Pregenerated sensors for OLFR554 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073971Ensembl transcript IDs: ENSMUST00000098221.2, ENSMUST00000214841.3, ENSMUST00000215995.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGATCCCCATTGCAAAGAAATCCTATGGATGAATCAGGATTCATaGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: TDPHCKEILWMNQDS*SGEGWSLFPGASCD Trigger: ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATGGGGATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 90 bp | TTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTaGTTCAAAATAGCAAAGAGCACAAGGGCAATTGGCAAATACAGT | + |
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Preference number: 1 (lower is better) Translates to: FMEWGGMVSLPWSLM*FKIAKSTRAIGKYS Trigger: ACTGTATTTGCCAATTGCCCTTGTGCTCTTTGCTATTTTGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 90 bp | CAACTTCATATTAAACTGATCCCCATTGCAAAGAAATCCTATGGATaGATCAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: QLHIKLIPIAKKSYG*IRIHGVGRDGLSSL Trigger: CAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATGGGGATCAGTTTAATATGAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATATGCCTCCTTCTCCATaGATTTATGTGAGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QDSWSGEGWSLFPGASCDMPPSP*IYVREK Trigger: CTTCTCTCTCACATAAATTCATGGAGAAGGAGGCAT...ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATCTTTGTAACTACAAATaGTGGACCCAACGACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QDSWSGEGWSLFPGASCDLCNYK*WTQRLR Trigger: TCTGAGTCGTTGGGTCCACCATTTGTAGTTACAAAG...ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATAACACTGATCTAGAGTaGTTAAGTCATTTTGCACAT | + |
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Preference number: 2 (lower is better) Translates to: QDSWSGEGWSLFPGASCDNTDLE*LSHFAH Trigger: ATGTGCAAAATGACTTAAGCACTCTAGATCAGTGTT...ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CAA 90 bp | AACGACTCAGACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTaGAATGCCTCCTTCTCCATGAATTTATGTGAGAGAGAAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NDSDGGSHLGNSSLC*NASFSMNLCEREEE Trigger: TTCCTCTTCTCTCTCACATAAATTCATGGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTCTGAGTCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTAGTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTACTCCATGAATTTATGTaGGAGAGAAGAGGAAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: GLVVTPKRVINFSQNTDLLHEFM*ERRGSV Trigger: GACGCTTCCTCTTCTCTCTCACATAAATTCATGGAG...TAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTACTAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTAGAGTGCAACCCTTATAACATCTaGGAGGATAAGAATCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VVTPKRVINFSQNTDLECNPYNI*EDKNRV Trigger: CACACGATTCTTATCCTCTCAGATGTTATAAGGGTT...GCACTCTAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR GCA 90 bp | ACATATCTTCCACCTTTAGAAGGTTCAGAATTGTGCACTCCTCCTCGCTGTTCCCAGTCTATGTTTGAATaGCTCCTTCTCCATGAATTT | + |
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Preference number: 2 (lower is better) Translates to: TYLPPLEGSELCTPPRCSQSMFE*LLLHEF Trigger: AAATTCATGGAGAAGGAGGCATTCAAACATAGACTG...GGAACAGCGAGGAGGAGTGCACAATTCTGAACCTTCTAAAGGTGGAAGATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTAAAACAATACCTTTTGTCAACCCATGCACCCTATTGGCTATACAATCCATGTAACTACAAATGGTaGACCCAACGACTCAGACGG | + |
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Preference number: 2 (lower is better) Translates to: LLKQYLLSTHAPYWLYNPCNYKW*TQRLRR Trigger: CCGTCTGAGTCGTTGGGTCCACCATTTGTAGTTACA...TGGATTGTATAGCCAATAGGGTGCATGGGTTGACAAAAGGTATTGTTTTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR TCA 90 bp | TACAACCCATGTGTCTATAAATTGCAACTTCATATTAAACTGATCCCCATTGCACTCCATGAATTTATGTaGGAGAGAAGAGGAAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: YNPCVYKLQLHIKLIPIALHEFM*ERRGSV Trigger: GACGCTTCCTCTTCTCTCTCACATAAATTCATGGAG...TGCAATGGGGATCAGTTTAATATGAAGTTGCAATTTATAGACACATGGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CCA 90 bp | CACGTTGACAAAACACTAGCCAGTCTAAGTCCTGATCAAATAAAACATAGAAGTCTTTGTAACTACAAATaGTGGACCCAACGACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HVDKTLASLSPDQIKHRSLCNYK*WTQRLR Trigger: TCTGAGTCGTTGGGTCCACCATTTGTAGTTACAAAG...ACTTCTATGTTTTATTTGATCAGGACTTAGACTGGCTAGTGTTTTGTCAACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR TCA 90 bp | CACGTTGACAAAACACTAGCCAGTCTAAGTCCTGATCAAATAAAACATAGAAGTAACCCTTATAACATCTaGGAGGATAAGAATCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HVDKTLASLSPDQIKHRSNPYNI*EDKNRV Trigger: CACACGATTCTTATCCTCTCAGATGTTATAAGGGTT...ACTTCTATGTTTTATTTGATCAGGACTTAGACTGGCTAGTGTTTTGTCAACGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CCA 72 bp | CACTCCTCCTCGCTGTTCCTTTGTAACTACAAATGGTaGACCCAACGACTCAGACGGGGGTTCCCATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HSSSLFLCNYKW*TQRLRRGFPSG Trigger: CCCAGATGGGAACCCCCGTCTGAGTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CCA 72 bp | GTGCACTCCTCCTCGCTGTTCCTTTGTAACTACAAATaGTGGACCCAACGACTCAGACGGGGGTTCCCATCT | + |
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Preference number: 3 (lower is better) Translates to: VHSSSLFLCNYK*WTQRLRRGFPS Trigger: AGATGGGAACCCCCGTCTGAGTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 72 bp | TGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTaGTTCAAAATAGCAAAGAGCACAAGGGCAATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: WGGMVSLPWSLM*FKIAKSTRAIG Trigger: GCCAATTGCCCTTGTGCTCTTTGCTATTTTGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCAAGAGCACAAGGGCAATaGGCAAATACAGTCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: DSWSGEGWSLFPGASCDSRAQGQ*ANTVTF Trigger: GAAAGTGACTGTATTTGCCAATTGCCCTTGTGCTCT...TGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CCA 72 bp | CATTGCAAAGAAATCCTATGGATGAATCAGGATTCATaGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: HCKEILWMNQDS*SGEGWSLFPGA Trigger: GGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 72 bp | ATTAAACTGATCCCCATTGCAAAGAAATCCTATGGATaGATCAGGATTCATGGAGTGGGGAGGGATGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IKLIPIAKKSYG*IRIHGVGRDGL Trigger: GAGACCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATGGGGATCAGTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTAGAGTGCATCACATTGCTGTTGTaGAGTGATCTTCATAATCCA | + |
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Preference number: 3 (lower is better) Translates to: VVTPKRVINFSQNTDLECITLLL*SDLHNP Trigger: TGGATTATGAAGATCACTCAACAACAGCAATGTGAT...GCACTCTAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR-3UTR CAA 90 bp | CACGTTGACAAAACACTAGCCAGTCTAAGTCCTGATCAAATAAAACATAGAAGTAGAGCACAAGGGCAATaGGCAAATACAGTCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: HVDKTLASLSPDQIKHRSRAQGQ*ANTVTF Trigger: GAAAGTGACTGTATTTGCCAATTGCCCTTGTGCTCT...ACTTCTATGTTTTATTTGATCAGGACTTAGACTGGCTAGTGTTTTGTCAACGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR GCA 72 bp | AATACATATCTTCCACCTTTAGAAGGTTCAGAATTGTaGACTCCTCCTCGCTGTTCCTTTGTAACTACAAAT | + |
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Preference number: 3 (lower is better) Translates to: NTYLPPLEGSEL*TPPRCSFVTTN Trigger: ATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAATTCTGAACCTTCTAAAGGTGGAAGATATGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CCA 72 bp | AACAAAGCATACACACAAAAGAAACATGTCATTTCTTaGAGTGTTGTTGATATAGCTAGTGACACTCCACTG | + |
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Preference number: 3 (lower is better) Translates to: NKAYTQKKHVIS*SVVDIASDTPL Trigger: CAGTGGAGTGTCACTAGCTATATCAACAACACTCCAAGAAATGACATGTTTCTTTTGTGTGTATGCTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 72 bp | GTGCTATTTATTTGTTGTTCATCACATTGCTGTTGTTaGGTGATCTTCATAATCCAAACATCCTCCAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: VLFICCSSHCCC*VIFIIQTSSSH Trigger: ATGACTGGAGGATGTTTGGATTATGAAGATCACTCAACAACAGCAATGTGATGAACAACAAATAAATAGCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR TCA 72 bp | ACCCATGTGTCTATAAATTGCAACTTCATATTAAACTaGTCCCCATTGCAAAGAAATCCTATGGATGAATCA | + |
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Preference number: 3 (lower is better) Translates to: THVSINCNFILN*SPLQRNPMDES Trigger: TGATTCATCCATAGGATTTCTTTGCAATGGGGATCAGTTTAATATGAAGTTGCAATTTATAGACACATGGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR GCA 72 bp | CACTTTCTTATTAAAACAATACCTTTTGTCAACCCATaGACCCTATTGGCTATACAATCCAGTCTTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: HFLIKTIPFVNP*TLLAIQSSLLK Trigger: TTTTAGAAGACTGGATTGTATAGCCAATAGGGTGCATGGGTTGACAAAAGGTATTGTTTTAATAAGAAAGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | CAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATCAAGGTCTCCAGTCCTaGGATGCCGGTGAGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QDSWSGEGWSLFPGASCDQGLQS*DAGEPQ Trigger: TTGTGGCTCACCGGCATCCCAGGACTGGAGACCTTG...ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | GATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCATGTAAAGAACTCCTCTaGGGACGGCAGCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: DSWSGEGWSLFPGASCDSCKELL*GRQPAP Trigger: TGGGGCTGGCTGCCGTCCTCAGAGGAGTTCTTTACA...TGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | CAGGATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTTGGCCAGCAGAGTGTaGATTGGAGGAGGAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: QDSWSGEGWSLFPGASCDLASRV*IGGGTW Trigger: CCAGGTTCCTCCTCCAATCCACACTCTGCTGGCCAA...ATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | GACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTTGAATGCCTCCTTCTCCGGCAGCAATGGCCGCTaGATCCAGGATCAACACCAG | + |
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Preference number: 4 (lower is better) Translates to: DGGSHLGNSSLCLNASFSGSNGR*IQDQHQ Trigger: CTGGTGTTGATCCTGGATTCAGCGGCCATTGCTGCC...GGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR GCA 90 bp | TTGTGCACTCCTCCTCGCTGTTCCTTTGTAACTACAAATGGTGGACCCAACGACTGGGCTGGTGCAGGCTaGGCTCTACCCTTACCACAG | + |
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Preference number: 4 (lower is better) Translates to: LCTPPRCSFVTTNGGPNDWAGAG*ALPLPQ Trigger: CTGTGGTAAGGGTAGAGCGCAGCCTGCACCAGCCCA...GTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | TTGTGCACTCCTCCTCGCTGTTCCTTTGTAACTACAAATGGTGGACCCAACGACTGTAAAGAACTCCTCTaGGGACGGCAGCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LCTPPRCSFVTTNGGPNDCKELL*GRQPAP Trigger: TGGGGCTGGCTGCCGTCCTCAGAGGAGTTCTTTACA...GTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCAAAATAGCAAAGAGCAAGGTCTCCAGTCCTaGGATGCCGGTGAGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: GRDGLSSLEPHVIQNSKEQGLQS*DAGEPQ Trigger: TTGTGGCTCACCGGCATCCCAGGACTGGAGACCTTG...CTCTTTGCTATTTTGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTTGAATGCCTCCTTCTCCCAGCAGAGTGTGGATTaGAGGAGGAACCTGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: DGGSHLGNSSLCLNASFSQQSVD*RRNLVT Trigger: GGTCACCAGGTTCCTCCTCCAATCCACACTCTGCTG...GGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | CATTGCAAAGAAATCCTATGGATGAATCAGGATTCATGGAGTGGGGAGGGATGGGTCCTGGGATGCCGGTaGGCCACAAAGAGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HCKEILWMNQDSWSGEGWVLGCR*ATKSWV Trigger: TACCCAGCTCTTTGTGGCTCACCGGCATCCCAGGAC...CCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | TTGTGCACTCCTCCTCGCTGTTCCTTTGTAACTACAAATGGTGGACCCAACGACCAGCAGAGTGTGGATTaGAGGAGGAACCTGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: LCTPPRCSFVTTNGGPNDQQSVD*RRNLVT Trigger: GGTCACCAGGTTCCTCCTCCAATCCACACTCTGCTG...GTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | GGGTTAGTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTAGTCCTGGGATGCCGGTaGGCCACAAAGAGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GLVVTPKRVINFSQNTDLVLGCR*ATKSWV Trigger: TACCCAGCTCTTTGTGGCTCACCGGCATCCCAGGAC...TAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTACTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR GCA 90 bp | GATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCAACACCAGAAAGCCAATaGTCAAGCCATAGACATTGT | + |
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Preference number: 4 (lower is better) Translates to: DSWSGEGWSLFPGASCDSTPESQ*SSHRHC Trigger: ACAATGTCTATGGCTTGAGCATTGGCTTTCTGGTGT...TGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | GGGTTAGTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTAGTGAGCACCATGCTGTaGCGCAGTGGATTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: GLVVTPKRVINFSQNTDLVSTML*RSGLQM Trigger: CATCTGCAATCCACTGCGTCACAGCATGGTGCTCAC...TAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTACTAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTGATCTAGAGTGCGCATCCAGGCCAATGTaGCCAGCACCAAACCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VVTPKRVINFSQNTDLECASRPM*PAPNQK Trigger: TTTCTGGTTTGGTGCTGGCCACATTGGCCTGGATGC...GCACTCTAGATCAGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTTGAATGCCTCCTTCTCCCATAGAAAATCAGAATaGCGCAGATATGAGACCCAC | + |
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Preference number: 4 (lower is better) Translates to: DGGSHLGNSSLCLNASFSHRKSE*RRYETH Trigger: GTGGGTCTCATATCTGCGCCATTCTGATTTTCTATG...GGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR GCA 90 bp | AATAGCAGTCTATGTTTGAATGCCTCCTTCTCCATGAATTTATGTGAGAGAGAATGGGCTGGTGCAGGCTaGGCTCTACCCTTACCACAG | + |
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Preference number: 4 (lower is better) Translates to: NSSLCLNASFSMNLCEREWAGAG*ALPLPQ Trigger: CTGTGGTAAGGGTAGAGCGCAGCCTGCACCAGCCCA...TTCTCTCTCACATAAATTCATGGAGAAGGAGGCATTCAAACATAGACTGCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GATTCATGGAGTGGGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCAACAGTAGCAAAGCAATaGATAAGAAACATTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DSWSGEGWSLFPGASCDSTVAKQ*IRNIWH Trigger: ATGCCAAATGTTTCTTATCCATTGCTTTGCTACTGT...TGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCCCACTCCATGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CAA 72 bp | GACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTaGAATGCCTCCTTCTCCATGAATTTATGTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: DGGSHLGNSSLC*NASFSMNLCER Trigger: TCTCTCACATAAATTCATGGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | TTGTGCACTCCTCCTCGCTGTTCCTTTGTAACTACAAATGGTGGACCCAACGACCAAAGAGCTGGGTACTaGACATACATTATGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LCTPPRCSFVTTNGGPNDQRAGY*TYIMKS Trigger: ACTTTTCATAATGTATGTTCAGTACCCAGCTCTTTG...GTCGTTGGGTCCACCATTTGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | TTATTAAAACAATACCTTTTGTCAACCCATGCACCCTATTGGCTATACAATCCAGGCAGCAATGGCCGCTaGATCCAGGATCAACACCAG | + |
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Preference number: 4 (lower is better) Translates to: LLKQYLLSTHAPYWLYNPGSNGR*IQDQHQ Trigger: CTGGTGTTGATCCTGGATTCAGCGGCCATTGCTGCC...TGGATTGTATAGCCAATAGGGTGCATGGGTTGACAAAAGGTATTGTTTTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR GCA 90 bp | CATTGCAAAGAAATCCTATGGATGAATCAGGATTCATGGAGTGGGGAGGGATGGACACCAGAAAGCCAATaGTCAAGCCATAGACATTGT | + |
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Preference number: 4 (lower is better) Translates to: HCKEILWMNQDSWSGEGWTPESQ*SSHRHC Trigger: ACAATGTCTATGGCTTGAGCATTGGCTTTCTGGTGT...CCATCCCTCCCCACTCCATGAATCCTGATTCATCCATAGGATTTCTTTGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | AATAGCAGTCTATGTTTGAATGCCTCCTTCTCCATGAATTTATGTGAGAGAGAATTGGCCAGCAGAGTGTaGATTGGAGGAGGAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSSLCLNASFSMNLCERELASRV*IGGGTW Trigger: CCAGGTTCCTCCTCCAATCCACACTCTGCTGGCCAA...TTCTCTCTCACATAAATTCATGGAGAAGGAGGCATTCAAACATAGACTGCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | CACGTTGACAAAACACTAGCCAGTCTAAGTCCTGATCAAATAAAACATAGAAGTGCATCCAGGCCAATGTaGCCAGCACCAAACCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: HVDKTLASLSPDQIKHRSASRPM*PAPNQK Trigger: TTTCTGGTTTGGTGCTGGCCACATTGGCCTGGATGC...ACTTCTATGTTTTATTTGATCAGGACTTAGACTGGCTAGTGTTTTGTCAACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGGATGGTCTCTCTTCCCTGGAGCCTCATGTGATTCAAAATAGCAAAGAGACAGTAGCAAAGCAATaGATAAGAAACATTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GRDGLSSLEPHVIQNSKETVAKQ*IRNIWH Trigger: ATGCCAAATGTTTCTTATCCATTGCTTTGCTACTGT...CTCTTTGCTATTTTGAATCACATGAGGCTCCAGGGAAGAGAGACCATCCCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGGGTTAGTAGTGACCCCGAAGCGTGTTATAAATTTCAGCCAAAACACTCATAGAAAATCAGAATaGCGCAGATATGAGACCCAC | + |
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Preference number: 4 (lower is better) Translates to: YKGLVVTPKRVINFSQNTHRKSE*RRYETH Trigger: GTGGGTCTCATATCTGCGCCATTCTGATTTTCTATG...AGTGTTTTGGCTGAAATTTATAACACGCTTCGGGGTCACTACTAACCCTTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| 3UTR CAA 72 bp | AAAAATACATATCTTCCACCTTTAGAAGGTTCAGAATaGTGCACTCCTCCTCGCTGTTCCTTTGTAACTACA | + |
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Preference number: 4 (lower is better) Translates to: KNTYLPPLEGSE*CTPPRCSFVTT Trigger: TGTAGTTACAAAGGAACAGCGAGGAGGAGTGCACAATTCTGAACCTTCTAAAGGTGGAAGATATGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CCA 90 bp | TTATTAAAACAATACCTTTTGTCAACCCATGCACCCTATTGGCTATACAATCCATGGATAAGAAACATTTaGCATAAGCAGGCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLKQYLLSTHAPYWLYNPWIRNI*HKQASR Trigger: CCTGGATGCCTGCTTATGCCAAATGTTTCTTATCCA...TGGATTGTATAGCCAATAGGGTGCATGGGTTGACAAAAGGTATTGTTTTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR TCA 90 bp | TACAACCCATGTGTCTATAAATTGCAACTTCATATTAAACTGATCCCCATTGCACAAAGAGCTGGGTACTaGACATACATTATGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: YNPCVYKLQLHIKLIPIAQRAGY*TYIMKS Trigger: ACTTTTCATAATGTATGTTCAGTACCCAGCTCTTTG...TGCAATGGGGATCAGTTTAATATGAAGTTGCAATTTATAGACACATGGGTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CAA 90 bp | GACGGGGGTTCCCATCTGGGAAATAGCAGTCTATGTTTGAATGCCTCCTTCTCCCCAGCAGAGTGTGGATaGGAGGAGGAACCTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: DGGSHLGNSSLCLNASFSPAECG*EEEPGD Trigger: GTCACCAGGTTCCTCCTCCAATCCACACTCTGCTGG...GGAGAAGGAGGCATTCAAACATAGACTGCTATTTCCCAGATGGGAACCCCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS-3UTR CAA 90 bp | ACAATACCTTTTGTCAACCCATGCACCCTATTGGCTATACAATCCAGTCTTCTACCAGCAGAGTGTGGATaGGAGGAGGAACCTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TIPFVNPCTLLAIQSSLLPAECG*EEEPGD Trigger: GTCACCAGGTTCCTCCTCCAATCCACACTCTGCTGG...TAGAAGACTGGATTGTATAGCCAATAGGGTGCATGGGTTGACAAAAGGTATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214841.3 ENSMUST00000215995.2 |
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| CDS TCA 72 bp | GCCATATGTGCAAGGTCTCCAGTCCTGGGATGCCGGTaGGCCACAAAGAGCTGGGTACTGAACATACATTAT | + |
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Preference number: 6 (lower is better) Translates to: AICARSPVLGCR*ATKSWVLNIHY Trigger: ATAATGTATGTTCAGTACCCAGCTCTTTGTGGCTCACCGGCATCCCAGGACTGGAGACCTTGCACATATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098221.2 ENSMUST00000214841.3 ENSMUST00000215995.2 |
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