Pregenerated sensors for OLFR551 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073974Ensembl transcript IDs: ENSMUST00000098224.3, ENSMUST00000213540.3
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAACCAGAGGAAGTCAGGACAGGAACTCTAGCAGGGCAGGAAGCTaGAGACTAGCTGATGCAGAGGCCATGAAGGAATGCTGCATATTG | + |
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Preference number: 1 (lower is better) Translates to: TTRGSQDRNSSRAGS*RLADAEAMKECCIL Trigger: CAATATGCAGCATTCCTTCATGGCCTCTGCATCAGCTAGTCTCCAGCTTCCTGCCCTGCTAGAGTTCCTGTCCTGACTTCCTCTGGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR GCA 90 bp | GCAGGAAGCTGGAGACTAGCTGATGCAGAGGCCATGAAGGAATGCTaGATATTGGCTCACTTATCATGGCTTGCTCAGCCTGTTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: AGSWRLADAEAMKEC*ILAHLSWLAQPVFS Trigger: TGAGAAAACAGGCTGAGCAAGCCATGATAAGTGAGCCAATATGCAGCATTCCTTCATGGCCTCTGCATCAGCTAGTCTCCAGCTTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR TCA 90 bp | AGGTTTGGGAGTCTACTAAGGTTCTGTTATGCTAGTCACCTCAACTaGCCCATTGTCAACTTGACACACAAGCATATCACTGTTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RFGSLLRFCYASHLN*PIVNLTHKHITVKP Trigger: TGGCTTAACAGTGATATGCTTGTGTGTCAAGTTGACAATGGGTCAGTTGAGGTGACTAGCATAACAGAACCTTAGTAGACTCCCAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR TCA 90 bp | TTCATTTTGGCAAGTGGTGCTGTCTATGTGCTAAGTTTTATGGCCTaGATATGCTTCCATCATGGAGTCAGTTGTGTTAAGGTTTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: FILASGAVYVLSFMA*ICFHHGVSCVKVWE Trigger: CTCCCAAACCTTAACACAACTGACTCCATGATGGAAGCATATTCAGGCCATAAAACTTAGCACATAGACAGCACCACTTGCCAAAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR GCA 90 bp | ACAGAGAAGAATAGTTTCCCATTTTCTTGGAATCATGGGATCATATaGCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TEKNSFPFSWNHGII*QPGALQEAFTVLFK Trigger: CTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAGAAAATGGGAAACTATTCTTCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 90 bp | GGGAACATCTGGGAACTGATTGACATCATTGATGAGATTGTAACATaGAACAACTGTGTAGAACAAAGCCATTCAGTGGGCTCAGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GNIWELIDIIDEIVT*NNCVEQSHSVGSVK Trigger: TTTAACTGAGCCCACTGAATGGCTTTGTTCTACACAGTTGTTCCATGTTACAATCTCATCAATGATGTCAATCAGTTCCCAGATGTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR GCA 90 bp | TTCAGTGCAACTCAATTTGACAGAGGAAGAATTCCTAAGAAAATTTaGAGGAGCAGCTGGATATCCACAGGTGAAAAACAAACCTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: FSATQFDRGRIPKKI*RSSWISTGEKQTSN Trigger: ATTTGAGGTTTGTTTTTCACCTGTGGATATCCAGCTGCTCCTGCAAATTTTCTTAGGAATTCTTCCTCTGTCAAATTGAGTTGCACTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR GCA 90 bp | AGCTGGATATCCACAGGTGAAAAACAAACCTCAAATTCTACTTTATaGCATAATCGTTGTTATTTGTGTTGGGCCATACACCTTCATACA | + |
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Preference number: 1 (lower is better) Translates to: SWISTGEKQTSNSTL*HNRCYLCWAIHLHT Trigger: TGTATGAAGGTGTATGGCCCAACACAAATAACAACGATTATGGCATAAAGTAGAATTTGAGGTTTGTTTTTCACCTGTGGATATCCAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR GCA 90 bp | ATCAAAAGGTCACCTGGGTCAAATTTTCTGATTGTGAAAGTCTGGTaGTTCAAAGTTGGTGATAAGACATTTGGTTTCATGAGCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: IKRSPGSNFLIVKVW*FKVGDKTFGFMSLK Trigger: TTTTAGGCTCATGAAACCAAATGTCTTATCACCAACTTTGAAGCACCAGACTTTCACAATCAGAAAATTTGACCCAGGTGACCTTTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 90 bp | CAATTTGACAGAGGAAGAATTCCTAAGAAAATTTGCAGGAGCAGCTaGATATCCACAGGTGAAAAACAAACCTCAAATTCTACTTTATGC | + |
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Preference number: 1 (lower is better) Translates to: QFDRGRIPKKICRSS*ISTGEKQTSNSTLC Trigger: GCATAAAGTAGAATTTGAGGTTTGTTTTTCACCTGTGGATATCCAGCTGCTCCTGCAAATTTTCTTAGGAATTCTTCCTCTGTCAAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 90 bp | TGTAGGTTGAGAAATATAGCAGCTTTATTTTCTAATAGCCCAAAGTaGGAAATAATCCAGGTGTCTAAGATCAGATGGTTAAACTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: CRLRNIAALFSNSPK*EIIQVSKIRWLNCG Trigger: ACCACAGTTTAACCATCTGATCTTAGACACCTGGATTATTTCCCACTTTGGGCTATTAGAAAATAAAGCTGCTATATTTCTCAACCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCAGTATCTGGGATCTATTCATGATCCTCTGGGCTCCTCCAAGGGGCTTAGTGGAAGGAGAGAACTaGCTCCTGCAGTGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: RVSIWDLFMILWAPPRGLVEGEN*LLQCVL Trigger: GAGGACACACTGCAGGAGTCAGTTCTCTCCTTCCAC...TAAGCCCCTTGGAGGAGCCCAGAGGATCATGAATAGATCCCAGATACTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGAGAGATGTTACACTGTaGTATTTCTGTGGACACCAC | + |
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Preference number: 2 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLRDVTL*YFCGHH Trigger: GTGGTGTCCACAGAAATATCACAGTGTAACATCTCT...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCGACAGCTGGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATCCTGGGACTGCAGTGTGTCCTCTaGCCTCCTTACTTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TADSWGFSLHSFFSSILGLQCVL*PPYLCF Trigger: AAAGCACAAGTAAGGAGGTCAGAGGACACACTGCAG...TCCCAGGATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGCACTACAGAAAAGAATaGGGCACAAATCCCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLHYRKE*GTNPRK Trigger: TTTTCTGGGATTTGTGCCTCATTCTTTTCTGTAGTG...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGACTGTGATATTTCTGTaGACACCACTATCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLTVIFL*TPLSVW Trigger: CCAAACTGATAGTGGTGTCCACAGAAATATCACAGT...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCGACAGCTGGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATCCTGGGACATAGCAGCCCAAGGTaGGAACTGTTTTCCTTATCA | + |
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Preference number: 2 (lower is better) Translates to: TADSWGFSLHSFFSSILGHSSPR*ELFSLS Trigger: TGATAAGGAAAACAGTTCCCACCTTGGGCTGCTATG...TCCCAGGATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR GCA 90 bp | TCATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTGAGAGAACTGACTCCTaGAGTGTGTCCTCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: SWDHMPTRCLARGIYCSLERTDS*SVSSDL Trigger: GAGGTCAGAGGACACACTGCAGGAGTCAGTTCTCTC...AAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAGTATCTGGGATCTATTCATGATCCTCTGGGCTCCTCCAAGGGGCTTACGTTGTTATTTGTGTTaGGCCATACACCTTCATACA | + |
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Preference number: 2 (lower is better) Translates to: RVSIWDLFMILWAPPRGLRCYLC*AIHLHT Trigger: TGTATGAAGGTGTATGGCCCAACACAAATAACAACG...TAAGCCCCTTGGAGGAGCCCAGAGGATCATGAATAGATCCCAGATACTGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAGTATCTGGGATCTATTCATGATCCTCTGGGCTCCTCCAAGGGGCTTAATTTTCTTGGAATCATaGGATCATATGCCAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: RVSIWDLFMILWAPPRGLIFLES*DHMPTR Trigger: CCTGGTTGGCATATGATCCCATGATTCCAAGAAAAT...TAAGCCCCTTGGAGGAGCCCAGAGGATCATGAATAGATCCCAGATACTGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | GGACCAAGCAGCTGCTGGCAAGAAGTGATAACATCCATCACAGTGATGTCCTGGGGGATTATGATAGGTTaGTTTAGATGGCGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GPSSCWQEVITSITVMSWGIMIG*FRWRLH Trigger: ATGCAAACGCCATCTAAACCAACCTATCATAATCCC...CCAGGACATCACTGTGATGGATGTTATCACTTCTTGCCAGCAGCTGCTTGGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTCCTTCCATGGAGTTTGTGTCACAAGGCAGGAGATCCTCAGAGCCCATTCTAATAGCCCAAAGTaGGAAATAATCCAGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FISFHGVCVTRQEILRAHSNSPK*EIIQVS Trigger: AGACACCTGGATTATTTCCCACTTTGGGCTATTAGA...ATGGGCTCTGAGGATCTCCTGCCTTGTGACACAAACTCCATGGAAGGAGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGAGAAGAACCCCCATGGTaGAAGGAGAGAACTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLREEPPW*KERTDS Trigger: GGAGTCAGTTCTCTCCTTCCACCATGGGGGTTCTTC...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGAAACCAGCACAGGGTCTaGGAAAACCAGCATAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRNQHRV*ENQHRS Trigger: AGACCTATGCTGGTTTTCTCAGACCCTGTGCTGGTT...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | TCATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTTTAGGTAAATGTTCCTaGGCATTGAGACCCCTATCT | + |
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Preference number: 2 (lower is better) Translates to: SWDHMPTRCLARGIYCSLLGKCS*ALRPLS Trigger: AGATAGGGGTCTCAATGCTCAGGAACATTTACCTAA...AAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTCTTCCGGAACATCTGGGAACTaGTTGACATCATTGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: RCLARGIYCSLQDPVYSSGTSGN*LTSLMR Trigger: TCTCATCAATGATGTCAATCAGTTCCCAGATGTTCC...GGAAGAATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGAACATCACTCAAGGTCTaGAGAAAACCAGCACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRTSLKV*RKPAQG Trigger: ACCCTGTGCTGGTTTTCTCCAGACCTTGAGTGATGT...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTCCTTCCATGGAGTTTGTGTCACAAGGCAGGAGATCCTCAGAGCCCATGATGAGATTGTAACATaGAACAACTGTGTAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: FISFHGVCVTRQEILRAHDEIVT*NNCVEQ Trigger: TTGTTCTACACAGTTGTTCCATGTTACAATCTCATC...ATGGGCTCTGAGGATCTCCTGCCTTGTGACACAAACTCCATGGAAGGAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CAA 90 bp | AGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTCTTCCTCCTaGCATCTAGACTGCTGGTCTGCTTTTACTTTAACAAGGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGIYCSLQDPVYSSS*HLDCWSAFTLTRQK Trigger: CTTCTGCCTTGTTAAAGTAAAAGCAGACCAGCAGTCTAGATGCAAGGAGGAAGAATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CAA 90 bp | TTCCCATTTTCTTGGAATCATGGGATCATATGCCAACCAGGTGCCTaGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTCTT | + |
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Preference number: 2 (lower is better) Translates to: FPFSWNHGIICQPGA*QEAFTVLFKIPFIL Trigger: AAGAATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAGAAAATGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATATTTGCAGGAGCAGCTaGATATCCACAGGTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: GQGQCMATGGEYDLITLYICRSS*ISTGEK Trigger: TTTTTCACCTGTGGATATCCAGCTGCTCCTGCAAAT...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATAATGTTCCTGAGCATTaGGACCCCTATCTCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: SFLPSWENITLCNTVFAHNVPEH*DPYLHH Trigger: GTGATGGAGATAGGGGTCTCAATGCTCAGGAACATT...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATATTCCTAAGAAAATTTaGAGGAGCAGCTGGATATCC | + |
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Preference number: 2 (lower is better) Translates to: GQGQCMATGGEYDLITLYIPKKI*RSSWIS Trigger: GGATATCCAGCTGCTCCTGCAAATTTTCTTAGGAAT...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTCTTCCAACAAAGCCATTCAGTaGGCTCAGTTAAATATATAC | + |
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Preference number: 2 (lower is better) Translates to: RCLARGIYCSLQDPVYSSNKAIQ*AQLNIY Trigger: GTATATATTTAACTGAGCCCACTGAATGGCTTTGTT...GGAAGAATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGACTGATTGTGAAAGTCTaGTGCTTCAAAGTTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRLIVKV*CFKVGD Trigger: ATCACCAACTTTGAAGCACCAGACTTTCACAATCAG...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGAACAGTAACTACTACATaGGTATACTTCCTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRTVTTT*VYFLSP Trigger: TGGAGAAAGGAAGTATACCCATGTAGTAGTTACTGT...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGATTGCATCTAGACTGCTaGTCTGCTTTTACTTTAACA | + |
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Preference number: 2 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRLHLDC*SAFTLT Trigger: TGTTAAAGTAAAAGCAGACCAGCAGTCTAGATGCAA...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATTACTTGACAAATAACTaGGGTCCAGAGCAAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: SFLPSWENITLCNTVFAHYLTNN*GPEQND Trigger: GTCATTTTGCTCTGGACCCCAGTTATTTGTCAAGTA...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTGCCTCAGGTTGTGTTTTCTAGAGAAGCCAAGAAAGACAGTAGATATAATAGACTTTACTTCCCTATaGTTGAAGGACAGACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FCLRLCFLEKPRKTVDIIDFTSL*LKDRLR Trigger: TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTC...TATTATATCTACTGTCTTTCTTGGCTTCTCTAGAAAACACAACCTGAGGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CAA 90 bp | CACACTATGCAATACAGTGTTTGCACATACTGTTTTTGCCTCAGGTaGTGTTTTCTAGAGAAGCCAAGAAAGACAGTAGATATAATAAAC | + |
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Preference number: 2 (lower is better) Translates to: HTMQYSVCTYCFCLR*CFLEKPRKTVDIIN Trigger: GTTTATTATATCTACTGTCTTTCTTGGCTTCTCTAGAAAACACAACCTGAGGCAAAAACAGTATGTGCAAACACTGTATTGCATAGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATACTGAGAATGAGGTCTaGAATATGCATGTTAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SFLPSWENITLCNTVFAHTENEV*NMHVRD Trigger: ATCTCTAACATGCATATTCCAGACCTCATTCTCAGT...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CAA 90 bp | GTTAAATATATACCTACCCTTAGCCCTAGCAATTGTACTTGTAGGTaGAGAAATATAGCAGCTTTATTTTCTAATAGCCCAAAGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VKYIPTLSPSNCTCR*RNIAALFSNSPKWE Trigger: TTCCCACTTTGGGCTATTAGAAAATAAAGCTGCTATATTTCTCAACCTACAAGTACAATTGCTAGGGCTAAGGGTAGGTATATATTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATCAGATGGTTAAACTGTaGTGCATTTTCAAGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: SFLPSWENITLCNTVFAHQMVKL*CIFKMK Trigger: TTTCATCTTGAAAATGCACCACAGTTTAACCATCTG...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 72 bp | CTGATGACCCAAGCTTGGTCTGAAGAACCCCCATGGTaGAAGGAGAGAACTGACTCCTGCAGTGTGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LMTQAWSEEPPW*KERTDSCSVSS Trigger: AGAGGACACACTGCAGGAGTCAGTTCTCTCCTTCCACCATGGGGGTTCTTCAGACCAAGCTTGGGTCATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 72 bp | AACCTGATGACCCAAGCTTGGTCTGAAGAACCCCCATaGTGGAAGGAGAGAACTGACTCCTGCAGTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: NLMTQAWSEEPP*WKERTDSCSVS Trigger: GGACACACTGCAGGAGTCAGTTCTCTCCTTCCACCATGGGGGTTCTTCAGACCAAGCTTGGGTCATCAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CCA 72 bp | TTCAGGGTCAGTATCTGGGATCTATTCATGATCCTCTaGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: FRVSIWDLFMIL*APPRGLGHFSG Trigger: GCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATCATGAATAGATCCCAGATACTGACCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR-3UTR CAA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGAATGCATCACAAAACTaGACAAACGTTTTCAGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLNASQN*TNVFSA Trigger: CGCGCTGAAAACGTTTGTCAAGTTTTGTGATGCATT...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAAGCAGCTGCTGGCAAGAAGTGATAACATCCATCACAGTGATGTCCTGGTGCCAACCAGGTGCCTaGCAAGAGGCATTTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GPSSCWQEVITSITVMSWCQPGA*QEAFTV Trigger: AACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCA...CCAGGACATCACTGTGATGGATGTTATCACTTCTTGCCAGCAGCTGCTTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGTCTGGTGCTTCAAAGTaGGTGATAAGACATTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLSGASK*VIRHLV Trigger: AACCAAATGTCTTATCACCAACTTTGAAGCACCAGA...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | GAAGAACCCCCATGGTGGAAGGAGAGAACTGACTCCTaGAGTGTGTCCTCTGACCTCCTTACTTGTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: EEPPWWKERTDS*SVSSDLLTCAL Trigger: TAAAGCACAAGTAAGGAGGTCAGAGGACACACTGCAGGAGTCAGTTCTCTCCTTCCACCATGGGGGTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | GGGGACATCCAGCATGCTAAACAAACAGCCGACAGCTaGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GDIQHAKQTADS*GFSLHSFFSSI Trigger: GATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGTTTGTTTAGCATGCTGGATGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCCGACAGCTGGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATCCTGGGAGTTTATTCTTCCTCCTaGCATCTAGACTGCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TADSWGFSLHSFFSSILGVYSSS*HLDCWS Trigger: AGACCAGCAGTCTAGATGCAAGGAGGAAGAATAAAC...TCCCAGGATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTGTGTCACAAGGCAGGAGATCCTCAGAGCCCATAGGGGGACATCCAGCATTTACTTCCCTATGGTaGAAGGACAGACTGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: EFVSQGRRSSEPIGGHPAFTSLW*KDRLRM Trigger: CATTCTCAGTCTGTCCTTCAACCATAGGGAAGTAAA...TGCTGGATGTCCCCCTATGGGCTCTGAGGATCTCCTGCCTTGTGACACAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | GAAGGAATGCTGCATATTGGCTCACTTATCATGGCTTaGTCAGCCTGTTTTCTCATAGAACCTGGGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: EGMLHIGSLIMA*SACFLIEPGTT Trigger: GGTGGTCCCAGGTTCTATGAGAAAACAGGCTGAGCAAGCCATGATAAGTGAGCCAATATGCAGCATTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCTTTCAGCGCGTATACTaGACAAATAACTGGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HGIICQPGALQEAFTVLFFQRVY*TNNWGP Trigger: TGGACCCCAGTTATTTGTCAAGTATACGCGCTGAAA...GAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | CTTGGAATCATGGGATCATATGCCAACCAGGTGCCTTaGAAGAGGCATTTACTGTTCTCTTCAAGATCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LGIMGSYANQVP*KRHLLFSSRSR Trigger: ACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTTCGTTGTTATTTGTGTaGGGCCATACACCTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: SWDHMPTRCLARGIYCSLSLLFV*GHTPSY Trigger: GTATGAAGGTGTATGGCCCAACACAAATAACAACGA...AAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCCATAATCGTTGTTATTaGTGTTGGGCCATACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: HGIICQPGALQEAFTVLFHNRCY*CWAIHL Trigger: AAGGTGTATGGCCCAACACAAATAACAACGATTATG...GAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR TCA 72 bp | GAAGGGAAGAAAGGGGAAAACGATGCTTGGGTGTTCTaGGGATATGCCAATCTTAGGGATTATGATAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: EGKKGENDAWVF*GYANLRDYDRL Trigger: CAACCTATCATAATCCCTAAGATTGGCATATCCTCAGAACACCCAAGCATCGTTTTCCCCTTTCTTCCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | TGGTTGAAGGACAGACTGAGAATGAGGTCTGGAATATaGATGTTAGAGATGCCAGAGATACCAAGACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: WLKDRLRMRSGI*MLEMPEIPRQW Trigger: CCATTGTCTTGGTATCTCTGGCATCTCTAACATGCATATTCCAGACCTCATTCTCAGTCTGTCCTTCAACCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | TTCCCTATGGTTGAAGGACAGACTGAGAATGAGGTCTaGAATATGCATGTTAGAGATGCCAGAGATACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPMVEGQTENEV*NMHVRDARDTK Trigger: CTTGGTATCTCTGGCATCTCTAACATGCATATTCCAGACCTCATTCTCAGTCTGTCCTTCAACCATAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR TCA 72 bp | ATTTCAGTCAATAGAAAGTCTTTATTAGCCAGTCAGTaGTTGCACTGGGTGTTTGGAATCCCATCAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ISVNRKSLLASQ*LHWVFGIPSGL Trigger: GAGCCCTGATGGGATTCCAAACACCCAGTGCAATCACTGACTGGCTAATAAAGACTTTCTATTGACTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | ATTTTCTTGGAATCATGGGATCATATGCCAACCAGGTaGCTTGCAAGAGGCATTTACTGTTCTCTTCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IFLESWDHMPTR*LARGIYCSLQD Trigger: ATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | AATAGTTTCCCATTTTCTTGGAATCATGGGATCATATaGCAACCAGGTGCCTTGCAAGAGGCATTTACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSFPFSWNHGII*QPGALQEAFTV Trigger: AACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAGAAAATGGGAAACTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | TGGGAACTGATTGACATCATTGATGAGATTGTAACATaGAACAACTGTGTAGAACAAAGCCATTCAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WELIDIIDEIVT*NNCVEQSHSVG Trigger: GCCCACTGAATGGCTTTGTTCTACACAGTTGTTCCATGTTACAATCTCATCAATGATGTCAATCAGTTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | ACCAAGACAATGGAATGTGCTGATCAAAAGGTCACCTaGGTCAAATTTTCTGATTGTGAAAGTCTGGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TKTMECADQKVT*VKFSDCESLVL Trigger: AAGCACCAGACTTTCACAATCAGAAAATTTGACCCAGGTGACCTTTTGATCAGCACATTCCATTGTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | ATATGCATGTTAGAGATGCCAGAGATACCAAGACAATaGAATGTGCTGATCAAAAGGTCACCTGGGTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ICMLEMPEIPRQ*NVLIKRSPGSN Trigger: ATTTGACCCAGGTGACCTTTTGATCAGCACATTCCATTGTCTTGGTATCTCTGGCATCTCTAACATGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | CACAACAAAGGCTTTGAAGTAGACTTTACTTCCCTATaGTTGAAGGACAGACTGAGAATGAGGTCTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: HNKGFEVDFTSL*LKDRLRMRSGI Trigger: TATTCCAGACCTCATTCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTCTTCCGCAATGAATTTCTTCTaGGTTATACTCATTGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RCLARGIYCSLQDPVYSSAMNFF*VILIGV Trigger: CACTCCAATGAGTATAACCAAGAAGAAATTCATTGC...GGAAGAATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGGCTTTGAAGTAGACTTTACTTCCCTATGGTTGAAGGACAGACTGAGATCAGTGCAACTCAATTaGACAGAGGAAGAATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NKGFEVDFTSLWLKDRLRSVQLN*TEEEFL Trigger: TAGGAATTCTTCCTCTGTCAAATTGAGTTGCACTGA...TCTCAGTCTGTCCTTCAACCATAGGGAAGTAAAGTCTACTTCAAAGCCTTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR TCA 72 bp | GTTATGCTAGTCACCTCAACTGACCCATTGTCAACTTaGCACACAAGCATATCACTGTTAAGCCAAAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: VMLVTSTDPLST*HTSISLLSQKL Trigger: AAGTTTTTGGCTTAACAGTGATATGCTTGTGTGTCAAGTTGACAATGGGTCAGTTGAGGTGACTAGCATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | GACTGGGCTCTTCCCAACAATCAAGAATTAAGAAAATaGCATAGGCTTGTCTACAGCTTTATCTTATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DWALPNNQELRK*HRLVYSFILWR Trigger: TCTCCATAAGATAAAGCTGTAGACAAGCCTATGGCATTTTCTTAATTCTTGATTGTTGGGAAGAGCCCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | AGGTCACCTGGGTCAAATTTTCTGATTGTGAAAGTCTaGTGCTTCAAAGTTGGTGATAAGACATTTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSPGSNFLIVKV*CFKVGDKTFGF Trigger: GAAACCAAATGTCTTATCACCAACTTTGAAGCACCAGACTTTCACAATCAGAAAATTTGACCCAGGTGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | AATAACACCATCAAACATGAGCAGATGGGGAACATCTaGGAACTGATTGACATCATTGATGAGATTGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: NNTIKHEQMGNI*ELIDIIDEIVT Trigger: TGTTACAATCTCATCAATGATGTCAATCAGTTCCCAGATGTTCCCCATCTGCTCATGTTTGATGGTGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CCA 72 bp | AGAGGAAGAATTCCTAAGAAAATTTGCAGGAGCAGCTaGATATCCACAGGTGAAAAACAAACCTCAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RGRIPKKICRSS*ISTGEKQTSNS Trigger: AGAATTTGAGGTTTGTTTTTCACCTGTGGATATCCAGCTGCTCCTGCAAATTTTCTTAGGAATTCTTCCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR TCA 72 bp | GAGACATTTTCTCAATTGAAGCTTTCTCCATTCAGATaGCTATACCTTGTGTCAAGATGTCATAAACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: ETFSQLKLSPFR*LYLVSRCHKPP Trigger: TGGTGGTTTATGACATCTTGACACAAGGTATAGTCATCTGAATGGAGAAAGCTTCAATTGAGAAAATGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR GCA 72 bp | TCCACAGGTGAAAAACAAACCTCAAATTCTACTTTATaGCATAATCGTTGTTATTTGTGTTGGGCCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: STGEKQTSNSTL*HNRCYLCWAIH Trigger: GTGTATGGCCCAACACAAATAACAACGATTATGGCATAAAGTAGAATTTGAGGTTTGTTTTTCACCTGTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR CCA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGGGAGTTTGGGGACAGTaGAGGTGCAGAGTATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLGVWGQ*RCRVSG Trigger: ACCTGATACTCTGCACCTCCACTGTCCCCAAACTCC...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR CCA 90 bp | GATCCTCTGGGCTCCTCCAAGGGGCTTAGGTCACTTCTCTGGCTCTACCCTCTGGCCATATATGTTGTTTaGTTGTGTGCCCCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPLGSSKGLRSLLWLYPLAIYVV*LCAPTS Trigger: GCTTGTGGGGGCACACAACCAAACAACATATATGGC...CAGAGGGTAGAGCCAGAGAAGTGACCTAAGCCCCTTGGAGGAGCCCAGAGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGTATCTGGGATCTATTCATGATCCTCTGGGCTCCTCCAAGGGGCTTAAATGCAATCCAAAAGTaGGACGCCTCCAGGCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSIWDLFMILWAPPRGLNAIQK*DASRPG Trigger: TCCCGGCCTGGAGGCGTCCCACTTTTGGATTGCATT...TAAGCCCCTTGGAGGAGCCCAGAGGATCATGAATAGATCCCAGATACTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCCGACAGCTGGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATCCTGGGAAAGGAGCTTGGGTTCTaGTGGCTGTGGTTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TADSWGFSLHSFFSSILGKELGF*WLWFVC Trigger: ACACACAAACCACAGCCATCAGAACCCAAGCTCCTT...TCCCAGGATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCCGACAGCTGGGGCTTCTCTCTTCACTCGTTCTTTTCTTCCATCCTGGGAAGCCCGGAGGATGAGTaGATAGGATATGGCAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TADSWGFSLHSFFSSILGSPEDE*IGYGNT Trigger: TGTATTGCCATATCCTATGCACTCATCCTCCGGGCT...TCCCAGGATGGAAGAAAAGAACGAGTGAAGAGAGAAGCCCCAGCTGTCGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR TCA 90 bp | TGCATCACAAAACTTGACAAACGTTTTCAGCGCGTATACTTGACAAATAACTGGGGCCGGGAATCCCCATaGGCAGGAAGGAGCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CITKLDKRFQRVYLTNNWGRESP*AGRSLG Trigger: ACCCAAGCTCCTTCCTGCTCATGGGGATTCCCGGCC...CCAGTTATTTGTCAAGTATACGCGCTGAAAACGTTTGTCAAGTTTTGTGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CAA 72 bp | CTAGCTGATGCAGAGGCCATGAAGGAATGCTGCATATaGGCTCACTTATCATGGCTTGCTCAGCCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LADAEAMKECCI*AHLSWLAQPVF Trigger: GAAAACAGGCTGAGCAAGCCATGATAAGTGAGCCAATATGCAGCATTCCTTCATGGCCTCTGCATCAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR TCA 90 bp | TCATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTTATAGAAGAGAAGGATaGCACCTAGGTGGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWDHMPTRCLARGIYCSLYRREG*HLGGSH Trigger: GTGGCTCCCACCTAGGTGTCATCCTTCTCTTCTATA...AAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR CCA 90 bp | TCATGTAGAAATCCATGTAAACATCACTCAAGGTCTGGAGAAAACCAGCACAGGCAAAGGTCTTTGCCCTaGCCTCTTTGGAGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCRNPCKHHSRSGENQHRQRSLP*PLWRRG Trigger: GCCTCTCCTCCAAAGAGGCCAGGGCAAAGACCTTTG...CCTGTGCTGGTTTTCTCCAGACCTTGAGTGATGTTTACATGGATTTCTACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATCACCACCAACAGGACTaGCATGTTGCCAAGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGQCMATGGEYDLITLYHHQQD*HVAKNC Trigger: GCAGTTCTTGGCAACATGGCAGTCCTGTTGGTGGTG...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | CATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAAGGCAATCTCAGCTaGATTTGCCCAAAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGIICQPGALQEAFTVLFKGNLS*ICPKEC Trigger: GCACTCTTTTGGGCAAATGCAGCTGAGATTGCCTTT...GAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATAGTGCCAAAGGTCTTTaGCCTGGCCTCTTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQGQCMATGGEYDLITLYSAKGL*PGLFGG Trigger: TCCTCCAAAGAGGCCAGGGCAAAGACCTTTGGCACT...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| 3UTR CAA 72 bp | TCTTGGAATCATGGGATCATATGCCAACCAGGTGCCTaGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SWNHGIICQPGA*QEAFTVLFKIP Trigger: CGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGATTCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | TCATGTAGAAATCCATGTAAACATCACTCAAGGTCTGGAGAAAACCAGCACAGGTGTTGTTTGGTTGTGTaGCCCCACAAGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCRNPCKHHSRSGENQHRCCLVV*PHKPAS Trigger: TGAAGCTGGCTTGTGGGGGCACACAACCAAACAACA...CCTGTGCTGGTTTTCTCCAGACCTTGAGTGATGTTTACATGGATTTCTACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | CCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTCAAGATCCCGTTTATTACCACCAGTGTGGCTaGTGTGATGCCATATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTRCLARGIYCSLQDPVYYHQCG*CDAIYV Trigger: AACATATATGGCATCACAGCAGCCACACTGGTGGTA...ATAAACGGGATCTTGAAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATTTGCCCTGGCCTCTTTaGAGGAGAGGCCCAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSWENITLCNTVFAHLPWPL*RRGPTQ Trigger: CTGTGTTGGGCCTCTCCTCCAAAGAGGCCAGGGCAA...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | CATCTAGACTGCTGGTCTGCTTTTACTTTAACAAGGCAGAAGAGTGAGTTAAGAACAGGACTGCCATGTTaGCAAGAACTGCTAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLDCWSAFTLTRQKSELRTGLPC*QELLGH Trigger: ATGCCCTAGCAGTTCTTGGCAACATGGCAGTCCTGT...TCTTAACTCACTCTTCTGCCTTGTTAAAGTAAAAGCAGACCAGCAGTCTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTCCATCCTGGGAAAATATCACACTATGCAATACAGTGTTTGCACATAGGTACATGGGTTGGTaGAGTGAAGGCTCAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SFLPSWENITLCNTVFAHRYMGW*SEGSER Trigger: GCGCTCTGAGCCTTCACTGCACCAACCCATGTACCT...ATGTGCAAACACTGTATTGCATAGTGTGATATTTTCCCAGGATGGAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CCA 90 bp | CATCTAGACTGCTGGTCTGCTTTTACTTTAACAAGGCAGAAGAGTGAGTTAAGAAACAGGTACATGGGTTaGTGCAGTGAAGGCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HLDCWSAFTLTRQKSELRNRYMG*CSEGSE Trigger: CTCTGAGCCTTCACTGCACCAACCCATGTACCTGTT...TCTTAACTCACTCTTCTGCCTTGTTAAAGTAAAAGCAGACCAGCAGTCTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR GCA 90 bp | TTTTGCCTCAGGTTGTGTTTTCTAGAGAAGCCAAGAAAGACAGTAGATATAATAAATCTCAGCTGCATTTaGCCAAAAGAGTGCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FCLRLCFLEKPRKTVDIINLSCI*PKECEE Trigger: CTCCTCGCACTCTTTTGGGCAAATGCAGCTGAGATT...TATTATATCTACTGTCTTTCTTGGCTTCTCTAGAAAACACAACCTGAGGCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| 3UTR CAA 72 bp | TACTGTTCTCTTCAAGATCCCGTTTATTCTTCCTCCTaGCATCTAGACTGCTGGTCTGCTTTTACTTTAACA | + |
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Preference number: 4 (lower is better) Translates to: YCSLQDPVYSSS*HLDCWSAFTLT Trigger: TGTTAAAGTAAAAGCAGACCAGCAGTCTAGATGCAAGGAGGAAGAATAAACGGGATCTTGAAGAGAACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | GGACCAAGCAGCTGCTGGCAAGAAGTGATAACATCCATCACAGTGATGTCCTGGAAGAGTGCGAGGAGTTaGGGGACAGTGGAGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GPSSCWQEVITSITVMSWKSARS*GTVEVQ Trigger: CTGCACCTCCACTGTCCCCAAACTCCTCGCACTCTT...CCAGGACATCACTGTGATGGATGTTATCACTTCTTGCCAGCAGCTGCTTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | GAGACTAGAGGGACAGGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATGTGATGCCATATATGTaGTTTGGTTGTGTGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: ETRGTGQGQCMATGGEYDVMPYM*FGCVPP Trigger: TGGGGGCACACAACCAAACAACATATATGGCATCAC...ATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCCTGTCCCTCTAGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATTTTGCCCTGGCCTCTTaGGAGGAGAGGCCCAACACA | + |
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Preference number: 5 (lower is better) Translates to: GQGQCMATGGEYDLITLYFALAS*EERPNT Trigger: TGTGTTGGGCCTCTCCTCCAAAGAGGCCAGGGCAAA...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | GGGCAGGGACAATGTATGGCTACTGGGGGTGAATATGATCTAATCACATTATATAACAGGACTGCCATGTaGCCAAGAACTGCTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GQGQCMATGGEYDLITLYNRTAM*PRTARA Trigger: TGCCCTAGCAGTTCTTGGCAACATGGCAGTCCTGTT...ATATAATGTGATTAGATCATATTCACCCCCAGTAGCCATACATTGTCCCTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | TCATGGGATCATATGCCAACCAGGTGCCTTGCAAGAGGCATTTACTGTTCTCTTATATATGTTGTTTGGTaGTGTGCCCCCACAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SWDHMPTRCLARGIYCSLIYVVW*CAPTSQ Trigger: CTGGCTTGTGGGGGCACACAACCAAACAACATATAT...AAGAGAACAGTAAATGCCTCTTGCAAGGCACCTGGTTGGCATATGATCCCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | TGCATCACAAAACTTGACAAACGTTTTCAGCGCGTATACTTGACAAATAACTGGAAGTGCCAAAGGTCTTaGCCCTGGCCTCTTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CITKLDKRFQRVYLTNNWKCQRS*PWPLWR Trigger: CCTCCAAAGAGGCCAGGGCAAAGACCTTTGGCACTT...CCAGTTATTTGTCAAGTATACGCGCTGAAAACGTTTGTCAAGTTTTGTGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS-3UTR CAA 90 bp | TGCATCACAAAACTTGACAAACGTTTTCAGCGCGTATACTTGACAAATAACTGGTGCCATATATGTTGTTaGGTTGTGTGCCCCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: CITKLDKRFQRVYLTNNWCHICC*VVCPHK Trigger: CTTGTGGGGGCACACAACCAAACAACATATATGGCA...CCAGTTATTTGTCAAGTATACGCGCTGAAAACGTTTGTCAAGTTTTGTGATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213540.3 |
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| CDS GCA 72 bp | CATCTGGGTAGCACAGGCTCCAAAGGCAATCTCAGCTaGATTTGCCCAAAAGAGTGCGAGGAGTTTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HLGSTGSKGNLS*ICPKECEEFGD Trigger: GTCCCCAAACTCCTCGCACTCTTTTGGGCAAATGCAGCTGAGATTGCCTTTGGAGCCTGTGCTACCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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| CDS CAA 72 bp | CCTACCACCAGTGTGGCTGCTGTGATGCCATATATGTaGTTTGGTTGTGTGCCCCCACAAGCCAGCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: PTTSVAAVMPYM*FGCVPPQASFT Trigger: GGTGAAGCTGGCTTGTGGGGGCACACAACCAAACAACATATATGGCATCACAGCAGCCACACTGGTGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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| CDS TCA 72 bp | CCTCTTTGGAGGAGAGGCCCAACACAGCCCGGAGGATaGGTGCATAGGATATGGCAATACAAATGGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLWRRGPTQPGG*VHRIWQYKWSQ Trigger: CTGACTCCATTTGTATTGCCATATCCTATGCACTCATCCTCCGGGCTGTGTTGGGCCTCTCCTCCAAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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| CDS CAA 90 bp | CCAAAGGCAATCTCAGCTGCATTTGCCCAAAAGAGTGCGAGGAGTTaGGGGACAGTGGAGGTGCAGAGTATCAGGTCAATAGTGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: PKAISAAFAQKSARS*GTVEVQSIRSIVDS Trigger: GCTGTCCACTATTGACCTGATACTCTGCACCTCCACTGTCCCCAAACTCCTCGCACTCTTTTGGGCAAATGCAGCTGAGATTGCCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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| CDS CAA 72 bp | ATCTCAGCTGCATTTGCCCAAAAGAGTGCGAGGAGTTaGGGGACAGTGGAGGTGCAGAGTATCAGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: ISAAFAQKSARS*GTVEVQSIRSI Trigger: TATTGACCTGATACTCTGCACCTCCACTGTCCCCAAACTCCTCGCACTCTTTTGGGCAAATGCAGCTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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| CDS GCA 72 bp | AATACAAATGGAGTCAGTTCCTACCACCAGTGTGGCTaGTGTGATGCCATATATGTTGTTTGGTTGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: NTNGVSSYHQCG*CDAIYVVWLCA Trigger: GGCACACAACCAAACAACATATATGGCATCACAGCAGCCACACTGGTGGTAGGAACTGACTCCATTTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098224.3 ENSMUST00000213540.3 |
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