Pregenerated sensors for OLFR545 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044824Ensembl transcript IDs: ENSMUST00000058750.4, ENSMUST00000216116.4
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGTGCCTGCGGAGGCCAGGAGAGGGCGCTGGCTATCCTGGAGCTaGAGATACAGATTGTCTCACATGGTGCTGAGAATGGGCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: KVPAEARRGRWLSWS*RYRLSHMVLRMGFL Trigger: CAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTGTATCTCCAGCTCCAGGATAGCCAGCGCCCTCTCCTGGCCTCCGCAGGCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 90 bp | GCCGCAATGATGGTGGGACATATGGGGCACAAGGTAGACAGTGGGTaGAGGGGACAAATTAGAACACGATGCCATGGACACAAGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: AAMMVGHMGHKVDSG*RGQIRTRCHGHKCN Trigger: ATTACACTTGTGTCCATGGCATCGTGTTCTAATTTGTCCCCTTCACCCACTGTCTACCTTGTGCCCCATATGTCCCACCATCATTGCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR GCA 90 bp | GGCTGGCACAAATTCATGCCTGTCCTCCTGTCTTTACCTCTCAAGTaGTGGGATGATAGTTCTGTGTCACCATTTCCAACCTCAATAATA | + |
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Preference number: 1 (lower is better) Translates to: GWHKFMPVLLSLPLK*WDDSSVSPFPTSII Trigger: TATTATTGAGGTTGGAAATGGTGACACAGAACTATCATCCCAGCACTTGAGAGGTAAAGACAGGAGGACAGGCATGAATTTGTGCCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 90 bp | TGGCACAAATTCATGCCTGTCCTCCTGTCTTTACCTCTCAAGTGCTaGGATGATAGTTCTGTGTCACCATTTCCAACCTCAATAATATTA | + |
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Preference number: 1 (lower is better) Translates to: WHKFMPVLLSLPLKC*DDSSVSPFPTSIIL Trigger: TAATATTATTGAGGTTGGAAATGGTGACACAGAACTATCATCCCAGCACTTGAGAGGTAAAGACAGGAGGACAGGCATGAATTTGTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 90 bp | AGGTGCCCTAGGTGGTCAGCTGGAGTTATGGCAGCTGCGAGAGAGTaGACATGGGTGCTGGGAACAGAAAACAAGACCCCTGGAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RCPRWSAGVMAAARE*TWVLGTENKTPGGG Trigger: CCCTCCTCCAGGGGTCTTGTTTTCTGTTCCCAGCACCCATGTCAACTCTCTCGCAGCTGCCATAACTCCAGCTGACCACCTAGGGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 90 bp | GAGGCCAGGAGAGGGCGCTGGCTATCCTGGAGCTGGAGATACAGATaGTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EARRGRWLSWSWRYR*SHMVLRMGFLQGQN Trigger: ATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTGTATCTCCAGCTCCAGGATAGCCAGCGCCCTCTCCTGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATTGTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTAGGTGGGCGGGCCAAATaGGAAAGGAAAGCCGCAATG | + |
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Preference number: 2 (lower is better) Translates to: QIVSHGAENGLSARAECLGGRAK*ERKAAM Trigger: CATTGCGGCTTTCCTTTCTCATTTGGCCCGCCCACC...TAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR GCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCTGCCATGTACACAGGTaGCCTAGGTGGTCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPACHVHR*PRWSAG Trigger: TCCAGCTGACCACCTAGGGCACCTGTGTACATGGCA...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCGTGACTGGAAGTTTGTaGGAAGGAGCAACGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPAVTGSL*EGATRG Trigger: CCCTCTCGTTGCTCCTTCCCACAAACTTCCAGTCAC...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCCCAGACAGACCAGGCTaGCACAAATTCATGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPAPDRPG*HKFMPV Trigger: GACAGGCATGAATTTGTGCCAGCCTGGTCTGTCTGG...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCATAATGGAATGCCTGTaGTCTGAAGGTGGGCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSIMECL*SEGGRA Trigger: GGCCCGCCCACCTTCAGATCACAGGCATTCCATTAT...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCATATGTAGATTTGGCTaGCCTAGGACCTGCCAGACA | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPAICRFG*PRTCQT Trigger: TGTCTGGCAGGTCCTAGGTCAGCCAAATCTACATAT...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCAAGGTAGACAGTGGGTaGAGGGGACAAATTAGAACA | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPAKVDSG*RGQIRT Trigger: TGTTCTAATTTGTCCCCTTCACCCACTGTCTACCTT...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCAGCCATGTTTGTAGAGTGAGTTCTAGGATAGCTGATCTATGCAGAGAAGGAATGCCTGTGATCTaGAGGTGGGCGGGCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: FFSHVCRVSSRIADLCREGMPVI*RWAGQM Trigger: CATTTGGCCCGCCCACCTTCAGATCACAGGCATTCC...TTCTCTGCATAGATCAGCTATCCTAGAACTCACTCTACAAACATGGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CCA 90 bp | CAGATTGTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTATCTATTCTAGGTGACTaGAAGTTTGTGGGAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QIVSHGAENGLSARAECLSILGD*KFVGRS Trigger: GCTCCTTCCCACAAACTTCCAGTCACCTAGAATAGA...TAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAACAATATTGATCTTTTCAGTGCTAAGGATCAAATCCAGGGCCCCGAGGGGAGTAATAGACTCTTTTaGAAAGCTGGCACCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SNNIDLFSAKDQIQGPEGSNRLF*KAGTQM Trigger: CATCTGGGTGCCAGCTTTTCAAAAGAGTCTATTACT...CCCCTCGGGGCCCTGGATTTGATCCTTAGCACTGAAAAGATCAATATTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCTTACCTCTCAAGTGCTaGGATGATAGTTCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LTFNSSTEGRDRQIFRPALPLKC*DDSSVS Trigger: TGACACAGAACTATCATCCCAGCACTTGAGAGGTAA...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATTGTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTAATGAAAATGCCGTGGTaGAACCTATTGTTTTGTATG | + |
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Preference number: 2 (lower is better) Translates to: QIVSHGAENGLSARAECLMKMPW*NLLFCM Trigger: CATACAAAACAATAGGTTTCACCACGGCATTTTCAT...TAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR TCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCGAAGGTCTTTTTGGGTaGGAGCTCTCAGAAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSEGLFG*ELSEGI Trigger: TATTCCTTCTGAGAGCTCTCACCCAAAAAGACCTTC...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCTCTGTACCCATTTCTTaGCTTCCTCAGTTTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSSVPIS*LPQFHQ Trigger: CTGGTGAAACTGAGGAAGGCAAGAAATGGGTACAGA...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTATTTAACTCTGTAAACCTGCATTaGATGAAGGTCTTTTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VSHGAENGLSARAECLFNSVNLH*MKVFLG Trigger: ACCCAAAAAGACCTTCATGCAATGCAGGTTTACAGA...GTTAAATAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCACTCTTTTGAAAAGCTaGCACCCAGATGTCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSTLLKS*HPDVKM Trigger: CATCTTGACATCTGGGTGCCAGCTTTTCAAAAGAGT...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | GTGCCTGCGGAGGCCAGGAGAGGGCGCTGGCTATCCTaGAGCTGGAGATACAGATTGTCTCACATGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPAEARRGRWLS*SWRYRLSHMVL Trigger: CAGCACCATGTGAGACAATCTGTATCTCCAGCTCCAGGATAGCCAGCGCCCTCTCCTGGCCTCCGCAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | AGGTACACGCCCCCTCTCCCTCACCTCTATTCTAGGTaGCTGGAAGTTTGTGGGAAGGAGCAACGAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RYTPPLPHLYSR*LEVCGKEQREG Trigger: TCCCTCTCGTTGCTCCTTCCCACAAACTTCCAGTCACCTAGAATAGAGGTGAGGGAGAGGGGGCGTGTACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR GCA 72 bp | AGGACCTGCCAGACAGACCAGGCTGGCACAAATTCATaGCTGTCCTCCTGTCTTTACCTCTCAAGTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RTCQTDQAGTNS*LSSCLYLSSAG Trigger: CCCAGCACTTGAGAGGTAAAGACAGGAGGACAGGCATGAATTTGTGCCAGCCTGGTCTGTCTGGCAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | AGGAGCAACGAGAGGGATAATGGAATGCCTGTGATCTaGAGGTGGGCGGGCCAAATGAGAAAGGAAAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: RSNERDNGMPVI*RWAGQMRKESR Trigger: GCGGCTTTCCTTTCTCATTTGGCCCGCCCACCTTCAGATCACAGGCATTCCATTATCCCTCTCGTTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | TCAGCTGGAGTTATGGCAGCTGCGAGAGAGTTGACATaGGTGCTGGGAACAGAAAACAAGACCCCTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SAGVMAAARELT*VLGTENKTPGG Trigger: TCCTCCAGGGGTCTTGTTTTCTGTTCCCAGCACCCATGTCAACTCTCTCGCAGCTGCCATAACTCCAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | ACACGCCCCCTCTCCCTCACCTCTATTCTAGGTGACTaGAAGTTTGTGGGAAGGAGCAACGAGAGGGATAAT | + |
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Preference number: 3 (lower is better) Translates to: TRPLSLTSILGD*KFVGRSNERDN Trigger: ATTATCCCTCTCGTTGCTCCTTCCCACAAACTTCCAGTCACCTAGAATAGAGGTGAGGGAGAGGGGGCGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | TATTCATGTGTGTGCCATGTACACAGGTGCCCTAGGTaGTCAGCTGGAGTTATGGCAGCTGCGAGAGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: YSCVCHVHRCPR*SAGVMAAAREL Trigger: CAACTCTCTCGCAGCTGCCATAACTCCAGCTGACCACCTAGGGCACCTGTGTACATGGCACACACATGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | ATGGTGGGACATATGGGGCACAAGGTAGACAGTGGGTaGAGGGGACAAATTAGAACACGATGCCATGGACAC | + |
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Preference number: 3 (lower is better) Translates to: MVGHMGHKVDSG*RGQIRTRCHGH Trigger: GTGTCCATGGCATCGTGTTCTAATTTGTCCCCTTCACCCACTGTCTACCTTGTGCCCCATATGTCCCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR GCA 72 bp | AATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATaGACATTAGGAAAAGGTGCCTGCGGAGGCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NECVCVCVCVCV*TLGKGACGGQE Trigger: CTCCTGGCCTCCGCAGGCACCTTTTCCTAATGTGCATACACACACACACACACACACACACACACACTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | CCTGGAGCTGGAGATACAGATTGTCTCACATGGTGCTaGGAATGGGCTTTCTGCAAGGGCAGAATGCTTATT | + |
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Preference number: 3 (lower is better) Translates to: PGAGDTDCLTWC*EWAFCKGRMLI Trigger: AATAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTGTATCTCCAGCTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTATTTAACCATGGTGGTAGCAGTTaGGTCCCTCTGTACCCATTT | + |
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Preference number: 3 (lower is better) Translates to: VSHGAENGLSARAECLFNHGGSS*VPLYPF Trigger: AAATGGGTACAGAGGGACCAAACTGCTACCACCATG...GTTAAATAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTATTTAACCTCTGTACCCATTTCTaGCCTTCCTCAGTTTCACCA | + |
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Preference number: 3 (lower is better) Translates to: VSHGAENGLSARAECLFNLCTHF*PSSVSP Trigger: TGGTGAAACTGAGGAAGGCAAGAAATGGGTACAGAG...GTTAAATAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR GCA 72 bp | AAATTCATGCCTGTCCTCCTGTCTTTACCTCTCAAGTaGTGGGATGATAGTTCTGTGTCACCATTTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: KFMPVLLSLPLK*WDDSSVSPFPT Trigger: GGTTGGAAATGGTGACACAGAACTATCATCCCAGCACTTGAGAGGTAAAGACAGGAGGACAGGCATGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | ATAAACCTAGTAAGCATGAGCATGGTGGTAGCAGTTTaGTCCCTCTGTACCCATTTCTTGCCTTCCTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: INLVSMSMVVAV*SLCTHFLPSSV Trigger: AACTGAGGAAGGCAAGAAATGGGTACAGAGGGACCAAACTGCTACCACCATGCTCATGCTTACTAGGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | ATCTGTAAACCTGCATTGCATGAAGGTCTTTTTGGGTaGGAGCTCTCAGAAGGAATAGACACGGATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: ICKPALHEGLFG*ELSEGIDTDVF Trigger: GAAGACATCCGTGTCTATTCCTTCTGAGAGCTCTCACCCAAAAAGACCTTCATGCAATGCAGGTTTACAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR GCA 72 bp | GACTCCACGTTTAAAACACCATCTGTAAACCTGCATTaGATGAAGGTCTTTTTGGGTGAGAGCTCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: DSTFKTPSVNLH*MKVFLGESSQK Trigger: CTTCTGAGAGCTCTCACCCAAAAAGACCTTCATGCAATGCAGGTTTACAGATGGTGTTTTAAACGTGGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCAGCCATGTTTGTAGAGTGAGTTCTAGGATAGCTGATCTATGCAGAGAATGCATGAAGGTCTTTTaGGGTGAGAGCTCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: FFSHVCRVSSRIADLCRECMKVF*GESSQK Trigger: CTTCTGAGAGCTCTCACCCAAAAAGACCTTCATGCA...TTCTCTGCATAGATCAGCTATCCTAGAACTCACTCTACAAACATGGCTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CCA 72 bp | TTTAGACTTAGTCCTATTGAGAATCAGAGTGAGCCATaGCCTGGGACAACAGTAAATTACCTTGGAATAGTC | + |
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Preference number: 3 (lower is better) Translates to: FRLSPIENQSEP*PGTTVNYLGIV Trigger: GACTATTCCAAGGTAATTTACTGTTGTCCCAGGCCATGGCTCACTCTGATTCTCAATAGGACTAAGTCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR TCA 72 bp | GGTCCAACAGTTTGCAAGGAATCAACTAGGAGTGACTaGGAGGAGGCTCAGCTATTTATTCATGTAAATATT | + |
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Preference number: 3 (lower is better) Translates to: GPTVCKESTRSD*EEAQLFIHVNI Trigger: AATATTTACATGAATAAATAGCTGAGCCTCCTCTCAGTCACTCCTAGTTGATTCCTTGCAAACTGTTGGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 72 bp | AGGTGGTCAGCTGGAGTTATGGCAGCTGCGAGAGAGTaGACATGGGTGCTGGGAACAGAAAACAAGACCCCT | + |
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Preference number: 4 (lower is better) Translates to: RWSAGVMAAARE*TWVLGTENKTP Trigger: AGGGGTCTTGTTTTCTGTTCCCAGCACCCATGTCAACTCTCTCGCAGCTGCCATAACTCCAGCTGACCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR TCA 90 bp | AGCAACAATATTGATCTTTTCAGTGCTAAGGATCAAATCCAGGGCCCCGAGGGGTCACCAGGTAGAGGCTaGGGAAGGGCAGCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SNNIDLFSAKDQIQGPEGSPGRG*GRAAPG Trigger: TCCTGGTGCTGCCCTTCCTCAGCCTCTACCTGGTGA...CCCCTCGGGGCCCTGGATTTGATCCTTAGCACTGAAAAGATCAATATTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR TCA 90 bp | CAAATGAGAAAGGAAAGCCGCAATGATGGTGGGACATATGGGGCACAAGGTAGACCAGGAGCAGGGCAATaGGCAGGTACATGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QMRKESRNDGGTYGAQGRPGAGQ*AGTWAG Trigger: ACCAGCCCATGTACCTGCTCATTGCCCTGCTCCTGG...TCTACCTTGTGCCCCATATGTCCCACCATCATTGCGGCTTTCCTTTCTCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 72 bp | AGAGGGCGCTGGCTATCCTGGAGCTGGAGATACAGATaGTCTCACATGGTGCTGAGAATGGGCTTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RGRWLSWSWRYR*SHMVLRMGFLQ Trigger: TTGCAGAAAGCCCATTCTCAGCACCATGTGAGACAATCTGTATCTCCAGCTCCAGGATAGCCAGCGCCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR TCA 90 bp | CCCCTCTCCCTCACCTCTATTCTAGGTGACTGGAAGTTTGTGGGAAGGAGCAACACGGTAGACAATGGATaGGGACATGGTGGAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: PLSLTSILGDWKFVGRSNTVDNG*GHGGGV Trigger: TACTCCTCCACCATGTCCTCATCCATTGTCTACCGT...GTTGCTCCTTCCCACAAACTTCCAGTCACCTAGAATAGAGGTGAGGGAGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCCTCACCTCTATTCTAGGTGACTGGAAGTTTGTGGGAAGGAGCAACAGGACTCATTGTAGGTaGCATTGCTCCAACCCAACA | + |
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Preference number: 4 (lower is better) Translates to: PLSLTSILGDWKFVGRSNRTHCR*HCSNPT Trigger: TGTTGGGTTGGAGCAATGGCACCTACAATGAGTCCT...GTTGCTCCTTCCCACAAACTTCCAGTCACCTAGAATAGAGGTGAGGGAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR GCA 90 bp | CTCACCTTTAATTCCAGTACTGAAGGCAGAGACAGGCAGATTTTTAGGCCAGCCGCACTGAGCAGGTTGTaGACATCTTGGGAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LTFNSSTEGRDRQIFRPAALSRL*TSWEAV Trigger: CACTGCCTCCCAAGATGTGCACAACCTGCTCAGTGC...GGCTGGCCTAAAAATCTGCCTGTCTCTGCCTTCAGTACTGGAATTAAAGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR TCA 90 bp | GTCTCACATGGTGCTGAGAATGGGCTTTCTGCAAGGGCAGAATGCTTATTTAACTTACCAGGTGCTGCCTaGTTTCCTTGGTTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VSHGAENGLSARAECLFNLPGAA*FPWFWP Trigger: GGGCCAGAACCAAGGAAATCAGGCAGCACCTGGTAA...GTTAAATAAGCATTCTGCCCTTGCAGAAAGCCCATTCTCAGCACCATGTGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR TCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCGCCTGCACTCAGGAATaGCCTTACCAGGTGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSACTQE*PYQVLP Trigger: AGGCAGCACCTGGTAAGGTCATTCCTGAGTGCAGGC...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR GCA 90 bp | GGCTGGCACAAATTCATGCCTGTCCTCCTGTCTTTACCTCTCAAGTGCTGGGATAAACCAGAAAGTAGATaGAGAACATCTGTCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GWHKFMPVLLSLPLKCWDKPESR*RTSVPS Trigger: GCTTGGGACAGATGTTCTGCATCTACTTTCTGGTTT...ATCCCAGCACTTGAGAGGTAAAGACAGGAGGACAGGCATGAATTTGTGCCAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR GCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCCATCTTGGGAGGCAGTaGGAGCCACACGGTAGACAA | + |
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Preference number: 4 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSHLGRQ*EPHGRQ Trigger: TTGTCTACCGTGTGGCTCGCACTGCCTCCCAAGATG...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR CCA 90 bp | TTTAATAAGCTGTGTATTTTTGAGCCATGGCACCTTCAGAGACCATGCAGTAGCGGCCAGCACCACCACTaGAGCAACAATGCTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FNKLCIFEPWHLQRPCSSGQHHH*SNNACA Trigger: AGCACAAGCATTGTTGCTCCAGTGGTGGTGCTGGCC...GCTACTGCATGGTCTCTGAAGGTGCCATGGCTCAAAAATACACAGCTTATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 72 bp | AATAAACCTAGTAAGCATGAGCATGGTGGTAGCAGTTaGGTCCCTCTGTACCCATTTCTTGCCTTCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: NKPSKHEHGGSS*VPLYPFLAFLS Trigger: ACTGAGGAAGGCAAGAAATGGGTACAGAGGGACCAAACTGCTACCACCATGCTCATGCTTACTAGGTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| 3UTR CAA 72 bp | TCTTCTATCCCCTCCACCTACTTACTAGCAACAATATaGATCTTTTCAGTGCTAAGGATCAAATCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSIPSTYLLATI*IFSVLRIKSRA Trigger: GGCCCTGGATTTGATCCTTAGCACTGAAAAGATCAATATTGTTGCTAGTAAGTAGGTGGAGGGGATAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS GCA 90 bp | CAGGGCAATGAGCAGGTACATGGGCTGGTGCAGGCTGCGCTGGGATaGCACCGTGTGGATGACCAGGGCATTGGTGAAGAGGATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: QGNEQVHGLVQAALG*HRVDDQGIGEEDHQ Trigger: CTGGTGATCCTCTTCACCAATGCCCTGGTCATCCACACGGTGGCATCCCAGCGCAGCCTGCACCAGCCCATGTACCTGCTCATTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS GCA 90 bp | ATATTGACAGCCAGGAGCAGGGCAATGAGCAGGTACATGGGCTGGTaGAGGCTGCGCTGGGATGCCACCGTGTGGATGACCAGGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: ILTARSRAMSRYMGW*RLRWDATVWMTRAL Trigger: CAATGCCCTGGTCATCCACACGGTGGCATCCCAGCGCAGCCTGCACCAGCCCATGTACCTGCTCATTGCCCTGCTCCTGGCTGTCAATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS TCA 90 bp | GCGAGGCCAGCACCACCACTGGAGCAACAATGCTTGTGCTCCTGGTaGCTGCCAACACCACCAGACCAGCCAGTAACTGTCCTGTCACTA | + |
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Preference number: 5 (lower is better) Translates to: ARPAPPLEQQCLCSW*LPTPPDQPVTVLSL Trigger: TAGTGACAGGACAGTTACTGGCTGGTCTGGTGGTGTTGGCAGTCACCAGGAGCACAAGCATTGTTGCTCCAGTGGTGGTGCTGGCCTCGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS GCA 90 bp | TTATTCAGCGAGATGTCTCCACAGGAAAGCTTCATCAGGGCCATGTaGTCACAGGCAAAGTGGCGGATCACATCTGAGCGGCAGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LFSEMSPQESFIRAM*SQAKWRITSERQKR Trigger: TCGCTTCTGCCGCTCAGATGTGATCCGCCACTTTGCCTGTGAGCACATGGCCCTGATGAAGCTTTCCTGTGGAGACATCTCGCTGAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS-3UTR CAA 90 bp | AGCAACAATATTGATCTTTTCAGTGCTAAGGATCAAATCCAGGGCCCCGAGGGGTGGATGACCAGGGCATaGGTGAAGAGGATCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: SNNIDLFSAKDQIQGPEGWMTRA*VKRITR Trigger: CCTGGTGATCCTCTTCACCAATGCCCTGGTCATCCA...CCCCTCGGGGCCCTGGATTTGATCCTTAGCACTGAAAAGATCAATATTGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGCCATGTTTGTAGAGTGAGTTCTAGGATAGCTGATCTATGCAGAGAAGTGGCAGCACAGATATaGACAGCCAGGAGCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: FFSHVCRVSSRIADLCREVAAQI*TARSRA Trigger: TGCCCTGCTCCTGGCTGTCAATATCTGTGCTGCCAC...TTCTCTGCATAGATCAGCTATCCTAGAACTCACTCTACAAACATGGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS-3UTR CAA 90 bp | TTTTTCAGCCATGTTTGTAGAGTGAGTTCTAGGATAGCTGATCTATGCAGAGAAAAAGCACTGAGCAGGTaGTGCACATCTTGGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FFSHVCRVSSRIADLCREKALSR*CTSWEA Trigger: TGCCTCCCAAGATGTGCACAACCTGCTCAGTGCTTT...TTCTCTGCATAGATCAGCTATCCTAGAACTCACTCTACAAACATGGCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216116.4 |
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| CDS CCA 72 bp | GCGGCAGAAGCGAACCCGCGAGGCCAGCACCACCACTaGAGCAACAATGCTTGTGCTCCTGGTGACTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: AAEANPRGQHHH*SNNACAPGDCQ Trigger: TTGGCAGTCACCAGGAGCACAAGCATTGTTGCTCCAGTGGTGGTGCTGGCCTCGCGGGTTCGCTTCTGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS CCA 72 bp | GAAAGCTTCATCAGGGCCATGTGCTCACAGGCAAAGTaGCGGATCACATCTGAGCGGCAGAAGCGAACCCGC | + |
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Preference number: 6 (lower is better) Translates to: ESFIRAMCSQAK*RITSERQKRTR Trigger: GCGGGTTCGCTTCTGCCGCTCAGATGTGATCCGCCACTTTGCCTGTGAGCACATGGCCCTGATGAAGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS TCA 72 bp | GCACCACCACTGGAGCAACAATGCTTGTGCTCCTGGTaGCTGCCAACACCACCAGACCAGCCAGTAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: APPLEQQCLCSW*LPTPPDQPVTV Trigger: GACAGTTACTGGCTGGTCTGGTGGTGTTGGCAGTCACCAGGAGCACAAGCATTGTTGCTCCAGTGGTGGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS TCA 72 bp | TTGGGAGGCAGTGCGAGCCACACGGTAGACAATGGATaGGGACATGGTGGAGGAGTAGACGGTGAAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: LGGSASHTVDNG*GHGGGVDGEDD Trigger: GTCATCTTCACCGTCTACTCCTCCACCATGTCCTCATCCATTGTCTACCGTGTGGCTCGCACTGCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS GCA 72 bp | GAGATGTCTCCACAGGAAAGCTTCATCAGGGCCATGTaGTCACAGGCAAAGTGGCGGATCACATCTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: EMSPQESFIRAM*SQAKWRITSER Trigger: CCGCTCAGATGTGATCCGCCACTTTGCCTGTGAGCACATGGCCCTGATGAAGCTTTCCTGTGGAGACATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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| CDS CAA 72 bp | CAACAGATAGAAAGCACTGAGCAGGTTGTGCACATCTaGGGAGGCAGTGCGAGCCACACGGTAGACAATGGA | + |
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Preference number: 6 (lower is better) Translates to: QQIESTEQVVHI*GGSASHTVDNG Trigger: TCCATTGTCTACCGTGTGGCTCGCACTGCCTCCCAAGATGTGCACAACCTGCTCAGTGCTTTCTATCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058750.4 ENSMUST00000216116.4 |
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