Pregenerated sensors for OLFR556 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073969Ensembl transcript IDs: ENSMUST00000213485.2, ENSMUST00000217526.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTaGTTTCCATTGTATGTGAGTGTACCTGCAGTGGGATTGCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: CATMNVSASHCGLEP*FPLYVSVPAVGLLH Trigger: ATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR GCA 90 bp | ACATCAGAACTCTTTTCCCTGGTTTCATACAGTCAGCCATCCATGTaGTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TSELFSLVSYSQPSM*YHECECQSLWLGAL Trigger: CAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATGGCTGACTGTATGAAACCAGGGAAAAGAGTTCTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR GCA 90 bp | TCACTGTGGCTTGGAGCCCTGGTTTCCATTGTATGTGAGTGTACCTaGAGTGGGATTGCTGCATCACAGGTGATCCCTGCTTTTCATATT | + |
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Preference number: 1 (lower is better) Translates to: SLWLGALVSIVCECT*SGIAASQVIPAFHI Trigger: AATATGAAAAGCAGGGATCACCTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAGCCACAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR TCA 90 bp | TGCATAAGGAATAAACATGGGAGTCAAATAAAATGGAACCCTCAGTaGACCAGAGAACAAGATCCACCAGTCTCTACCACAACACGGGGG | + |
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Preference number: 1 (lower is better) Translates to: CIRNKHGSQIKWNPQ*TREQDPPVSTTTRG Trigger: CCCCCGTGTTGTGGTAGAGACTGGTGGATCTTGTTCTCTGGTTCACTGAGGGTTCCATTTTATTTGACTCCCATGTTTATTCCTTATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR TCA 90 bp | CCATTGTATGTGAGTGTACCTGCAGTGGGATTGCTGCATCACAGGTaGTCCCTGCTTTTCATATTTCATAGATGTCAGACACTGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: PLYVSVPAVGLLHHR*SLLFIFHRCQTLSP Trigger: TGGTGACAGTGTCTGACATCTATGAAATATGAAAAGCAGGGATCACCTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR TCA 90 bp | ATGGGTATTTTCCTAAGATTTCCTCATTTGCTTATCGCAGTCTGCTaGAGTAGCTACCGTTATTATGCCTACATTTCATCAATGAACATG | + |
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Preference number: 1 (lower is better) Translates to: MGIFLRFPHLLIAVC*SSYRYYAYISSMNM Trigger: CATGTTCATTGATGAAATGTAGGCATAATAACGGTAGCTACTTCAGCAGACTGCGATAAGCAAATGAGGAAATCTTAGGAAAATACCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCCCAGTCACTGTGGCTTaGAGCCCTGGTTTCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSPVTVA*SPGFHC Trigger: ACAATGGAAACCAGGGCTCCAAGCCACAGTGACTGG...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGAAGTCATCCTTGCAGTaGCTGGAACACTGGAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: HPCATMNVSASHCGLEPWKSSLQ*LEHWRS Trigger: CGACCTCCAGTGTTCCAGTCACTGCAAGGATGACTT...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGGTTGGACCCAGAGCATaGTTCTCTCCATCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: HPCATMNVSASHCGLEPWVGPRA*FSPSCV Trigger: AACACAGGATGGAGAGAATCATGCTCTGGGTCCAAC...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGGAAGTGGAAGTGTTATaGCAGGACACTCTACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HPCATMNVSASHCGLEPWEVEVL*QDTLRL Trigger: CAGGCGTAGAGTGTCCTGGCATAACACTTCCACTTC...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCAAATGGAACCCTCAGTaGACCAGAGAACAAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSKWNPQ*TREQDP Trigger: TGGATCTTGTTCTCTGGTTCACTGAGGGTTCCATTT...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGCTCTCAGAAGAGAGTTaGACCCAGAGCATGATTCTC | + |
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Preference number: 2 (lower is better) Translates to: HPCATMNVSASHCGLEPWLSEES*TQSMIL Trigger: GAGAATCATGCTCTGGGTCCAACTCTCTTCTGAGAG...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCCCTAATAAAACTGTGTaGCTCTCAGAAGAGAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSPNKTV*LSEESW Trigger: CCAACTCTCTTCTGAGAGTCACACAGTTTTATTAGG...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGTTGCTGCATCACAGGTaGTCCCTGCTTTTCATATTT | + |
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Preference number: 2 (lower is better) Translates to: HPCATMNVSASHCGLEPWLLHHR*SLLFIF Trigger: AAATATGAAAAGCAGGGATCACCTGTGATGCAGCAA...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCCCTATATGGTGCCTTTaGATTCCATTTTGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSPIWCL*IPFCPL Trigger: CAAAGGACAAAATGGAATGCAAAGGCACCATATAGG...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACGCATTCCCAACACCATaGCCAGCATCAGATCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: ICMWHAYATVSMSRSENNAFPTP*PASDLL Trigger: TAACAGATCTGATGCTGGTCATGGTGTTGGGAATGC...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGTTTCCATTGTATGTGAGTGTACCTGCAGTGGGATTGCTGCATCACAGAAAATCTGTCCTAGGTaGAGGAGATGTCTGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: ALVSIVCECTCSGIAASQKICPR*RRCLHK Trigger: CTTATGCAGACATCTCCTCCACCTAGGACAGATTTT...CTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | TCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAAGTTGGTTGTTGGACCCAGAGCATaGTTCTCTCCATCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SITMQRGPVYPHFHPKLVVGPRA*FSPSCV Trigger: AACACAGGATGGAGAGAATCATGCTCTGGGTCCAAC...AACCAACTTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACCCTATATGGTGCCTTTaGATTCCATTTTGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ICMWHAYATVSMSRSENNPIWCL*IPFCPL Trigger: CAAAGGACAAAATGGAATGCAAAGGCACCATATAGG...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTAGTCAGCCATCCATGTaGTACCATGAATGTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFSQPSM*YHECEC Trigger: GCACTCACATTCATGGTAGCACATGGATGGCTGACT...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTTGTGGCTTGGAGCCCTaGTTTCCATTGTATGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFCGLEP*FPLYVS Trigger: ACTCACATACAATGGAAACCAGGGCTCCAAGCCACA...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACGGTCTTAGATGTCAATaGATCATTCAATCCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: ICMWHAYATVSMSRSENNGLRCQ*IIQSLK Trigger: CTTCAGGGATTGAATGATCCATTGACATCTAAGACC...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | ACTATCACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCAGAAGTGGAAGTGTTATaGCAGGACACTCTACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TITIFNNHAKGSSLSTFSEVEVL*QDTLRL Trigger: CAGGCGTAGAGTGTCCTGGCATAACACTTCCACTTC...TGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGTGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR CAA 90 bp | ATGTCAATGGATCATTCAATCCCTGAAGGGGTCGTGACTCATAGGTaGAGAACCACTGCTCTAATGGGTATTTTCCTAAGATTTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: MSMDHSIPEGVVTHR*RTTALMGIFLRFPH Trigger: ATGAGGAAATCTTAGGAAAATACCCATTAGAGCAGTGGTTCTCAACCTATGAGTCACGACCCCTTCAGGGATTGAATGATCCATTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACGCAAATCACATTCTCTaGCAAAACTTCAATCTGATA | + |
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Preference number: 2 (lower is better) Translates to: ICMWHAYATVSMSRSENNANHIL*QNFNLI Trigger: TATCAGATTGAAGTTTTGGCAGAGAATGTGATTTGC...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAAGTTGGTTGGTGGAGGAGATGTCTaGATAAGGAATAAACATGGG | + |
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Preference number: 2 (lower is better) Translates to: SITMQRGPVYPHFHPKLVGGGDV*IRNKHG Trigger: CCCATGTTTATTCCTTATGCAGACATCTCCTCCACC...AACCAACTTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACATCACAGGTGATCCCTaGTTTTCATATTTCATAGAT | + |
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Preference number: 2 (lower is better) Translates to: ICMWHAYATVSMSRSENNITGDP*FSYFID Trigger: ATCTATGAAATATGAAAAGCAGGGATCACCTGTGAT...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | TTATTATGCCTACATTTCATCAATGAACATGAGATACAGAAAGTGCACAGAGCTTACCTGCAGTGGGATTaGTGCATCACAGGTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: LLCLHFINEHEIQKVHRAYLQWD*CITGDP Trigger: GGGATCACCTGTGATGCAGCAATCCCACTGCAGGTA...AGCTCTGTGCACTTTCTGTATCTCATGTTCATTGATGAAATGTAGGCATAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTAAGTCTCCTAAGAAGTaGAAGTGTTATGCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFKSPKK*KCYART Trigger: TGTCCTGGCATAACACTTCCACTTCTTAGGAGACTT...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTAAAATCTGTCCTAGGTaGAGGAGATGTCTGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFKICPR*RRCLHK Trigger: CTTATGCAGACATCTCCTCCACCTAGGACAGATTTT...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTCTCTCTAATGACCAGTaGCAAAAAGCATCATCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFLSNDQ*QKASSS Trigger: ACTTGATGATGCTTTTTGTCACTGGTCATTAGAGAG...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTTGCATATCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTTGAATGCATTCCCAACACCATaGCCAGCATCAGATCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SFCISCKVGSHLIASHLNAFPTP*PASDLL Trigger: TAACAGATCTGATGCTGGTCATGGTGTTGGGAATGC...ATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGATATGCAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAACTCTCTAATGACCAGTaGCAAAAAGCATCATCAAGT | + |
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Preference number: 2 (lower is better) Translates to: TIFNNHAKGSSLSTFSPKLSNDQ*QKASSS Trigger: ACTTGATGATGCTTTTTGTCACTGGTCATTAGAGAG...TTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTTGCATATCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTTGAATAAATGGAACCCTCAGTaGACCAGAGAACAAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: SFCISCKVGSHLIASHLNKWNPQ*TREQDP Trigger: TGGATCTTGTTCTCTGGTTCACTGAGGGTTCCATTT...ATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGATATGCAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAAGCAAATCACATTCTCTaGCAAAACTTCAATCTGATA | + |
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Preference number: 2 (lower is better) Translates to: TIFNNHAKGSSLSTFSPKANHIL*QNFNLI Trigger: TATCAGATTGAAGTTTTGGCAGAGAATGTGATTTGC...TTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTATGCCTACATTTCATCAATGAACATGAGATACAGAAAGTGCACAGAGCTAAGTCTCCTAAGAAGTaGAAGTGTTATGCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: LLCLHFINEHEIQKVHRAKSPKK*KCYART Trigger: TGTCCTGGCATAACACTTCCACTTCTTAGGAGACTT...AGCTCTGTGCACTTTCTGTATCTCATGTTCATTGATGAAATGTAGGCATAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTTGCATATCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTTGAATGTCAGTACTACACCATaGTTTTTCATAGATGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: SFCISCKVGSHLIASHLNVSTTP*FFIDVK Trigger: CTTTACATCTATGAAAAAGCATGGTGTAGTACTGAC...ATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGATATGCAAAAAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCCCATCCTGTGTTGGGTaGTTTGTTTGGTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSPSCVG*FVWLVG Trigger: ACCAACCAACCAAACAAACAACCCAACACAGGATGG...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR TCA 72 bp | GTCACTGTGGCTTGGAGCCCTGGTTTCCATTGTATGTaGGTGTACCTGCAGTGGGATTGCTGCATCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: VTVAWSPGFHCM*VYLQWDCCITG Trigger: ACCTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAGCCACAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR GCA 72 bp | CTTGGAGCCCTGGTTTCCATTGTATGTGAGTGTACCTaGAGTGGGATTGCTGCATCACAGGTGATCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LGALVSIVCECT*SGIAASQVIPA Trigger: AGCAGGGATCACCTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGCCATCCTGTGTTGGGTaGTTTGTTTGGTTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: HPCATMNVSASHCGLEPWPSCVG*FVWLVG Trigger: ACCAACCAACCAAACAAACAACCCAACACAGGATGG...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CAA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGTCTCTCCATCCTGTGTaGGGTTGTTTGTTTGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: HPCATMNVSASHCGLEPWSLHPV*GCLFGW Trigger: CCAACCAAACAAACAACCCAACACAGGATGGAGAGA...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACGCCAGTCACTGTGGCTaGGAGCCCTGGTTTCCATTG | + |
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Preference number: 3 (lower is better) Translates to: ICMWHAYATVSMSRSENNASHCG*EPWFPL Trigger: CAATGGAAACCAGGGCTCCAAGCCACAGTGACTGGC...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCGAGTTAGCTGGTCATTaGCATATCATCCTTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSELAGH*HIILTG Trigger: TCCTGTAAGGATGATATGCAAATGACCAGCTAACTC...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR GCA 72 bp | TACAGTCAGCCATCCATGTGCTACCATGAATGTGAGTaGCAGTCACTGTGGCTTGGAGCCCTGGTTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: YSQPSMCYHECE*QSLWLGALVSI Trigger: AATGGAAACCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATGGCTGACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CCA 72 bp | ATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTaGTTTCCATTGTATGTGAGTGTACCTGCAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MNVSASHCGLEP*FPLYVSVPAVG Trigger: TCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR TCA 72 bp | CTGTGTGACTCTCAGAAGAGAGTTGGACCCAGAGCATaGTTCTCTCCATCCTGTGTTGGGTTGTTTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LCDSQKRVGPRA*FSPSCVGLFVW Trigger: CCAAACAAACAACCCAACACAGGATGGAGAGAATCATGCTCTGGGTCCAACTCTCTTCTGAGAGTCACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR TCA 72 bp | GTGAGTGTACCTGCAGTGGGATTGCTGCATCACAGGTaGTCCCTGCTTTTCATATTTCATAGATGTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VSVPAVGLLHHR*SLLFIFHRCQT Trigger: TGTCTGACATCTATGAAATATGAAAAGCAGGGATCACCTGTGATGCAGCAATCCCACTGCAGGTACACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR GCA 72 bp | TACCTGCAGTGGGATTGCTGCATCACAGGTGATCCCTaGTTTTCATATTTCATAGATGTCAGACACTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YLQWDCCITGDP*FSYFIDVRHCH Trigger: GTGACAGTGTCTGACATCTATGAAATATGAAAAGCAGGGATCACCTGTGATGCAGCAATCCCACTGCAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CCA 72 bp | AAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTaGTTTCATACAGTCAGCCATCCATGTGCTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: KKLQIQHQNSFP*FHTVSHPCATM Trigger: CATGGTAGCACATGGATGGCTGACTGTATGAAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CCA 72 bp | AGTTGGACCCAGAGCATGATTCTCTCCATCCTGTGTTaGGTTGTTTGTTTGGTTGGTTGGTTTGTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWTQSMILSILC*VVCLVGWFVLF Trigger: AAACAAAACAAACCAACCAACCAAACAAACAACCCAACACAGGATGGAGAGAATCATGCTCTGGGTCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTATCACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCATCTCTCCATCCTGTGTaGGGTTGTTTGTTTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TITIFNNHAKGSSLSTFSSLHPV*GCLFGW Trigger: CCAACCAAACAAACAACCCAACACAGGATGGAGAGA...TGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGTGATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR TCA 72 bp | AATAAACATGGGAGTCAAATAAAATGGAACCCTCAGTaGACCAGAGAACAAGATCCACCAGTCTCTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: NKHGSQIKWNPQ*TREQDPPVSTT Trigger: TGTGGTAGAGACTGGTGGATCTTGTTCTCTGGTTCACTGAGGGTTCCATTTTATTTGACTCCCATGTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR TCA 72 bp | CACTGTCATTTTAGATTTCACCTCTCTAATGACCAGTaGCAAAAAGCATCATCAAGTGAGTTAGCTGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HCHFRFHLSNDQ*QKASSSELAGH Trigger: ATGACCAGCTAACTCACTTGATGATGCTTTTTGTCACTGGTCATTAGAGAGGTGAAATCTAAAATGACAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | CATCCATGTGCTACCATGAATGTGAGTGCCAGTCACTGTGGCTTGGAGCCCTGGTCAGCTAATAGCACTTaGGTGTGCAGTGGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HPCATMNVSASHCGLEPWSANST*VCSGTR Trigger: CCGAGTTCCACTGCACACTCAAGTGCTATTAGCTGA...CCAGGGCTCCAAGCCACAGTGACTGGCACTCACATTCATGGTAGCACATGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | AGTGCCAGTCACTGTGGCTTGGAGCCCTGGTTTCCATaGTATGTGAGTGTACCTGCAGTGGGATTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASHCGLEPWFP*YVSVPAVGLLH Trigger: ATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGCTCCAAGCCACAGTGACTGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | CGCCTGTCCATGTCCGTAGACCTTAAAGTCATCCTTGCAGTGACTGGAACACTGCCAAGAGGAAGAAAGTaGCAGGGGATTCCATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSMSVDLKVILAVTGTLPRGRK*QGIPLC Trigger: ACACAATGGAATCCCCTGGCACTTTCTTCCTCTTGG...CAGTGTTCCAGTCACTGCAAGGATGACTTTAAGGTCTACGGACATGGACAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACCTGTCTCCACAGCAGTaGCCGCATGGACAAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ICMWHAYATVSMSRSENNLSPQQ*PHGQST Trigger: TGTACTTTGTCCATGCGGCCACTGCTGTGGAGACAG...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCATGTCAAGGTCAGAGAACAACTTCCAGGCGTCCGTCCCCTCCTTCCATTGGAGGCACAAAATaGCAAATGACTCAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPCQGQRTTSRRPSPPSIGGTK*QMTQHP Trigger: TGGATGTTGAGTCATTTGCCATTTTGTGCCTCCAAT...GGAAGGAGGGGACGGACGCCTGGAAGTTGTTCTCTGACCTTGACATGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACCCACTGTGCATTCCTTaGGGACAGTCCAAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ICMWHAYATVSMSRSENNPLCIP*GQSKNC Trigger: GCAGTTTTTGGACTGTCCTCAAGGAATGCACAGTGG...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTTTCCATTGTATGTGAGTGTACCTGCAGTGGGATTGCTGCATCACAGTTCCTAAGACAGCTATaGTATACATGGTACTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALVSIVCECTCSGIAASQFLRQL*YTWYSV Trigger: CACTGAGTACCATGTATAGCATAGCTGTCTTAGGAA...CTGTGATGCAGCAATCCCACTGCAGGTACACTCACATACAATGGAAACCAGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTCTGTCTCCACAGCAGTaGCCGCATGGACAAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFLSPQQ*PHGQST Trigger: TGTACTTTGTCCATGCGGCCACTGCTGTGGAGACAG...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | CGCCTGTCCATGTCCGTAGACCTTAAAGTCATCCTTGCAGTGACTGGAACACTGGGACAGTCCAAAAACTaGCTTGAGAATCAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLSMSVDLKVILAVTGTLGQSKN*LENQRI Trigger: TATTCTTTGATTCTCAAGGCAGTTTTTGGACTGTCC...CAGTGTTCCAGTCACTGCAAGGATGACTTTAAGGTCTACGGACATGGACAGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAAGTTGGTTTCAGCTAATAGCACTTaGGTGTGCAGTGGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SITMQRGPVYPHFHPKLVSANST*VCSGTR Trigger: CCGAGTTCCACTGCACACTCAAGTGCTATTAGCTGA...AACCAACTTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | GAGTTGGACCCAGAGCATGATTCTCTCCATCCTGTGTaGGGTTGTTTGTTTGGTTGGTTGGTTTGTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELDPEHDSLHPV*GCLFGWLVCFV Trigger: AACAAAACAAACCAACCAACCAAACAAACAACCCAACACAGGATGGAGAGAATCATGCTCTGGGTCCAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | ACCAGCATCAGATCTGTTAACCAAACATATCTGAGTTaGGGTCTGACCTCCCTATTCTGCTCCACTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSIRSVNQTYLS*GLTSLFCSTAY Trigger: ATAAGCAGTGGAGCAGAATAGGGAGGTCAGACCCAAACTCAGATATGTTTGGTTAACAGATCTGATGCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | TCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTaGAATGTCCAGCATTCCCAACACCATGACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCKVGSHLIASH*NVQHSQHHDQH Trigger: ATGCTGGTCATGGTGTTGGGAATGCTGGACATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | GATCATTCAATCCCTGAAGGGGTCGTGACTCATAGGTaGAGAACCACTGCTCTAATGGGTATTTTCCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHSIPEGVVTHR*RTTALMGIFLR Trigger: TCTTAGGAAAATACCCATTAGAGCAGTGGTTCTCAACCTATGAGTCACGACCCCTTCAGGGATTGAATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | ACTATCACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCAACTGAAACCCTGGGATaGCCAAGAGGAAGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TITIFNNHAKGSSLSTFSTETLG*PRGRKC Trigger: GCACTTTCTTCCTCTTGGGCATCCCAGGGTTTCAGT...TGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGTGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | ACTATCACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCAAATAAGAGGCTGAAATaGAGGCCACATCTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TITIFNNHAKGSSLSTFSNKRLK*RPHLSP Trigger: TGGGCTCAGATGTGGCCTTCATTTCAGCCTCTTATT...TGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGTGATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTGTCCAAAAACTGCCTTaGGAATCAAAGAATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFVQKLP*ESKNKR Trigger: CCTCTTATTCTTTGATTCTCAAGGCAGTTTTTGGAC...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTGCATATCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTTGAATACTGAAACCCTGGGATaGCCAAGAGGAAGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCISCKVGSHLIASHLNTETLG*PRGRKC Trigger: GCACTTTCTTCCTCTTGGGCATCCCAGGGTTTCAGT...ATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGATATGCAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTGTGTCAGTACTACACCATGCTTTTTCATAGATGTAAAGCTAAGGTCAAATAAGAGGCTGAAATaGAGGCCACATCTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSTTPCFFIDVKLRSNKRLK*RPHLSP Trigger: TGGGCTCAGATGTGGCCTTCATTTCAGCCTCTTATT...TGACCTTAGCTTTACATCTATGAAAAAGCATGGTGTAGTACTGACACAAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCACCCAAAGTTGGTTGTCCAAAAACTGCCTTaGGAATCAAAGAATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SITMQRGPVYPHFHPKLVVQKLP*ESKNKR Trigger: CCTCTTATTCTTTGATTCTCAAGGCAGTTTTTGGAC...AACCAACTTTGGGTGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | TTATTATGCCTACATTTCATCAATGAACATGAGATACAGAAAGTGCACAGAGCTCCAAGAGGAAGAAAGTaGCAGGGGATTCCATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCLHFINEHEIQKVHRAPRGRK*QGIPLC Trigger: ACACAATGGAATCCCCTGGCACTTTCTTCCTCTTGG...AGCTCTGTGCACTTTCTGTATCTCATGTTCATTGATGAAATGTAGGCATAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CCA 90 bp | ACTATCACCATCTTCAATAACCATGCAAAGGGGTCCAGTTTATCCACATTTTCAAATGAGGAACTACATTaGAGGCACAAAATGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TITIFNNHAKGSSLSTFSNEELH*RHKMAN Trigger: ATTTGCCATTTTGTGCCTCCAATGTAGTTCCTCATT...TGAAAATGTGGATAAACTGGACCCCTTTGCATGGTTATTGAAGATGGTGATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTGCATATCATGTAAGGTAGGGTCTCATCTGATAGCTTCACATTTGAATATTGGAGGCACAAAATaGCAAATGACTCAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFCISCKVGSHLIASHLNIGGTK*QMTQHP Trigger: TGGATGTTGAGTCATTTGCCATTTTGTGCCTCCAAT...ATTCAAATGTGAAGCTATCAGATGAGACCCTACCTTACATGATATGCAAAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTGTGTCAGTACTACACCATGCTTTTTCATAGATGTAAAGCTAAGGTCAGGACAGTCCAAAAACTaGCTTGAGAATCAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSTTPCFFIDVKLRSGQSKN*LENQRI Trigger: TATTCTTTGATTCTCAAGGCAGTTTTTGGACTGTCC...TGACCTTAGCTTTACATCTATGAAAAAGCATGGTGTAGTACTGACACAAAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| 3UTR CAA 72 bp | ATCCTTCTAACCTATATGGTGCCTTTGCATTCCATTTaGTCCTTTGTTACACAAAATTATTTCTGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLTYMVPLHSI*SFVTQNYFCPL Trigger: CAAGGGACAGAAATAATTTTGTGTAACAAAGGACAAAATGGAATGCAAAGGCACCATATAGGTTAGAAGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTATGTGGCATGCCTATGCCACAGTCTCCATGTCAAGGTCAGAGAACAACTGCCAGGGGATTCCATaGTGTGGTTGTAGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICMWHAYATVSMSRSENNCQGIP*CGCRMA Trigger: GGCCATCCTACAACCACACAATGGAATCCCCTGGCA...GTTGTTCTCTGACCTTGACATGGAGACTGTGGCATAGGCATGCCACATACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGACCAGGAAAGAAGCTGCAGATTCAACATCAGAACTCTTTTCCCTGGTTTTGCCAGGGGATTCCATaGTGTGGTTGTAGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRPGKKLQIQHQNSFPWFCQGIP*CGCRMA Trigger: GGCCATCCTACAACCACACAATGGAATCCCCTGGCA...AAACCAGGGAAAAGAGTTCTGATGTTGAATCTGCAGCTTCTTTCCTGGTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213485.2 ENSMUST00000217526.2 |
||