Pregenerated sensors for OLFR560 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000110008Ensembl transcript IDs: ENSMUST00000210453.3, ENSMUST00000232246.3, ENSMUST00000239110.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCAAGATACCACATACTTTGGAGAAATAAAGCTGGAACTGACCTaGAAGCTCCCCCTGCTGGGTGGTTTTCATAGGACCAGAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SQDTTYFGEIKLELT*KLPLLGGFHRTRRC Trigger: GCACCTTCTGGTCCTATGAAAACCACCCAGCAGGGGGAGCTTCCAGGTCAGTTCCAGCTTTATTTCTCCAAAGTATGTGGTATCTTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR CCA 90 bp | CAAAACGTGATGGCAAGACCCTATTTCTCAAGATACCACATACTTTaGAGAAATAAAGCTGGAACTGACCTGGAAGCTCCCCCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QNVMARPYFSRYHIL*RNKAGTDLEAPPAG Trigger: CCCAGCAGGGGGAGCTTCCAGGTCAGTTCCAGCTTTATTTCTCCAAAGTATGTGGTATCTTGAGAAATAGGGTCTTGCCATCACGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR TCA 90 bp | TCTTTCTCTATAAGAAGCTATCAATCCTCATCAGAGAAGTTTCTTTaGACAGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: SFSIRSYQSSSEKFL*TVDGRALENATYFS Trigger: AGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGATGAGGATTGATAGCTTCTTATAGAGAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR TCA 90 bp | TTATTTATGTCTAATGTTGTAAATCTGACCAAGAACTCATGGTTGTaGAGATCACAGGCCCCAGGATTAAACTACTGCTATTATTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: LFMSNVVNLTKNSWL*RSQAPGLNYCYYFA Trigger: GGCAAAATAATAGCAGTAGTTTAATCCTGGGGCCTGTGATCTTCACAACCATGAGTTCTTGGTCAGATTTACAACATTAGACATAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR GCA 90 bp | GTTGTGAAGATCACAGGCCCCAGGATTAAACTACTGCTATTATTTTaGCAAATGGACATAGTATCAAACTACCTTCTAAATACACATCTT | + |
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Preference number: 1 (lower is better) Translates to: VVKITGPRIKLLLLF*QMDIVSNYLLNTHL Trigger: AAGATGTGTATTTAGAAGGTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGGGCCTGTGATCTTCACAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGGCGTCTCCTCATCTGTaGAGTAAAGGGGCTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: WVVFIGPEGAIQAAREQKASPHL*SKGAKV Trigger: TACTTTAGCCCCTTTACTTCACAGATGAGGAGACGC...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGTTAGAAGAAATGGTGTaGAGGAAGAGGAACTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: WVVFIGPEGAIQAAREQKLEEMV*RKRNSR Trigger: CCTAGAGTTCCTCTTCCTCCACACCATTTCTTCTAA...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGCCAGGATTAAACTACTaGTATTATTTTGCCAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: WVVFIGPEGAIQAAREQKPGLNY*YYFAKW Trigger: CCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGG...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATGGATTGACAACATGGCCTaGAGCAGGCCGTTTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TSCNNDRTGKIYSWVKSWIDNMA*SRPFSS Trigger: AGAGCTAAACGGCCTGCTTCAGGCCATGTTGTCAAT...CCATGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAATTGACAACATGGCCTaGAGCAGGCCGTTTAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSIDNMA*SRPFSS Trigger: AGAGCTAAACGGCCTGCTTCAGGCCATGTTGTCAAT...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACGCGTCTCCTCATCTGTaGAGTAAAGGGGCTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYASPHL*SKGAKV Trigger: TACTTTAGCCCCTTTACTTCACAGATGAGGAGACGC...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATGGGCGTCTCCTCATCTGTaGAGTAAAGGGGCTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TSCNNDRTGKIYSWVKSWASPHL*SKGAKV Trigger: TACTTTAGCCCCTTTACTTCACAGATGAGGAGACGC...CCATGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGTTAGAAGAAATGGTGTaGAGGAAGAGGAACTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMLEEMV*RKRNSR Trigger: CCTAGAGTTCCTCTTCCTCCACACCATTTCTTCTAA...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATGGTCAGAGAAGTTTCTTTaGACAGTAGATGGCAGAGCG | + |
|
Preference number: 2 (lower is better) Translates to: TSCNNDRTGKIYSWVKSWSEKFL*TVDGRA Trigger: CGCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGA...CCATGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR CCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATTAGAAGAAATGGTGTaGAGGAAGAGGAACTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSLEEMV*RKRNSR Trigger: CCTAGAGTTCCTCTTCCTCCACACCATTTCTTCTAA...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR CAA 90 bp | ATCTTTCTCTATAAGAAGCTATCAATCCTCATCAGAGAAGTTTCTTaGAACAGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IFLYKKLSILIREVS*NSRWQSVRKCYLLF Trigger: GAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGATGAGGATTGATAGCTTCTTATAGAGAAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACCAGAGCGTTAGAAAATaGTACCTACTTTTCTACAAA | + |
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Preference number: 2 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYQSVRK*YLLFYK Trigger: TTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTG...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR TCA 72 bp | AAGGTGCCATCCAGGCTGCTAGGGAACAAAAGTCACTaGTCACCTTACCCAGCTGTGAGTACCACAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: KVPSRLLGNKSH*SPYPAVSTTSC Trigger: GCAGCTTGTGGTACTCACAGCTGGGTAAGGTGATCAGTGACTTTTGTTCCCTAGCAGCCTGGATGGCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR GCA 72 bp | TGGAGGAAGAGGAACTCTAGGCATAAGGCTATATATTaGTTCTCACTTATATATCAGCGTCTCCTCATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WRKRNSRHKAIY*FSLIYQRLLIC Trigger: ACAGATGAGGAGACGCTGATATATAAGTGAGAAGCAATATATAGCCTTATGCCTAGAGTTCCTCTTCCTCCA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR TCA 72 bp | ATAAGAAGCTATCAATCCTCATCAGAGAAGTTTCTTTaGACAGTAGATGGCAGAGCGTTAGAAAATGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: IRSYQSSSEKFL*TVDGRALENAT Trigger: GGTAGCATTTTCTAACGCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGATGAGGATTGATAGCTTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR CCA 72 bp | TCAATCCTCATCAGAGAAGTTTCTTTGAACAGTAGATaGCAGAGCGTTAGAAAATGCTACCTACTTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: SILIREVSLNSR*QSVRKCYLLFY Trigger: GTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGATGAGGATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACATCAGAGAAGTTTCTTaGAACAGTAGATGGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYIREVS*NSRWQS Trigger: GCTCTGCCATCTACTGTTCAAAGAAACTTCTCTGAT...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR CCA 72 bp | AGTATGAAAAGAAGAAGAGTCTCGAGGACAAAGCTCTaGTATATTTCAACACATGGAAATCAAGACAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SMKRRRVSRTKL*YISTHGNQDKQ Trigger: TTGCTTGTCTTGATTTCCATGTGTTGAAATATACCAGAGCTTTGTCCTCGAGACTCTTCTTCTTTTCATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| 3UTR GCA 72 bp | ATCACAGGCCCCAGGATTAAACTACTGCTATTATTTTaGCAAATGGACATAGTATCAAACTACCTTCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ITGPRIKLLLLF*QMDIVSNYLLN Trigger: ATTTAGAAGGTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGGGCCTGTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGATATCCCCAGCATGGTaGCCAGAGTGGAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: WVVFIGPEGAIQAAREQKISPAW*PEWRWR Trigger: TCTCCATCTCCACTCTGGCCACCATGCTGGGGATAT...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGAGAATATCCCCAGCATaGTGGCCAGAGTGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: WVVFIGPEGAIQAAREQKRISPA*WPEWRW Trigger: CCATCTCCACTCTGGCCACCATGCTGGGGATATTCT...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGTCGTGGAGGCTGGGCTaGGTGATAATGACAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: WVVFIGPEGAIQAAREQKSWRLG*VIMTKR Trigger: TCTCTTTGTCATTATCACCCAGCCCAGCCTCCACGA...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR GCA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGGGCAGTCAATCCAACTaGATTGTTGATCCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: WVVFIGPEGAIQAAREQKGSQSN*IVDPGV Trigger: GACACCAGGATCAACAATGCAGTTGGATTGACTGCC...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ATATATTGCTTCTCACTTATATATCAGCGTCTCCTCATCTGTGAAGTAAAGGGGGCATGGTGGCCAGAGTaGAGATGGAGAGCCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IYCFSLIYQRLLICEVKGAWWPE*RWRARG Trigger: ACCTCGGGCTCTCCATCTCCACTCTGGCCACCATGC...CCCCTTTACTTCACAGATGAGGAGACGCTGATATATAAGTGAGAAGCAATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACGCATGGTGGCCAGAGTaGAGATGGAGAGCCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYAWWPE*RWRARG Trigger: ACCTCGGGCTCTCCATCTCCACTCTGGCCACCATGC...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGATATCCCCAGCATGGTaGCCAGAGTGGAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMISPAW*PEWRWR Trigger: TCTCCATCTCCACTCTGGCCACCATGCTGGGGATAT...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ATATATTGCTTCTCACTTATATATCAGCGTCTCCTCATCTGTGAAGTAAAGGGGAGAATATCCCCAGCATaGTGGCCAGAGTGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: IYCFSLIYQRLLICEVKGRISPA*WPEWRW Trigger: CCATCTCCACTCTGGCCACCATGCTGGGGATATTCT...CCCCTTTACTTCACAGATGAGGAGACGCTGATATATAAGTGAGAAGCAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGGCTACAGCCCCGATATaGGAGATACACGTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMATAPI*EIHVLK Trigger: CTTCAGCACGTGTATCTCCCATATCGGGGCTGTAGC...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ATATATTGCTTCTCACTTATATATCAGCGTCTCCTCATCTGTGAAGTAAAGGGGTCGTGGAGGCTGGGCTaGGTGATAATGACAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IYCFSLIYQRLLICEVKGSWRLG*VIMTKR Trigger: TCTCTTTGTCATTATCACCCAGCCCAGCCTCCACGA...CCCCTTTACTTCACAGATGAGGAGACGCTGATATATAAGTGAGAAGCAATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATGGATATCCCCAGCATGGTaGCCAGAGTGGAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TSCNNDRTGKIYSWVKSWISPAW*PEWRWR Trigger: TCTCCATCTCCACTCTGGCCACCATGCTGGGGATAT...CCATGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAAGAATATCCCCAGCATaGTGGCCAGAGTGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSRISPA*WPEWRW Trigger: CCATCTCCACTCTGGCCACCATGCTGGGGATATTCT...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAGCTACAGCCCCGATATaGGAGATACACGTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSATAPI*EIHVLK Trigger: CTTCAGCACGTGTATCTCCCATATCGGGGCTGTAGC...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR TCA 90 bp | ATATATTGCTTCTCACTTATATATCAGCGTCTCCTCATCTGTGAAGTAAAGGGGAAGGAGAATAAGGACTaGGTCCACACCAACAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: IYCFSLIYQRLLICEVKGKENKD*VHTNSR Trigger: TCTACTGTTGGTGTGGACTCAGTCCTTATTCTCCTT...CCCCTTTACTTCACAGATGAGGAGACGCTGATATATAAGTGAGAAGCAATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACTCGTGGAGGCTGGGCTaGGTGATAATGACAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYSWRLG*VIMTKR Trigger: TCTCTTTGTCATTATCACCCAGCCCAGCCTCCACGA...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGGGTATGTACATAGGGTaGAGCTCGTTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMGMYIG*SSFPKS Trigger: AGATTTGGGAAACGAGCTCCACCCTATGTACATACC...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACGGCAGTCAATCCAACTaGATTGTTGATCCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYGSQSN*IVDPGV Trigger: GACACCAGGATCAACAATGCAGTTGGATTGACTGCC...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR GCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAGGCAGTCAATCCAACTaGATTGTTGATCCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSGSQSN*IVDPGV Trigger: GACACCAGGATCAACAATGCAGTTGGATTGACTGCC...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR TCA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGATTGTCACCCCAATTTaGGCTATTCTGGAATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMIVTPI*AILESV Trigger: AACTGATTCCAGAATAGCTCAAATTGGGGTGACAAT...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR TCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAAAGGAGAATAAGGACTaGGTCCACACCAACAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSKENKD*VHTNSR Trigger: TCTACTGTTGGTGTGGACTCAGTCCTTATTCTCCTT...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACGGTATGTACATAGGGTaGAGCTCGTTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYGMYIG*SSFPKS Trigger: AGATTTGGGAAACGAGCTCCACCCTATGTACATACC...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAGGTATGTACATAGGGTaGAGCTCGTTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSGMYIG*SSFPKS Trigger: AGATTTGGGAAACGAGCTCCACCCTATGTACATACC...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR TCA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCAATTGTCACCCCAATTTaGGCTATTCTGGAATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSIVTPI*AILESV Trigger: AACTGATTCCAGAATAGCTCAAATTGGGGTGACAAT...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR TCA 90 bp | ACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCATGGATTGTCACCCCAATTTaGGCTATTCTGGAATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TSCNNDRTGKIYSWVKSWIVTPI*AILESV Trigger: AACTGATTCCAGAATAGCTCAAATTGGGGTGACAAT...CCATGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CAA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGCTGATCTCCCTGGCGTaGAACCAGAATATCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WVVFIGPEGAIQAAREQKLISLA*NQNIPS Trigger: GCTGGGGATATTCTGGTTCAACGCCAGGGAGATCAG...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CAA 90 bp | TGGGTGGTTTTCATAGGACCAGAAGGTGCCATCCAGGCTGCTAGGGAACAAAAGAATTGTCACCCCAATTaGAGCTATTCTGGAATCAGT | + |
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Preference number: 5 (lower is better) Translates to: WVVFIGPEGAIQAAREQKNCHPN*SYSGIS Trigger: ACTGATTCCAGAATAGCTCAAATTGGGGTGACAATT...CTTTTGTTCCCTAGCAGCCTGGATGGCACCTTCTGGTCCTATGAAAACCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CAA 90 bp | AGTAGATGGCAGAGCGTTAGAAAATGCTACCTACTTTTCTACAAAGGAATGATGTCCCTGACAGGGCAGTaGCATAGAGAAAGCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SRWQSVRKCYLLFYKGMMSLTGQ*HRESRR Trigger: CCTTCTGCTTTCTCTATGCAACTGCCCTGTCAGGGA...CATCATTCCTTTGTAGAAAAGTAGGTAGCATTTTCTAACGCTCTGCCATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CAA 90 bp | ACCACAAGCTGCAATAATGATAGAACTGGCAAAATATATTCATGGGTGAAATCACTGATCTCCCTGGCGTaGAACCAGAATATCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TTSCNNDRTGKIYSWVKSLISLA*NQNIPS Trigger: GCTGGGGATATTCTGGTTCAACGCCAGGGAGATCAG...TGATTTCACCCATGAATATATTTTGCCAGTTCTATCATTATTGCAGCTTGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS TCA 90 bp | GGTGTCAACATTACAGTCCCTCTGATGACAATTGTCACCCCAATTTaGGCTATTCTGGAATCAGTTAAAATAGTGGCATACCTAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GVNITVPLMTIVTPI*AILESVKIVAYLRG Trigger: CCCTCTTAGGTATGCCACTATTTTAACTGATTCCAGAATAGCTCAAATTGGGGTGACAATTGTCATCAGAGGGACTGTAATGTTGACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGATTAAACTACTGCTATTATTTTGCCAAATGGACATAGTATCAAACTACTCCCTGACAGGGCAGTaGCATAGAGAAAGCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PRIKLLLLFCQMDIVSNYSLTGQ*HRESRR Trigger: CCTTCTGCTTTCTCTATGCAACTGCCCTGTCAGGGA...GTAGTTTGATACTATGTCCATTTGGCAAAATAATAGCAGTAGTTTAATCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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| CDS TCA 72 bp | ATTACAGTCCCTCTGATGACAATTGTCACCCCAATTTaGGCTATTCTGGAATCAGTTAAAATAGTGGCATAC | + |
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Preference number: 6 (lower is better) Translates to: ITVPLMTIVTPI*AILESVKIVAY Trigger: GTATGCCACTATTTTAACTGATTCCAGAATAGCTCAAATTGGGGTGACAATTGTCATCAGAGGGACTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000210453.3 ENSMUST00000232246.3 ENSMUST00000239110.2 |
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