Pregenerated sensors for OLFR538 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095901Ensembl transcript IDs: ENSMUST00000084457.3, ENSMUST00000210973.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGAAGCTGGTGTTTTTATTTACAGTGACTTAAAGAAGTTACAGTaGGTAGAATTGTGCAGTCTTCTCATCAGACAGAGGTTTTCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: DEAGVFIYSDLKKLQ*VELCSLLIRQRFSK Trigger: TTTAGAAAACCTCTGTCTGATGAGAAGACTGCACAATTCTACTCACTGTAACTTCTTTAAGTCACTGTAAATAAAAACACCAGCTTCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTATCTCTGTTACACTGGTTGCATCCCCACTCAAACCAGTTTCACTGGCTTTTTCTTTCCAAGATATTaGGGCCATATTGGCCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LYLCYTGCIPTQTSFTGFFFPRY*GHIGPS Trigger: TGAGGGGCCAATATGGCCTCAATATCTTGGAAAGAA...AAAGCCAGTGAAACTGGTTTGAGTGGGGATGCAACCAGTGTAACAGAGATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| 3UTR-3UTR CCA 90 bp | CATATTGGCCCCTCAAGTTTACTTATGAAATCTAGGTTGATGAGCTGTAGTTCTGGAACCATACAGCCCTaGAGAATAGACTACATATCT | + |
|
Preference number: 2 (lower is better) Translates to: HIGPSSLLMKSRLMSCSSGTIQP*RIDYIS Trigger: AGATATGTAGTCTATTCTCCAGGGCTGTATGGTTCC...AGAACTACAGCTCATCAACCTAGATTTCATAAGTAAACTTGAGGGGCCAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR GCA 90 bp | CTTTATCTCTGTTACACTGGTTGCATCCCCACTCAAACCAGTTTCACTGGCTTTAGCCACGGCCAGAGCTaGACACAGCTGTGGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLCYTGCIPTQTSFTGFSHGQS*TQLWAH Trigger: ATGAGCCCACAGCTGTGTGCAGCTCTGGCCGTGGCT...AAAGCCAGTGAAACTGGTTTGAGTGGGGATGCAACCAGTGTAACAGAGATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCTTCCCTTAGGAGAGCGTTTTGGGAACCATACAGCCCTGGAGAATAGAAGCTGCACACAGCTGTaGGCTCATTCTAGAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MRLPLGERFGNHTALENRSCTQL*AHSRAV Trigger: TACAGCTCTAGAATGAGCCCACAGCTGTGTGCAGCT...TCTATTCTCCAGGGCTGTATGGTTCCCAAAACGCTCTCCTAAGGGAAGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| 3UTR CAA 72 bp | CTGGTTGCATCCCCACTCAAACCAGTTTCACTGGCTTaGATGTCCACAGCACAGCTGGGAGCTGTGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LVASPLKPVSLA*MSTAQLGAVKL Trigger: TAATTTCACAGCTCCCAGCTGTGCTGTGGACATCAAAGCCAGTGAAACTGGTTTGAGTGGGGATGCAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR GCA 90 bp | ACCAGTTTCACTGGCTTTGATGTCCACAGCACAGCTGGGAGCTGTGAAATTACAAAAAGGCCTTCCTCTTaGCCTCAGCAGAACGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSFTGFDVHSTAGSCEITKRPSS*PQQNAC Trigger: ACATGCGTTCTGCTGAGGGCAAGAGGAAGGCCTTTT...TGTAATTTCACAGCTCCCAGCTGTGCTGTGGACATCAAAGCCAGTGAAACTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCTTCCCTTAGGAGAGCGTTTTGGGAACCATACAGCCCTGGAGAATAGAAGAAGAAAGAAGAGCTaGGCCATGCATCCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MRLPLGERFGNHTALENRRRKKS*AMHPLK Trigger: CTTCAAAGGATGCATGGCCCAGCTCTTCTTTCTTCT...TCTATTCTCCAGGGCTGTATGGTTCCCAAAACGCTCTCCTAAGGGAAGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CCA 90 bp | CATATTGGCCCCTCAAGTTTACTTATGAAATCTAGGTTGATGAGCTGTAGTTCTCATTCACAGCACAGATaGACCATACAGCCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIGPSSLLMKSRLMSCSSHSQHR*TIQPRP Trigger: TGGCCGTGGCTGTATGGTCCATCTGTGCTGTGAATG...AGAACTACAGCTCATCAACCTAGATTTCATAAGTAAACTTGAGGGGCCAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR TCA 90 bp | ATTACAAGCCTGAGTCACTCTATTCTTTATTCTTTCCAAGATATTGAGGCCATAGGCACAGAACAGAGATaGGTAGTACACAGAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITSLSHSILYSFQDIEAIGTEQR*VVHRNH Trigger: GTGGTTTCTGTGTACTACTCATCTCTGTTCTGTGCC...TATGGCCTCAATATCTTGGAAAGAATAAAGAATAGAGTGACTCAGGCTTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR GCA 90 bp | ATTCTTTATTCTTTCCAAGATATTGAGGCCATATTGGCCCCTCAAGTTTACTTAGCCAGTGTGTACAGATaGATTCACAGCACAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILYSFQDIEAILAPQVYLASVYR*IHSTDG Trigger: TCCATCTGTGCTGTGAATGCATCTGTACACACTGGC...TAAGTAAACTTGAGGGGCCAATATGGCCTCAATATCTTGGAAAGAATAAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR GCA 90 bp | CATATTGGCCCCTCAAGTTTACTTATGAAATCTAGGTTGATGAGCTGTAGTTCTCCATGGTTGCTAAGTTaGATAGGAAAAAGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HIGPSSLLMKSRLMSCSSPWLLS*IGKSTW Trigger: CCATGTACTTTTTCCTATGCAACTTAGCAACCATGG...AGAACTACAGCTCATCAACCTAGATTTCATAAGTAAACTTGAGGGGCCAATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CCA 90 bp | ATTCTTTATTCTTTCCAAGATATTGAGGCCATATTGGCCCCTCAAGTTTACTTAAAATTTGCTTCTTTCTaGGCTGTAGCTGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILYSFQDIEAILAPQVYLKFASF*AVAGSR Trigger: CCTGCTTCCAGCTACAGCCCAGAAAGAAGCAAATTT...TAAGTAAACTTGAGGGGCCAATATGGCCTCAATATCTTGGAAAGAATAAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCTTCCCTTAGGAGAGCGTTTTGGGAACCATACAGCCCTGGAGAATAGAAGACCAACCAGCGCCTaGGGCAGCACAGAGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MRLPLGERFGNHTALENRRPTSA*GSTEEV Trigger: TACCTCCTCTGTGCTGCCCAAGGCGCTGGTTGGTCT...TCTATTCTCCAGGGCTGTATGGTTCCCAAAACGCTCTCCTAAGGGAAGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CAA 90 bp | ACCAGTTTCACTGGCTTTGATGTCCACAGCACAGCTGGGAGCTGTGAAATTACATCCATGGTTGCTAAGTaGCATAGGAAAAAGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: TSFTGFDVHSTAGSCEITSMVAK*HRKKYM Trigger: CATGTACTTTTTCCTATGCAACTTAGCAACCATGGA...TGTAATTTCACAGCTCCCAGCTGTGCTGTGGACATCAAAGCCAGTGAAACTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS-3UTR CAA 90 bp | ATTACAAGCCTGAGTCACTCTATTCTTTATTCTTTCCAAGATATTGAGGCCATATGGGCCATGCATCCTTaGAAGGAGATGGTATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ITSLSHSILYSFQDIEAIWAMHP*KEMVFS Trigger: AGAAAATACCATCTCCTTCAAAGGATGCATGGCCCA...TATGGCCTCAATATCTTGGAAAGAATAAAGAATAGAGTGACTCAGGCTTGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210973.3 |
||
| CDS GCA 72 bp | CACAGCACAGATGGACCATACAGCCACGGCCAGAGCTaGACACAGCTGTGGGCTCATTCTAGAGCTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSTDGPYSHGQS*TQLWAHSRAVV Trigger: CACTACAGCTCTAGAATGAGCCCACAGCTGTGTGCAGCTCTGGCCGTGGCTGTATGGTCCATCTGTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084457.3 ENSMUST00000210973.3 |
||
| CDS GCA 72 bp | AGGAACAGTCTTAGACTCGGGTGCTCTGAGAACCCTTaGAGCACAAACTCTGTCACTACTGTCTGGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RNSLRLGCSENP*STNSVTTVWLG Trigger: TCCCAACCAGACAGTAGTGACAGAGTTTGTGCTGCAAGGGTTCTCAGAGCACCCGAGTCTAAGACTGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084457.3 ENSMUST00000210973.3 |
||
| CDS GCA 72 bp | AGGAAACAGCCCATCAGGAACAGTCTTAGACTCGGGTaGTCTGAGAACCCTTGCAGCACAAACTCTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: RKQPIRNSLRLG*SENPCSTNSVT Trigger: AGTGACAGAGTTTGTGCTGCAAGGGTTCTCAGAGCACCCGAGTCTAAGACTGTTCCTGATGGGCTGTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084457.3 ENSMUST00000210973.3 |
||
| CDS CAA 72 bp | ATGGTATTTTCTTCATACAGTAGACCAACCAGCGCCTaGGGCAGCACAGAGGAGGTACAGATAATATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: MVFSSYSRPTSA*GSTEEVQIISM Trigger: CATGGATATTATCTGTACCTCCTCTGTGCTGCCCAAGGCGCTGGTTGGTCTACTGTATGAAGAAAATACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084457.3 ENSMUST00000210973.3 |
||