Pregenerated sensors for OLFR57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060205Ensembl transcript IDs: ENSMUST00000203906.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCATATCAATAGACTGCAGTaGATAACCCAAACCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: EVQSIITKVGTWQHPSRHINRLQ*ITQTIN Trigger: GTTAATGGTTTGGGTTATCCACTGCAGTCTATTGAT...ATGCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| 3UTR CCA 72 bp | ATGACCAAGGGAAGTCTTATAATGATAACATTTAATTaGGGCTGGCTTATAGGTTCAGAGGTTCAGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: MTKGSLIMITFN*GWLIGSEVQSI Trigger: AATGGACTGAACCTCTGAACCTATAAGCCAGCCCCAATTAAATGTTATCATTATAAGACTTCCCTTGGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCCACAGTGTACATCAATaGAGCTGTTGCAGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QRFSPLSPRWEHGSIQVGHSVHQ*SCCSSM Trigger: CATGCTACTGCAACAGCTTCATTGATGTACACTGTG...GCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | GAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCATGCCTTGCTTTGTGTGTaGATGTTTACCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVQSIITKVGTWQHPSRHALLCV*MFTSIC Trigger: ACAGATGCTGGTAAACATTCACACACAAAGCAAGGC...ATGCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCCAGAAGAAAGAATTCTaGAAGCTGAGTGTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRFSPLSPRWEHGSIQVGQKKEF*KLSVIS Trigger: GGAAATGACACTCAGCTTTCAGAATTCTTTCTTCTG...GCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR CCA 90 bp | CAAGTAGGCATGATTAAGGAGGTGTTGAGAGTTCTACATCTTCATCTGAAGGCTATGGGTGTGTGCAGGTaGGAGTCAACAATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVGMIKEVLRVLHLHLKAMGVCR*ESTMMA Trigger: GGCCATCATTGTTGACTCCCACCTGCACACACCCAT...AGCCTTCAGATGAAGATGTAGAACTCTCAACACCTCCTTAATCATGCCTACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | GAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCATAAGAATTCTGAAAGCTaGGTGTCATTTCCTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EVQSIITKVGTWQHPSRHKNSES*VSFPVS Trigger: GGAAACAGGAAATGACACTCAGCTTTCAGAATTCTT...ATGCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCTTGAGGTTGATTCTCTaGAAATCCCAGAAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFSPLSPRWEHGSIQVGLRLIL*KSQKKE Trigger: TTCTTTCTTCTGGGATTTTCAGAGAATCAACCTCAA...GCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | ATCCAAGTAGGCATGATTAAGGAGGTGTTGAGAGTTCTACATCTTCATCTGAAGGAACAGTGGTGGAAGTaGAGCAGATGTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQVGMIKEVLRVLHLHLKEQWWK*SRCPQR Trigger: CCTTTGTGGACATCTGCTTCACTTCCACCACTGTTC...CTTCAGATGAAGATGTAGAACTCTCAACACCTCCTTAATCATGCCTACTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR TCA 90 bp | CAAGTAGGCATGATTAAGGAGGTGTTGAGAGTTCTACATCTTCATCTGAAGGCTGGAACAGTCCAAATATaGCAGGCTGAATTTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QVGMIKEVLRVLHLHLKAGTVQI*QAEFEV Trigger: AACCTCAAATTCAGCCTGTCATATTTGGACTGTTCC...AGCCTTCAGATGAAGATGTAGAACTCTCAACACCTCCTTAATCATGCCTACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR GCA 90 bp | ATCCAAGTAGGCATGATTAAGGAGGTGTTGAGAGTTCTACATCTTCATCTGAAGACACTCCCAGGAGGGTaGAATAAAATAAGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: IQVGMIKEVLRVLHLHLKTLPGG*NKIRRQ Trigger: TTGTCTCCTTATTTTATTGCACCCTCCTGGGAGTGT...CTTCAGATGAAGATGTAGAACTCTCAACACCTCCTTAATCATGCCTACTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR CAA 90 bp | CAGAGGTTCAGTCCATTATCACCAAGGTGGGAACATGGCAGCATCCAAGTAGGCGGTGATGGCCTTGCTTaGTGTGTGAATGTTTACCAG | + |
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Preference number: 5 (lower is better) Translates to: QRFSPLSPRWEHGSIQVGGDGLA*CVNVYQ Trigger: CTGGTAAACATTCACACACAAAGCAAGGCCATCACC...GCCTACTTGGATGCTGCCATGTTCCCACCTTGGTGATAATGGACTGAACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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| CDS-3UTR CAA 90 bp | GAGGTGTTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAGCAGAATACTGGCTGGCCTGGTGTACAACTaGATTAAGTTCACAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: EVLRVLHLHLKAASRILAGLVYN*IKFTEK Trigger: TTTTTCTGTGAACTTAATCAAGTTGTACACCAGGCC...AGCCAGTATTCTGCTAGCAGCCTTCAGATGAAGATGTAGAACTCTCAACACCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203906.3 |
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