Pregenerated sensors for OLFR559 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066272Ensembl transcript IDs: ENSMUST00000084816.4, ENSMUST00000215657.2
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTCATGGCCAAGAGGACTaGGGACTCTACCACAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCHGQED*GLYHRE Trigger: TTCTCTGTGGTAGAGTCCTCAGTCCTCTTGGCCATG...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTGAGACAGGAGGATCTTaGCAGGGCAGTAGTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCETGGS*QGSSSV Trigger: GACTGAACTACTGCCCTGGCAAGATCCTCCTGTCTC...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTCTGGGATGCCAATCATaGGAAAAGACTGTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCLGCQS*EKTVAG Trigger: TCCAGCCACAGTCTTTTCTCATGATTGGCATCCCAG...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTGTGCTACAGTGTACATaGAGGAGAAGGGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCVLQCT*RRRGWR Trigger: TCTCCATCCCCTTCTCCTTCATGTACACTGTAGCAC...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTCACAGGCCAGCTTCATaGCATCAGCATGGAAACAGA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCHRPAS*HQHGNR Trigger: TCTGTTTCCATGCTGATGTCATGAAGCTGGCCTGTG...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTGTTAGTGAGGACAGATaGATAGCGCAGTGGGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCVSEDR*IAQWVG Trigger: TCCAACCCACTGCGCTATGCATCTGTCCTCACTAAC...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTGCAATGTGGATAAACTaGGACCCACATCACTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCAMWIN*DPHHLG Trigger: CCCTAAGTGATGTGGGTCTCAGTTTATCCACATTGC...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTTGGAAACAGAATGAGTaGGACAGGAGGATCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCWKQNE*DRRILP Trigger: TGGCAAGATCCTCCTGTCTCACTCATTCTGTTTCCA...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTAGATGCATAGCGCAGTaGGTTGGAGATAGCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCRCIAQ*VGDSHK Trigger: TTTGTGGCTATCTCCAACCCACTGCGCTATGCATCT...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTAGTCTACACCCACTGTaGACAGAACCACATAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCSLHPL*TEPHRV Trigger: GACTCTATGTGGTTCTGTCCACAGTGGGTGTAGACT...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTGGAGACACCTATGACTaGAATGTAGAAGACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCGDTYD*NVEDQD Trigger: GTCCTGGTCTTCTACATTCCAGTCATAGGTGTCTCC...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTTCATGGAGACACCTATaGCTGGAATGTAGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCSWRHL*LECRRP Trigger: TGGTCTTCTACATTCCAGTCATAGGTGTCTCCATGA...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTTGCTTTCCAAAACGATaGATCATGGAGACACCTATG | + |
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Preference number: 4 (lower is better) Translates to: FFFLQILHRLPSLISMQCCFPKR*IMETPM Trigger: CATAGGTGTCTCCATGATCCATCGTTTTGGAAAGCA...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS TCA 90 bp | AGTCAAACCAGAGCACAGCCAGGGTGGAAGGCAATGTGGATAAACTaGGACCCACATCACTTAGGGCTAGCATGGACAGAAAGTAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SQTRAQPGWKAMWIN*DPHHLGLAWTESST Trigger: TGTACTACTTTCTGTCCATGCTAGCCCTAAGTGATGTGGGTCTCAGTTTATCCACATTGCCTTCCACCCTGGCTGTGCTCTGGTTTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084816.4 ENSMUST00000215657.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTTGGAAGAAGGAGATGTaGATGAATGGCCCAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: FFFLQILHRLPSLISMQCWKKEM*MNGPEG Trigger: CCCTTCTGGGCCATTCATCAACATCTCCTTCTTCCA...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTCTCCAAATACTTCACAGGCTCCCAAGTCTCATAAGCATGCAATGTATCCTGATGATGACATaGTTAGTGAGGACAGATGCA | + |
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Preference number: 5 (lower is better) Translates to: FFFLQILHRLPSLISMQCILMMT*LVRTDA Trigger: TGCATCTGTCCTCACTAACAATGTCATCATCAGGAT...ACATTGCATGCTTATGAGACTTGGGAGCCTGTGAAGTATTTGGAGAAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215657.2 |
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