Pregenerated sensors for OLFR552 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073973Ensembl transcript IDs: ENSMUST00000215712.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCACCAGTGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATaGCCCAGTGTAGGGGAATGCCAGAGCAGGGAGGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QAPVGGEALGPVKAL*PSVGECQSREVGVG Trigger: ACCCACTCCCACCTCCCTGCTCTGGCATTCCCCTACACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCACTGGTGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 90 bp | GAGGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTGTAGGGGAATaGCAGAGCAGGGAGGTGGGAGTGGGTCGGTGGGTAGAGGAACAC | + |
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Preference number: 1 (lower is better) Translates to: EALGPVKALCPSVGE*QSREVGVGRWVEEH Trigger: GTGTTCCTCTACCCACCGACCCACTCCCACCTCCCTGCTCTGGCATTCCCCTACACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 90 bp | AAACCCCAACAGTGGGAGAGTCTGTCTGAATCTGGACCCCAGCTGTaGGTGAGTGGTGAGGATTCCTTCATTGGTGTACTGCTGATGCTT | + |
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Preference number: 1 (lower is better) Translates to: KPQQWESLSESGPQL*VSGEDSFIGVLLML Trigger: AAGCATCAGCAGTACACCAATGAAGGAATCCTCACCACTCACTCACAGCTGGGGTCCAGATTCAGACAGACTCTCCCACTGTTGGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 90 bp | TGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATaGCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: WSMCPSYRLGHLLDI*PGEVLLDPPVVLCP Trigger: TGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 90 bp | CTGGGGCATATACAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGHIQFACPMGLSFQ*WPTRPSFDTYAARV Trigger: GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTGTATATGCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 90 bp | TGGTGTCAGCGTTTGGAAGCTGATTATGGAGTGGATCCCTGGATATaGCAGTCTCTACATGGTCCATCCTTTCGTCTCAACTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQRLEADYGVDPWI*QSLHGPSFRLNSKL Trigger: AAGTTTGGAGTTGAGACGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCTTCCAAACGCTGACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 90 bp | AATAAAATCTTGCTAGTGTGTGCAATGGTGTCAGCGTTTGGAAGCTaGTTATGGAGTGGATCCCTGGATATGGCAGTCTCTACATGGTCC | + |
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Preference number: 1 (lower is better) Translates to: NKILLVCAMVSAFGS*LWSGSLDMAVSTWS Trigger: GGACCATGTAGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCTTCCAAACGCTGACACCATTGCACACACTAGCAAGATTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 90 bp | AATCACATCAAGATAAAAGTAAGCATGAAGATCTTGGCAGCCCTCTaGTTCCTAACACACCATTTTCAATTCCAACAAACTGCCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: NHIKIKVSMKILAAL*FLTHHFQFQQTACS Trigger: AGAGCAGGCAGTTTGTTGGAATTGAAAATGGTGTGTTAGGAAGCAGAGGGCTGCCAAGATCTTCATGCTTACTTTTATCTTGATGTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 90 bp | ACGTTACTGAAGGCAGGAATAAGAATTCCAAAATGTCGACAAGTTTaGATCCAGGCGGGTGTCATTTGTCAATGGCTAGTTATTTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: TLLKAGIRIPKCRQV*IQAGVICQWLVIFK Trigger: TTTAAAAATAACTAGCCATTGACAAATGACACCCGCCTGGATTCAAACTTGTCGACATTTTGGAATTCTTATTCCTGCCTTCAGTAACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 90 bp | ACTGTGTTTTTGTACTATTATGAATTGTACTGTAAATATCTGATATaGAGGATATCTGGTATGCAACTCCTAAAGGGGTCACAACCCACA | + |
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Preference number: 1 (lower is better) Translates to: TVFLYYYELYCKYLI*RISGMQLLKGSQPT Trigger: TGTGGGTTGTGACCCCTTTAGGAGTTGCATACCAGATATCCTGCATATCAGATATTTACAGTACAATTCATAATAGTACAAAAACACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCGTGGGAGTGGGTCGGTaGGTAGAGGAACACCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: EFLCECVTSLRMMPSRSIVGVGR*VEEHPH Trigger: ATGAGGGTGTTCCTCTACCCACCGACCCACTCCCAC...GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAACTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATGTGGGAGAGTCTGTCTaGATCTGGACCCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LNSKLCLCNSFHGCFVPNVGESV*IWTPAV Trigger: CACAGCTGGGGTCCAGATTCAGACAGACTCTCCCAC...ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTTTCAATAAAATCTTGCTAGTGTGTGCAATGGTGTCAGCGTTTGGAAGCAGGGCTTGCCTGAGATaGTCTATGTGTGTCGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GPFNKILLVCAMVSAFGSRACLR*SMCVVR Trigger: CCTGACGACACACATAGACCATCTCAGGCAAGCCCT...GCTTCCAAACGCTGACACCATTGCACACACTAGCAAGATTTTATTGAAAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR TCA 90 bp | CTATGTTTTAGCATTCTCGTTCTTTTCCCATACACTAAACTCTGGGATCGAAGTGACCCCAGCTGTGAGTaGGTGGTGAGGATTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LCFSILVLFPYTKLWDRSDPSCE*VVRIPS Trigger: TGAAGGAATCCTCACCACTCACTCACAGCTGGGGTC...ACTTCGATCCCAGAGTTTAGTGTATGGGAAAAGAACGAGAATGCTAAAACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 90 bp | CACCAGAAGAGAGCATCTAACTCCATTACAGATGTTTGCTGGGAATaGATCTCAAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACTGCT | + |
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Preference number: 2 (lower is better) Translates to: HQKRASNSITDVCWE*ISRPLEEQSVLLTA Trigger: AGCAGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAATTCCCAGCAAACATCTGTAATGGAGTTAGATGCTCTCTTCTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAAATTGAGAACCAATaGCCTATATACTCTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: EFLCECVTSLRMMPSRSIQIENQ*PIYSCL Trigger: CAGACAAGAGTATATAGGGCATTGGTTCTCAATTTG...GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCTTTAAATCCAGCATCCCAACTTTAAGATGCATGTGTTCCAAGCCCCTAATCATTGTCACTCTCTaGAGACTGAAGGAGGTCATA | + |
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Preference number: 2 (lower is better) Translates to: LLFKSSIPTLRCMCSKPLIIVTL*RLKEVI Trigger: TATGACCTCCTTCAGTCTTCAGAGAGTGACAATGAT...TAGGGGCTTGGAACACATGCATCTTAAAGTTGGGATGCTGGATTTAAAGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR TCA 90 bp | CTATGTTTTAGCATTCTCGTTCTTTTCCCATACACTAAACTCTGGGATCGAAGTATGTTTGCTGGGAATTaGTCTCAAGACCTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LCFSILVLFPYTKLWDRSMFAGN*SQDLWK Trigger: CTTCCAAAGGTCTTGAGATCAATTCCCAGCAAACAT...ACTTCGATCCCAGAGTTTAGTGTATGGGAAAAGAACGAGAATGCTAAAACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATTGGTGTACTGCTGATGCTTATCCAGGTCCTAAATCGATAGATTACATATCAATTCCAACAAACTaGCTGCTCTCTTCTACTGTC | + |
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Preference number: 2 (lower is better) Translates to: LHWCTADAYPGPKSIDYISIPTN*LLSSTV Trigger: GACAGTAGAAGAGAGCAGGCAGTTTGTTGGAATTGA...TATGTAATCTATCGATTTAGGACCTGGATAAGCATCAGCAGTACACCAATGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | GGTCCTGTGAAGGCTCTATGCCCCAGTGTAGGGGAATaGCAGAGCAGGGAGGTGGGAGTGGGTCGGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GPVKALCPSVGE*QSREVGVGRWV Trigger: TACCCACCGACCCACTCCCACCTCCCTGCTCTGGCATTCCCCTACACTGGGGCATAGAGCCTTCACAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | GTGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATaGCCCAGTGTAGGGGAATGCCAGAGCAGGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: VGGEALGPVKAL*PSVGECQSREV Trigger: CACCTCCCTGCTCTGGCATTCCCCTACACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | ATGGCCTTGCCAGGCACCAGTGGGAGGAGAGGCCCTTaGTCCTGTGAAGGCTCTATGCCCCAGTGTAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: MALPGTSGRRGP*SCEGSMPQCRG Trigger: TCCCCTACACTGGGGCATAGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCACTGGTGCCTGGCAAGGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | CAGTGGGAGAGTCTGTCTGAATCTGGACCCCAGCTGTaGGTGAGTGGTGAGGATTCCTTCATTGGTGTACTG | + |
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Preference number: 3 (lower is better) Translates to: QWESLSESGPQL*VSGEDSFIGVL Trigger: CAGTACACCAATGAAGGAATCCTCACCACTCACTCACAGCTGGGGTCCAGATTCAGACAGACTCTCCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAACTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATAAGCTGAGGATGGCCTaGCCAGGCACCAGTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LNSKLCLCNSFHGCFVPNKLRMA*PGTSGR Trigger: CCTCCCACTGGTGCCTGGCAAGGCCATCCTCAGCTT...ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | GGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTaGATATATGCCCAGGAGAGGTATTGCTGGATCCTC | + |
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Preference number: 3 (lower is better) Translates to: GACVLLTGWDIF*IYAQERYCWIL Trigger: GAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | GTTCCACCGATAGGGTTGCAGATCTCTTTAGCTCCTTaGATACTTTCTCTAGCTCCTCCACTGGGGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQISLAP*ILSLAPPLGFL Trigger: CAGGAACCCCAGTGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTATCGGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | TGTCACATGCTATTCAGAGTGTTTAATGAGAAAAGCTaGGGATGGCCTTGCCAGGCACCAGTGGGAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: CHMLFRVFNEKS*GWPCQAPVGGE Trigger: CTCTCCTCCCACTGGTGCCTGGCAAGGCCATCCTCAGCTTTTCTCATTAAACACTCTGAATAGCATGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | TGTCCTTCTTACCGGTTGGGACATCTTCTGGATATATaGCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: CPSYRLGHLLDI*PGEVLLDPPVV Trigger: TACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | TTGCTAGTGTGTGCAATGGTGTCAGCGTTTGGAAGCTaGTTATGGAGTGGATCCCTGGATATGGCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LLVCAMVSAFGS*LWSGSLDMAVS Trigger: AGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCTTCCAAACGCTGACACCATTGCACACACTAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | CGTTTGGAAGCTGATTATGGAGTGGATCCCTGGATATaGCAGTCTCTACATGGTCCATCCTTTCGTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: RLEADYGVDPWI*QSLHGPSFRLN Trigger: GTTGAGACGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCTTCCAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | TGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGAGTaGATCCCTGGATATGGCAGTCTCTACATGGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: CNGVSVWKLIME*IPGYGSLYMVH Trigger: ATGGACCATGTAGAGACTGCCATATCCAGGGATCCACTCCATAATCAGCTTCCAAACGCTGACACCATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | CTGCTTCCTAACACACCATTTTCAATTCCAACAAACTaGCTGCTCTCTTCTACTGTCCCTCCCTCACCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LLPNTPFSIPTN*LLSSTVPPSPC Trigger: ACAAGGTGAGGGAGGGACAGTAGAAGAGAGCAGGCAGTTTGTTGGAATTGAAAATGGTGTGTTAGGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | GTATATGTACCACATTTTCTGTATCCATTCCTCTGTTaGGGGGCATCTGGGCTCTTTCCAGCTTCTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: VYVPHFLYPFLC*GASGLFPASGY Trigger: ATAGCCAGAAGCTGGAAAGAGCCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | GTGAGTTTCTTTGTGAATGTGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCATCCATTTGCCTAGGAATT | + |
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Preference number: 3 (lower is better) Translates to: VSFFVNVLPHSG*CPPGPSICLGI Trigger: AATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | ATACAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IQFACPMGLSFQ*WPTRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CCA 72 bp | TTATGGAGTGGATCCCTGGATATGGCAGTCTCTACATaGTCCATCCTTTCGTCTCAACTCCAAACTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LWSGSLDMAVST*SILSSQLQTLS Trigger: AGACAAAGTTTGGAGTTGAGACGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCACTCCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | GAGCATCTAACTCCATTACAGATGTTTGCTGGGAATTaGTCTCAAGACCTTTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: EHLTPLQMFAGN*SQDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAATTCCCAGCAAACATCTGTAATGGAGTTAGATGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGAAGATATGTCACATGCTATTCAGAGTGTTTAATGAGAAAAGCTGAGGATGTAAGCATGAAGATCTaGGCAGCCCTCTGCTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: IRRYVTCYSECLMRKAEDVSMKI*AALCFL Trigger: TAGGAAGCAGAGGGCTGCCAAGATCTTCATGCTTAC...ATCCTCAGCTTTTCTCATTAAACACTCTGAATAGCATGTGACATATCTTCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTTTCAATAAAATCTTGCTAGTGTGTGCAATGGTGTCAGCGTTTGGAAGCCAGTCTTCATTCTTCTaGAGTTTCATGTGTTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: GPFNKILLVCAMVSAFGSQSSFF*SFMCLG Trigger: TCCTAAACACATGAAACTCAAGAAGAATGAAGACTG...GCTTCCAAACGCTGACACCATTGCACACACTAGCAAGATTTTATTGAAAGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAGAAGATATGTCACATGCTATTCAGAGTGTTTAATGAGAAAAGCTGAGGATTTGATCTCAAGACCTTaGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: IRRYVTCYSECLMRKAEDLISRP*EEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAA...ATCCTCAGCTTTTCTCATTAAACACTCTGAATAGCATGTGACATATCTTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGGCTGAGTAGTACTCCATaGTGTATATGTACCACATTT | + |
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Preference number: 3 (lower is better) Translates to: PNFVSVTPSMGVLFPILRLSSTP*CICTTF Trigger: AAATGTGGTACATATACACAATGGAGTACTACTCAG...CCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR TCA 72 bp | ATGGTACATTTGTGTAGATATGTATTAGGGCTTGCCTaGGATGGTCTATGTGTGTCGTCAGGATTAAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: MVHLCRYVLGLA*DGLCVSSGLKV Trigger: TACTTTTAATCCTGACGACACACATAGACCATCTCAGGCAAGCCCTAATACATATCTACACAAATGTACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | AAGATAAAAGTAAGCATGAAGATCTTGGCAGCCCTCTaGTTCCTAACACACCATTTTCAATTCCAACAAACT | + |
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Preference number: 3 (lower is better) Translates to: KIKVSMKILAAL*FLTHHFQFQQT Trigger: AGTTTGTTGGAATTGAAAATGGTGTGTTAGGAAGCAGAGGGCTGCCAAGATCTTCATGCTTACTTTTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR GCA 72 bp | TTGTACTATTATGAATTGTACTGTAAATATCTGATATaGAGGATATCTGGTATGCAACTCCTAAAGGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LYYYELYCKYLI*RISGMQLLKGS Trigger: TGACCCCTTTAGGAGTTGCATACCAGATATCCTGCATATCAGATATTTACAGTACAATTCATAATAGTACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | TGTTCCACCGATAGGGTTGCAGATCTCTTTAGCTCCTaGGATACTTTCTCTAGCTCCTCCACTGGGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CSTDRVADLFSS*DTFSSSSTGVP Trigger: AGGAACCCCAGTGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTATCGGTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR TCA 90 bp | CTCAACTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATCACACGATGCATGACTaGGGAGATGACTACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LNSKLCLCNSFHGCFVPNHTMHD*GDDYRC Trigger: ACACCTGTAGTCATCTCCTCAGTCATGCATCGTGTG...ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR GCA 90 bp | CTCAACTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATAAAGGAGGGTGCAGTTaGCAAGCACAGCCAAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LNSKLCLCNSFHGCFVPNKGGCS*QAQPRY Trigger: ATACCTTGGCTGTGCTTGGCAACTGCACCCTCCTTT...ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR GCA 90 bp | CTCAACTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATGGGCTCATGGAGAGCTaGATCAACCCGAATGATGAA | + |
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Preference number: 4 (lower is better) Translates to: LNSKLCLCNSFHGCFVPNGLMES*INPNDE Trigger: TTCATCATTCGGGTTGATGCAGCTCTCCATGAGCCC...ATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGGGAATTGATCTCAAGACCTTTGGAAGAGCAGTCAGTGCTCTTAACTGCTGGATAAGGCAGGCATaGAAATTGATTTCCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: LLGIDLKTFGRAVSALNCWIRQA*KLISRS Trigger: GGATCGGGAAATCAATTTCCATGCCTGCCTTATCCA...GCAGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAATTCCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | TGTATATGTACCACATTTTCTGTATCCATTCCTCTGTaGAGGGGCATCTGGGCTCTTTCCAGCTTCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CICTTFSVSIPL*RGIWALSSFWL Trigger: TAGCCAGAAGCTGGAAAGAGCCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGGAGGGGCATAGTGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGV*FPILRRGIVST Trigger: TGTGGACACTATGCCCCTCCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR TCA 90 bp | GTCATAGTCCAGGACTCTGTCACGTTACTGAAGGCAGGAATAAGAATTCCAAAAGGCCACTGGGTGGGTTaGGGTGATATTATTAACCAA | + |
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Preference number: 4 (lower is better) Translates to: VIVQDSVTLLKAGIRIPKGHWVG*GDIINQ Trigger: TTGGTTAATAATATCACCTCAACCCACCCAGTGGCC...TTTTGGAATTCTTATTCCTGCCTTCAGTAACGTGACAGAGTCCTGGACTATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR GCA 90 bp | GTTTTAGCATTCTCGTTCTTTTCCCATACACTAAACTCTGGGATCGAAGTGGGGATCCAAATATGTAAGTaGTCTAGGCCTGGGATACCC | + |
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Preference number: 4 (lower is better) Translates to: VLAFSFFSHTLNSGIEVGIQICK*SRPGIP Trigger: GGGTATCCCAGGCCTAGAGCACTTACATATTTGGAT...CCCCACTTCGATCCCAGAGTTTAGTGTATGGGAAAAGAACGAGAATGCTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CCA 90 bp | CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGGACAGGGAGAGCATTTTaGGCAGTGTTGACGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGVLFPILRTGRAF*AVLTRK Trigger: TTTCCTCGTCAACACTGCCCAAAATGCTCTCCCTGT...CCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CCA 90 bp | GTCATAGTCCAGGACTCTGTCACGTTACTGAAGGCAGGAATAAGAATTCCAAAAAACGATCGAAGGCCATaGCCAACAACATTGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: VIVQDSVTLLKAGIRIPKNDRRP*PTTLLT Trigger: AGTCAGCAATGTTGTTGGCCATGGCCTTCGATCGTT...TTTTGGAATTCTTATTCCTGCCTTCAGTAACGTGACAGAGTCCTGGACTATGAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CCA 90 bp | CTATGTTTTAGCATTCTCGTTCTTTTCCCATACACTAAACTCTGGGATCGAAGTGGGGCTTGGTCAGGATaGTGGTATAGTGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LCFSILVLFPYTKLWDRSGAWSG*WYSAEV Trigger: AACCTCTGCACTATACCACCATCCTGACCAAGCCCC...ACTTCGATCCCAGAGTTTAGTGTATGGGAAAAGAACGAGAATGCTAAAACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | ATTACAGATGTTTGCTGGGAATTGATCTCAAGACCTTaGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ITDVCWELISRP*EEQSVLLTAEP Trigger: TGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAATTCCCAGCAAACATCTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | AGAGCATCTAACTCCATTACAGATGTTTGCTGGGAATaGATCTCAAGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: RASNSITDVCWE*ISRPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCTTGAGATCAATTCCCAGCAAACATCTGTAATGGAGTTAGATGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | AAGAGACAGCTACATCTGGGTCCTTTCAATAAAATCTaGCTAGTGTGTGCAATGGTGTCAGCGTTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KRQLHLGPFNKI*LVCAMVSAFGS Trigger: GCTTCCAAACGCTGACACCATTGCACACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAGCTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR TCA 90 bp | GTCATAGTCCAGGACTCTGTCACGTTACTGAAGGCAGGAATAAGAATTCCAAAAAGTAATGGAAACGTCTaGGCAGAAAAGGAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VIVQDSVTLLKAGIRIPKSNGNV*AEKEVE Trigger: CTCCACTTCCTTTTCTGCTCAGACGTTTCCATTACT...TTTTGGAATTCTTATTCCTGCCTTCAGTAACGTGACAGAGTCCTGGACTATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR TCA 90 bp | TTCAGACACACCAGAAGAGAGCATCTAACTCCATTACAGATGTTTGCTGGGAATCTTTTAAATCCTTTCTaGGGAATAGCCCTAAGACTC | + |
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Preference number: 4 (lower is better) Translates to: FRHTRREHLTPLQMFAGNLLNPF*GIALRL Trigger: GAGTCTTAGGGCTATTCCTCAGAAAGGATTTAAAAG...ATTCCCAGCAAACATCTGTAATGGAGTTAGATGCTCTCTTCTGGTGTGTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCGATAGGGTaGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIG*QISLAPWILSL Trigger: TAGAGAAAGTATCCAAGGAGCTAAAGAGATCTGCAACCCTATCGGTGGAACAACATTATGAACTAACCAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CAA 90 bp | ATTAGAAACCCCAACAGTGGGAGAGTCTGTCTGAATCTGGACCCCAGCTGTGAGAACAGGGAGAGCATTTaGGGCAGTGTTGACGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: IRNPNSGRVCLNLDPSCENRESI*GSVDEE Trigger: TTCCTCGTCAACACTGCCCAAAATGCTCTCCCTGTT...CTCACAGCTGGGGTCCAGATTCAGACAGACTCTCCCACTGTTGGGGTTTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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| CDS-3UTR CAA 90 bp | GTTTTAGCATTCTCGTTCTTTTCCCATACACTAAACTCTGGGATCGAAGTGGGGAAAAGGAGGGTGCAGTaGCCAAGCACAGCCAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VLAFSFFSHTLNSGIEVGKRRVQ*PSTAKV Trigger: TACCTTGGCTGTGCTTGGCAACTGCACCCTCCTTTT...CCCCACTTCGATCCCAGAGTTTAGTGTATGGGAAAAGAACGAGAATGCTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000215712.2 |
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