Pregenerated sensors for OLFR574 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045824Ensembl transcript IDs: ENSMUST00000052997.6, ENSMUST00000211329.2
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CCTTCTAGCCCACCTTCCTCTAAGGCTCCTCATACTGTAGCCCCTTaGATCCTTGAATCGGAACAGCTGGAATATGGCTTGGCGAATAAC | + |
Preference number: 5 (lower is better) Translates to: PSSPPSSKAPHTVAP*ILESEQLEYGLANN Trigger: GTTATTCGCCAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGGGGCTACAGTATGAGGAGCCTTAGAGGAAGGTGGGCTAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS GCA 72 bp | CCACCTTCCTCTAAGGCTCCTCATACTGTAGCCCCTTaGATCCTTGAATCGGAACAGCTGGAATATGGCTTG | + |
Preference number: 6 (lower is better) Translates to: PPSSKAPHTVAP*ILESEQLEYGL Trigger: CAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGGGGCTACAGTATGAGGAGCCTTAGAGGAAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS TCA 72 bp | GAAACCAAAGGACACCAAGGACTGTGGGAAGGGTTGTaGTGGTCAGACCTAGATCAACAACAGACAGCATGG | + |
Preference number: 6 (lower is better) Translates to: ETKGHQGLWEGL*WSDLDQQQTAW Trigger: CCATGCTGTCTGTTGTTGATCTAGGTCTGACCATCACAACCCTTCCCACAGTCCTTGGTGTCCTTTGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS TCA 72 bp | GAACAGTGCGAAGGATCAGGACGTAGGAGAAAAGAATaGACAATAAGTCAGTGCCGTTCAGGTAGAGCTGAA | + |
Preference number: 6 (lower is better) Translates to: EQCEGSGRRRKE*TISQCRSGRAE Trigger: TTCAGCTCTACCTGAACGGCACTGACTTATTGTTCATTCTTTTCTCCTACGTCCTGATCCTTCGCACTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS CAA 72 bp | GTGACAAACACATGTGCTAAGAGCTTTCTGCTGTTTTaGAGGAGCCACGATGTTCAGAACAGTGCGAAGGAT | + |
Preference number: 6 (lower is better) Translates to: VTNTCAKSFLLF*RSHDVQNSAKD Trigger: ATCCTTCGCACTGTTCTGAACATCGTGGCTCCTCAAAAACAGCAGAAAGCTCTTAGCACATGTGTTTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS CAA 72 bp | ATAGGATTCAGCACAGGCGGCAAGAGCAGATACATATaGCCCAAAATACTACAGATCACCCTGGGAGTAGAA | + |
Preference number: 6 (lower is better) Translates to: IGFSTGGKSRYI*PKILQITLGVE Trigger: TTCTACTCCCAGGGTGATCTGTAGTATTTTGGGCAATATGTATCTGCTCTTGCCGCCTGTGCTGAATCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS CCA 72 bp | GTGTATTTGATTATATCTGGATGGAAGCAAAATGGATaGGAAAGCTCTTGGCCTCCTTGGAAGGACACACTC | + |
Preference number: 6 (lower is better) Translates to: VYLIISGWKQNG*ESSWPPWKDTL Trigger: GAGTGTGTCCTTCCAAGGAGGCCAAGAGCTTTCCCATCCATTTTGCTTCCATCCAGATATAATCAAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS CAA 72 bp | CCTTGCATCCTTGAATCGGAACAGCTGGAATATGGCTaGGCGAATAACCTTGGTCTTCAAGCTGTAAATGAT | + |
Preference number: 6 (lower is better) Translates to: PCILESEQLEYG*ANNLGLQAVND Trigger: ATCATTTACAGCTTGAAGACCAAGGTTATTCGCCAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |
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CDS CAA 72 bp | CAGAAGCTGCTGATCCAGGGGTTGGTGTATGTGTATTaGATTATATCTGGATGGAAGCAAAATGGATGGGAA | + |
Preference number: 6 (lower is better) Translates to: QKLLIQGLVYVY*IISGWKQNGWE Trigger: TTCCCATCCATTTTGCTTCCATCCAGATATAATCAAATACACATACACCAACCCCTGGATCAGCAGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052997.6 ENSMUST00000211329.2 |