Pregenerated sensors for OLFR558 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070423Ensembl transcript IDs: ENSMUST00000094124.5
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCTCATTTTGTATGGACCCACCTTTTCCCTAGTCTTACTTCCTaGTCAGTCTCATTTAGCCTACTCAGTCTCTTGTCTCTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: APHFVWTHLFPSLTS*SVSFSLLSLLSLPF Trigger: AAAAGGAAGAGACAAGAGACTGAGTAGGCTAAATGAGACTGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR TCA 90 bp | AGCCTACTCAGTCTCTTGTCTCTTCCTTTTGACTCTCTACTCTGGTaGCTAGCCCTCTCTTTATACAACAAGCTCCTGGATATTCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SLLSLLSLPFDSLLW*LALSLYNKLLDILK Trigger: TTTGAGAATATCCAGGAGCTTGTTGTATAAAGAGAGGGCTAGTCACCAGAGTAGAGAGTCAAAAGGAAGAGACAAGAGACTGAGTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 90 bp | CTCATACTCACCAGCCACACCCTGGATCTGAATATGACTTTTCAGTaGATGATAATTCCAATCCCCGAACAATCTACTTCTACTATGCTC | + |
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Preference number: 1 (lower is better) Translates to: LILTSHTLDLNMTFQ*MIIPIPEQSTSTML Trigger: GAGCATAGTAGAAGTAGATTGTTCGGGGATTGGAATTATCATCCACTGAAAAGTCATATTCAGATCCAGGGTGTGGCTGGTGAGTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR TCA 90 bp | TATCATACACACAGTTCTTATATTCTGGAGTATAGTCCAAGAAGTTaGATATGCAAGTGGGTCTCTGTGCCGGCCATGTACAAGAAATTC | + |
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Preference number: 1 (lower is better) Translates to: YHTHSSYILEYSPRS*ICKWVSVPAMYKKF Trigger: GAATTTCTTGTACATGGCCGGCACAGAGACCCACTTGCATATTCAACTTCTTGGACTATACTCCAGAATATAAGAACTGTGTGTATGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 90 bp | AAAGTGACCCAATCTTGCATTGAGTACATTTCATACTATTTCCTTTaGCCACCCTCACCTTGGCCTAGTCAATTTTATCATACACACAGT | + |
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Preference number: 1 (lower is better) Translates to: KVTQSCIEYISYYFL*PPSPWPSQFYHTHS Trigger: ACTGTGTGTATGATAAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACTCAATGCAAGATTGGGTCACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CAA 90 bp | GGCTCTGGGTATCTGTGGTTCTTGCTTGTGTGTGTGCTCCTCATTTaGTATGGACCCACCTTTTCCCTAGTCTTACTTCCTGGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GSGYLWFLLVCVLLI*YGPTFSLVLLPGQS Trigger: AGACTGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGCACACACACAAGCAAGAACCACAGATACCCAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR TCA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTGACTCTCTACTCTGGTaGCTAGCCCTCTCTTTATAC | + |
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Preference number: 2 (lower is better) Translates to: STFHTISFGHPHLGLVNFDSLLW*LALSLY Trigger: GTATAAAGAGAGGGCTAGTCACCAGAGTAGAGAGTC...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CCA 90 bp | ACATTTCACTTTGCAAATAAGAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCGCTCCTCATTTTGTATaGACCCACCTTTTCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: TFHFANKSMSFSQLRCQSAPHFV*THLFPS Trigger: ACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGC...GCTCTGACATCGCAGTTGAGAGAAAGACATGCTCTTATTTGCAAAGTGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CAA 90 bp | ACCGTCATAACAATGTGTGTCATCTCACAATGTAGGCAAGTGTATTaGTTCCAACCTGGGACCCAGAAGAAAACCAATATTTCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVITMCVISQCRQVY*FQPGTQKKTNISLE Trigger: CTCCAAAGAAATATTGGTTTTCTTCTGGGTCCCAGGTTGGAACAAATACACTTGCCTACATTGTGAGATGACACACATTGTTATGACGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR GCA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTTACATCAGGCAGGAATaGAGTCATTATTTCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: STFHTISFGHPHLGLVNFYIRQE*SHYFPH Trigger: ATGAGGGAAATAATGACTGCATTCCTGCCTGATGTA...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CCA 90 bp | ATACTCACCAGCCACACCCTGGATCTGAATATGACTTTTCAGTGGATGATAATTTATCAATTTCCACATTaGTGCAATCAGGATACCAAT | + |
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Preference number: 2 (lower is better) Translates to: ILTSHTLDLNMTFQWMIIYQFPH*CNQDTN Trigger: ATTGGTATCCTGATTGCACCAATGTGGAAATTGATA...AATTATCATCCACTGAAAAGTCATATTCAGATCCAGGGTGTGGCTGGTGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CCA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTAACAGTGTAAGATTCTaGAAATTCACAACTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: STFHTISFGHPHLGLVNFNSVRF*KFTTQH Trigger: ATGCTGAGTTGTGAATTTCCAGAATCTTACACTGTT...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CAA 90 bp | CAACCTGGGACCCAGAAGAAAACCAATATTTCTTTGGAGATTGTTTaGAATAAGGAATCCAATTCTAACTTCTCAGAAATCCAAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QPGTQKKTNISLEIV*NKESNSNFSEIQSH Trigger: ATGACTTTGGATTTCTGAGAAGTTAGAATTGGATTCCTTATTCAAAACAATCTCCAAAGAAATATTGGTTTTCTTCTGGGTCCCAGGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | CATGTCTTTCTCTCAACTGCGATGTCAGAGCACTCCTaGGCAATGAATGACTATCCACCCTCCTCTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HVFLSTAMSEHS*AMNDYPPSSPQ Trigger: CTGAGGAGAGGAGGGTGGATAGTCATTCATTGCCCAGGAGTGCTCTGACATCGCAGTTGAGAGAAAGACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR TCA 72 bp | TTCTCTCAACTGCGATGTCAGAGCACTCCTGGGCAATaGATGACTATCCACCCTCCTCTCCTCAGTTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: FSQLRCQSTPGQ*MTIHPPLLSSK Trigger: CTTTGAACTGAGGAGAGGAGGGTGGATAGTCATTCATTGCCCAGGAGTGCTCTGACATCGCAGTTGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR GCA 72 bp | ATAGTCCAAGAAGTTGAATATGCAAGTGGGTCTCTGTaGCGGCCATGTACAAGAAATTCAACCCTGCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: IVQEVEYASGSL*RPCTRNSTLPP Trigger: AGGGGGCAGGGTTGAATTTCTTGTACATGGCCGGCACAGAGACCCACTTGCATATTCAACTTCTTGGACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | GTGGTTCTTGCTTGTGTGTGTGCTCCTCATTTTGTATaGACCCACCTTTTCCCTAGTCTTACTTCCTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VVLACVCAPHFV*THLFPSLTSWS Trigger: TGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGCACACACACAAGCAAGAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | ACATTTCACTTTGCAAATAAGAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCGGGTATCTGTGGTTCTaGCTTGTGTGTGTGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: TFHFANKSMSFSQLRCQSGYLWF*LVCVLL Trigger: GAGGAGCACACACACAAGCAAGAACCACAGATACCC...GCTCTGACATCGCAGTTGAGAGAAAGACATGCTCTTATTTGCAAAGTGAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR GCA 72 bp | CTTCTCCTAAGTCACACCTCAGATACCCACGGAATCTaGAGCTTTTCCACAGAAACCACACTGTTTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLLSHTSDTHGI*SFSTETTLFLK Trigger: TTTGAGAAACAGTGTGGTTTCTGTGGAAAAGCTGCAGATTCCGTGGGTATCTGAGGTGTGACTTAGGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | TCATTATTTCCCTCATTGCAGCATAGCTTAAGGCTCTaGGTATCTGTGGTTCTTGCTTGTGTGTGTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLFPSLQHSLRL*VSVVLACVCAP Trigger: AGGAGCACACACACAAGCAAGAACCACAGATACCCAGAGCCTTAAGCTATGCTGCAATGAGGGAAATAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | ACATTTCACTTTGCAAATAAGAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCTGTAGGCAAGTGTATTaGTTCCAACCTGGGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: TFHFANKSMSFSQLRCQSCRQVY*FQPGTQ Trigger: CTGGGTCCCAGGTTGGAACAAATACACTTGCCTACA...GCTCTGACATCGCAGTTGAGAGAAAGACATGCTCTTATTTGCAAAGTGAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR TCA 72 bp | CACAGTTCTTATATTCTGGAGTATAGTCCAAGAAGTTaGATATGCAAGTGGGTCTCTGTGCCGGCCATGTAC | + |
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Preference number: 3 (lower is better) Translates to: HSSYILEYSPRS*ICKWVSVPAMY Trigger: GTACATGGCCGGCACAGAGACCCACTTGCATATTCAACTTCTTGGACTATACTCCAGAATATAAGAACTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR TCA 72 bp | CTCCTCTCCTCAGTTCAAAGTGACCCAATCTTGCATTaGGTACATTTCATACTATTTCCTTTGGCCACCCTC | + |
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Preference number: 3 (lower is better) Translates to: LLSSVQSDPILH*VHFILFPLATL Trigger: GAGGGTGGCCAAAGGAAATAGTATGAAATGTACTCAATGCAAGATTGGGTCACTTTGAACTGAGGAGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | TTTGTATGGACCCACCTTTTCCCTAGTCTTACTTCCTaGTCAGTCTCATTTAGCCTACTCAGTCTCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FVWTHLFPSLTS*SVSFSLLSLLS Trigger: AGACAAGAGACTGAGTAGGCTAAATGAGACTGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | CCACAGAAACCACACTGTTTCTCAAATAAACCTACTTaGGAACACTCCAGTTTCCATTGTGCAGACACTGTA | + |
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Preference number: 3 (lower is better) Translates to: PQKPHCFSNKPT*EHSSFHCADTV Trigger: TACAGTGTCTGCACAATGGAAACTGGAGTGTTCCCAAGTAGGTTTATTTGAGAAACAGTGTGGTTTCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | TTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTATCATATGTGTGCTCCTCATTTaGTATGGACCCACCTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FHTISFGHPHLGLVNFIICVLLI*YGPTFS Trigger: GGAAAAGGTGGGTCCATACAAAATGAGGAGCACACA...TATGATAAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | CACAGAAACCACACTGTTTCTCAAATAAACCTACTTGGGAACACTCCAGTTTCCGTGAGTTACAGAACTTaGAATGGAGGAAGGTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: HRNHTVSQINLLGNTPVSVSYRT*NGGRFH Trigger: ATGAAACCTTCCTCCATTCAAAGTTCTGTAACTCAC...GGAAACTGGAGTGTTCCCAAGTAGGTTTATTTGAGAAACAGTGTGGTTTCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTACACTCCAGTTTCCATaGTGCAGACACTGTAATGAT | + |
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Preference number: 3 (lower is better) Translates to: STFHTISFGHPHLGLVNFTLQFP*CRHCND Trigger: ATCATTACAGTGTCTGCACAATGGAAACTGGAGTGT...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR-3UTR CAA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTCAGCAAGTTTCATCCTaGAAAGATCTGAGCTATATT | + |
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Preference number: 3 (lower is better) Translates to: STFHTISFGHPHLGLVNFQQVSS*KDLSYI Trigger: AATATAGCTCAGATCTTTCAAGGATGAAACTTGCTG...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | CAATCTTGCATTGAGTACATTTCATACTATTTCCTTTaGCCACCCTCACCTTGGCCTAGTCAATTTTATCAT | + |
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Preference number: 3 (lower is better) Translates to: QSCIEYISYYFL*PPSPWPSQFYH Trigger: ATGATAAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACTCAATGCAAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CCA 72 bp | TACATTTCATACTATTTCCTTTGGCCACCCTCACCTTaGCCTAGTCAATTTTATCATACACACAGTTCTTAT | + |
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Preference number: 3 (lower is better) Translates to: YISYYFLWPPSP*PSQFYHTHSSY Trigger: ATAAGAACTGTGTGTATGATAAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CAA 72 bp | CCGGCCATGTACAAGAAATTCAACCCTGCCCCCTCTTaGCTGCCTGCCTCTCATACTCACCAGCCACACCCT | + |
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Preference number: 4 (lower is better) Translates to: PAMYKKFNPAPS*LPASHTHQPHP Trigger: AGGGTGTGGCTGGTGAGTATGAGAGGCAGGCAGCAAAGAGGGGGCAGGGTTGAATTTCTTGTACATGGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | GCTCCTCATTTTGTATGGACCCACCTTTTCCCTAGTCTTACTTCCTGGTCAGTCTGGCCAGCAGCACTGTaGACTCCATGCCAGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: APHFVWTHLFPSLTSWSVWPAAL*TPCQTR Trigger: CCTTGTCTGGCATGGAGTCCACAGTGCTGCTGGCCA...GACTGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | GAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCACTCCTGGGCAATGAATGACCCAAACGCTTTTGCCTaGGCTTCACGTGTCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EHVFLSTAMSEHSWAMNDPNAFA*ASRVKP Trigger: GGGCTTGACACGTGAAGCCCAGGCAAAAGCGTTTGG...GTCATTCATTGCCCAGGAGTGCTCTGACATCGCAGTTGAGAGAAAGACATGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | GAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCACTCCTGGGCAATGAATGACTGGATGAGGTGGAAATaGGGATGTCTAGGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: EHVFLSTAMSEHSWAMNDWMRWK*GCLGQK Trigger: TTTCTGGCCTAGACATCCTCATTTCCACCTCATCCA...GTCATTCATTGCCCAGGAGTGCTCTGACATCGCAGTTGAGAGAAAGACATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | ACATTTCACTTTGCAAATAAGAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCTTAGTACTGCACCCCTaGCCACAGCAGCCATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TFHFANKSMSFSQLRCQSLVLHP*PQQPCQ Trigger: TTGGCATGGCTGCTGTGGTCAGGGGTGCAGTACTAA...GCTCTGACATCGCAGTTGAGAGAAAGACATGCTCTTATTTGCAAAGTGAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | GTGTCATCTCACAATGTAGGCAAGTGTATTTGTTCCAACCTGGGACCCAGAAGACATGTGAAACACAAGTaGCAAACGCTTTTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VSSHNVGKCICSNLGPRRHVKHK*QTLLPG Trigger: CCCAGGCAAAAGCGTTTGGCACTTGTGTTTCACATG...TCTTCTGGGTCCCAGGTTGGAACAAATACACTTGCCTACATTGTGAGATGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | TCCTGGATATTCTCAAATGCTTCTCCTAAGTCACACCTCAGATACCCACGGAATGGAAAAGACGAAGAATaGGCTGCCGGATCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SWIFSNASPKSHLRYPRNGKDEE*AAGSPL Trigger: CAAAGGAGATCCGGCAGCGCATTCTTCGTCTTTTCC...ATTCCGTGGGTATCTGAGGTGTGACTTAGGAGAAGCATTTGAGAATATCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | TGGGTATCTGTGGTTCTTGCTTGTGTGTGTGCTCCTCATTTTGTATGGACCCACAAGGCACATAGAAGATaGAAACAGCACACACATGTG | + |
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Preference number: 4 (lower is better) Translates to: WVSVVLACVCAPHFVWTHKAHRR*KQHTHV Trigger: CACATGTGTGTGCTGTTTTCATCTTCTATGTGCCTT...GTGGGTCCATACAAAATGAGGAGCACACACACAAGCAAGAACCACAGATACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | ACATTTCACTTTGCAAATAAGAGCATGTCTTTCTCTCAACTGCGATGTCAGAGCGTCAGCACAGTGGCATaGCGTAGAGGATGGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: TFHFANKSMSFSQLRCQSVSTVA*RRGWQM Trigger: CATTTGCCATCCTCTACGGCATGCCACTGTGCTGAC...GCTCTGACATCGCAGTTGAGAGAAAGACATGCTCTTATTTGCAAAGTGAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | ATGGAGATTGCAGGTGTTCTTCCATTCCACGTAGAATTTCCACAGCAAGTTTCAAGTGCCAAACGCTTTTaGCTGGGCTTCACGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: MEIAGVLPFHVEFPQQVSSAKRF*LGFTCQ Trigger: TTGACACGTGAAGCCCAGGCAAAAGCGTTTGGCACT...TGAAACTTGCTGTGGAAATTCTACGTGGAATGGAAGAACACCTGCAATCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| 3UTR CAA 72 bp | GTACATCAGGCAGGAATGCAGTCATTATTTCCCTCATaGCAGCATAGCTTAAGGCTCTGGGTATCTGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VHQAGMQSLFPS*QHSLRLWVSVV Trigger: AACCACAGATACCCAGAGCCTTAAGCTATGCTGCAATGAGGGAAATAATGACTGCATTCCTGCCTGATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | CACAGAAACCACACTGTTTCTCAAATAAACCTACTTGGGAACACTCCAGTTTCCAACAGCACACACATGTaGAACACAAGTGCCAAACGC | + |
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Preference number: 4 (lower is better) Translates to: HRNHTVSQINLLGNTPVSNSTHM*NTSAKR Trigger: GCGTTTGGCACTTGTGTTTCACATGTGTGTGCTGTT...GGAAACTGGAGTGTTCCCAAGTAGGTTTATTTGAGAAACAGTGTGGTTTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | TCCTGGATATTCTCAAATGCTTCTCCTAAGTCACACCTCAGATACCCACGGAATGATCTGAAGTGTGTGTaGTCACGAGGAAAAGACGAA | + |
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Preference number: 4 (lower is better) Translates to: SWIFSNASPKSHLRYPRNDLKCV*SRGKDE Trigger: TTCGTCTTTTCCTCGTGACCACACACACTTCAGATC...ATTCCGTGGGTATCTGAGGTGTGACTTAGGAGAAGCATTTGAGAATATCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | AGCCCTCTCTTTATACAACAAGCTCCTGGATATTCTCAAATGCTTCTCCTAAGTGTCCAAACCAATGGCTaGGATGATGACAATGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPLFIQQAPGYSQMLLLSVQTNG*DDDNES Trigger: GGACTCATTGTCATCATCTCAGCCATTGGTTTGGAC...ACTTAGGAGAAGCATTTGAGAATATCCAGGAGCTTGTTGTATAAAGAGAGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTCTTTATACAACAAGCTCCTGGATATTCTCAAATGCTTCTCCTAAGTAGACGAAGAATGCGCTaGCGGATCTCCTTTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SPLFIQQAPGYSQMLLLSRRRMR*RISFVF Trigger: AAAGACAAAGGAGATCCGGCAGCGCATTCTTCGTCT...ACTTAGGAGAAGCATTTGAGAATATCCAGGAGCTTGTTGTATAAAGAGAGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | ATGGAGATTGCAGGTGTTCTTCCATTCCACGTAGAATTTCCACAGCAAGTTTCACAGACAAGGAATGGATaGCAAACATCTGTACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: MEIAGVLPFHVEFPQQVSQTRNG*QTSVPD Trigger: GTCTGGTACAGATGTTTGCCATCCATTCCTTGTCTG...TGAAACTTGCTGTGGAAATTCTACGTGGAATGGAAGAACACCTGCAATCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR GCA 90 bp | TTCAAAAACAGTGTAAGATTCTGGAAATTCACAACTCAGCATTCTGCCAGTCTGCTCTTGCTGAAACGGTaGACCATCGACAATCCAATG | + |
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Preference number: 4 (lower is better) Translates to: FKNSVRFWKFTTQHSASLLLLKR*TIDNPM Trigger: CATTGGATTGTCGATGGTGCACCGTTTCAGCAAGAG...CAGACTGGCAGAATGCTGAGTTGTGAATTTCCAGAATCTTACACTGTTTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTATGCCAGACAAGGAATaGATGGCAAACATCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: STFHTISFGHPHLGLVNFMPDKE*MANICT Trigger: GGTACAGATGTTTGCCATCCATTCCTTGTCTGGCAT...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CCA 90 bp | AGTACATTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTAATGAGAAAGGATGTTaGAACGACAGAAAGGCAACC | + |
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Preference number: 4 (lower is better) Translates to: STFHTISFGHPHLGLVNFNEKGC*NDRKAT Trigger: GGTTGCCTTTCTGTCGTTCCAACATCCTTTCTCATT...AAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAATGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR TCA 90 bp | TTTCATACTATTTCCTTTGGCCACCCTCACCTTGGCCTAGTCAATTTTATCATATCCTCACAATGTAGATaGTTGTCAAGTTACCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: FHTISFGHPHLGLVNFIISSQCR*LSSYLA Trigger: TGCTAGGTAACTTGACAATCATCTACATTGTGAGGA...TATGATAAAATTGACTAGGCCAAGGTGAGGGTGGCCAAAGGAAATAGTATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | TGGGTATCTGTGGTTCTTGCTTGTGTGTGTGCTCCTCATTTTGTATGGACCCACAAGTGCCAAACGCTTTaGCCTGGGCTTCACGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: WVSVVLACVCAPHFVWTHKCQTL*PGLHVS Trigger: TGACACGTGAAGCCCAGGCAAAAGCGTTTGGCACTT...GTGGGTCCATACAAAATGAGGAGCACACACACAAGCAAGAACCACAGATACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CCA 90 bp | AAAACAGCACACACATGTGAAACACAAGTGCCAAACGCTTTTGCCTaGGCTTCACGTGTCAAGCCCAACACAGTCTTGAGGATGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: KTAHTCETQVPNAFA*ASRVKPNTVLRMSK Trigger: TTTGCTCATCCTCAAGACTGTGTTGGGCTTGACACGTGAAGCCCAGGCAAAAGCGTTTGGCACTTGTGTTTCACATGTGTGTGCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | GCTCCTCATTTTGTATGGACCCACCTTTTCCCTAGTCTTACTTCCTGGTCAGTCTGGATGGTAGTGGAATaGAACCAAAAGATGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: APHFVWTHLFPSLTSWSVWMVVE*NQKMAI Trigger: GATGGCCATCTTTTGGTTCAATTCCACTACCATCCA...GACTGACCAGGAAGTAAGACTAGGGAAAAGGTGGGTCCATACAAAATGAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | AGCCCTCTCTTTATACAACAAGCTCCTGGATATTCTCAAATGCTTCTCCTAAGTGCAGCCATGCCAATCTaGGCAACACGAGGCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: SPLFIQQAPGYSQMLLLSAAMPI*ATRGNV Trigger: GACATTGCCTCGTGTTGCCAAGATTGGCATGGCTGC...ACTTAGGAGAAGCATTTGAGAATATCCAGGAGCTTGTTGTATAAAGAGAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | AGCCCTCTCTTTATACAACAAGCTCCTGGATATTCTCAAATGCTTCTCCTAAGTAGAGAGTCACGCCTCTaGCTGAAACGGTGCACCATC | + |
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Preference number: 5 (lower is better) Translates to: SPLFIQQAPGYSQMLLLSRESRL*LKRCTI Trigger: GATGGTGCACCGTTTCAGCAAGAGGCGTGACTCTCT...ACTTAGGAGAAGCATTTGAGAATATCCAGGAGCTTGTTGTATAAAGAGAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CCA 90 bp | GACAAGGAATGGATGGCAAACATCTGTACCAGACAAGCATCAAACTaGATGGTAGTGGAATTGAACCAAAAGATGGCCATCATTTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: DKEWMANICTRQASN*MVVELNQKMAIIFG Trigger: GCCAAAAATGATGGCCATCTTTTGGTTCAATTCCACTACCATCCAGTTTGATGCTTGTCTGGTACAGATGTTTGCCATCCATTCCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | ATGGAGATTGCAGGTGTTCTTCCATTCCACGTAGAATTTCCACAGCAAGTTTCAAGATGGCCATCATTTTaGGCATGGATGAGGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: MEIAGVLPFHVEFPQQVSRWPSF*AWMRWK Trigger: TTTCCACCTCATCCATGCCAAAAATGATGGCCATCT...TGAAACTTGCTGTGGAAATTCTACGTGGAATGGAAGAACACCTGCAATCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS-3UTR CAA 90 bp | ATGGAGATTGCAGGTGTTCTTCCATTCCACGTAGAATTTCCACAGCAAGTTTCACAGAAAGGCAACCTTTaGATGAAGACAGGTAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: MEIAGVLPFHVEFPQQVSQKGNL*MKTGKG Trigger: ACCCTTACCTGTCTTCATCAAAAGGTTGCCTTTCTG...TGAAACTTGCTGTGGAAATTCTACGTGGAATGGAAGAACACCTGCAATCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CCA 72 bp | CACACATGTGAAACACAAGTGCCAAACGCTTTTGCCTaGGCTTCACGTGTCAAGCCCAACACAGTCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: HTCETQVPNAFA*ASRVKPNTVLR Trigger: CCTCAAGACTGTGTTGGGCTTGACACGTGAAGCCCAGGCAAAAGCGTTTGGCACTTGTGTTTCACATGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CAA 72 bp | CAGCACACACATGTGAAACACAAGTGCCAAACGCTTTaGCCTGGGCTTCACGTGTCAAGCCCAACACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QHTHVKHKCQTL*PGLHVSSPTQS Trigger: AGACTGTGTTGGGCTTGACACGTGAAGCCCAGGCAAAAGCGTTTGGCACTTGTGTTTCACATGTGTGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CAA 90 bp | GCAAACATCTGTACCAGACAAGCATCAAACTGGATGGTAGTGGAATaGAACCAAAAGATGGCCATCATTTTTGGCATGGATGAGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ANICTRQASNWMVVE*NQKMAIIFGMDEVE Trigger: TTCCACCTCATCCATGCCAAAAATGATGGCCATCTTTTGGTTCAATTCCACTACCATCCAGTTTGATGCTTGTCTGGTACAGATGTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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| CDS CAA 72 bp | TGTACCAGACAAGCATCAAACTGGATGGTAGTGGAATaGAACCAAAAGATGGCCATCATTTTTGGCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: CTRQASNWMVVE*NQKMAIIFGMD Trigger: ATCCATGCCAAAAATGATGGCCATCTTTTGGTTCAATTCCACTACCATCCAGTTTGATGCTTGTCTGGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094124.5 |
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