Pregenerated sensors for OLFR550 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073975Ensembl transcript IDs: ENSMUST00000098225.3, ENSMUST00000216524.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGACTaGCAACACCTGATTAGGAGTGCACAAGATCTCAGCAGAGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: NNVSQTQQGSQSHVD*QHLIRSAQDLSRVR Trigger: CCTAACTCTGCTGAGATCTTGTGCACTCCTAATCAGGTGTTGTCAGTCCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 90 bp | TGGGTGAGCTGTTGCAGCATGTATGAGTCTAGGGTAGTTCACCTCTaGTTTAATAAAACAAGAAAAAGATTATCACTGCAGTGCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: WVSCCSMYESRVVHL*FNKTRKRLSLQCSN Trigger: GTTGGAGCACTGCAGTGATAATCTTTTTCTTGTTTTATTAAACCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCTCACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 90 bp | AGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGTTTaGGGAAGACATATAAACACAGCTTACCTCAGGTGTTCCTTACTT | + |
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Preference number: 1 (lower is better) Translates to: SYWQLIAISGRQLKV*GRHINTAYLRCSLL Trigger: AAGTAAGGAACACCTGAGGTAAGCTGTGTTTATATGTCTTCCCCAAACTTTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 90 bp | TCAGGGACCAGGAAAATAATTCAGTCAACAAAGTACATAGAGGAATaGCAGTCAATGTTCTTCTCTAGCCCACATATGCTTATATATGCA | + |
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Preference number: 1 (lower is better) Translates to: SGTRKIIQSTKYIEE*QSMFFSSPHMLIYA Trigger: TGCATATATAAGCATATGTGGGCTAGAGAAGAACATTGACTGTCATTCCTCTATGTACTTTGTTGACTGAATTATTTTCCTGGTCCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR GCA 90 bp | CCTTACTTACACATGAAATGCAAAGAGGAATCTAGGAAGAAGAGATaGCTGTATAGACTGTGTACAATTAGTTTTAACTGTCTATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PYLHMKCKEESRKKR*LYRLCTISFNCLFD Trigger: GTCAAATAGACAGTTAAAACTAATTGTACACAGTCTATACAGGCATCTCTTCTTCCTAGATTCCTCTTTGCATTTCATGTGTAAGTAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 90 bp | ACTGGTAAAGTACAGATATCCCTCTTAGCTTACCCCATAATAAATTaGGTCCTTCAGAAATATAATCTTGTATGTATGGGCTTCTTATAC | + |
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Preference number: 1 (lower is better) Translates to: TGKVQISLLAYPIIN*VLQKYNLVCMGFLY Trigger: GTATAAGAAGCCCATACATACAAGATTATATTTCTGAAGGACCCAATTTATTATGGGGTAAGCTAAGAGGGATATCTGTACTTTACCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGGGTGGCACCATTCCCTaGGCAAGAGATCCTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWGGTIP*ARDPGL Trigger: CAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACC...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGTCAAATTGGTCTGTGTaGATGCCTGTAGAGGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWSNWSV*MPVEGC Trigger: ACAACCCTCTACAGGCATGCACACAGACCAATTTGA...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAAGGGACTGGCTAAGTTCTTGTCTACAGTTATaGTACTTCAAGTTCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: IPWARDPGLYKSGRDWLSSCLQL*YFKFLC Trigger: ACACAGGAACTTGAAGTATCATAACTGTAGACAAGA...ACTTAGCCAGTCCCTTCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGTACCTTCCACCCTCACACTCAAATTCATAGGCTCTTTTTCTTGAAATGTAGCAGATTAGCAGCCTaGGTGAGCTGTTGCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PCTFHPHTQIHRLFFLKCSRLAA*VSCCSM Trigger: CATGCTGCAACAGCTCACCCAGGCTGCTAATCTGCT...ACATTTCAAGAAAAAGAGCCTATGAATTTGAGTGTGAGGGTGGAAGGTACATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCATTCTCACAGGAGGAAAATCTAACCCAAAAAGTTAACAAGGGTTCTGCCGTCTTGTTTGTTAAATaGCCCAGTCCACACTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: ESFSQEENLTQKVNKGSAVLFVK*PSPHWV Trigger: CACCCAGTGTGGACTGGGTCATTTAACAAACAAGAC...GGCAGAACCCTTGTTAACTTTTTGGGTTAGATTTTCCTCCTGTGAGAATGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGTCTAGGAAGAAGAGATaGCTGTATAGACTGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWSRKKR*LYRLCT Trigger: TGTACACAGTCTATACAGGCATCTCTTCTTCCTAGA...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCATTCTCACAGGAGGAAAATCTAACCCAAAAAGTTAACAAGGGTTCTGCCAATAAAATCTCACCGTaGAGATGGGAGGTGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: ESFSQEENLTQKVNKGSANKISP*RWEVGT Trigger: TGTGCCCACCTCCCATCTCCACGGTGAGATTTTATT...GGCAGAACCCTTGTTAACTTTTTGGGTTAGATTTTCCTCCTGTGAGAATGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGTACCTTCCACCCTCACACTCAAATTCATAGGCTCTTTTTCTTGAAATGTGCCCCTGGGTTGCCATaGGTACCAAATTGTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PCTFHPHTQIHRLFFLKCAPGLP*VPNCLL Trigger: AAGAAGACAATTTGGTACCCATGGCAACCCAGGGGC...ACATTTCAAGAAAAAGAGCCTATGAATTTGAGTGTGAGGGTGGAAGGTACATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCATTCTCACAGGAGGAAAATCTAACCCAAAAAGTTAACAAGGGTTCTGCCACTGAGTTTCAGAGATaGAAACTGAGCCTTAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: ESFSQEENLTQKVNKGSATEFQR*KLSLKA Trigger: GGCCTTAAGGCTCAGTTTTCATCTCTGAAACTCAGT...GGCAGAACCCTTGTTAACTTTTTGGGTTAGATTTTCCTCCTGTGAGAATGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGAGGCAGTTAAAAGTTTaGGGAAGACATATAAACACA | + |
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Preference number: 2 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWRQLKV*GRHINT Trigger: TGTGTTTATATGTCTTCCCCAAACTTTTAACTGCCT...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 90 bp | GAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGTTaGGGGAAGACATATAAACACAGCTTACCTCAGGTGTTCCTTACT | + |
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Preference number: 2 (lower is better) Translates to: ELLAIDSYFWEAVKS*GKTYKHSLPQVFLT Trigger: AGTAAGGAACACCTGAGGTAAGCTGTGTTTATATGTCTTCCCCAAACTTTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 90 bp | CAAGGTCACTACCTCAGATTTATGAAATACAGGGGATATATGACATaGAGTTATACCACACCCTTACTTTCTCAACTTTGTGTCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: QGHYLRFMKYRGYMT*SYTTPLLSQLCVLI Trigger: AATGAGGACACAAAGTTGAGAAAGTAAGGGTGTGGTATAACTCAATGTCATATATCCCCTGTATTTCATAAATCTGAGGTAGTGACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 72 bp | TCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGACTaGCAACACCTGATTAGGAGTGCACAAGATCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SQTQQGSQSHVD*QHLIRSAQDLS Trigger: GCTGAGATCTTGTGCACTCCTAATCAGGTGTTGTCAGTCCACATGCGACTGACTGCCCTGCTGTGTCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CAA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGCCATGGAGATGGGAGTaGGGCACAAGATCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWPWRWE*GTRSQQ Trigger: CTGCTGAGATCTTGTGCCCAACTCCCATCTCCATGG...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR GCA 72 bp | GATGCTAACAGCAGATTAGCAGCCTGGGTGAGCTGTTaGAGCATGTATGAGTCTAGGGTAGTTCACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: DANSRLAAWVSC*SMYESRVVHLW Trigger: CCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCTCACCCAGGCTGCTAATCTGCTGTTAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | TTGTCTTGTTTGTTAAATGACCCAGTCCACACTGGGTaGCACCATTCCCTGGGCAAGAGATCCTGGGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LSCLLNDPVHTG*HHSLGKRSWAV Trigger: TACAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACCCAGTGTGGACTGGGTCATTTAACAAACAAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | CTAGAGCAGGTTGATGCTAACAGCAGATTAGCAGCCTaGGTGAGCTGTTGCAGCATGTATGAGTCTAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: LEQVDANSRLAA*VSCCSMYESRV Trigger: TACCCTAGACTCATACATGCTGCAACAGCTCACCCAGGCTGCTAATCTGCTGTTAGCATCAACCTGCTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | GATCTCAGCAGAGTTAGGCCAGATAAAATCTCACCATaGAGATGGGAGTTGGGCACAAGATCTCAGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: DLSRVRPDKISP*RWELGTRSQQA Trigger: AGCCTGCTGAGATCTTGTGCCCAACTCCCATCTCCATGGTGAGATTTTATCTGGCCTAACTCTGCTGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAAGGGACTGGCTAAGTGCCTTCCGTTCTGTGTaGCTTTTTGTCTGGGTATTT | + |
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Preference number: 3 (lower is better) Translates to: IPWARDPGLYKSGRDWLSAFRSV*LFVWVF Trigger: AAATACCCAGACAAAAAGCAACACAGAACGGAAGGC...ACTTAGCCAGTCCCTTCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR-3UTR CAA 90 bp | CCATGTACCTTCCACCCTCACACTCAAATTCATAGGCTCTTTTTCTTGAAATGTGGTTCTGCCCCTGGGTaGCCATGGGTACCAAATTGT | + |
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Preference number: 3 (lower is better) Translates to: PCTFHPHTQIHRLFFLKCGSAPG*PWVPNC Trigger: ACAATTTGGTACCCATGGCAACCCAGGGGCAGAACC...ACATTTCAAGAAAAAGAGCCTATGAATTTGAGTGTGAGGGTGGAAGGTACATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 72 bp | GAAGATGATTTAAGCAGTTCCCCCTCCCCACTGAAATaGCTCTACAAGCCTACCCATCCTCCTGAGATACAA | + |
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Preference number: 3 (lower is better) Translates to: EDDLSSSPSPLK*LYKPTHPPEIQ Trigger: TTGTATCTCAGGAGGATGGGTAGGCTTGTAGAGTCATTTCAGTGGGGAGGGGGAACTGCTTAAATCATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | TACGGAGTTTCTGACTCTCTACTCCTTGACAAGTTGTaGGTGTCTGAGTTAATCACAGAGACCATGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: YGVSDSLLLDKL*VSELITETMGD Trigger: GTCACCCATGGTCTCTGTGATTAACTCAGACACCCACAACTTGTCAAGGAGTAGAGAGTCAGAAACTCCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | TTAGGCCAGATAAAATCTCACCATGGAGATGGGAGTTaGGCACAAGATCTCAGCAGGCTTAGGCCAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: LGQIKSHHGDGS*AQDLSRLRPNK Trigger: TTTATTTGGCCTAAGCCTGCTGAGATCTTGTGCCCAACTCCCATCTCCATGGTGAGATTTTATCTGGCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | AAAAAGATGGACTCTCTGTCTCCCAACAGCTGCCTCTaGCCCTCACAATATTTGCATCATCTCTTCTACAAG | + |
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Preference number: 3 (lower is better) Translates to: KKMDSLSPNSCL*PSQYLHHLFYK Trigger: CTTGTAGAAGAGATGATGCAAATATTGTGAGGGCCAGAGGCAGCTGTTGGGAGACAGAGAGTCCATCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | GTTCTCTGTTTCATGCATGAAGACCAGCTGGATGTCTaGCATAATGGCTGCTTAGAAACTGAGTTTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VLCFMHEDQLDV*HNGCLETEFQR Trigger: TCTCTGAAACTCAGTTTCTAAGCAGCCATTATGCCAGACATCCAGCTGGTCTTCATGCATGAAACAGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 72 bp | TCTCTTCTACAAGGACCCCTGAGCTGTGAGAGGAGATaGTGTGATATTATAGATGTTCCATTTAAGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SLLQGPLSCERR*CDIIDVPFKAE Trigger: TTCAGCCTTAAATGGAACATCTATAATATCACATCATCTCCTCTCACAGCTCAGGGGTCCTTGTAGAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR GCA 72 bp | AAACAAGAAAAAGATTATCACTGCAGTGCTCCAACATaGTCAGCGTCTGAAGTCTTTAACTATAGAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: KQEKDYHCSAPT*SASEVFNYRGQ Trigger: CTGACCTCTATAGTTAAAGACTTCAGACGCTGAGCATGTTGGAGCACTGCAGTGATAATCTTTTTCTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | CAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGTTTaGGGAAGACATATAAACACAGCTTACCTCAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: QLIAISGRQLKV*GRHINTAYLRC Trigger: ACACCTGAGGTAAGCTGTGTTTATATGTCTTCCCCAAACTTTTAACTGCCTCCCAGAAATAGCTATCAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CCA 72 bp | CTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTaGGAGGCAGTTAAAAGTTTGGGGAAGACATATAAA | + |
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Preference number: 3 (lower is better) Translates to: LAEELLAIDSYF*EAVKSLGKTYK Trigger: TTTATATGTCTTCCCCAAACTTTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 72 bp | AACCATATAGCATGGTTCTATATGAAGAGAGGGGAGTaGCTGGGTATTGCTTGTTTCTTAATTCATTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: NHIAWFYMKRGE*LGIACFLIHLA Trigger: AGCTAAATGAATTAAGAAACAAGCAATACCCAGTCACTCCCCTCTCTTCATATAGAACCATGCTATATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR TCA 72 bp | AGGAAAATAATTCAGTCAACAAAGTACATAGAGGAATaGCAGTCAATGTTCTTCTCTAGCCCACATATGCTT | + |
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Preference number: 3 (lower is better) Translates to: RKIIQSTKYIEE*QSMFFSSPHML Trigger: AAGCATATGTGGGCTAGAGAAGAACATTGACTGTCATTCCTCTATGTACTTTGTTGACTGAATTATTTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR GCA 72 bp | ATGGTTCTATATGAAGAGAGGGGAGTGACTGGGTATTaGTTGTTTCTTAATTCATTTAGCTTAGAGATTTGT | + |
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Preference number: 3 (lower is better) Translates to: MVLYEERGVTGY*LFLNSFSLEIC Trigger: ACAAATCTCTAAGCTAAATGAATTAAGAAACAAGCAATACCCAGTCACTCCCCTCTCTTCATATAGAACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | ACACTGGGTGGCACCATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAAGGAGGAAGGTGGAGTaGCCAGGAGTGCTGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: TLGGTIPWARDPGLYKSGRRKVE*PGVLVL Trigger: CAATACCAGCACTCCTGGTCACTCCACCTTCCTCCT...TCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACCCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCTGGGTGAGCTGTTGCAGCATGTATGAGTCTAGGGTAGTTCACCTCTGGGAGAGGGTACTGATCTaGGGAAAGATCAGACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AAWVSCCSMYESRVVHLWERVLI*GKIRRR Trigger: GCGGCGTCTGATCTTTCCTCAGATCAGTACCCTCTC...CCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCTCACCCAGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | TTCCCACCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGGCCTGGAAAGCCAGTaGGGAGGAAGGTGGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FPPLAEELLAIDSYFWEAGLESQ*GGRWSD Trigger: GTCACTCCACCTTCCTCCTCACTGGCTTTCCAGGCC...TGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGGTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | TTCCCACCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGGAATGGAAACCCAGTaGTGGGAGGCCTCCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FPPLAEELLAIDSYFWEAGMETQ*WEASRP Trigger: AGGCCTGGAGGCCTCCCATCACTGGGTTTCCATTCC...TGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGGTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | TTCCCACCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAAACTTTGGCCACTGCTaGGTGAGGCAGGATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FPPLAEELLAIDSYFWEANFGHC*VRQDGG Trigger: GCCACCATCCTGCCTCACTCAGCAGTGGCCAAAGTT...TGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGGTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | ACACTGGGTGGCACCATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAAGTGGGAGAGGGTACTaGTCTGAGGAAAGATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TLGGTIPWARDPGLYKSGSGRGY*SEERSD Trigger: GTCTGATCTTTCCTCAGATCAGTACCCTCTCCCACT...TCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACCCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGGGTGAGCTGTTGCAGCATGTATGAGTCTAGGGTAGTTCACCTCTGGAGGGTTCATGAAGGGTaGCACCAAGAAGTGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: AAWVSCCSMYESRVVHLWRVHEG*HQEVQV Trigger: AACCTGCACTTCTTGGTGCCACCCTTCATGAACCCT...CCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCTCACCCAGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | CAAATAAAATCTCACCGTGGAGATGGGAGGTGGGCACAAATTCCCACCCCTAGCAGTGAGGCAGGATGGTaGCATAATGCAGAGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: QIKSHRGDGRWAQIPTPSSEAGW*HNAEDP Trigger: GGGATCCTCTGCATTATGCCACCATCCTGCCTCACT...GCTAGGGGTGGGAATTTGTGCCCACCTCCCATCTCCACGGTGAGATTTTATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAAGGGACTGGCTAAGTAACGATGCAGAGGTGTaGGACACACGTATTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IPWARDPGLYKSGRDWLSNDAEV*DTRIEC Trigger: GCACTCAATACGTGTGTCTCACACCTCTGCATCGTT...ACTTAGCCAGTCCCTTCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | ACACTGGGTGGCACCATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGATGGGCAAATAAAAGATaGGAACGATGCAGAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TLGGTIPWARDPGLYKSGWANKR*ERCRGV Trigger: CACACCTCTGCATCGTTCTCATCTTTTATTTGCCCA...TCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACCCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR GCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGGGTGGCACCAAGAAGTaGAGGTTAGCCATGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWGGTKK*RLAMST Trigger: CGTGCTCATGGCTAACCTGCACTTCTTGGTGCCACC...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTGCATTCAATAGCAGACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGGGCCAACCAGGCTGTTaGTGCGGGTGTCTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: WLAFNSRLFVNQIQPSVLGQPGC*CGCLSK Trigger: CTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCC...CAGAACGGAAGGCTGTATTTGGTTTACAAAGAGTCTGCTATTGAATGCAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR GCA 90 bp | ACACTGGGTGGCACCATTCCCTGGGCAAGAGATCCTGGGCTGTATAAGAGTGGAGATGAAAAACATCTGTaGTGCACAGAAATCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TLGGTIPWARDPGLYKSGDEKHL*CTEIEG Trigger: CCCTTCGATTTCTGTGCAGCACAGATGTTTTTCATC...TCCACTCTTATACAGCCCAGGATCTCTTGCCCAGGGAATGGTGCCACCCAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTGCATTCAATAGCAGACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGAGAGCCGCACCATGGTaGGGAAGGTGGAGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WLAFNSRLFVNQIQPSVLRAAPW*GRWRHR Trigger: TCTGTGCCTCCACCTTCCCCACCATGGTGCGGCTCT...CAGAACGGAAGGCTGTATTTGGTTTACAAAGAGTCTGCTATTGAATGCAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 72 bp | TTGGTCTGTGTGCATGCCTGTAGAGGGTTGTCTTGTTaGTTAAATGACCCAGTCCACACTGGGTGGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LVCVHACRGLSC*LNDPVHTGWHH Trigger: ATGGTGCCACCCAGTGTGGACTGGGTCATTTAACAAACAAGACAACCCTCTACAGGCATGCACACAGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTGCATTCAATAGCAGACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGAAGCCTTTCCCCGGGTaGTGCAATGCCCAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: WLAFNSRLFVNQIQPSVLKPFPG*CNAQHS Trigger: ACTGTGCTGGGCATTGCATCACCCGGGGAAAGGCTT...CAGAACGGAAGGCTGTATTTGGTTTACAAAGAGTCTGCTATTGAATGCAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR TCA 90 bp | CCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGACCACAGGGTTCATaGAGGGTGGCACCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PLAEELLAIDSYFWEAVKRPQGS*RVAPRS Trigger: ACTTCTTGGTGCCACCCTTCATGAACCCTGTGGTCT...TTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR GCA 90 bp | CCATGTACCTTCCACCCTCACACTCAAATTCATAGGCTCTTTTTCTTGAAATGTCCCCGGGTGATGCAATaGCCAGCACAGTCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: PCTFHPHTQIHRLFFLKCPRVMQ*PAQSVG Trigger: TCCTACGGACTGTGCTGGGCATTGCATCACCCGGGG...ACATTTCAAGAAAAAGAGCCTATGAATTTGAGTGTGAGGGTGGAAGGTACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | CCATGTACCTTCCACCCTCACACTCAAATTCATAGGCTCTTTTTCTTGAAATGTAGAAGAGCCGCACCATaGTGGGGAAGGTGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PCTFHPHTQIHRLFFLKCRRAAP*WGRWRH Trigger: GTGCCTCCACCTTCCCCACCATGGTGCGGCTCTTCT...ACATTTCAAGAAAAAGAGCCTATGAATTTGAGTGTGAGGGTGGAAGGTACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | GACAATAAGAAAACAATGTTTCCCAGACACAGCAGGGCAGTCAGTCGCATGTGGCTGAGTGAGGCAGGATaGTGGCATAATGCAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: DNKKTMFPRHSRAVSRMWLSEAG*WHNAED Trigger: ATCCTCTGCATTATGCCACCATCCTGCCTCACTCAG...CCACATGCGACTGACTGCCCTGCTGTGTCTGGGAAACATTGTTTTCTTATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTGCATTCAATAGCAGACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGTCAACCCTCTTCTGCTaGAAACGCCTTAAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WLAFNSRLFVNQIQPSVLSTLFC*KRLKKP Trigger: GGGCTTCTTAAGGCGTTTCCAGCAGAAGAGGGTTGA...CAGAACGGAAGGCTGTATTTGGTTTACAAAGAGTCTGCTATTGAATGCAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 72 bp | TACATCAAATTGGTCTGTGTGCATGCCTGTAGAGGGTaGTCTTGTTTGTTAAATGACCCAGTCCACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: YIKLVCVHACRG*SCLLNDPVHTG Trigger: CCCAGTGTGGACTGGGTCATTTAACAAACAAGACAACCCTCTACAGGCATGCACACAGACCAATTTGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR GCA 90 bp | TGGCTTGCATTCAATAGCAGACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGGAAAAACATCTGTGCTaGACAGAAATCGAAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WLAFNSRLFVNQIQPSVLEKHLC*TEIEGQ Trigger: CTGCCCTTCGATTTCTGTGCAGCACAGATGTTTTTC...CAGAACGGAAGGCTGTATTTGGTTTACAAAGAGTCTGCTATTGAATGCAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 72 bp | GCAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGTTaGGGGAAGACATATAAACACAGCTTACCTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: AIDSYFWEAVKS*GKTYKHSLPQV Trigger: CACCTGAGGTAAGCTGTGTTTATATGTCTTCCCCAAACTTTTAACTGCCTCCCAGAAATAGCTATCAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR GCA 90 bp | AGCTGTTGCAGCATGTATGAGTCTAGGGTAGTTCACCTCTGGTTTAATAAAACAATATCAACCCTCTTCTaGTGGAAACGCCTTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SCCSMYESRVVHLWFNKTISTLF*WKRLKK Trigger: CTTCTTAAGGCGTTTCCAGCAGAAGAGGGTTGATAT...TGTTTTATTAAACCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 72 bp | ACTCTTTGTAAACCAAATACAGCCTTCCGTTCTGTGTaGCTTTTTGTCTGGGTATTTTATTACAGTAACAGA | + |
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Preference number: 4 (lower is better) Translates to: TLCKPNTAFRSV*LFVWVFYYSNR Trigger: TCTGTTACTGTAATAAAATACCCAGACAAAAAGCAACACAGAACGGAAGGCTGTATTTGGTTTACAAAGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| 3UTR CAA 72 bp | TACCTCAGATTTATGAAATACAGGGGATATATGACATaGAGTTATACCACACCCTTACTTTCTCAACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: YLRFMKYRGYMT*SYTTPLLSQLC Trigger: ACAAAGTTGAGAAAGTAAGGGTGTGGTATAACTCAATGTCATATATCCCCTGTATTTCATAAATCTGAGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS CCA 90 bp | GGGTGGCACCAAGAAGTGCAGGTTAGCCATGAGCACGGCCAGAGCTaGGTAGCTGTGTTTCTCCACTCGGTGCAGCACGGACAGCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: GWHQEVQVSHEHGQS*VAVFLHSVQHGQPQ Trigger: TTGGGGCTGTCCGTGCTGCACCGAGTGGAGAAACACAGCTACCCAGCTCTGGCCGTGCTCATGGCTAACCTGCACTTCTTGGTGCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS TCA 90 bp | CTAGGCCTAGTGAGAGGAGGATGGAAACCAGGCCAACCAGGCTGTTaGTGCGGGTGTCTGAGCAAGCCAGTCCCACGAGGTCGCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGLVRGGWKPGQPGC*CGCLSKPVPRGRSA Trigger: TGCACTGCGACCTCGTGGGACTGGCTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCTGGTTTCCATCCTCCTCTCACTAGGCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS TCA 90 bp | TCTGAGGAAAGATCAGACGCCGCAGAAGGATGGGTCCGGGAAGGTTaGGCAGGATGGCCCTCACCAGAACAGCAGCCCCAACTTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SEERSDAAEGWVREG*AGWPSPEQQPQLWP Trigger: TGGCCAAAGTTGGGGCTGCTGTTCTGGTGAGGGCCATCCTGCTCAACCTTCCCGGACCCATCCTTCTGCGGCGTCTGATCTTTCCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS TCA 90 bp | GTCCCACGAGGTCGCAGTGCAGACAGTAGCAGTGGGAGAGGGTACTaGTCTGAGGAAAGATCAGACGCCGCAGAAGGATGGGTCCGGGAA | + |
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Preference number: 5 (lower is better) Translates to: VPRGRSADSSSGRGY*SEERSDAAEGWVRE Trigger: TTCCCGGACCCATCCTTCTGCGGCGTCTGATCTTTCCTCAGATCAGTACCCTCTCCCACTGCTACTGTCTGCACTGCGACCTCGTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CCA 90 bp | GATCTGCTTCGACTTGATACAGTAGACCACAGGGTTCATGAAGGGTaGCACCAAGAAGTGCAGGTTAGCCATGAGCACGGCCAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DLLRLDTVDHRVHEG*HQEVQVSHEHGQSW Trigger: CCAGCTCTGGCCGTGCTCATGGCTAACCTGCACTTCTTGGTGCCACCCTTCATGAACCCTGTGGTCTACTGTATCAAGTCGAAGCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS GCA 90 bp | CACACCAGATTCCACATAGGTGAAGGCGTGGATGAAAAACATCTGTaGTGCACAGAAATCGAAGGGCAGCTCCCGAGTACCCAGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HTRFHIGEGVDEKHL*CTEIEGQLPSTQPE Trigger: TTCTGGCTGGGTACTCGGGAGCTGCCCTTCGATTTCTGTGCAGCACAGATGTTTTTCATCCACGCCTTCACCTATGTGGAATCTGGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS-3UTR CAA 90 bp | CCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGTTAAAAGGCCAACCAGGCTGTaGATGCGGGTGTCTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: PLAEELLAIDSYFWEAVKRPTRL*MRVSEQ Trigger: TTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCT...TTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CAA 90 bp | AGCTGTTGCAGCATGTATGAGTCTAGGGTAGTTCACCTCTGGTTTAATAAAACAATGGGTCCGGGAAGGTaGAGCAGGATGGCCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: SCCSMYESRVVHLWFNKTMGPGR*SRMALT Trigger: GGTGAGGGCCATCCTGCTCAACCTTCCCGGACCCAT...TGTTTTATTAAACCAGAGGTGAACTACCCTAGACTCATACATGCTGCAACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS-3UTR CAA 90 bp | CCCCTAGCTGAGGAGCTATTGGCAATTGATAGCTATTTCTGGGAGGCAGTTAAAACCACACAGATGAGGTaGATGGGAATGGAAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: PLAEELLAIDSYFWEAVKTTQMR*MGMETQ Trigger: CTGGGTTTCCATTCCCATCAACCTCATCTGTGTGGT...TTTAACTGCCTCCCAGAAATAGCTATCAATTGCCAATAGCTCCTCAGCTAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216524.2 |
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| CDS TCA 72 bp | AGATCAGACGCCGCAGAAGGATGGGTCCGGGAAGGTTaGGCAGGATGGCCCTCACCAGAACAGCAGCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RSDAAEGWVREG*AGWPSPEQQPQ Trigger: TTGGGGCTGCTGTTCTGGTGAGGGCCATCCTGCTCAACCTTCCCGGACCCATCCTTCTGCGGCGTCTGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS TCA 72 bp | GGAAACCAGGCCAACCAGGCTGTTGATGCGGGTGTCTaGGCAAGCCAGTCCCACGAGGTCGCAGTGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: GNQANQAVDAGV*ASQSHEVAVQT Trigger: TGTCTGCACTGCGACCTCGTGGGACTGGCTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCTGGTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CAA 90 bp | TCTAGGCCTAGTGAGAGGAGGATGGAAACCAGGCCAACCAGGCTGTaGATGCGGGTGTCTGAGCAAGCCAGTCCCACGAGGTCGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SRPSERRMETRPTRL*MRVSEQASPTRSQC Trigger: GCACTGCGACCTCGTGGGACTGGCTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCTGGTTTCCATCCTCCTCTCACTAGGCCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CAA 72 bp | AGTGAGAGGAGGATGGAAACCAGGCCAACCAGGCTGTaGATGCGGGTGTCTGAGCAAGCCAGTCCCACGAGG | + |
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Preference number: 6 (lower is better) Translates to: SERRMETRPTRL*MRVSEQASPTR Trigger: CCTCGTGGGACTGGCTTGCTCAGACACCCGCATCAACAGCCTGGTTGGCCTGGTTTCCATCCTCCTCTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CCA 72 bp | CAAGAAGTGCAGGTTAGCCATGAGCACGGCCAGAGCTaGGTAGCTGTGTTTCTCCACTCGGTGCAGCACGGA | + |
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Preference number: 6 (lower is better) Translates to: QEVQVSHEHGQS*VAVFLHSVQHG Trigger: TCCGTGCTGCACCGAGTGGAGAAACACAGCTACCCAGCTCTGGCCGTGCTCATGGCTAACCTGCACTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS TCA 72 bp | GGTCGCAGTGCAGACAGTAGCAGTGGGAGAGGGTACTaGTCTGAGGAAAGATCAGACGCCGCAGAAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: GRSADSSSGRGY*SEERSDAAEGW Trigger: CCATCCTTCTGCGGCGTCTGATCTTTCCTCAGATCAGTACCCTCTCCCACTGCTACTGTCTGCACTGCGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CCA 72 bp | CGACTTGATACAGTAGACCACAGGGTTCATGAAGGGTaGCACCAAGAAGTGCAGGTTAGCCATGAGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: RLDTVDHRVHEG*HQEVQVSHEHG Trigger: GCCGTGCTCATGGCTAACCTGCACTTCTTGGTGCCACCCTTCATGAACCCTGTGGTCTACTGTATCAAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS GCA 72 bp | TTCCACATAGGTGAAGGCGTGGATGAAAAACATCTGTaGTGCACAGAAATCGAAGGGCAGCTCCCGAGTACC | + |
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Preference number: 6 (lower is better) Translates to: FHIGEGVDEKHL*CTEIEGQLPST Trigger: GGTACTCGGGAGCTGCCCTTCGATTTCTGTGCAGCACAGATGTTTTTCATCCACGCCTTCACCTATGTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CAA 72 bp | GCTGGATCCGTACGGATCAGGAAAAGGATAACGCTGTaGCCCAGGATGGAAACCACACAGATGAGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: AGSVRIRKRITL*PRMETTQMRLM Trigger: CATCAACCTCATCTGTGTGGTTTCCATCCTGGGCAACAGCGTTATCCTTTTCCTGATCCGTACGGATCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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| CDS CAA 90 bp | TCATGTAAGGCTGGATCCGTACGGATCAGGAAAAGGATAACGCTGTaGCCCAGGATGGAAACCACACAGATGAGGTTGATGGGAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SCKAGSVRIRKRITL*PRMETTQMRLMGME Trigger: TTCCATTCCCATCAACCTCATCTGTGTGGTTTCCATCCTGGGCAACAGCGTTATCCTTTTCCTGATCCGTACGGATCCAGCCTTACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098225.3 ENSMUST00000216524.2 |
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