAAGCAGGTCACTaGAACACACACACACACACACACACACACAAAGAGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LDNMDMTNKCKQAGH*NTHTHTHTHKERER Trigger: TCTCTCTCTCTCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCAGTGACCTGCTTGTTTGCATTTGTTAGTCATATCCATGTTATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR GCA 90 bp | CAAACTATTTCACACAAACTAGATAACATGGATATGACTAACAAATaGAAACAAGCAGGTCACTGCAACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: QTISHKLDNMDMTNK*KQAGHCNTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTTGCAGTGACCTGCTTGTTTGCATTTGTTAGTCATATCCATGTTATCTAGTTTGTGTGAAATAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 90 bp | TTCTATACTACATCTACACTAGCTAAAGGAAGAGATCAAGTCCCTTaGGTAGCTACTCAGTTTGTAAGTAATAAGTTCCTGTTTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: FYTTSTLAKGRDQVP*VATQFVSNKFLFPG Trigger: TCCTGGAAACAGGAACTTATTACTTACAAACTGAGTAGCTACTCAAGGGACTTGATCTCTTCCTTTAGCTAGTGTAGATGTAGTATAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR GCA 90 bp | TCAGACACCGTGCTAGCTATTTGCATGAATTGTCCATTTGGTCTTTaGAACATTCCCATAGGACAGGAAGATATTATATGTATATTTACA | + |
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Preference number: 1 (lower is better) Translates to: SDTVLAICMNCPFGL*NIPIGQEDIICIFT Trigger: TGTAAATATACATATAATATCTTCCTGTCCTATGGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCACGGTGTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCTGATTCAAAACATTCCTATCTCTGGAATTCTGGCAACAATGAGCATGGTTTCTCAAGAGGTGTaGAGTGATCACTTGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: QLLIQNIPISGILATMSMVSQEV*SDHLMV Trigger: GACCATCAAGTGATCACTTCACACCTCTTGAGAAAC...CATGCTCATTGTTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAATATGTACTGTCATGGAGAACACTGTGTGAGAACACAGGATGGGAGAGGTCTTAGGTTATTATaGGAAACAAAGAACCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SANMYCHGEHCVRTQDGRGLRLL*ETKNQA Trigger: TGCCTGGTTCTTTGTTTCTCATAATAACCTAAGACC...TCTCCCATCCTGTGTTCTCACACAGTGTTCTCCATGACAGTACATATTAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTTTTGTGGCATTCTTCATGTGGAGAGCCTATATCTAACAGGGGTCATGTGTCCATTTGGTCTTTaGAACATTCCCATAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: FLFCGILHVESLYLTGVMCPFGL*NIPIGQ Trigger: CTGTCCTATGGGAATGTTGCAAAGACCAAATGGACA...CATGACCCCTGTTAGATATAGGCTCTCCACATGAAGAATGCCACAAAAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAATATGTACTGTCATGGAGAACACTGTGTGAGAACACAGGATGGGAGATGGTTTTCTCTTTTGTaGCATTCTTCATGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SANMYCHGEHCVRTQDGRWFSLL*HSSCGE Trigger: CTCTCCACATGAAGAATGCCACAAAAGAGAAAACCA...TCTCCCATCCTGTGTTCTCACACAGTGTTCTCCATGACAGTACATATTAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCCAAGCATGATTACTTTCATGGTTTTCTCTTTTGTGGCATTCTTCATGTGACCGTGCTAGCTATTTaGATGAATTGTCCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: PPKHDYFHGFLFCGILHVTVLAI*MNCPFG Trigger: ACCAAATGGACAATTCATGCAAATAGCTAGCACGGT...CACATGAAGAATGCCACAAAAGAGAAAACCATGAAAGTAATCATGCTTGGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCCTGATTCAAAACATTCCTATCTCTGGAATTCTGGCAACAATGAGCATGCATGAATTGTCCATTTaGTCTTTGCAACATTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QLLIQNIPISGILATMSMHELSI*SLQHSH Trigger: ATGGGAATGTTGCAAAGACCAAATGGACAATTCATG...CATGCTCATTGTTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR TCA 90 bp | ATTATGAGAAACAAAGAACCAGGCAGCATAGATAAAGAAAAGCCGTTTCATTGGAGAGATCAAGTCCCTTaGGTAGCTACTCAGTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: IMRNKEPGSIDKEKPFHWRDQVP*VATQFV Trigger: TACAAACTGAGTAGCTACTCAAGGGACTTGATCTCT...CCAATGAAACGGCTTTTCTTTATCTATGCTGCCTGGTTCTTTGTTTCTCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 90 bp | GTCAGACACCGTGCTAGCTATTTGCATGAATTGTCCATTTGGTCTTaGCAACATTCCCATAGGACAGGAAGATATTATATGTATATTTAC | + |
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Preference number: 2 (lower is better) Translates to: VRHRASYLHELSIWS*QHSHRTGRYYMYIY Trigger: GTAAATATACATATAATATCTTCCTGTCCTATGGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCACGGTGTCTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 90 bp | GTGATATCTCTCCTCAAAATTCCTCAAATTGTTCTCTTGATTAATTaGGTGTGTGTGTGTGTGTGTGTGTGTGTATACTTGTGCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VISLLKIPQIVLLIN*VCVCVCVCVYLCLF Trigger: AAACAGGCACAAGTATACACACACACACACACACACACACACCAAATTAATCAAGAGAACAATTTGAGGAATTTTGAGGAGAGATATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 72 bp | TCAGCTAGGGGGATGCTTAGAGTTTTGATGTGGGAGTaGGTGAGTGGGTGGAGGAACTCCCTCATTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SARGMLRVLMWE*VSGWRNSLIEA Trigger: TGCCTCAATGAGGGAGTTCCTCCACCCACTCACCCACTCCCACATCAAAACTCTAAGCATCCCCCTAGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 72 bp | GATGCGTCAGCTAGGGGGATGCTTAGAGTTTTGATGTaGGAGTGGGTGAGTGGGTGGAGGAACTCCCTCATT | + |
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Preference number: 3 (lower is better) Translates to: DASARGMLRVLM*EWVSGWRNSLI Trigger: AATGAGGGAGTTCCTCCACCCACTCACCCACTCCCACATCAAAACTCTAAGCATCCCCCTAGCTGACGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 72 bp | ATGCTTAGAGTTTTGATGTGGGAGTGGGTGAGTGGGTaGAGGAACTCCCTCATTGAGGCAAAGGAGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLRVLMWEWVSG*RNSLIEAKERG Trigger: CCCTCTCTCCTTTGCCTCAATGAGGGAGTTCCTCCACCCACTCACCCACTCCCACATCAAAACTCTAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | GCTCCAGATACATATATAGCAGCATATAGCCTTATCTaGCATCAATGGGAGAGGAGGCCCTTGGATCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: APDTYIAAYSLI*HQWERRPLDLW Trigger: CCATAGATCCAAGGGCCTCCTCTCCCATTGATGTCAGATAAGGCTATATGCTGCTATATATGTATCTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | AGAACACAGGATGGGAGAATGAGGATGGTATTCTTATaGACATGCAGCCCAAATTACAGGGCCTTTACTGGA | + |
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Preference number: 3 (lower is better) Translates to: RTQDGRMRMVFL*TCSPNYRAFTG Trigger: TCCAGTAAAGGCCCTGTAATTTGGGCTGCATGTTCATAAGAATACCATCCTCATTCTCCCATCCTGTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR GCA 72 bp | CATCAAGAATTACTGTCAGACACCGTGCTAGCTATTTaGATGAATTGTCCATTTGGTCTTTGCAACATTCCC | + |
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Preference number: 3 (lower is better) Translates to: HQELLSDTVLAI*MNCPFGLCNIP Trigger: GGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCACGGTGTCTGACAGTAATTCTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 72 bp | GAACCAGGCAGCATAGATAAAGAAAAGCCGTTTCATTaGTCATTTGCAGTAATATACCTGCTGATTCACCAG | + |
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Preference number: 3 (lower is better) Translates to: EPGSIDKEKPFH*SFAVIYLLIHQ Trigger: CTGGTGAATCAGCAGGTATATTACTGCAAATGACCAATGAAACGGCTTTTCTTTATCTATGCTGCCTGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCTGATTCAAAACATTCCTATCTCTGGAATTCTGGCAACAATGAGCATGTCATGGTTTTCTCTTTaGTGGCATTCTTCATGTGGA | + |
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Preference number: 3 (lower is better) Translates to: QLLIQNIPISGILATMSMSWFSL*WHSSCG Trigger: TCCACATGAAGAATGCCACAAAAGAGAAAACCATGA...CATGCTCATTGTTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR CAA 90 bp | CAACACCAGCTCCTGATTCAAAACATTCCTATCTCTGGAATTCTGGCAACAATGAGCTATTTGCATGAATaGTCCATTTGGTCTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: QHQLLIQNIPISGILATMSYLHE*SIWSLQ Trigger: TTGCAAAGACCAAATGGACAATTCATGCAAATAGCT...CATTGTTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTGGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CCA 72 bp | GCAGTAATATACCTGCTGATTCACCAGAAGACAGTTTaGGCGGAATCCATTAGGATGTGTGTTTATAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: AVIYLLIHQKTV*AESIRMCVYRN Trigger: ATTTCTATAAACACACATCCTAATGGATTCCGCCCAAACTGTCTTCTGGTGAATCAGCAGGTATATTACTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR-3UTR CAA 90 bp | TTACCACCCAAGCATGATTACTTTCATGGTTTTCTCTTTTGTGGCATTCTTCATAAGAGATCAAGTCCCTaGAGTAGCTACTCAGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LPPKHDYFHGFLFCGILHKRSSP*SSYSVC Trigger: ACAAACTGAGTAGCTACTCAAGGGACTTGATCTCTT...ATGAAGAATGCCACAAAAGAGAAAACCATGAAAGTAATCATGCTTGGGTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | ACATCTACACTAGCTAAAGGAAGAGATCAAGTCCCTTaGGTAGCTACTCAGTTTGTAAGTAATAAGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TSTLAKGRDQVP*VATQFVSNKFL Trigger: CAGGAACTTATTACTTACAAACTGAGTAGCTACTCAAGGGACTTGATCTCTTCCTTTAGCTAGTGTAGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | AATTACTTTAGATCAGGGAAGAACAACACCAGCTCCTaGTTCAAAACATTCCTATCTCTGGAATTCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: NYFRSGKNNTSS*FKTFLSLEFWQ Trigger: TTGCCAGAATTCCAGAGATAGGAATGTTTTGAATCAGGAGCTGGTGTTGTTCTTCCCTGATCTAAAGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR GCA 72 bp | GTGCTAGCTATTTGCATGAATTGTCCATTTGGTCTTTaGAACATTCCCATAGGACAGGAAGATATTATATGT | + |
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Preference number: 3 (lower is better) Translates to: VLAICMNCPFGL*NIPIGQEDIIC Trigger: ACATATAATATCTTCCTGTCCTATGGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | AGAGAAATCAAAGTAAAGGTAGGAAACACATGTACATaGAGTCAGCTAATATGTACTGTCATGGAGAACACT | + |
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Preference number: 3 (lower is better) Translates to: REIKVKVGNTCT*SQLICTVMENT Trigger: AGTGTTCTCCATGACAGTACATATTAGCTGACTTCATGTACATGTGTTTCCTACCTTTACTTTGATTTCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR TCA 72 bp | TGTGCATGTATGTATAAGAAGTATCCTCATGAAAAGTaGTTACTCTGGGTATGGCTACAAATATCTACAGAT | + |
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Preference number: 3 (lower is better) Translates to: CACMYKKYPHEK*LLWVWLQISTD Trigger: ATCTGTAGATATTTGTAGCCATACCCAGAGTAATCACTTTTCATGAGGATACTTCTTATACATACATGCACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTAATATGTACTGTCATGGAGAACACTGTGTGAGAACACAGGATGGGAGAAGTCTACACCCACAGTaGAGGCCACAACAAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SANMYCHGEHCVRTQDGRSLHPQ*RPQQRA Trigger: GGCTCTTTGTTGTGGCCTGCACTGTGGGTGTAGACT...TCTCCCATCCTGTGTTCTCACACAGTGTTCTCCATGACAGTACATATTAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTTGTGGCATTCTTCATGTGGAGAGCCTATATCTAACAGGGGTCATGAGATTCCCAGCACAGTaGGCAGTGTGGAGAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FLFCGILHVESLYLTGVMRFPAQ*AVWRGR Trigger: TCTGCCTCTCCACACTGCCCACTGTGCTGGGAATCT...CATGACCCCTGTTAGATATAGGCTCTCCACATGAAGAATGCCACAAAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR TCA 90 bp | GATCACTTGATGGTCTTAGGTTATTATGAGAAACAAAGAACCAGGCAGCATAGATGCACTTCTGAGTACTaGGCTCAGCCCCATCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: DHLMVLGYYEKQRTRQHRCTSEY*AQPHLH Trigger: GTGAAGATGGGGCTGAGCTCAGTACTCAGAAGTGCA...TCTATGCTGCCTGGTTCTTTGTTTCTCATAATAACCTAAGACCATCAAGTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR GCA 90 bp | GATCACTTGATGGTCTTAGGTTATTATGAGAAACAAAGAACCAGGCAGCATAGAACAATGCGGGGAAGGTaGTCACCAAAGCGATGCACA | + |
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Preference number: 4 (lower is better) Translates to: DHLMVLGYYEKQRTRQHRTMRGR*SPKRCT Trigger: TGTGCATCGCTTTGGTGAGCACCTTCCCCGCATTGT...TCTATGCTGCCTGGTTCTTTGTTTCTCATAATAACCTAAGACCATCAAGTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR GCA 90 bp | CCACCCAAGCATGATTACTTTCATGGTTTTCTCTTTTGTGGCATTCTTCATGTGTGCTCACCAAAGCGATaGACAAGGGATAAGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: PPKHDYFHGFLFCGILHVCSPKR*TRDKPI Trigger: GATTGGCTTATCCCTTGTGCATCGCTTTGGTGAGCA...CACATGAAGAATGCCACAAAAGAGAAAACCATGAAAGTAATCATGCTTGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR CCA 90 bp | TCAGCTAATATGTACTGTCATGGAGAACACTGTGTGAGAACACAGGATGGGAGAGGGATAAGCCAATCATaGGGATGTAGAAAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SANMYCHGEHCVRTQDGRGISQS*GCRKAV Trigger: TACTGCTTTTCTACATCCCCATGATTGGCTTATCCC...TCTCCCATCCTGTGTTCTCACACAGTGTTCTCCATGACAGTACATATTAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCTTTTGTGGCATTCTTCATGTGGAGAGCCTATATCTAACAGGGGTCATGAATTCTTCCAGACCTTaGAAGCCTGTCAGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FLFCGILHVESLYLTGVMNSSRP*KPVRKK Trigger: TTTCTTCCTGACAGGCTTTCAAGGTCTGGAAGAATT...CATGACCCCTGTTAGATATAGGCTCTCCACATGAAGAATGCCACAAAAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR GCA 90 bp | GATCACTTGATGGTCTTAGGTTATTATGAGAAACAAAGAACCAGGCAGCATAGATGGCTTTTTGGAGGCTaGTGTTGTAAAGGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DHLMVLGYYEKQRTRQHRWLFGG*CCKGWP Trigger: TGGCCATCCTTTACAACAGCAGCCTCCAAAAAGCCA...TCTATGCTGCCTGGTTCTTTGTTTCTCATAATAACCTAAGACCATCAAGTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 72 bp | ATTACTGTCAGACACCGTGCTAGCTATTTGCATGAATaGTCCATTTGGTCTTTGCAACATTCCCATAGGACA | + |
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Preference number: 4 (lower is better) Translates to: ITVRHRASYLHE*SIWSLQHSHRT Trigger: TGTCCTATGGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCACGGTGTCTGACAGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR GCA 90 bp | TTACCACCCAAGCATGATTACTTTCATGGTTTTCTCTTTTGTGGCATTCTTCATTCAGAAGATGTACAATaGGGGGAAGGTGCTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPPKHDYFHGFLFCGILHSEDVQ*GEGAHQ Trigger: TTGGTGAGCACCTTCCCCGCATTGTACATCTTCTGA...ATGAAGAATGCCACAAAAGAGAAAACCATGAAAGTAATCATGCTTGGGTGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTTTGTGGCATTCTTCATGTGGAGAGCCTATATCTAACAGGGGTCATGGGTAGAATAACGCAGTaGGTTGCAAATTGCTACATA | + |
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Preference number: 4 (lower is better) Translates to: FLFCGILHVESLYLTGVMGRITQ*VANCYI Trigger: TATGTAGCAATTTGCAACCCACTGCGTTATTCTACC...CATGACCCCTGTTAGATATAGGCTCTCCACATGAAGAATGCCACAAAAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR CCA 90 bp | ATTATGAGAAACAAAGAACCAGGCAGCATAGATAAAGAAAAGCCGTTTCATTGGTTGCCTAGTACAGCATaGAGGATGAGGGTGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: IMRNKEPGSIDKEKPFHWLPSTA*RMRVYE Trigger: CTCATACACCCTCATCCTCCATGCTGTACTAGGCAA...CCAATGAAACGGCTTTTCTTTATCTATGCTGCCTGGTTCTTTGTTTCTCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR CCA 90 bp | GATCACTTGATGGTCTTAGGTTATTATGAGAAACAAAGAACCAGGCAGCATAGAGAATACCAATCTCTCTaGCATCAAACCAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: DHLMVLGYYEKQRTRQHREYQSL*HQTRRF Trigger: GAATCTTCTGGTTTGATGCCAGAGAGATTGGTATTC...TCTATGCTGCCTGGTTCTTTGTTTCTCATAATAACCTAAGACCATCAAGTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 72 bp | CGTGCTAGCTATTTGCATGAATTGTCCATTTGGTCTTaGCAACATTCCCATAGGACAGGAAGATATTATATG | + |
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Preference number: 4 (lower is better) Translates to: RASYLHELSIWS*QHSHRTGRYYM Trigger: CATATAATATCTTCCTGTCCTATGGGAATGTTGCAAAGACCAAATGGACAATTCATGCAAATAGCTAGCACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR TCA 90 bp | CTCATGAAAAGTGATTACTCTGGGTATGGCTACAAATATCTACAGATGAACAAATGGATGAAGAATAGCTaGGTAAAGCAGGCAGGAATA | + |
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Preference number: 4 (lower is better) Translates to: LMKSDYSGYGYKYLQMNKWMKNS*VKQAGI Trigger: TATTCCTGCCTGCTTTACTCAGCTATTCTTCATCCA...TTTGTTCATCTGTAGATATTTGTAGCCATACCCAGAGTAATCACTTTTCATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 72 bp | CTCCTCAAAATTCCTCAAATTGTTCTCTTGATTAATTaGGTGTGTGTGTGTGTGTGTGTGTGTGTATACTTG | + |
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Preference number: 4 (lower is better) Translates to: LLKIPQIVLLIN*VCVCVCVCVYL Trigger: CAAGTATACACACACACACACACACACACACACCAAATTAATCAAGAGAACAATTTGAGGAATTTTGAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| 3UTR CAA 72 bp | GTGATATCTCTCCTCAAAATTCCTCAAATTGTTCTCTaGATTAATTTGGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VISLLKIPQIVL*INLVCVCVCVC Trigger: ACACACACACACACACACACACACCAAATTAATCAAGAGAACAATTTGAGGAATTTTGAGGAGAGATATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS-3UTR TCA 90 bp | CTCATGAAAAGTGATTACTCTGGGTATGGCTACAAATATCTACAGATGAACAAAAGTACTGCACAGATATaGGAGATACAGGTATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LMKSDYSGYGYKYLQMNKSTAQI*EIQVLR Trigger: TCTCAATACCTGTATCTCTCATATCTGTGCAGTACT...TTTGTTCATCTGTAGATATTTGTAGCCATACCCAGAGTAATCACTTTTCATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS GCA 90 bp | AATAGATACACATATGACATCAGAAGATGTACAATGCGGGGAAGGTaGTCACCAAAGCGATGCACAAGGGATAAGCCAATCATGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: NRYTYDIRRCTMRGR*SPKRCTRDKPIMGM Trigger: CATCCCCATGATTGGCTTATCCCTTGTGCATCGCTTTGGTGAGCACCTTCCCCGCATTGTACATCTTCTGATGTCATATGTGTATCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056235.2 ENSMUST00000215606.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTAATATGTACTGTCATGGAGAACACTGTGTGAGAACACAGGATGGGAGAGATACGCTGTCGTATTaGCTTGGTCTTGATGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SANMYCHGEHCVRTQDGRDTLSY*LGLDAV Trigger: TACAGCATCAAGACCAAGCAAATACGACAGCGTATC...TCTCCCATCCTGTGTTCTCACACAGTGTTCTCCATGACAGTACATATTAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215606.2 |
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| CDS GCA 72 bp | ACATATGACATCAGAAGATGTACAATGCGGGGAAGGTaGTCACCAAAGCGATGCACAAGGGATAAGCCAATC | + |
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Preference number: 6 (lower is better) Translates to: TYDIRRCTMRGR*SPKRCTRDKPI Trigger: GATTGGCTTATCCCTTGTGCATCGCTTTGGTGAGCACCTTCCCCGCATTGTACATCTTCTGATGTCATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056235.2 ENSMUST00000215606.2 |
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| CDS CCA 72 bp | ATAGGTTCATGGAGAGTGGCATCAGTCCGGATGACATaGAGAATAGTGAGGTTTCCTAAAATGACTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: IGSWRVASVRMT*RIVRFPKMTIK Trigger: CTTAATAGTCATTTTAGGAAACCTCACTATTCTCCATGTCATCCGGACTGATGCCACTCTCCATGAACCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056235.2 ENSMUST00000215606.2 |
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