Pregenerated sensors for OLFR571 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043310Ensembl transcript IDs: ENSMUST00000061738.4, ENSMUST00000214160.2, ENSMUST00000215773.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCCGGTGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPVPSKHRSG*SQSAIGWITGPPME Trigger: CTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCACCGGCATAGTCTCACAAGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 90 bp | AGCCTCCAAACGATGACACCATTGCATACACTAGCAAGCATTTGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLQTMTPLHTLASIC*KDPDIAVSCETMPV Trigger: CACCGGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAATGCTTGCTAGTGTATGCAATGGTGTCATCGTTTGGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 90 bp | GTTGTGTATAGACATGTATGGACCAAAGTGACCTGTCAGCTGCAGTaGAGCGAGTTTTCAGTCATGGAAGCCTTTGTGTTGGGAGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VVYRHVWTKVTCQLQ*SEFSVMEAFVLGVL Trigger: AAGAACTCCCAACACAAAGGCTTCCATGACTGAAAACTCGCTTCACTGCAGCTGACAGGTCACTTTGGTCCATACATGTCTATACACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR GCA 90 bp | CATGGCCTCACTAGGATGACTGTGGTATGGTACAGAATCCAGCTTTaGCTAATGTCACTTATAGATAGTACCACAGTAGATGGCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: HGLTRMTVVWYRIQL*LMSLIDSTTVDGSL Trigger: AAGTGAGCCATCTACTGTGGTACTATCTATAAGTGACATTAGGCAAAGCTGGATTCTGTACCATACCACAGTCATCCTAGTGAGGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 90 bp | GAAACAATTACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: ETITHGRSYRDKVWS*DKRMDHLETAISRD Trigger: ATCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTAATTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CCA 90 bp | AGTATGGACACTTTGCCCCTTCTTAGAATTGGAAACAATTACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SMDTLPLLRIGNNYP*KELQRQSLELRQKD Trigger: ATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTAATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 90 bp | TCAGGTGTCCAATTTCAAAGTCTCAGTGGAAATAGTTGGTGTGGGTaGGGATATGCAATAGTCTTATTAGGAGGTAAAGAACTGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SGVQFQSLSGNSWCG*GYAIVLLGGKELRM Trigger: CATTCTCAGTTCTTTACCTCCTAATAAGACTATTGCATATCCTCACCCACACCAACTATTTCCACTGAGACTTTGAAATTGGACACCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCATCTCCTCCATCCAGCTaGGGAGGAGGCTTATCTTAC | + |
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Preference number: 2 (lower is better) Translates to: TFMACLGSASVSHLPQGASPPSS*GGGLSY Trigger: GTAAGATAAGCCTCCTCCCCAGCTGGATGGAGGAGA...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCAATGTATGGACCAAAGTaGCCTGTCAGCTGCAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TFMACLGSASVSHLPQGAMYGPK*PVSCSE Trigger: TTCACTGCAGCTGACAGGTCACTTTGGTCCATACAT...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCAGTGTATAGACATGTATaGACCAAAGTGACCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TFMACLGSASVSHLPQGAVYRHV*TKVTCQ Trigger: CTGACAGGTCACTTTGGTCCATACATGTCTATACAC...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGGGCCAGGTAGAGAGATaGAGGACTTTCCATAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: HWKERPIGHKNFICPSTGGQVER*RTFHST Trigger: TGTGCTATGGAAAGTCCTTCATCTCTCTACCTGGCC...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGCTCAGGTCTGGACTGTaGCCTAGAATGTGTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: HWKERPIGHKNFICPSTGLRSGL*PRMCSR Trigger: TCTAGAACACATTCTAGGTCACAGTCCAGACCTGAG...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGGCGAGTTTTCAGTCATaGAAGCCTTTGTGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HWKERPIGHKNFICPSTGASFQS*KPLCWE Trigger: CTCCCAACACAAAGGCTTCCATGACTGAAAACTCGC...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCATACAGAATCCAGCTTTaGCTAATGTCACTTATAGAT | + |
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Preference number: 2 (lower is better) Translates to: TFMACLGSASVSHLPQGAYRIQL*LMSLID Trigger: ATCTATAAGTGACATTAGGCAAAGCTGGATTCTGTA...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGTGGAAGCCTTTGTGTTaGGAGTTCTTTACCACAACC | + |
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Preference number: 2 (lower is better) Translates to: HWKERPIGHKNFICPSTGWKPLC*EFFTTT Trigger: GGTTGTGGTAAAGAACTCCCAACACAAAGGCTTCCA...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAGCGAGTTTTCAGTCATaGAAGCCTTTGTGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLELRQKDGPSRDCHIQRASFQS*KPLCWE Trigger: CTCCCAACACAAAGGCTTCCATGACTGAAAACTCGC...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAATCTCCTCCATCCAGCTaGGGAGGAGGCTTATCTTAC | + |
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Preference number: 2 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKSPPSS*GGGLSY Trigger: GTAAGATAAGCCTCCTCCCCAGCTGGATGGAGGAGA...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCGTGCATTGGGGTCCTTaGACTTCTTTTTGGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSFSSSFFFLLFSALITPVHWGP*TSFWSP Trigger: AGGAGACCAAAAAGAAGTTCAAGGACCCCAATGCAC...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAAATAGTTGGTGTGGGTaGGGATATGCAATAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SLELRQKDGPSRDCHIQRNSWCG*GYAIVL Trigger: TAAGACTATTGCATATCCTCACCCACACCAACTATT...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCGTGTGGGTGAGGATATaGAATAGTCTTATTAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RQSLELRQKDGPSRDCHIVWVRI*NSLIRR Trigger: CCTCCTAATAAGACTATTGCATATCCTCACCCACAC...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCCACAAAAACTTTATATaGCCCAGTACAGGGGAACGC | + |
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Preference number: 2 (lower is better) Translates to: SSFSSSFFFLLFSALITPHKNFI*PSTGER Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTTTGTG...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCTGGAAGCCTTTGTGTTaGGAGTTCTTTACCACAACC | + |
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Preference number: 2 (lower is better) Translates to: SSFSSSFFFLLFSALITPWKPLC*EFFTTT Trigger: GGTTGTGGTAAAGAACTCCCAACACAAAGGCTTCCA...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CAA 90 bp | AGAATTGGAAACAATTACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATC | + |
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Preference number: 2 (lower is better) Translates to: RIGNNYPWKELQRQS*ELRQKDGPSRDCHI Trigger: GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTAATTGTTTCCAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR TCA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCTACGAATACTACGTATaGGTAGCAACTCAGGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: RQSLELRQKDGPSRDCHIYEYYV*VATQVK Trigger: TTTCACCTGAGTTGCTACTCATACGTAGTATTCGTA...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGATCCACAAAGTTCATTTaGACAGTTATGGCACATGTA | + |
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Preference number: 2 (lower is better) Translates to: SLELRQKDGPSRDCHIQRSTKFI*TVMAHV Trigger: TACATGTGCCATAACTGTGCAAATGAACTTTGTGGA...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAACACAAAAACTTTATATaGCCCAGTACAGGGGAACGC | + |
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Preference number: 2 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKHKNFI*PSTGER Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTTTGTG...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CAA 90 bp | AGAAGAAGGAAGACCAAAGTATGGACACTTTGCCCCTTCTTAGAATaGGAAACAATTACCCATGGAAGGAGTTACAGAGACAAAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RRRKTKVWTLCPFLE*ETITHGRSYRDKVW Trigger: CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTAATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCATACTTTGGTCTTCCTTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCTCCACAAAGTTCATTTaGACAGTTATGGCACATGTA | + |
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Preference number: 2 (lower is better) Translates to: SSFSSSFFFLLFSALITPSTKFI*TVMAHV Trigger: TACATGTGCCATAACTGTGCAAATGAACTTTGTGGA...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAACCCTCAACAGAGGAATaGATACAAAAAGTGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKPSTEE*IQKVVH Trigger: ATGTACCACTTTTTGTATCCATTCCTCTGTTGAGGG...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CAA 90 bp | TCAAATGCACAGTCACTTGAATTAATGAAGTCTGCACTAATTATCTaGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCAT | + |
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Preference number: 2 (lower is better) Translates to: SNAQSLELMKSALII*EGFQPSEKAEGNDH Trigger: ATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGATAATTAGTGCAGACTTCATTAATTCAAGTGACTGTGCATTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAATACAGAATCCAGCTTTaGCTAATGTCACTTATAGAT | + |
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Preference number: 2 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKYRIQL*LMSLID Trigger: ATCTATAAGTGACATTAGGCAAAGCTGGATTCTGTA...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CAA 90 bp | TCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTaGGACCTGAAGTGCATCATCCTGAGTGAGGTAACACAATCACAA | + |
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Preference number: 2 (lower is better) Translates to: SAIKKNEFMKFLGKW*DLKCIILSEVTQSQ Trigger: TTGTGATTGTGTTACCTCACTCAGGATGATGCACTTCAGGTCCAACCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR GCA 72 bp | TCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTaGCTCAGGGTGCAGATTTTCTCAGGTCTGGACTGT | + |
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Preference number: 3 (lower is better) Translates to: SWLASGLQVSVT*LRVQIFSGLDC Trigger: ACAGTCCAGACCTGAGAAAATCTGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR GCA 72 bp | GAGACTATGCCGGTGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ETMPVPSKHRSG*SQSAIGWITGP Trigger: GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCACCGGCATAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CCA 72 bp | GGAGCTCTTGGCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GALGSSCICIKR*PSRPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGCCAAGAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 72 bp | TTGCCTCAGGGTGCAGATTTTCTCAGGTCTGGACTGTaGCCTAGAATGTGTTCTAGAGGCCAGGTAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LPQGADFLRSGL*PRMCSRGQVER Trigger: TCTCTCTACCTGGCCTCTAGAACACATTCTAGGTCACAGTCCAGACCTGAGAAAATCTGCACCCTGAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR CCA 72 bp | AGTAGCAACTCAGGTGAAAACTCTCCTCCATCCAGCTaGGGAGGAGGCTTATCTTACCTCTCTTCTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: SSNSGENSPPSS*GGGLSYLSSSM Trigger: CATGGAAGAAGAGAGGTAAGATAAGCCTCCTCCCCAGCTGGATGGAGGAGAGTTTTCACCTGAGTTGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGGCAAGTGTCAGTCACTaGCCTCAGGGTGCAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: HWKERPIGHKNFICPSTGASVSH*PQGADF Trigger: AAAATCTGCACCCTGAGGCAAGTGACTGACACTTGC...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 72 bp | AGACATGTATGGACCAAAGTGACCTGTCAGCTGCAGTaGAGCGAGTTTTCAGTCATGGAAGCCTTTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: RHVWTKVTCQLQ*SEFSVMEAFVL Trigger: CAACACAAAGGCTTCCATGACTGAAAACTCGCTTCACTGCAGCTGACAGGTCACTTTGGTCCATACATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAATGGAAGCCTTTGTGTaGGGAGTTCTTTACCACAAC | + |
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Preference number: 3 (lower is better) Translates to: SLELRQKDGPSRDCHIQRMEAFV*GVLYHN Trigger: GTTGTGGTAAAGAACTCCCAACACAAAGGCTTCCAT...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATA | + |
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Preference number: 3 (lower is better) Translates to: THGRSYRDKVWS*DKRMDHLETAI Trigger: TATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCATGGAAGCCTTTGTGTaGGGAGTTCTTTACCACAAC | + |
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Preference number: 3 (lower is better) Translates to: RQSLELRQKDGPSRDCHIMEAFV*GVLYHN Trigger: GTTGTGGTAAAGAACTCCCAACACAAAGGCTTCCAT...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAAGCAAGTGTCAGTCACTaGCCTCAGGGTGCAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKASVSH*PQGADF Trigger: AAAATCTGCACCCTGAGGCAAGTGACTGACACTTGC...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 72 bp | GTAACTAAGTTGTGTATAGACATGTATGGACCAAAGTaGCCTGTCAGCTGCAGTGAAGCGAGTTTTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: VTKLCIDMYGPK*PVSCSEASFQS Trigger: TGACTGAAAACTCGCTTCACTGCAGCTGACAGGTCACTTTGGTCCATACATGTCTATACACAACTTAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| 3UTR TCA 72 bp | GCTTGTTCCTTTGATTATCACTACGAATACTACGTATaGGTAGCAACTCAGGTGAAAACTCTCCTCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: ACSFDYHYEYYV*VATQVKTLLHP Trigger: TGGATGGAGGAGAGTTTTCACCTGAGTTGCTACTCATACGTAGTATTCGTAGTGATAATCAAAGGAACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCGTTAGTTCATTTTTGTaGAGCACCATCCACAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RQSLELRQKDGPSRDCHIVSSFL*STIHKV Trigger: AACTTTGTGGATGGTGCTCAACAAAAATGAACTAAC...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAATGCCCCTTCTTAGAATaGGAAACAATTACCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKCPFLE*ETITHG Trigger: TCCATGGGTAATTGTTTCCAATTCTAAGAAGGGGCA...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCCTGAAGTCGTCATTCTaGTATGTTTGTTACCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSFSSSFFFLLFSALITPLKSSF*YVCYQV Trigger: TACTTGGTAACAAACATACAAGAATGACGACTTCAG...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR GCA 72 bp | ACTAGGATGACTGTGGTATGGTACAGAATCCAGCTTTaGCTAATGTCACTTATAGATAGTACCACAGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TRMTVVWYRIQL*LMSLIDSTTVD Trigger: ATCTACTGTGGTACTATCTATAAGTGACATTAGGCAAAGCTGGATTCTGTACCATACCACAGTCATCCTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CCA 72 bp | ATTAACAAACATGGCCTCACTAGGATGACTGTGGTATaGTACAGAATCCAGCTTTGCCTAATGTCACTTATA | + |
|
Preference number: 3 (lower is better) Translates to: INKHGLTRMTVV*YRIQLCLMSLI Trigger: TATAAGTGACATTAGGCAAAGCTGGATTCTGTACCATACCACAGTCATCCTAGTGAGGCCATGTTTGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAAGTAAGTCAAATCTTGTaGAAGATTCCTTCTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKVSQIL*KIPSLI Trigger: GATGAGAGAAGGAATCTTCAACAAGATTTGACTTAC...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAAGTTAGTTCATTTTTGTaGAGCACCATCCACAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKVSSFL*STIHKV Trigger: AACTTTGTGGATGGTGCTCAACAAAAATGAACTAAC...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR TCA 72 bp | CAATTTCAAAGTCTCAGTGGAAATAGTTGGTGTGGGTaGGGATATGCAATAGTCTTATTAGGAGGTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QFQSLSGNSWCG*GYAIVLLGGKE Trigger: TTCTTTACCTCCTAATAAGACTATTGCATATCCTCACCCACACCAACTATTTCCACTGAGACTTTGAAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCATCCAGCTGGGGAGGAGGCTTATCTTACCTCTCTTCTTCCATGTAGTGCGAGCCAACAGGATTaGCAGGGGCAGATGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLHPAGEEAYLTSLLPCSASQQD*QGQMET Trigger: AGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGC...ACTACATGGAAGAAGAGAGGTAAGATAAGCCTCCTCCCCAGCTGGATGGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCAAACTGGGTTCATCAGTaGAGGGAGCAGGAAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFMACLGSASVSHLPQGANWVHQ*REQEVD Trigger: GTCCACTTCCTGCTCCCTCCACTGATGAACCCAGTT...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | TTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTaGCCTCAGGGTGCAGATTTTCTCAGGTCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FMACLGSASVSH*PQGADFLRSGL Trigger: CAGTCCAGACCTGAGAAAATCTGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCAGAGGAAGAAGTACATTaGTCGATGCAATGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFMACLGSASVSHLPQGAEEEVH*SMQCGL Trigger: GAGCCCACATTGCATCGACCAATGTACTTCTTCCTC...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAAGTGATGAGAGGCACTaGCCACCAGGATGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLELRQKDGPSRDCHIQRSDERH*PPGWCS Trigger: GCTGCACCATCCTGGTGGTCAGTGCCTCTCATCACT...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGTGGGCTCCAGGGCAATaGTCCAGAGGATTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HWKERPIGHKNFICPSTGWAPGQ*SRGLYH Trigger: ATGGTACAATCCTCTGGATCATTGCCCTGGAGCCCA...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGAGCAGGCGGAGGGAGTaGCAGCTTGAATCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HWKERPIGHKNFICPSTGSRRRE*QLESVN Trigger: ATTGACAGATTCAAGCTGCCACTCCCTCCGCCTGCT...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCAGCACAGCAGAGAGGTaGGCAGCACACGTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPSTAER*AAHVCP Trigger: TGGGCAAACGTGTGCTGCTCACCTCTCTGCTGTGCT...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCATCCAGCTGGGGAGGAGGCTTATCTTACCTCTCTTCTTCCATGTAGTAGAGGATTGTACCATTaGCAAAGGCAGAGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHPAGEEAYLTSLLPCSRGLYH*QRQREG Trigger: ACCTTCTCTCTGCCTTTGGCAATGGTACAATCCTCT...ACTACATGGAAGAAGAGAGGTAAGATAAGCCTCCTCCCCAGCTGGATGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAAGCAGGCGGAGGGAGTaGCAGCTTGAATCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLELRQKDGPSRDCHIQRSRRRE*QLESVN Trigger: ATTGACAGATTCAAGCTGCCACTCCCTCCGCCTGCT...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGAAACTGGGTTCATCAGTaGAGGGAGCAGGAAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLELRQKDGPSRDCHIQRNWVHQ*REQEVD Trigger: GTCCACTTCCTGCTCCCTCCACTGATGAACCCAGTT...TCTCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAAAGCACAGCAGAGAGGTaGGCAGCACACGTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKSTAER*AAHVCP Trigger: TGGGCAAACGTGTGCTGCTCACCTCTCTGCTGTGCT...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCATTGGTGAGGATCACTaGGTAGTGGAGAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPIGEDH*VVERAA Trigger: TGCCGCCCTCTCCACTACCCAGTGATCCTCACCAAT...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGAGGGATTTCAGCCATCAGAAAAAGCAGAAGGGAATGATCATCAGAAAGCGAGCCAACAGGATTaGCAGGGGCAGATGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILEGFQPSEKAEGNDHQKASQQD*QGQMET Trigger: AGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGC...TTTCTGATGATCATTCCCTTCTGCTTTTTCTGATGGCTGAAATCCCTCCAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | AGTTATAGAATTAACAAACATGGCCTCACTAGGATGACTGTGGTATGGTACAGAAGTGATGAGAGGCACTaGCCACCAGGATGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYRINKHGLTRMTVVWYRSDERH*PPGWCS Trigger: GCTGCACCATCCTGGTGGTCAGTGCCTCTCATCACT...TCTGTACCATACCACAGTCATCCTAGTGAGGCCATGTTTGTTAATTCTATAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCTGGGCTCCAGGGCAATaGTCCAGAGGATTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPWAPGQ*SRGLYH Trigger: ATGGTACAATCCTCTGGATCATTGCCCTGGAGCCCA...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCATTGGCAGGGGCAGATaGAGACTCAAGCATCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQSLELRQKDGPSRDCHIIGRGR*RLKHRK Trigger: TTTCCGATGCTTGAGTCTCCATCTGCCCCTGCCAAT...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCGAGGAAGAAGTACATTaGTCGATGCAATGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSLELRQKDGPSRDCHIEEEVH*SMQCGL Trigger: GAGCCCACATTGCATCGACCAATGTACTTCTTCCTC...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | AGTTATAGAATTAACAAACATGGCCTCACTAGGATGACTGTGGTATGGTACAGAATTGGTGAGGATCACTaGGTAGTGGAGAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYRINKHGLTRMTVVWYRIGEDH*VVERAA Trigger: TGCCGCCCTCTCCACTACCCAGTGATCCTCACCAAT...TCTGTACCATACCACAGTCATCCTAGTGAGGCCATGTTTGTTAATTCTATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCGGGCCATTAATGAGCTaGTGTTTGAGGTATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPGPLMS*CLRYLG Trigger: CCCAAGATACCTCAAACATCAGCTCATTAATGGCCC...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCAGAGGATTGTACCATTaGCAAAGGCAGAGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPRGLYH*QRQREG Trigger: ACCTTCTCTCTGCCTTTGGCAATGGTACAATCCTCT...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCGTGCCAAGAGAATCATaGGTATGTAGAAGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSSSFFFLLFSALITPVPRES*VCRREA Trigger: TGCTTCTCTTCTACATACCCATGATTCTCTTGGCAC...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | AAGACCAAAGTATGGACACTTTGCCCCTTCTTAGAATaGGAAACAATTACCCATGGAAGGAGTTACAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTKVWTLCPFLE*ETITHGRSYRD Trigger: GTCTCTGTAACTCCTTCCATGGGTAATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCATACTTTGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | AAACTGAAGAAGAAGGAAGACCAAAGTATGGACACTTaGCCCCTTCTTAGAATTGGAAACAATTACCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKKEDQSMDT*PLLRIGNNYPW Trigger: CCATGGGTAATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCATACTTTGGTCTTCCTTCTTCTTCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTaGGACCTGAAGTGCATCATCCTGAGTGAGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KKNEFMKFLGKW*DLKCIILSEVT Trigger: TGTTACCTCACTCAGGATGATGCACTTCAGGTCCAACCATTTGCCTAGGAATTTCATAAATTCATTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | CTGCAAGTATTCCATGATTGTCTGAAGTCGTCATTCTaGTATGTTTGTTACCAAGTATGTTCTCTAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQVFHDCLKSSF*YVCYQVCSLRK Trigger: TTTCCTTAGAGAACATACTTGGTAACAAACATACAAGAATGACGACTTCAGACAATCATGGAATACTTGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| 3UTR CAA 72 bp | TTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTaGATCACTCCCTTATTCTTCTCTATATCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSSSFFFLLFSA*ITPLFFSISAF Trigger: AAAAGCTGATATAGAGAAGAATAAGGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS CCA 90 bp | GCGAGCCATATCTGGGTGCAGGCAGTAAGAATGTGTCAGGACCTGTaGACGGCAATATGGCATGCGAGCCAACAGGATTGGCAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASHIWVQAVRMCQDL*TAIWHASQQDWQGQ Trigger: CTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTTACTGCCTGCACCCAGATATGGCTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS GCA 90 bp | TTGCCCAGCCTTCCAGCGGTCCTCAGCAGATCCCACACCTTGCAGTaGTCTCCCAATCAGCCCATAGGAGAAGAAAATCAGCAGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSLPAVLSRSHTLQ*SPNQPIGEENQQRV Trigger: GACCCTCTGCTGATTTTCTTCTCCTATGGGCTGATTGGGAGAGCACTGCAAGGTGTGGGATCTGCTGAGGACCGCTGGAAGGCTGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS GCA 90 bp | GCAGGCAGTAAGAATGTGTCAGGACCTGTGGACGGCAATATGGCATaGGAGCCAACAGGATTGGCAGGGGCAGATGGAGACTCAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AGSKNVSGPVDGNMA*EPTGLAGADGDSSI Trigger: GATGCTTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTTACTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS CCA 90 bp | TGGGTGCAGGCAGTAAGAATGTGTCAGGACCTGTGGACGGCAATATaGCATGCGAGCCAACAGGATTGGCAGGGGCAGATGGAGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WVQAVRMCQDLWTAI*HASQQDWQGQMETQ Trigger: TTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTTACTGCCTGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS CCA 90 bp | GGACGGCAATATGGCATGCGAGCCAACAGGATTGGCAGGGGCAGATaGAGACTCAAGCATCGGAAAGCAATGGCTACGGCAATCTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GRQYGMRANRIGRGR*RLKHRKAMATAILL Trigger: TAGCAAGATTGCCGTAGCCATTGCTTTCCGATGCTTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTCATGGCTTGCCTCGGGTCTGCAAGTGTCAGTCACTTGCCTCAGGGTGCAAGAGGAAGAAGTACATaGGTCGATGCAATGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFMACLGSASVSHLPQGARGRST*VDAMWA Trigger: AGCCCACATTGCATCGACCAATGTACTTCTTCCTCT...TGCACCCTGAGGCAAGTGACTGACACTTGCAGACCCGAGGCAAGCCATGAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCGTGAGCAGCACACGTTaGCCCAGCCTTCCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQSLELRQKDGPSRDCHIVSSTR*PSLPAV Trigger: GACCGCTGGAAGGCTGGGCAAACGTGTGCTGCTCAC...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCTGCGAGCCAACAGGATaGGCAGGGGCAGATGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RQSLELRQKDGPSRDCHICEPTG*AGADGD Trigger: GTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCA...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
||
| CDS-3UTR CAA 90 bp | AGTTATAGAATTAACAAACATGGCCTCACTAGGATGACTGTGGTATGGTACAGAGTGAGCAGCACACGTTaGCCCAGCCTTCCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SYRINKHGLTRMTVVWYRVSSTR*PSLPAV Trigger: GACCGCTGGAAGGCTGGGCAAACGTGTGCTGCTCAC...TCTGTACCATACCACAGTCATCCTAGTGAGGCCATGTTTGTTAATTCTATAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCGGAGGGAGTGGCAGCTaGAATCTGTCAATGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: RQSLELRQKDGPSRDCHIGGSGS*NLSMSA Trigger: GGCACTCATTGACAGATTCAAGCTGCCACTCCCTCC...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS-3UTR CAA 90 bp | CACTGGAAAGAGAGGCCCATTGGACACAAAAACTTTATATGCCCCAGTACAGGGAGAGGAAGAAGTACATaGGTCGATGCAATGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: HWKERPIGHKNFICPSTGRGRST*VDAMWA Trigger: AGCCCACATTGCATCGACCAATGTACTTCTTCCTCT...CCCTGTACTGGGGCATATAAAGTTTTTGTGTCCAATGGGCCTCTCTTTCCAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS-3UTR CAA 90 bp | AGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGGATTGTACCATaGCCAAAGGCAGAGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RQSLELRQKDGPSRDCHIQRIVP*PKAERR Trigger: CCTTCTCTCTGCCTTTGGCAATGGTACAATCCTCTG...GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS-3UTR CAA 90 bp | TCCTCCTTCTCTTCTTCTTTCTTTTTCTTGCTCTTTTCAGCCTTGATCACTCCCCAGAGGATTGTACCATaGCCAAAGGCAGAGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SSFSSSFFFLLFSALITPQRIVP*PKAERR Trigger: CCTTCTCTCTGCCTTTGGCAATGGTACAATCCTCTG...GGGAGTGATCAAGGCTGAAAAGAGCAAGAAAAAGAAAGAAGAAGAGAAGGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS-3UTR CAA 90 bp | AGTTATAGAATTAACAAACATGGCCTCACTAGGATGACTGTGGTATGGTACAGAGGAGGGAGTGGCAGCTaGAATCTGTCAATGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SYRINKHGLTRMTVVWYRGGSGS*NLSMSA Trigger: GGCACTCATTGACAGATTCAAGCTGCCACTCCCTCC...TCTGTACCATACCACAGTCATCCTAGTGAGGCCATGTTTGTTAATTCTATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CCA 72 bp | CTGTGGACGGCAATATGGCATGCGAGCCAACAGGATTaGCAGGGGCAGATGGAGACTCAAGCATCGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LWTAIWHASQQD*QGQMETQASES Trigger: GCTTTCCGATGCTTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CAA 72 bp | CCTGTGGACGGCAATATGGCATGCGAGCCAACAGGATaGGCAGGGGCAGATGGAGACTCAAGCATCGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PVDGNMACEPTG*AGADGDSSIGK Trigger: CTTTCCGATGCTTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CAA 90 bp | ACACGTTTGCCCAGCCTTCCAGCGGTCCTCAGCAGATCCCACACCTaGCAGTGCTCTCCCAATCAGCCCATAGGAGAAGAAAATCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TRLPSLPAVLSRSHT*QCSPNQPIGEENQQ Trigger: CTGCTGATTTTCTTCTCCTATGGGCTGATTGGGAGAGCACTGCAAGGTGTGGGATCTGCTGAGGACCGCTGGAAGGCTGGGCAAACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS GCA 72 bp | AAGAATGTGTCAGGACCTGTGGACGGCAATATGGCATaGGAGCCAACAGGATTGGCAGGGGCAGATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: KNVSGPVDGNMA*EPTGLAGADGD Trigger: GTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CCA 72 bp | TATGGCATGCGAGCCAACAGGATTGGCAGGGGCAGATaGAGACTCAAGCATCGGAAAGCAATGGCTACGGCA | + |
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Preference number: 6 (lower is better) Translates to: YGMRANRIGRGR*RLKHRKAMATA Trigger: TGCCGTAGCCATTGCTTTCCGATGCTTGAGTCTCCATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CCA 72 bp | GCAGTAAGAATGTGTCAGGACCTGTGGACGGCAATATaGCATGCGAGCCAACAGGATTGGCAGGGGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: AVRMCQDLWTAI*HASQQDWQGQM Trigger: CATCTGCCCCTGCCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTTACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS GCA 72 bp | CTTCCAGCGGTCCTCAGCAGATCCCACACCTTGCAGTaGTCTCCCAATCAGCCCATAGGAGAAGAAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: LPAVLSRSHTLQ*SPNQPIGEENQ Trigger: CTGATTTTCTTCTCCTATGGGCTGATTGGGAGAGCACTGCAAGGTGTGGGATCTGCTGAGGACCGCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CCA 72 bp | ATCTGGGTGCAGGCAGTAAGAATGTGTCAGGACCTGTaGACGGCAATATGGCATGCGAGCCAACAGGATTGG | + |
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Preference number: 6 (lower is better) Translates to: IWVQAVRMCQDL*TAIWHASQQDW Trigger: CCAATCCTGTTGGCTCGCATGCCATATTGCCGTCCACAGGTCCTGACACATTCTTACTGCCTGCACCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CAA 90 bp | CAATCAGCCCATAGGAGAAGAAAATCAGCAGAGGGTCTAGTACCATaGCTGACAGTACCACAACCAGGCTGTAGACCGCACCCCATGCTT | + |
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Preference number: 6 (lower is better) Translates to: QSAHRRRKSAEGLVP*LTVPQPGCRPHPML Trigger: AAGCATGGGGTGCGGTCTACAGCCTGGTTGTGGTACTGTCAGCAATGGTACTAGACCCTCTGCTGATTTTCTTCTCCTATGGGCTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS TCA 72 bp | AGTACATTGGTCGATGCAATGTGGGCTCCAGGGCAATaGTCCAGAGGATTGTACCATTGCCAAAGGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: STLVDAMWAPGQ*SRGLYHCQRQR Trigger: TCTCTGCCTTTGGCAATGGTACAATCCTCTGGATCATTGCCCTGGAGCCCACATTGCATCGACCAATGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CAA 72 bp | CATAGGAGAAGAAAATCAGCAGAGGGTCTAGTACCATaGCTGACAGTACCACAACCAGGCTGTAGACCGCAC | + |
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Preference number: 6 (lower is better) Translates to: HRRRKSAEGLVP*LTVPQPGCRPH Trigger: GTGCGGTCTACAGCCTGGTTGTGGTACTGTCAGCAATGGTACTAGACCCTCTGCTGATTTTCTTCTCCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS TCA 72 bp | GGCCCACTAATAGAAAAGTGGGGGCCATTAATGAGCTaGTGTTTGAGGTATCTTGGGCGGACAATGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: GPLIEKWGPLMS*CLRYLGRTMVT Trigger: TGTCACCATTGTCCGCCCAAGATACCTCAAACATCAGCTCATTAATGGCCCCCACTTTTCTATTAGTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS GCA 72 bp | ACACTAAGCAAGAAGAGGAAGAAGTACATTGGTCGATaGAATGTGGGCTCCAGGGCAATGATCCAGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: TLSKKRKKYIGR*NVGSRAMIQRI Trigger: AATCCTCTGGATCATTGCCCTGGAGCCCACATTGCATCGACCAATGTACTTCTTCCTCTTCTTGCTTAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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| CDS CCA 72 bp | TTCTCTAATCTCCTTCATCTTGACACTGTAGAGAACTaGGTTCATCAGTGGAGGGAGCAGGAAGTGGACATA | + |
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Preference number: 6 (lower is better) Translates to: FSNLLHLDTVEN*VHQWREQEVDI Trigger: TATGTCCACTTCCTGCTCCCTCCACTGATGAACCCAGTTCTCTACAGTGTCAAGATGAAGGAGATTAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061738.4 ENSMUST00000214160.2 ENSMUST00000215773.2 |
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