Pregenerated sensors for OLFR553 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073972Ensembl transcript IDs: ENSMUST00000098222.2, ENSMUST00000216776.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGTGCTCTCAGGAGATGAGCCCTTGGTGGAGCAGGAGCATAAATaGAGCCACTTTTGTTATCTTTATCCTCAGCCATCCAATTCCATA | + |
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Preference number: 1 (lower is better) Translates to: WVLSGDEPLVEQEHK*SHFCYLYPQPSNSI Trigger: TATGGAATTGGATGGCTGAGGATAAAGATAACAAAAGTGGCTGCATTTATGCTCCTGCTCCACCAAGGGCTCATCTCCTGAGAGCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 90 bp | AATAGTGGAACTAGGTCAAAATTTCCCCCAACATTCCTCCTACCATaGGGTTTGAGTGTTATAGTCCTTTGTCATCTCCTATGCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: NSGTRSKFPPTFLLP*GLSVIVLCHLLCLS Trigger: GCTCAGGCATAGGAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGGAAATTTTGACCTAGTTCCACTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR GCA 90 bp | CCTTCTCTCCTTCAGGATCTTAGATTCACACCGACAGAAAATGCATaGTGGAACAGAATAGATGTTAGGGCTGCTTTTACACTCTTATCC | + |
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Preference number: 1 (lower is better) Translates to: PSLLQDLRFTPTENA*WNRIDVRAAFTLLS Trigger: GGATAAGAGTGTAAAAGCAGCCCTAACATCTATTCTGTTCCAGCATGCATTTTCTGTCGGTGTGAATCTAAGATCCTGAAGGAGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR TCA 90 bp | TCCATCCCATGGTTACCTCCTTTCCTTTACCACTTGTTATCTAAGTaGAGCTGCTGCCCCTCACATGTGTTATTTTCTGAAAGAGAATCT | + |
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Preference number: 1 (lower is better) Translates to: SIPWLPPFLYHLLSK*SCCPSHVLFSERES Trigger: AGATTCTCTTTCAGAAAATAACACATGTGAGGGGCAGCAGCTTCACTTAGATAACAAGTGGTAAAGGAAAGGAGGTAACCATGGGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 90 bp | TCTCTCCTTCAGGATCTTAGATTCACACCGACAGAAAATGCATGCTaGAACAGAATAGATGTTAGGGCTGCTTTTACACTCTTATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLLQDLRFTPTENAC*NRIDVRAAFTLLSS Trigger: TGAGGATAAGAGTGTAAAAGCAGCCCTAACATCTATTCTGTTCCAGCATGCATTTTCTGTCGGTGTGAATCTAAGATCCTGAAGGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR TCA 90 bp | CATTTACAAGAAGAGGGACCAGGCTTTGATTGTATGTCCAAAGTCTaGCATACTATTCAATGTCCATTTCTACCAGTTATTATTACACAG | + |
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Preference number: 1 (lower is better) Translates to: HLQEEGPGFDCMSKV*HTIQCPFLPVIITQ Trigger: CTGTGTAATAATAACTGGTAGAAATGGACATTGAATAGTATGTCAGACTTTGGACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTCACTATTGCGTCTGGTaGGTGCTCTCAGGAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: HVVPMETREEHGSLGTEIHYCVW*VLSGDE Trigger: CTCATCTCCTGAGAGCACCCACCAGACGCAATAGTG...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAACATTCCTCCTACCATGGGGTTTGAGTGTTATAGTCCTTTGTCATCTCCAGTACAGGAGACTATaGTCATATTTTCCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPTFLLPWGLSVIVLCHLQYRRL*SYFPSL Trigger: GAGAGAAGGAAAATATGATCATAGTCTCCTGTACTG...GAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAACATTCCTCCTACCATGGGGTTTGAGTGTTATAGTCCTTTGTCATCTCCCGACAGAAAATGCATaGTGGAACAGAATAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: PPTFLLPWGLSVIVLCHLPTENA*WNRIDV Trigger: AACATCTATTCTGTTCCAGCATGCATTTTCTGTCGG...GAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAACATTCCTCCTACCATGGGGTTTGAGTGTTATAGTCCTTTGTCATCTCAGAGTCAGGAGTGACTaGCTTTTCAAATGCATTACT | + |
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Preference number: 2 (lower is better) Translates to: PPTFLLPWGLSVIVLCHLRVRSD*LFKCIT Trigger: AGTAATGCATTTGAAAAGGCAGTCACTCCTGACTCT...GAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTCTTTGTCATCTCCTATaGCTGAGCCAACCTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: HVVPMETREEHGSLGTEILCHLL*LSQPKI Trigger: GATTTTAGGTTGGCTCAGGCATAGGAGATGACAAAG...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTTTATCTAGGAAGAAATaGCTAGCGTTGGATTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: HVVPMETREEHGSLGTEILSRKK*LALDCA Trigger: CGCACAATCCAACGCTAGGCATTTCTTCCTAGATAA...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 90 bp | TTTCCAAGGTTTGTCCACACAAGGTCTCCATTATTCTCTTCACCTTaGACCTTTTATTACACATCCCCCTTGATGTCCATCCCATGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FPRFVHTRSPLFSSP*TFYYTSPLMSIPWL Trigger: TAACCATGGGATGGACATCAAGGGGGATGTGTAATAAAAGGTCAAAGGTGAAGAGAATAATGGAGACCTTGTGTGGACAAACCTTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGAATTCTTCAGAGCTCATTCCCTTCTATACTGTTGAAACAAACCCCTTAATTACACATCCCCCTTaGTGTCCATCCCATGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: MENSSELIPFYTVETNPLITHPP*CPSHGY Trigger: GTAACCATGGGATGGACATCAAGGGGGATGTGTAAT...TAAGGGGTTTGTTTCAACAGTATAGAAGGGAATGAGCTCTGAAGAATTCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 90 bp | TCTCCATTATTCTCTTCACCTTTGACCTTTTATTACACATCCCCCTaGATGTCCATCCCATGGTTACCTCCTTTCCTTTACCACTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SPLFSSPLTFYYTSP*MSIPWLPPFLYHLL Trigger: TAACAAGTGGTAAAGGAAAGGAGGTAACCATGGGATGGACATCAAGGGGGATGTGTAATAAAAGGTCAAAGGTGAAGAGAATAATGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCTTCTGTATTCCTCATTTGGCTCTAGGAGATGTGGTATATTCCATGTCGATCTAGAAGTATCATaGGCTTCCTTCCTATCTACA | + |
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Preference number: 2 (lower is better) Translates to: LSLLYSSFGSRRCGIFHVDLEVS*ASFLST Trigger: TGTAGATAGGAAGGAAGCCCATGATACTTCTAGATC...GACATGGAATATACCACATCTCCTAGAGCCAAATGAGGAATACAGAAGAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTAATGGAGGAATGGCTTaGTTTAAAGACTTTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: HVVPMETREEHGSLGTEINGGMA*FKDFNS Trigger: GGAGTTAAAGTCTTTAAACCAAGCCATTCCTCCATT...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTTGATGTCCATCCCATaGTTACCTCCTTTCCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSLMSIP*LPPFLY Trigger: GTAAAGGAAAGGAGGTAACCATGGGATGGACATCAA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCACATGAACCTACACAAATACCATATCAATGTCTCCTCATTCAGTCTTTTCACAGATTTCCAGCTCTaGGAAGTTAAGTGCGTATTT | + |
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Preference number: 2 (lower is better) Translates to: CHMNLHKYHINVSSFSLFTDFQL*EVKCVF Trigger: AAATACGCACTTAACTTCTCAGAGCTGGAAATCTGT...GAAAAGACTGAATGAGGAGACATTGATATGGTATTTGTGTAGGTTCATGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTCCCTTCTATACTGTTaGAACAAACCCCTTAATCAC | + |
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Preference number: 2 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSSLLYC*NKPLNH Trigger: GTGATTAAGGGGTTTGTTTCAACAGTATAGAAGGGA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCACATGAACCTACACAAATACCATATCAATGTCTCCTCATTCAGTCTTTTCGAGCAGGAGCATAAATaGAGCCACTTTTGTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: CHMNLHKYHINVSSFSLFEQEHK*SHFCYL Trigger: AAGATAACAAAAGTGGCTGCATTTATGCTCCTGCTC...GAAAAGACTGAATGAGGAGACATTGATATGGTATTTGTGTAGGTTCATGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATCACCACTATTTTCATTTACAAGAAGAGGGACCAGGCTTTGATTGTATGTGATGGGTTTAGCCTATaGGAGACTCAACAGATTATC | + |
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Preference number: 2 (lower is better) Translates to: MITTIFIYKKRDQALIVCDGFSL*ETQQII Trigger: GATAATCTGTTGAGTCTCCCATAGGCTAAACCCATC...ACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATGAAAATAGTGGTGATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACATGAACCTACACAAATACCATATCAATGTCTCCTCATTCAGTCTTTTCTTAGTCAGATCTCCATaGAGAATTCTTCAGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: CHMNLHKYHINVSSFSLFLVRSP*RILQSS Trigger: TGAGCTCTGAAGAATTCTCCATGGAGATCTGACTAA...GAAAAGACTGAATGAGGAGACATTGATATGGTATTTGTGTAGGTTCATGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCACATGAACCTACACAAATACCATATCAATGTCTCCTCATTCAGTCTTTTCTCCCCAAAAATGACATaGAAGATTTCCAAGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: CHMNLHKYHINVSSFSLFSPKMT*KISKVC Trigger: ACAAACCTTGGAAATCTTTCATGTCATTTTTGGGGA...GAAAAGACTGAATGAGGAGACATTGATATGGTATTTGTGTAGGTTCATGTGGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTTAGAGATAGATGAATaGAATCAAATTTGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSLEIDE*NQIWAW Trigger: CCAGGCCCAAATTTGATTTCATTCATCTATCTCTAA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR GCA 90 bp | ATTATTACACAGCCAAAGTTAAGACATTTGTGCCACATGAACCTACACAAATACCACACCGACAGAAAATaGATGCTGGAACAGAATAGA | + |
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Preference number: 2 (lower is better) Translates to: IITQPKLRHLCHMNLHKYHTDRK*MLEQNR Trigger: TCTATTCTGTTCCAGCATGCATTTTCTGTCGGTGTG...GTATTTGTGTAGGTTCATGTGGCACAAATGTCTTAACTTTGGCTGTGTAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATCACCACTATTTTCATTTACAAGAAGAGGGACCAGGCTTTGATTGTATGTACAGAAAATGCATGCTaGAACAGAATAGATGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: MITTIFIYKKRDQALIVCTENAC*NRIDVR Trigger: CCTAACATCTATTCTGTTCCAGCATGCATTTTCTGT...ACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATGAAAATAGTGGTGATCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTACAATCCAGAGTGTTaGTTATGGAAAGAAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSYNPEC*LWKETV Trigger: AACTGTTTCTTTCCATAACCAACACTCTGGATTGTA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 90 bp | ATAATGATCACCACTATTTTCATTTACAAGAAGAGGGACCAGGCTTaGATTGTATGTCCAAAGTCTGACATACTATTCAATGTCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: IMITTIFIYKKRDQA*IVCPKSDILFNVHF Trigger: GAAATGGACATTGAATAGTATGTCAGACTTTGGACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATGAAAATAGTGGTGATCATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATTACACAGCCAAAGTTAAGACATTTGTGCCACATGAACCTACACAAATACGGATCTCAGGTTTTATaGATATATGCTTATTGCACT | + |
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Preference number: 2 (lower is better) Translates to: IITQPKLRHLCHMNLHKYGSQVL*IYAYCT Trigger: AGTGCAATAAGCATATATCCATAAAACCTGAGATCC...GTATTTGTGTAGGTTCATGTGGCACAAATGTCTTAACTTTGGCTGTGTAATAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 72 bp | ATTGCGTCTGGTGGGTGCTCTCAGGAGATGAGCCCTTaGTGGAGCAGGAGCATAAATGCAGCCACTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: IASGGCSQEMSP*WSRSINAATFV Trigger: AACAAAAGTGGCTGCATTTATGCTCCTGCTCCACCAAGGGCTCATCTCCTGAGAGCACCCACCAGACGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR GCA 72 bp | TCAGGAGATGAGCCCTTGGTGGAGCAGGAGCATAAATaGAGCCACTTTTGTTATCTTTATCCTCAGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: SGDEPLVEQEHK*SHFCYLYPQPS Trigger: GGATGGCTGAGGATAAAGATAACAAAAGTGGCTGCATTTATGCTCCTGCTCCACCAAGGGCTCATCTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR GCA 72 bp | GCCTATGGGAGACTCAACAGATTATCTAGGAAGAAATaGCTAGCGTTGGATTGTGCGCAGCTATTCTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: AYGRLNRLSRKK*LALDCAQLFCH Trigger: ATGACAGAATAGCTGCGCACAATCCAACGCTAGGCATTTCTTCCTAGATAATCTGTTGAGTCTCCCATAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCCAACATTCCTCCTACCATGGGGTTTGAGTGTTATAGTCCTTTGTCATCTCGTCTACCATTTAGAGTaGACTGATTACCCTTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PPTFLLPWGLSVIVLCHLVYHLE*TDYPCH Trigger: ATGACAAGGGTAATCAGTCAACTCTAAATGGTAGAC...GAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 72 bp | ATGTGGGTAGTTTACTGGGAATTGAATCCCATTCTCTaGAAGAGCACTCAGTATTCTTTATTGCCCGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: MWVVYWELNPIL*KSTQYSLLPEP Trigger: TGGCTCGGGCAATAAAGAATACTGAGTGCTCTTCCAGAGAATGGGATTCAATTCCCAGTAAACTACCCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 72 bp | CAGGATCTTAGATTCACACCGACAGAAAATGCATGCTaGAACAGAATAGATGTTAGGGCTGCTTTTACACTC | + |
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Preference number: 3 (lower is better) Translates to: QDLRFTPTENAC*NRIDVRAAFTL Trigger: GAGTGTAAAAGCAGCCCTAACATCTATTCTGTTCCAGCATGCATTTTCTGTCGGTGTGAATCTAAGATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATGAGCCCTTGGTGGAGCAGGAGCATAAATGCAGCCACTTTTGTTATCTTTTCTTTTCTCAGTAACTaGATTCAAGTTTGGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: EMSPWWSRSINAATFVIFSFLSN*IQVWHC Trigger: ACAGTGCCAAACTTGAATCAAGTTACTGAGAAAAGA...AAAGATAACAAAAGTGGCTGCATTTATGCTCCTGCTCCACCAAGGGCTCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR TCA 72 bp | TGGTTACCTCCTTTCCTTTACCACTTGTTATCTAAGTaGAGCTGCTGCCCCTCACATGTGTTATTTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: WLPPFLYHLLSK*SCCPSHVLFSE Trigger: TTCAGAAAATAACACATGTGAGGGGCAGCAGCTTCACTTAGATAACAAGTGGTAAAGGAAAGGAGGTAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR GCA 72 bp | CTTCAGGATCTTAGATTCACACCGACAGAAAATGCATaGTGGAACAGAATAGATGTTAGGGCTGCTTTTACA | + |
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Preference number: 3 (lower is better) Translates to: LQDLRFTPTENA*WNRIDVRAAFT Trigger: TGTAAAAGCAGCCCTAACATCTATTCTGTTCCAGCATGCATTTTCTGTCGGTGTGAATCTAAGATCCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CCA 72 bp | ACCTTTTATTACACATCCCCCTTGATGTCCATCCCATaGTTACCTCCTTTCCTTTACCACTTGTTATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: TFYYTSPLMSIP*LPPFLYHLLSK Trigger: CTTAGATAACAAGTGGTAAAGGAAAGGAGGTAACCATGGGATGGACATCAAGGGGGATGTGTAATAAAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CAA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTTTACAATCCAGAGTGTaGGTTATGGAAAGAAACAGT | + |
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Preference number: 3 (lower is better) Translates to: HVVPMETREEHGSLGTEILQSRV*VMERNS Trigger: ACTGTTTCTTTCCATAACCAACACTCTGGATTGTAA...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTCTTCTGTATTCCTCATTTGGCTCTAGGAGATGTGGTATATTCCATGTCGTCAATAAATATCATTaGAATAGGGGCAATCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LSLLYSSFGSRRCGIFHVVNKYH*NRGNPG Trigger: TCCTGGATTGCCCCTATTCAAATGATATTTATTGAC...GACATGGAATATACCACATCTCCTAGAGCCAAATGAGGAATACAGAAGAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR-3UTR CAA 90 bp | ATGATCACCACTATTTTCATTTACAAGAAGAGGGACCAGGCTTTGATTGTATGTTTCTGTATTCCTCATTaGGCTCTAGGAGATGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: MITTIFIYKKRDQALIVCFCIPH*ALGDVV Trigger: TACCACATCTCCTAGAGCCAAATGAGGAATACAGAA...ACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATGAAAATAGTGGTGATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR TCA 72 bp | GAAGAGGGACCAGGCTTTGATTGTATGTCCAAAGTCTaGCATACTATTCAATGTCCATTTCTACCAGTTATT | + |
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Preference number: 3 (lower is better) Translates to: EEGPGFDCMSKV*HTIQCPFLPVI Trigger: AATAACTGGTAGAAATGGACATTGAATAGTATGTCAGACTTTGGACATACAATCAAAGCCTGGTCCCTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR GCA 72 bp | CCAGTTATTATTACACAGCCAAAGTTAAGACATTTGTaGCACATGAACCTACACAAATACCATATCAATGTC | + |
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Preference number: 3 (lower is better) Translates to: PVIITQPKLRHL*HMNLHKYHINV Trigger: GACATTGATATGGTATTTGTGTAGGTTCATGTGGCACAAATGTCTTAACTTTGGCTGTGTAATAATAACTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAACATTCCTCCTACCATGGGGTTTGAGTGTTATAGTCCTTTGTCATCTCAGCGGTCGAAAGCCATaGCAAGAAAGATGCCCGACT | + |
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Preference number: 4 (lower is better) Translates to: PPTFLLPWGLSVIVLCHLSGRKP*QERCPT Trigger: AGTCGGGCATCTTTCTTGCCATGGCTTTCGACCGCT...GAGATGACAAAGGACTATAACACTCAAACCCCATGGTAGGAGGAATGTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR TCA 90 bp | GAGATGAGCCCTTGGTGGAGCAGGAGCATAAATGCAGCCACTTTTGTTATCTTTGAAAGAGCTGGGTACTaGGCAGGCATTATTAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: EMSPWWSRSINAATFVIFERAGY*AGIIRN Trigger: GTTTCTAATAATGCCTGCTCAGTACCCAGCTCTTTC...AAAGATAACAAAAGTGGCTGCATTTATGCTCCTGCTCCACCAAGGGCTCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTACAGTACAGGAGACTATGATCATATTTTCCTTCTCTCCTTCAGGATCCACAGCATAGACAACTaGGTTGAGGATGGGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SGYSTGDYDHIFLLSFRIHSIDN*VEDGWD Trigger: ATCCCACCCATCCTCAACCCAGTTGTCTATGCTGTG...GATCCTGAAGGAGAGAAGGAAAATATGATCATAGTCTCCTGTACTGTACCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR TCA 90 bp | ATGATCACCACTATTTTCATTTACAAGAAGAGGGACCAGGCTTTGATTGTATGTATCCTGGGATGCCAGTaGGCCAGAAAGAGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: MITTIFIYKKRDQALIVCILGCQ*ARKSWV Trigger: TACCCAGCTCTTTCTGGCTCACTGGCATCCCAGGAT...ACATACAATCAAAGCCTGGTCCCTCTTCTTGTAAATGAAAATAGTGGTGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR GCA 90 bp | TGCCACATGAACCTACACAAATACCATATCAATGTCTCCTCATTCAGTCTTTTCCGTCTAGACCAATGCTaGAGGCACCAAACCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: CHMNLHKYHINVSSFSLFRLDQC*RHQTRR Trigger: TCTTCTGGTTTGGTGCCTGCAGCATTGGTCTAGACG...GAAAAGACTGAATGAGGAGACATTGATATGGTATTTGTGTAGGTTCATGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR GCA 90 bp | TCAGGGTACAGTACAGGAGACTATGATCATATTTTCCTTCTCTCCTTCAGGATCTTTTGTGTCACCACATaGCAAAGTGACCACAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGYSTGDYDHIFLLSFRIFCVTT*QSDHSH Trigger: ATGGCTGTGGTCACTTTGGCATGTGGTGACACAAAA...GATCCTGAAGGAGAGAAGGAAAATATGATCATAGTCTCCTGTACTGTACCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTACCTGGCATCAGAGGTaGACAATCCTAACACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSTWHQR*TILTQL Trigger: GAGCTGTGTTAGGATTGTCCACCTCTGATGCCAGGT...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 72 bp | TTCTCTTCACCTTTGACCTTTTATTACACATCCCCCTaGATGTCCATCCCATGGTTACCTCCTTTCCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: FSSPLTFYYTSP*MSIPWLPPFLY Trigger: GTAAAGGAAAGGAGGTAACCATGGGATGGACATCAAGGGGGATGTGTAATAAAAGGTCAAAGGTGAAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTACAGTACAGGAGACTATGATCATATTTTCCTTCTCTCCTTCAGGATCGTAAGTACTGATGTATaGTGTAGTGGGTCACAGATG | + |
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Preference number: 4 (lower is better) Translates to: SGYSTGDYDHIFLLSFRIVSTDV*CSGSQM Trigger: CATCTGTGACCCACTACACCATACATCAGTACTTAC...GATCCTGAAGGAGAGAAGGAAAATATGATCATAGTCTCCTGTACTGTACCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTGGGTTGAGGATGGGTaGGATGAGGAGGTAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSWVEDG*DEEVKV Trigger: AACTTTTACCTCCTCATCCCACCCATCCTCAACCCA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR TCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTGGGCATTGTAGAAGTTaGCAGGACCAAGTCAATAAC | + |
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Preference number: 4 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSGHCRS*QDQVNN Trigger: GTTATTGACTTGGTCCTGTCAACTTCTACAATGCCC...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR TCA 90 bp | CTTTACCATCTCACAGGACCTATTCCTGTTTTATTTTGCCTCACTGCATATTCTTGGACAAAGAACATCTaGACTAAGCAGGCGTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LYHLTGPIPVLFCLTAYSWTKNI*TKQASR Trigger: TCTAGACGCCTGCTTAGTTCAGATGTTCTTTGTCCA...AGAATATGCAGTGAGGCAAAATAAAACAGGAATAGGTCCTGTGAGATGGTAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR TCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTTTCCATACAGATTATTaGCTTTTGTGTCACCACATG | + |
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Preference number: 4 (lower is better) Translates to: HVVPMETREEHGSLGTEIFHTDY*LLCHHM Trigger: CATGTGGTGACACAAAAGTCAATAATCTGTATGGAA...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR GCA 90 bp | CATGTAGTACCTATGGAGACCAGAGAAGAGCATGGATCTCTTGGGACTGAAATTCCAGACTTAATAATATaGAAAAGTCTCTCTCGGATC | + |
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Preference number: 4 (lower is better) Translates to: HVVPMETREEHGSLGTEIPDLII*KSLSRI Trigger: GATCCGAGAGAGACTTTTGCATATTATTAAGTCTGG...AATTTCAGTCCCAAGAGATCCATGCTCTTCTCTGGTCTCCATAGGTACTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTACAGTACAGGAGACTATGATCATATTTTCCTTCTCTCCTTCAGGATCTTGGCCAAAAGAATATaGATATGCGAAGGCACATTG | + |
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Preference number: 4 (lower is better) Translates to: SGYSTGDYDHIFLLSFRILAKRI*ICEGTL Trigger: CAATGTGCCTTCGCATATCCATATTCTTTTGGCCAA...GATCCTGAAGGAGAGAAGGAAAATATGATCATAGTCTCCTGTACTGTACCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 72 bp | AGACTCAACAGATTATCTAGGAAGAAATGCCTAGCGTaGGATTGTGCGCAGCTATTCTGTCATAAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RLNRLSRKKCLA*DCAQLFCHKVL Trigger: AAGAACTTTATGACAGAATAGCTGCGCACAATCCAACGCTAGGCATTTCTTCCTAGATAATCTGTTGAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 72 bp | ATTACAATCCAGAGTGTTGGTTATGGAAAGAAACAGTaGCATGAGGATGAGGCAACCATTTGTTGGATTAAG | + |
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Preference number: 4 (lower is better) Translates to: ITIQSVGYGKKQ*HEDEATICWIK Trigger: CTTAATCCAACAAATGGTTGCCTCATCCTCATGCAACTGTTTCTTTCCATAACCAACACTCTGGATTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 72 bp | AAAATGTATGGTAATCTTCTATTACAATCCAGAGTGTaGGTTATGGAAAGAAACAGTTGCATGAGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: KMYGNLLLQSRV*VMERNSCMRMR Trigger: CCTCATCCTCATGCAACTGTTTCTTTCCATAACCAACACTCTGGATTGTAATAGAAGATTACCATACATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| 3UTR CAA 72 bp | CTACCAGTTATTATTACACAGCCAAAGTTAAGACATTaGTGCCACATGAACCTACACAAATACCATATCAAT | + |
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Preference number: 4 (lower is better) Translates to: LPVIITQPKLRH*CHMNLHKYHIN Trigger: ATTGATATGGTATTTGTGTAGGTTCATGTGGCACAAATGTCTTAACTTTGGCTGTGTAATAATAACTGGTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216776.2 |
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| CDS TCA 72 bp | CGAAGGCACATTGTGGCCGAAACGATGGGTGAGAGATaGAACAGCAATAGGAATGTAGAAGACAAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: RRHIVAETMGER*NSNRNVEDKDG Trigger: GCCATCCTTGTCTTCTACATTCCTATTGCTGTTTCATCTCTCACCCATCGTTTCGGCCACAATGTGCCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098222.2 ENSMUST00000216776.2 |
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| CDS CAA 72 bp | AAGTTGGCCAAAAGAATATGGATATGCGAAGGCACATaGTGGCCGAAACGATGGGTGAGAGATGAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: KLAKRIWICEGT*WPKRWVRDETA Trigger: TGCTGTTTCATCTCTCACCCATCGTTTCGGCCACAATGTGCCTTCGCATATCCATATTCTTTTGGCCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098222.2 ENSMUST00000216776.2 |
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