Pregenerated sensors for OLFR56 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040328Ensembl transcript IDs: ENSMUST00000056759.11, ENSMUST00000102785.4, ENSMUST00000179282.8, ENSMUST00000203149.3, ENSMUST00000203810.3, ENSMUST00000238881.2, ENSMUST00000239127.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAGGTCAGTCTGGCTCTaGGAGAAGATGCCTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRRSVWL*EKMPRR Trigger: CCTCCTAGGCATCTTCTCCCAGAGCCAGACTGACCT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 |
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| CDS-3UTR GCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTGGGCAGGCTCATGGCTaGCACCATCTGAATTATTCC | + |
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Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRGQAHG*HHLNYS Trigger: GGAATAATTCAGATGGTGGCAGCCATGAGCCTGCCC...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAGGTCAGTCTGGCTCTaGGAGAAGATGCCTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVRSVWL*EKMPRR Trigger: CCTCCTAGGCATCTTCTCCCAGAGCCAGACTGACCT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 |
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| CDS-3UTR CCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAGGAGAAGGTCAGTCTaGCTCTGGGAGAAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRRRRSV*LWEKMP Trigger: AGGCATCTTCTCCCAGAGCCAGACTGACCTTCTCCT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 |
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| CDS-3UTR GCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGGGCAGGCTCATGGCTaGCACCATCTGAATTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVGQAHG*HHLNYS Trigger: GGAATAATTCAGATGGTGGCAGCCATGAGCCTGCCC...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGCACAGCCCCCAAGATaGGAGCATAGGAAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVAQPPR*EHRKSQ Trigger: TTGTGACTTCCTATGCTCGCATCTTGGGGGCTGTGC...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAGCGCGATATCGCCTTaGCCTCAGGTAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRSAISP*PQVDEH Trigger: ATGTTCATCTACCTGAGGCCAAGGCGATATCGCGCT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAGGAGAAGGTCAGTCTaGCTCTGGGAGAAGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVRRRSV*LWEKMP Trigger: AGGCATCTTCTCCCAGAGCCAGACTGACCTTCTCCT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAGATGCCTAGGAGGATaGACCCATCTACAGACGATT | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRRCLGG*THLQTI Trigger: AATCGTCTGTAGATGGGTTCATCCTCCTAGGCATCT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 |
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| CDS-3UTR GCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTGTAGATGAACATTGCTaGCCCGTAGAAGAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRVDEHC*PVEERD Trigger: GTCTCTCTCTTCTACGGGGCAGCAATGTTCATCTAC...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTCAGGTAGATGAACATTaGTGCCCCGTAGAAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRQVDEH*CPVEER Trigger: TCTCTCTTCTACGGGGCAGCAATGTTCATCTACCTG...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTGAACTTCCAGCAATCTaGAGACAGACCTTTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRELPAI*RQTFWL Trigger: GAGCCAAAAGGTCTGTCTCCAGATTGCTGGAAGTTC...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAGTAGGGCAGGCTCATaGCTGCCACCATCTGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVSRAGS*LPPSEL Trigger: TAATTCAGATGGTGGCAGCCATGAGCCTGCCCTACT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAGCGCGATATCGCCTTaGCCTCAGGTAGATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVSAISP*PQVDEH Trigger: ATGTTCATCTACCTGAGGCCAAGGCGATATCGCGCT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTATGGCTGCCACCATCTaGATTATTCCATCAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRMAATI*IIPSRI Trigger: GATCCTTGATGGAATAATTCAGATGGTGGCAGCCAT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAGATGAACATTGCTaGCCCGTAGAAGAGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVVDEHC*PVEERD Trigger: GTCTCTCTCTTCTACGGGGCAGCAATGTTCATCTAC...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCCAGGTAGATGAACATTaGTGCCCCGTAGAAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVQVDEH*CPVEER Trigger: TCTCTCTTCTACGGGGCAGCAATGTTCATCTACCTG...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGAACTTCCAGCAATCTaGAGACAGACCTTTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVELPAI*RQTFWL Trigger: GAGCCAAAAGGTCTGTCTCCAGATTGCTGGAAGTTC...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCATGGCTGCCACCATCTaGATTATTCCATCAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVMAATI*IIPSRI Trigger: GATCCTTGATGGAATAATTCAGATGGTGGCAGCCAT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCACTTCACAGAAGAAGTaGTCTATATACCGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVTSQKK*SIYREP Trigger: TGGCTCACGGTATATAGATCACTTCTTCTGTGAAGT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCCATAGGAAGTCACAATaGTCGAGAAAGGAAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVHRKSQ*SRKEEA Trigger: TGCTTCTTCCTTTCTCGATCATTGTGACTTCCTATG...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAACTGTGTAGAAGATTaGGACAACTTTGTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRNCVED*DNFVMA Trigger: AGCCATGACAAAGTTGTCTCAATCTTCTACACAGTT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCGGGCAGGCTCATGGCTaGCACCATCTGAATTATTCC | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFGQAHG*HHLNYS Trigger: GGAATAATTCAGATGGTGGCAGCCATGAGCCTGCCC...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCGCACAGCCCCCAAGATaGGAGCATAGGAAGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFAQPPR*EHRKSQ Trigger: TTGTGACTTCCTATGCTCGCATCTTGGGGGCTGTGC...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAACTGTGTAGAAGATTaGGACAACTTTGTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: FRFIGSGPFKILVVKGHVNCVED*DNFVMA Trigger: AGCCATGACAAAGTTGTCTCAATCTTCTACACAGTT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCAGTAGGGCAGGCTCATaGCTGCCACCATCTGAATTA | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFSRAGS*LPPSEL Trigger: TAATTCAGATGGTGGCAGCCATGAGCCTGCCCTACT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCAGCGCGATATCGCCTTaGCCTCAGGTAGATGAACAT | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFSAISP*PQVDEH Trigger: ATGTTCATCTACCTGAGGCCAAGGCGATATCGCGCT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCGTAGATGAACATTGCTaGCCCGTAGAAGAGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFVDEHC*PVEERD Trigger: GTCTCTCTCTTCTACGGGGCAGCAATGTTCATCTAC...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCCAGGTAGATGAACATTaGTGCCCCGTAGAAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFQVDEH*CPVEER Trigger: TCTCTCTTCTACGGGGCAGCAATGTTCATCTACCTG...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCGAACTTCCAGCAATCTaGAGACAGACCTTTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFELPAI*RQTFWL Trigger: GAGCCAAAAGGTCTGTCTCCAGATTGCTGGAAGTTC...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCATGGCTGCCACCATCTaGATTATTCCATCAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFMAATI*IIPSRI Trigger: GATCCTTGATGGAATAATTCAGATGGTGGCAGCCAT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCACTTCACAGAAGAAGTaGTCTATATACCGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFTSQKK*SIYREP Trigger: TGGCTCACGGTATATAGATCACTTCTTCTGTGAAGT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCCATAGGAAGTCACAATaGTCGAGAAAGGAAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFHRKSQ*SRKEEA Trigger: TGCTTCTTCCTTTCTCGATCATTGTGACTTCCTATG...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR TCA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCAACTGTGTAGAAGATTaGGACAACTTTGTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFNCVED*DNFVMA Trigger: AGCCATGACAAAGTTGTCTCAATCTTCTACACAGTT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CAA 90 bp | CAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCGTAAGATTGAGACAACTTaGTCATGGCTAGGAGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: QIHWKWSLQNPCGKGTCRKIETT*SWLGAR Trigger: TCGCGCTCCTAGCCATGACAAAGTTGTCTCAATCTT...ACGACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CAA 90 bp | TTCAGATTCATTGGAAGTGGTCCCTTCAAAATCCTTGTGGTAAAGGGACATGTCAAGATTGAGACAACTTaGTCATGGCTAGGAGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: FRFIGSGPFKILVVKGHVKIETT*SWLGAR Trigger: TCGCGCTCCTAGCCATGACAAAGTTGTCTCAATCTT...GACATGTCCCTTTACCACAAGGATTTTGAAGGGACCACTTCCAATGAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTAAAGGGACATGTCGTGATTCTGTTTTATCTATAAAGAAACAGAGATTCAAGATTGAGACAACTTaGTCATGGCTAGGAGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: CGKGTCRDSVLSIKKQRFKIETT*SWLGAR Trigger: TCGCGCTCCTAGCCATGACAAAGTTGTCTCAATCTT...GAATCTCTGTTTCTTTATAGATAAAACAGAATCACGACATGTCCCTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000056759.11 ENSMUST00000102785.4 ENSMUST00000179282.8 ENSMUST00000203149.3 ENSMUST00000203810.3 ENSMUST00000238881.2 ENSMUST00000239127.2 |
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