Pregenerated sensors for OLFR569 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062142Ensembl transcript IDs: ENSMUST00000078191.3, ENSMUST00000217024.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGGCACGCAATGGCTGAGACTGGGAGCTCAATTCCAAGACAGTaGCTGTCACTTTGTTTCTGGAGACAGCTCTATCATCTCTACATC | + |
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Preference number: 1 (lower is better) Translates to: RWHAMAETGSSIPRQ*LSLCFWRQLYHLYI Trigger: GATGTAGAGATGATAGAGCTGTCTCCAGAAACAAAGTGACAGCCACTGTCTTGGAATTGAGCTCCCAGTCTCAGCCATTGCGTGCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CCA 90 bp | GAAGTCCAGAATGGCTCCCTACAGTCTGGGTTTGGTGGTTGTTTATaGGATGAATTTCCAGGTGGGGCAGTCTCTGAATGGTCATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: EVQNGSLQSGFGGCL*DEFPGGAVSEWSFL Trigger: AAGGAATGACCATTCAGAGACTGCCCCACCTGGAAATTCATCCCATAAACAACCACCAAACCCAGACTGTAGGGAGCCATTCTGGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR GCA 90 bp | AGTTTTCCAGATCTTTTACCAGATCCAAAGACTGCACCCTTCCCTTaGATACATAGCTCTATAAACCTCCTGCCTATTATCCACTTGATG | + |
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Preference number: 1 (lower is better) Translates to: SFPDLLPDPKTAPFP*IHSSINLLPIIHLM Trigger: CATCAAGTGGATAATAGGCAGGAGGTTTATAGAGCTATGTATGCAAGGGAAGGGTGCAGTCTTTGGATCTGGTAAAAGATCTGGAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR GCA 90 bp | AATTTCCAGGTGGGGCAGTCTCTGAATGGTCATTCCTTCAGTCTCTaGTCCGAATTTTGTCTCTATGTTCATCTCACATTTAGATATGTT | + |
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Preference number: 1 (lower is better) Translates to: NFQVGQSLNGHSFSL*SEFCLYVHLTFRYV Trigger: AACATATCTAAATGTGAGATGAACATAGAGACAAAATTCGGAGCAGAGACTGAAGGAATGACCATTCAGAGACTGCCCCACCTGGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 90 bp | ATCCTGCTGACCAGGAAGTCCAGAATGGCTCCCTACAGTCTGGGTTaGGTGGTTGTTTATGGGATGAATTTCCAGGTGGGGCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ILLTRKSRMAPYSLG*VVVYGMNFQVGQSL Trigger: CAGAGACTGCCCCACCTGGAAATTCATCCCATAAACAACCACCAAACCCAGACTGTAGGGAGCCATTCTGGACTTCCTGGTCAGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR TCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGCCAAGGGAACATAAATaGCTAAATGAGCCAAAGATC | + |
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Preference number: 2 (lower is better) Translates to: HTPPITTGHITSPGRLAQPREHK*LNEPKI Trigger: GATCTTTGGCTCATTTAGTCATTTATGTTCCCTTGG...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGAAACCCCTGTATGCCTaGTCTTCAGTCTTTATCAGT | + |
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Preference number: 2 (lower is better) Translates to: DIKMVRMSHLITRGGTQWKPLYA*SSVFIS Trigger: ACTGATAAAGACTGAAGACCAGGCATACAGGGGTTT...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGCTGTCACTTTGTTTCTaGAGACAGCTCTATCATCTC | + |
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Preference number: 2 (lower is better) Translates to: DIKMVRMSHLITRGGTQWLSLCF*RQLYHL Trigger: GAGATGATAGAGCTGTCTCCAGAAACAAAGTGACAG...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGGTTGAATATGTCCTTTaGTCATTTACCTGGAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: DIKMVRMSHLITRGGTQWVEYVL*SFTWSY Trigger: GTAGCTCCAGGTAAATGACCAAAGGACATATTCAAC...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGATGCGTACTTCCATATaGCCATTAATAACATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DIKMVRMSHLITRGGTQWMRTSI*PLITFP Trigger: AGGGAATGTTATTAATGGCCATATGGAAGTACGCAT...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCACTGCACCCTTCCCTTaGATACATAGCTCTATAAAC | + |
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Preference number: 2 (lower is better) Translates to: WRQLYHLYINAEYTNRTITAPFP*IHSSIN Trigger: GTTTATAGAGCTATGTATGCAAGGGAAGGGTGCAGT...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGAGTGCAGTGATCCAATaGGAAGCATACTTTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: DIKMVRMSHLITRGGTQWSAVIQ*EAYFKN Trigger: ATTTTTAAAGTATGCTTCCCATTGGATCACTGCACT...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCAATGACTCCCATTTCTaGGTGCCTCTAAATTTCATC | + |
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Preference number: 2 (lower is better) Translates to: WRQLYHLYINAEYTNRTINDSHF*VPLNFI Trigger: GATGAAATTTAGAGGCACTCAGAAATGGGAGTCATT...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCAACATTCCCTTGTATTaGCCAAAGCTTTTCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: WRQLYHLYINAEYTNRTINIPLY*PKLFLY Trigger: GTAGAGGAAAAGCTTTGGCCAATACAAGGGAATGTT...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCACTCTCAGTAATGTTTaGCTATCAAAATCTGATGCA | + |
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Preference number: 2 (lower is better) Translates to: WRQLYHLYINAEYTNRTITLSNV*LSKSDA Trigger: TGCATCAGATTTTGATAGGCAAACATTACTGAGAGT...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 90 bp | TCCTACAATGATGCGTACTTCCATATGGCCATTAATAACATTCCCTaGTATTGGCCAAAGCTTTTCCTCTACATATATTCTTGGTTTATG | + |
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Preference number: 2 (lower is better) Translates to: SYNDAYFHMAINNIP*YWPKLFLYIYSWFM Trigger: CATAAACCAAGAATATATGTAGAGGAAAAGCTTTGGCCAATACAAGGGAATGTTATTAATGGCCATATGGAAGTACGCATCATTGTAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATCTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACCTTTTCCATAGTCTTTaGCACCAACCTCTTTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: FHLQLLLKTTVCSPETFYLFHSL*HQPLLY Trigger: ATACAAAAGAGGTTGGTGCCAAAGACTATGGAAAAG...GTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAGATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR TCA 72 bp | GGCTTGTTTACTACCTGGAACAGACTTCCATCCTGCTaGCCAGGAAGTCCAGAATGGCTCCCTACAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: GLFTTWNRLPSC*PGSPEWLPTVW Trigger: CCAGACTGTAGGGAGCCATTCTGGACTTCCTGGTCAGCAGGATGGAAGTCTGTTCCAGGTAGTAAACAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CCA 72 bp | GCAATGGCTGAGACTGGGAGCTCAATTCCAAGACAGTaGCTGTCACTTTGTTTCTGGAGACAGCTCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: AMAETGSSIPRQ*LSLCFWRQLYH Trigger: ATGATAGAGCTGTCTCCAGAAACAAAGTGACAGCCACTGTCTTGGAATTGAGCTCCCAGTCTCAGCCATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CCA 72 bp | TTATGGGATGAATTTCCAGGTGGGGCAGTCTCTGAATaGTCATTCCTTCAGTCTCTGCTCCGAATTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LWDEFPGGAVSE*SFLQSLLRILS Trigger: AGACAAAATTCGGAGCAGAGACTGAAGGAATGACCATTCAGAGACTGCCCCACCTGGAAATTCATCCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR GCA 72 bp | GTGGGGCAGTCTCTGAATGGTCATTCCTTCAGTCTCTaGTCCGAATTTTGTCTCTATGTTCATCTCACATTT | + |
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Preference number: 3 (lower is better) Translates to: VGQSLNGHSFSL*SEFCLYVHLTF Trigger: AAATGTGAGATGAACATAGAGACAAAATTCGGAGCAGAGACTGAAGGAATGACCATTCAGAGACTGCCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CCA 72 bp | AGCTCAATTCCAAGACAGTGGCTGTCACTTTGTTTCTaGAGACAGCTCTATCATCTCTACATCAACGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SSIPRQWLSLCF*RQLYHLYINAE Trigger: TTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCAGAAACAAAGTGACAGCCACTGTCTTGGAATTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCGCAGTCACCTGCTGCTaGTTTTACCTATTTCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: WRQLYHLYINAEYTNRTIAVTCC*FYLFPN Trigger: ATTGGGAAATAGGTAAAACAAGCAGCAGGTGACTGC...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCATCTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACTGGCACCAACCTCTTTaGTATGTTTTTGTTGACATT | + |
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Preference number: 3 (lower is better) Translates to: FHLQLLLKTTVCSPETFYWHQPL*YVFVDI Trigger: AATGTCAACAAAAACATACAAAAGAGGTTGGTGCCA...GTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAGATGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR TCA 72 bp | TATCTTGTAAATATGTGTTGGTTTGTCAAAGTTTGTTaGATATGTCCTTTGGTCATTTACCTGGAGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: YLVNMCWFVKVC*ICPLVIYLELL Trigger: CAGTAGCTCCAGGTAAATGACCAAAGGACATATTCAACAAACTTTGACAAACCAACACATATTTACAAGATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR GCA 72 bp | TTTGTAGTCCTGAAACATTCTACTCTCAGTAATGTTTaGCTATCAAAATCTGATGCAAATGACTTCCTAGTT | + |
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Preference number: 3 (lower is better) Translates to: FVVLKHSTLSNV*LSKSDANDFLV Trigger: AACTAGGAAGTCATTTGCATCAGATTTTGATAGGCAAACATTACTGAGAGTAGAATGTTTCAGGACTACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGACTCGTGGCACGTGGTaGCCAAAGCGGTGGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HTPPITTGHITSPGRLAQTRGTW*PKRWVR Trigger: CCTCACCCACCGCTTTGGCCACCACGTGCCACGAGT...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGACAACTCGTGGCACGTaGTGGCCAAAGCGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HTPPITTGHITSPGRLAQTTRGT*WPKRWV Trigger: CACCCACCGCTTTGGCCACCACGTGCCACGAGTTGT...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR GCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGCAGATGTGGTCAGGATaGTGGAATGTCGGAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HTPPITTGHITSPGRLAQQMWSG*WNVGVG Trigger: TCCCACTCCGACATTCCAGCATCCTGACCACATCTG...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | CAATCACCACAGGCCACATCACCTCACCAGGCAGGCTaGCTCAGCCAATCAGGAATTAAGGGCGGGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: QSPQATSPHQAG*LSQSGIKGGPS Trigger: GGATGGCCCGCCCTTAATTCCTGATTGGCTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR TCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGTTATGTATAGGATGGTaGTATTTCCAGTCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: HTPPITTGHITSPGRLAQLCIGW*YFQSVP Trigger: TGGCACTGACTGGAAATATCACCATCCTATACATAA...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | CACACCCCACCAATCACCACAGGCCACATCACCTCACCAGGCAGGCTTGCTCAGGAAGGTAAAAAGGGCTaGGATATAGAAAGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: HTPPITTGHITSPGRLAQEGKKG*DIESQN Trigger: ATTTTGGCTTTCTATATCCCAGCCCTTTTTACCTTC...CTGAGCAAGCCTGCCTGGTGAGGTGATGTGGCCTGTGGTGATTGGTGGGGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | ACCAGGAAGTCCAGAATGGCTCCCTACAGTCTGGGTTaGGTGGTTGTTTATGGGATGAATTTCCAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TRKSRMAPYSLG*VVVYGMNFQVG Trigger: CCCCACCTGGAAATTCATCCCATAAACAACCACCAAACCCAGACTGTAGGGAGCCATTCTGGACTTCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGGCTGGAATGTCGGAGTaGGAAGCAGATAGCCACATA | + |
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Preference number: 4 (lower is better) Translates to: DIKMVRMSHLITRGGTQWAGMSE*EADSHI Trigger: TATGTGGCTATCTGCTTCCCACTCCGACATTCCAGC...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR TCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCGGATTCCAAGCAACATaGAGAACAGGGGATGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: WRQLYHLYINAEYTNRTIGFQAT*RTGDGK Trigger: CTTCCCATCCCCTGTTCTTCATGTTGCTTGGAATCC...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR TCA 90 bp | CTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACTCTCAGATGTACCAAAAGCTTTaGGGCGAGCTTCACCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQLLLKTTVCSPETFYSQMYQKL*GELHLR Trigger: CCTCAGGTGAAGCTCGCCTCAAAGCTTTTGGTACAT...CTGAGAGTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | TGGAGACAGCTCTATCATCTCTACATCAACGCTGAATATACTAACAGAACCATCGGCTCATGCAGGGTGTaGTCAATTCGGATTATGTAT | + |
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Preference number: 4 (lower is better) Translates to: WRQLYHLYINAEYTNRTIGSCRV*SIRIMY Trigger: ATACATAATCCGAATTGACCACACCCTGCATGAGCC...GATGGTTCTGTTAGTATATTCAGCGTTGATGTAGAGATGATAGAGCTGTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | CTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACTCTCAGATGAAGAACAGGGGATaGGAAGAGCTGTTACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LQLLLKTTVCSPETFYSQMKNRG*EELLLE Trigger: TTCAAGTAACAGCTCTTCCCATCCCCTGTTCTTCAT...CTGAGAGTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | GATGCGTACTTCCATATGGCCATTAATAACATTCCCTaGTATTGGCCAAAGCTTTTCCTCTACATATATTCT | + |
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Preference number: 4 (lower is better) Translates to: DAYFHMAINNIP*YWPKLFLYIYS Trigger: AGAATATATGTAGAGGAAAAGCTTTGGCCAATACAAGGGAATGTTATTAATGGCCATATGGAAGTACGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR GCA 90 bp | CTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACTCTCAGGATATTTCCAGTCAGTaGCACAATATACATAACACA | + |
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Preference number: 4 (lower is better) Translates to: LQLLLKTTVCSPETFYSQDISSQ*HNIHNT Trigger: TGTGTTATGTATATTGTGGCACTGACTGGAAATATC...CTGAGAGTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CCA 90 bp | TTTCATCTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACATAATTCTCCAACCCTaGGATTCCAAGCAACATGAA | + |
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Preference number: 4 (lower is better) Translates to: FHLQLLLKTTVCSPETFYIILQP*DSKQHE Trigger: TTCATGTTGCTTGGAATCCCAGGGTTGGAGAATTAT...GTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAGATGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | AGGACAGTTAAGTATCACACAGCAGTCACCTGCTGCTaGTTTTACCTATTTCCCAATTTAAGGATATTATTA | + |
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Preference number: 4 (lower is better) Translates to: RTVKYHTAVTCC*FYLFPNLRILL Trigger: TAATAATATCCTTAAATTGGGAAATAGGTAAAACAAGCAGCAGGTGACTGCTGTGTGATACTTAACTGTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | CTTCAGCTAGGGTTCATCTACTTTCTTGGCATTTGTTaGCAGTATGTAAGACATCACAACAATTTAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: LQLGFIYFLGIC*QYVRHHNNLDK Trigger: TTTGTCTAAATTGTTGTGATGTCTTACATACTGCAAACAAATGCCAAGAAAGTAGATGAACCCTAGCTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | AGTTCTTCAGCTAGGGTTCATCTACTTTCTTGGCATTaGTTTGCAGTATGTAAGACATCACAACAATTTAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSARVHLLSWH*FAVCKTSQQFR Trigger: TCTAAATTGTTGTGATGTCTTACATACTGCAAACAAATGCCAAGAAAGTAGATGAACCCTAGCTGAAGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | GAGATATCTTGTAAATATGTGTTGGTTTGTCAAAGTTaGTTGAATATGTCCTTTGGTCATTTACCTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: EISCKYVLVCQS*LNMSFGHLPGA Trigger: AGCTCCAGGTAAATGACCAAAGGACATATTCAACAAACTTTGACAAACCAACACATATTTACAAGATATCTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| 3UTR CAA 72 bp | ATCTTGAAGGGCTGTGAGATATCTTGTAAATATGTGTaGGTTTGTCAAAGTTTGTTGAATATGTCCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ILKGCEISCKYV*VCQSLLNMSFG Trigger: ACCAAAGGACATATTCAACAAACTTTGACAAACCAACACATATTTACAAGATATCTCACAGCCCTTCAAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS-3UTR CAA 90 bp | GACATAAAGATGGTGAGAATGTCACACCTAATCACTAGAGGTGGCACGCAATGGCATGTACCAAAAGCTTaGAGGCGAGCTTCACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DIKMVRMSHLITRGGTQWHVPKA*RRASPE Trigger: CTCAGGTGAAGCTCGCCTCAAAGCTTTTGGTACATG...CCATTGCGTGCCACCTCTAGTGATTAGGTGTGACATTCTCACCATCTTTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS CCA 90 bp | AACACAGAAAGGAAAGGCAATCCAAAATTGATAATTCTCCAACCCTaGGATTCCAAGCAACATGAAGAACAGGGGATGGGAAGAGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: NTERKGNPKLIILQP*DSKQHEEQGMGRAV Trigger: AACAGCTCTTCCCATCCCCTGTTCTTCATGTTGCTTGGAATCCCAGGGTTGGAGAATTATCAATTTTGGATTGCCTTTCCTTTCTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078191.3 ENSMUST00000217024.2 |
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| CDS-3UTR CAA 90 bp | CTGCAACTTTTGCTCAAAACTACAGTTTGTAGTCCTGAAACATTCTACTCTCAGAAAGGCAATCCAAAATaGATAATTCTCCAACCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LQLLLKTTVCSPETFYSQKGNPK*IILQPW Trigger: CCAGGGTTGGAGAATTATCAATTTTGGATTGCCTTT...CTGAGAGTAGAATGTTTCAGGACTACAAACTGTAGTTTTGAGCAAAAGTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217024.2 |
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| CDS CAA 72 bp | ACCACAGAGAAAGCCACAAAGAGTCCATATCCACGATaGACTCTGGTATCAGCACATACCAACTTGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TTEKATKSPYPR*TLVSAHTNLST Trigger: TGTGCTCAAGTTGGTATGTGCTGATACCAGAGTCAATCGTGGATATGGACTCTTTGTGGCTTTCTCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078191.3 ENSMUST00000217024.2 |
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