Pregenerated sensors for OLFR577 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043354Ensembl transcript IDs: ENSMUST00000051505.2, ENSMUST00000214080.2, ENSMUST00000215237.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTCCAAAATCTTCAATGGCCCAGCTCTCACATGTCTTCTAAGGTaGGAACTCTCTCTCTCTAAAGACAGCTTTCTTTATCCTCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: LSKIFNGPALTCLLR*ELSLSKDSFLYPLY Trigger: GTAAAGAGGATAAAGAAAGCTGTCTTTAGAGAGAGAGAGTTCTCACCTTAGAAGACATGTGAGAGCTGGGCCATTGAAGATTTTGGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR GCA 90 bp | CTCGTGACTATGGACTTGGTGTCTAGCTGTTTCTTATTTGAATTATaGACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LVTMDLVSSCFLFEL*TMYCCVETWHPHSF Trigger: GAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTCAAATAAGAAACAGCTAGACACCAAGTCCATAGTCACGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGGCCCTGCCATGGGATTTAGTCTTCTCAGTGCAGTGCCTGGGTTCCACACAGTTTTCATTTCTTaGGCAGAAAGTAGGATCATC | + |
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Preference number: 2 (lower is better) Translates to: TCGPAMGFSLLSAVPGFHTVFIS*AESRII Trigger: GATGATCCTACTTTCTGCTCAAGAAATGAAAACTGT...GTGGAACCCAGGCACTGCACTGAGAAGACTAAATCCCATGGCAGGGCCACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGAGTCTTCTCAGTGCAGTaGCTGGGTTCCACAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VTATARTALTKIISDLERVFSVQ*LGSTSR Trigger: TCTACTTGTGGAACCCAGGCACTGCACTGAGAAGAC...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCCATGTGGCCCTGCCATaGGATTTAGTCTTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: ELCTMYCCVETWHPHSFLHVALP*DLVFSV Trigger: CACTGAGAAGACTAAATCCCATGGCAGGGCCACATG...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAGTTTTTCATGCCAATCCAACAGTTTGGACTATATTAGCCTCTCTCTCCGTCTTCTCAGTGCAGTaGCTGGGTTCCACAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GLVFHANPTVWTILASLSVFSVQ*LGSTSR Trigger: TCTACTTGTGGAACCCAGGCACTGCACTGAGAAGAC...GGAGAGAGAGGCTAATATAGTCCAAACTGTTGGATTGGCATGAAAAACTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR GCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCAGGAACCTGAGTGTATaGACACACTCTCACACACTC | + |
|
Preference number: 2 (lower is better) Translates to: ELCTMYCCVETWHPHSFLRNLSV*THSHTL Trigger: GAGTGTGTGAGAGTGTGTGCATACACTCAGGTTCCT...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGAAAGGCTGCGATAATCTaGATTACTTTCACTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGKAAII*ITFTHW Trigger: CCAGTGAGTGAAAGTAATTCAGATTATCGCAGCCTT...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCACATGTCTTCTAAGGTaGGAACTCTCTCTCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ELCTMYCCVETWHPHSFLTCLLR*ELSLSK Trigger: TTTAGAGAGAGAGAGTTCTCACCTTAGAAGACATGT...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR GCA 90 bp | CAATGGTGCAACTTCATACAAGCTTCCAAAATTTCAGTGGCTTCATGTTTCTATAGGAACCTGAGTGTATaGACACACTCTCACACACTC | + |
|
Preference number: 2 (lower is better) Translates to: QWCNFIQASKISVASCFYRNLSV*THSHTL Trigger: GAGTGTGTGAGAGTGTGTGCATACACTCAGGTTCCT...ATAGAAACATGAAGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCCTTTATCCTCTTTACTaGAAATCAGCTGTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ELCTMYCCVETWHPHSFLLYPLY*KSAVFS Trigger: AGAGAAGACAGCTGATTTTCAGTAAAGAGGATAAAG...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTCATGCTGGGCTTGTAGGATaGAATATTTACATGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: THLFMTFWMSCVIDLFPHAGLVG*NIYMWP Trigger: GGGCCACATGTAAATATTCCATCCTACAAGCCCAGC...ATGAGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTCTCCAAAATCTTCAATaGCCCAGCTCTCACATGTCT | + |
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Preference number: 2 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPLQNLQ*PSSHMS Trigger: AGACATGTGAGAGCTGGGCCATTGAAGATTTTGGAG...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR CAA 90 bp | CTTGAGCAGAAAGTAGGATCATCTATATTTCTGCTGCCATGTTTTTaGCAGTATGATTTACCACACCATTCTGTATTACATACCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: LEQKVGSSIFLLPCF*QYDLPHHSVLHTSI Trigger: TATGGAGGTATGTAATACAGAATGGTGTGGTAAATCATACTGCAAAAAACATGGCAGCAGAAATATAGATGATCCTACTTTCTGCTCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGGTGCAACTTCATACAAGCTTCCAAAATTTCAGTGGCTTCATGTTTCTATACAGTTTTCATTTCTTaGGCAGAAAGTAGGATCATC | + |
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Preference number: 2 (lower is better) Translates to: QWCNFIQASKISVASCFYTVFIS*AESRII Trigger: GATGATCCTACTTTCTGCTCAAGAAATGAAAACTGT...ATAGAAACATGAAGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGGTGCAACTTCATACAAGCTTCCAAAATTTCAGTGGCTTCATGTTTCTATCTTTATCCTCTTTACTaGAAATCAGCTGTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QWCNFIQASKISVASCFYLYPLY*KSAVFS Trigger: AGAGAAGACAGCTGATTTTCAGTAAAGAGGATAAAG...ATAGAAACATGAAGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTACATGTCTTCTAAGGTaGGAACTCTCTCTCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPTCLLR*ELSLSK Trigger: TTTAGAGAGAGAGAGTTCTCACCTTAGAAGACATGT...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGGTGCAACTTCATACAAGCTTCCAAAATTTCAGTGGCTTCATGTTTCTATAAATTATCTCAGACCTaGAGAGATAGCTCAGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: QWCNFIQASKISVASCFYKLSQT*RDSSVI Trigger: TATCACTGAGCTATCTCTCCAGGTCTGAGATAATTT...ATAGAAACATGAAGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAATGAAATTACAGGTACACATCACAAACATAGAGTTCAATGGTGCAACTTCTGGTTTAGTTTTTCATaGCAATCCAACAGTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: CNEITGTHHKHRVQWCNFWFSFS*QSNSLD Trigger: GTCCAAACTGTTGGATTGGCATGAAAAACTAAACCA...GAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAATTTCATTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGACTGCTGCCATGTTTTTaGCAGTATGATTTACCACAC | + |
|
Preference number: 3 (lower is better) Translates to: VTATARTALTKIISDLERLLPCF*QYDLPH Trigger: GTGTGGTAAATCATACTGCAAAAAACATGGCAGCAG...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGATGCCAATCCAACAGTTaGGACTATATTAGCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGCQSNS*DYISLS Trigger: AGAGAGGCTAATATAGTCCAAACTGTTGGATTGGCA...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR TCA 72 bp | ATCTTCAATGGCCCAGCTCTCACATGTCTTCTAAGGTaGGAACTCTCTCTCTCTAAAGACAGCTTTCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: IFNGPALTCLLR*ELSLSKDSFLY Trigger: ATAAAGAAAGCTGTCTTTAGAGAGAGAGAGTTCTCACCTTAGAAGACATGTGAGAGCTGGGCCATTGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGAAAGCATGTTCAGAGGTaGCACATTTTTGTAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: VTATARTALTKIISDLERKHVQR*HIFVTD Trigger: ATCAGTTACAAAAATGTGCAACCTCTGAACATGCTT...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGAAAGCATGTTCAGAGGTaGCACATTTTTGTAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGKHVQR*HIFVTD Trigger: ATCAGTTACAAAAATGTGCAACCTCTGAACATGCTT...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR GCA 72 bp | TCTAGCTGTTTCTTATTTGAATTATGCACTATGTACTaGTGTGTAGAAACATGGCATCCCCATAGTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: SSCFLFELCTMY*CVETWHPHSFL Trigger: GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTCAAATAAGAAACAGCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTCATCTGCTGCCATGTTTTTaGCAGTATGATTTACCACAC | + |
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Preference number: 3 (lower is better) Translates to: THLFMTFWMSCVIDLFPHLLPCF*QYDLPH Trigger: GTGTGGTAAATCATACTGCAAAAAACATGGCAGCAG...ATGAGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR GCA 72 bp | ATTACAGGTACACATCACAAACATAGAGTTCAATGGTaGAACTTCATACAAGCTTCCAAAATTTCAGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ITGTHHKHRVQW*NFIQASKISVA Trigger: AGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR CCA 72 bp | CACCTTGGTTTAGTTTTTCATGCCAATCCAACAGTTTaGACTATATTAGCCTCTCTCTCCAAAATCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: HLGLVFHANPTV*TILASLSKIFN Trigger: ATTGAAGATTTTGGAGAGAGAGGCTAATATAGTCCAAACTGTTGGATTGGCATGAAAAACTAAACCAAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| 3UTR CCA 72 bp | GAAATTACAGGTACACATCACAAACATAGAGTTCAATaGTGCAACTTCATACAAGCTTCCAAAATTTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: EITGTHHKHRVQ*CNFIQASKISV Trigger: CACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | ACATGTGGCCCTGCCATGGGATTTAGTCTTCTCAGTGCAGTGCCTGGGTTCCACCATAGGAGAAGAGGATaGGCAAAGAGTCCACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCGPAMGFSLLSAVPGFHHRRRG*AKSPLP Trigger: TGGGAGTGGACTCTTTGCTCATCCTCTTCTCCTATG...GTGGAACCCAGGCACTGCACTGAGAAGACTAAATCCCATGGCAGGGCCACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CCA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGACAGCCCTTGAGGCAATaGACAATACGGTGCGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VTATARTALTKIISDLERQPLRQ*TIRCAE Trigger: TTCTGCGCACCGTATTGTCCATTGCCTCAAGGGCTG...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGATGGAAACCAGGTACATaGGACAGAGTGGAAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VTATARTALTKIISDLERWKPGT*DRVEGR Trigger: TCTCCCTTCCACTCTGTCTCATGTACCTGGTTTCCA...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGACAATCACTGTGTGGGTaGGGATGGAAGCATAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGQSLCG*GWKHSA Trigger: TGCACTATGCTTCCATCCTCACCCACACAGTGATTG...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGACATAGGAGAAGAGGATaGGCAAAGAGTCCACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTATARTALTKIISDLERHRRRG*AKSPLP Trigger: TGGGAGTGGACTCTTTGCTCATCCTCTTCTCCTATG...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGAATGGCTAATGTCTCGTaGTCCCACCCAAAAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGMANVS*SHPKDA Trigger: GGCATCTTTTGGGTGGGAGCACGAGACATTAGCCAT...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCAAGGCAATGGGAAAATaGGTGCAACACTACGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ELCTMYCCVETWHPHSFLKAMGK*VQHYGP Trigger: TGGGCCGTAGTGTTGCACTCATTTTCCCATTGCCTT...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCGATACACAAAGCCCATaGCCACCTGAACTAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: ELCTMYCCVETWHPHSFLDTQSP*PPELDG Trigger: CCCATCTAGTTCAGGTGGTCATGGGCTTTGTGTATC...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GGTTTAGTTTTTCATGCCAATCCAACAGTTTGGACTATATTAGCCTCTCTCTCCAAGGCAATGGGAAAATaGGTGCAACACTACGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLVFHANPTVWTILASLSKAMGK*VQHYGP Trigger: TGGGCCGTAGTGTTGCACTCATTTTCCCATTGCCTT...GGAGAGAGAGGCTAATATAGTCCAAACTGTTGGATTGGCATGAAAAACTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | GAATTATGCACTATGTACTGCTGTGTAGAAACATGGCATCCCCATAGTTTCCTCAAATGCTGTTTGCCTTaGTGTCTGCACAGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ELCTMYCCVETWHPHSFLKCCLP*CLHRPV Trigger: AACTGGCCTGTGCAGACATCAAGGCAAACAGCATTT...GAGGAAACTATGGGGATGCCATGTTTCTACACAGCAGTACATAGTGCATAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CCA 90 bp | TGTAATGAAATTACAGGTACACATCACAAACATAGAGTTCAATGGTGCAACTTCCAGCCCTTGAGGCAATaGACAATACGGTGCGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CNEITGTHHKHRVQWCNFQPLRQ*TIRCAE Trigger: TTCTGCGCACCGTATTGTCCATTGCCTCAAGGGCTG...GAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAATTTCATTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | ACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTCATCAATCACTGTGTGGGTaGGGATGGAAGCATAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: THLFMTFWMSCVIDLFPHQSLCG*GWKHSA Trigger: TGCACTATGCTTCCATCCTCACCCACACAGTGATTG...ATGAGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTGATACACAAAGCCCATaGCCACCTGAACTAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPDTQSP*PPELDG Trigger: CCCATCTAGTTCAGGTGGTCATGGGCTTTGTGTATC...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR GCA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTATGGCTAATGTCTCGTaGTCCCACCCAAAAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPMANVS*SHPKDA Trigger: GGCATCTTTTGGGTGGGAGCACGAGACATTAGCCAT...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR GCA 90 bp | CAATGGTGCAACTTCATACAAGCTTCCAAAATTTCAGTGGCTTCATGTTTCTATGTTTGCCTTGATGTCTaGACAGGCCAGTTTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: QWCNFIQASKISVASCFYVCLDV*TGQFHH Trigger: GTGATGAAACTGGCCTGTGCAGACATCAAGGCAAAC...ATAGAAACATGAAGCCACTGAAATTTTGGAAGCTTGTATGAAGTTGCACCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR TCA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTAAATGCTGTTTGCCTTaGTGTCTGCACAGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPKCCLP*CLHRPV Trigger: AACTGGCCTGTGCAGACATCAAGGCAAACAGCATTT...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAATTACAGGTACACATCACAAACATAGAGTTCAATGGTGCAACTTCGTTTGCCTTGATGTCTaGACAGGCCAGTTTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: CNEITGTHHKHRVQWCNFVCLDV*TGQFHH Trigger: GTGATGAAACTGGCCTGTGCAGACATCAAGGCAAAC...GAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAATTTCATTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CCA 90 bp | TGTAATGAAATTACAGGTACACATCACAAACATAGAGTTCAATGGTGCAACTTCGAGCATGAAAGGCAATaGGAAAATGAGTGCAACACT | + |
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Preference number: 4 (lower is better) Translates to: CNEITGTHHKHRVQWCNFEHERQ*ENECNT Trigger: AGTGTTGCACTCATTTTCCCATTGCCTTTCATGCTC...GAAGTTGCACCATTGAACTCTATGTTTGTGATGTGTACCTGTAATTTCATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS GCA 90 bp | ACAGTAAGGGAACCGTTTGAGCATGAAAGGCAATGGGAAAATGAGTaGAACACTACGGCCCAGAGAGGCCAGACCTATTCTGACAATCAC | + |
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Preference number: 5 (lower is better) Translates to: TVREPFEHERQWENE*NTTAQRGQTYSDNH Trigger: GTGATTGTCAGAATAGGTCTGGCCTCTCTGGGCCGTAGTGTTGCACTCATTTTCCCATTGCCTTTCATGCTCAAACGGTTCCCTTACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051505.2 ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGATCAATCAGGAGTGAGATGTGATTGCACATACACTCGTGACTATGGACATGTATTGAGAGCTTaGAGTCTTTCAGCCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: ERDQSGVRCDCTYTRDYGHVLRA*SLSALE Trigger: CTCAAGGGCTGAAAGACTCAAAGCTCTCAATACATG...TCCATAGTCACGAGTGTATGTGCAATCACATCTCACTCCTGATTGATCTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CAA 90 bp | GTAACAGCAACAGCCAGAACAGCACTGACAAAAATTATCTCAGACCTGGAGAGATGTGAAACGCATGTATaGAGAGCTTTGAGTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: VTATARTALTKIISDLERCETHV*RALSLS Trigger: TGAAAGACTCAAAGCTCTCAATACATGCGTTTCACA...TCTCTCCAGGTCTGAGATAATTTTTGTCAGTGCTGTTCTGGCTGTTGCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CAA 90 bp | GGTTTAGTTTTTCATGCCAATCCAACAGTTTGGACTATATTAGCCTCTCTCTCCTGTGAAACGCATGTATaGAGAGCTTTGAGTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GLVFHANPTVWTILASLSCETHV*RALSLS Trigger: TGAAAGACTCAAAGCTCTCAATACATGCGTTTCACA...GGAGAGAGAGGCTAATATAGTCCAAACTGTTGGATTGGCATGAAAAACTAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS-3UTR CAA 90 bp | ATCACTCATTTATTTATGACCTTTTGGATGTCATGTGTGATTGATCTCTTCCCTCATGTATTGAGAGCTTaGAGTCTTTCAGCCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: ITHLFMTFWMSCVIDLFPHVLRA*SLSALE Trigger: CTCAAGGGCTGAAAGACTCAAAGCTCTCAATACATG...AGGGAAGAGATCAATCACACATGACATCCAAAAGGTCATAAATAAATGAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS CCA 72 bp | GCCACAGTAAGGGAACCGTTTGAGCATGAAAGGCAATaGGAAAATGAGTGCAACACTACGGCCCAGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATVREPFEHERQ*ENECNTTAQRG Trigger: GCCTCTCTGGGCCGTAGTGTTGCACTCATTTTCCCATTGCCTTTCATGCTCAAACGGTTCCCTTACTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051505.2 ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS GCA 72 bp | GAACCGTTTGAGCATGAAAGGCAATGGGAAAATGAGTaGAACACTACGGCCCAGAGAGGCCAGACCTATTCT | + |
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Preference number: 6 (lower is better) Translates to: EPFEHERQWENE*NTTAQRGQTYS Trigger: AGAATAGGTCTGGCCTCTCTGGGCCGTAGTGTTGCACTCATTTTCCCATTGCCTTTCATGCTCAAACGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051505.2 ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS TCA 72 bp | AACGCATGTATTGAGAGCTTTGAGTCTTTCAGCCCTTaGGGCAATGGACAATACGGTGCGCAGAATAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: NACIESFESFSP*GNGQYGAQNKC Trigger: GCACTTATTCTGCGCACCGTATTGTCCATTGCCTCAAGGGCTGAAAGACTCAAAGCTCTCAATACATGCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051505.2 ENSMUST00000214080.2 ENSMUST00000215237.2 |
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| CDS CCA 72 bp | GTTTCCCAAAGCGGTGGATTACAGACAATCCTATCATaGGAGTATAGAACAGAAGCACAGCAGAGATGTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSQSGGLQTILS*EYRTEAQQRCV Trigger: CACACATCTCTGCTGTGCTTCTGTTCTATACTCCCATGATAGGATTGTCTGTAATCCACCGCTTTGGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051505.2 ENSMUST00000214080.2 ENSMUST00000215237.2 |
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