RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR574 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045824

Ensembl transcript IDs: ENSMUST00000052997.6, ENSMUST00000211329.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CCTTCTAGCCCACCTTCCTCTAAGGCTCCTCATACTGTAGCCCCTTaGATCCTTGAATCGGAACAGCTGGAATATGGCTTGGCGAATAAC +
Preference number: 5 (lower is better)
Translates to: PSSPPSSKAPHTVAP*ILESEQLEYGLANN
Trigger: GTTATTCGCCAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGGGGCTACAGTATGAGGAGCCTTAGAGGAAGGTGGGCTAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS GCA 72 bp CCACCTTCCTCTAAGGCTCCTCATACTGTAGCCCCTTaGATCCTTGAATCGGAACAGCTGGAATATGGCTTG +
Preference number: 6 (lower is better)
Translates to: PPSSKAPHTVAP*ILESEQLEYGL
Trigger: CAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGGGGCTACAGTATGAGGAGCCTTAGAGGAAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS TCA 72 bp GAAACCAAAGGACACCAAGGACTGTGGGAAGGGTTGTaGTGGTCAGACCTAGATCAACAACAGACAGCATGG +
Preference number: 6 (lower is better)
Translates to: ETKGHQGLWEGL*WSDLDQQQTAW
Trigger: CCATGCTGTCTGTTGTTGATCTAGGTCTGACCATCACAACCCTTCCCACAGTCCTTGGTGTCCTTTGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS TCA 72 bp GAACAGTGCGAAGGATCAGGACGTAGGAGAAAAGAATaGACAATAAGTCAGTGCCGTTCAGGTAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: EQCEGSGRRRKE*TISQCRSGRAE
Trigger: TTCAGCTCTACCTGAACGGCACTGACTTATTGTTCATTCTTTTCTCCTACGTCCTGATCCTTCGCACTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS CAA 72 bp GTGACAAACACATGTGCTAAGAGCTTTCTGCTGTTTTaGAGGAGCCACGATGTTCAGAACAGTGCGAAGGAT +
Preference number: 6 (lower is better)
Translates to: VTNTCAKSFLLF*RSHDVQNSAKD
Trigger: ATCCTTCGCACTGTTCTGAACATCGTGGCTCCTCAAAAACAGCAGAAAGCTCTTAGCACATGTGTTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS CAA 72 bp ATAGGATTCAGCACAGGCGGCAAGAGCAGATACATATaGCCCAAAATACTACAGATCACCCTGGGAGTAGAA +
Preference number: 6 (lower is better)
Translates to: IGFSTGGKSRYI*PKILQITLGVE
Trigger: TTCTACTCCCAGGGTGATCTGTAGTATTTTGGGCAATATGTATCTGCTCTTGCCGCCTGTGCTGAATCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS CCA 72 bp GTGTATTTGATTATATCTGGATGGAAGCAAAATGGATaGGAAAGCTCTTGGCCTCCTTGGAAGGACACACTC +
Preference number: 6 (lower is better)
Translates to: VYLIISGWKQNG*ESSWPPWKDTL
Trigger: GAGTGTGTCCTTCCAAGGAGGCCAAGAGCTTTCCCATCCATTTTGCTTCCATCCAGATATAATCAAATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS CAA 72 bp CCTTGCATCCTTGAATCGGAACAGCTGGAATATGGCTaGGCGAATAACCTTGGTCTTCAAGCTGTAAATGAT +
Preference number: 6 (lower is better)
Translates to: PCILESEQLEYG*ANNLGLQAVND
Trigger: ATCATTTACAGCTTGAAGACCAAGGTTATTCGCCAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2
CDS CAA 72 bp CAGAAGCTGCTGATCCAGGGGTTGGTGTATGTGTATTaGATTATATCTGGATGGAAGCAAAATGGATGGGAA +
Preference number: 6 (lower is better)
Translates to: QKLLIQGLVYVY*IISGWKQNGWE
Trigger: TTCCCATCCATTTTGCTTCCATCCAGATATAATCAAATACACATACACCAACCCCTGGATCAGCAGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000052997.6
ENSMUST00000211329.2